CcUC04G071360 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G071360
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr04: 28106596 .. 28107636 (-)
RNA-Seq Expression	CcUC04G071360
Synteny	CcUC04G071360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGTGGAAAGAGAAATGGAGGGTTATCCAGAGTTTAGGAGAGAGGAGGGCTCCAAAAGCTTTGGTAATTGGTAGGAAACAAAGAATGATGATGATGAGAGAGAGAAGCGGCTTTTGGAGAACGCAAAGAGACGTAAGGGAATGGGAATGGCACAAGTTTAGGGAGATAATAAATTAATATAAAAATAAAACTGAAGATTGTGGTTTTTATACTCACGGGTGGGGCCCGCCTCCTCTTTCCAGTTTCTGCCTCACAAATAAATAATTTTTATTTTTAGCGCTTTACAAAAAGATAAATCTTTTGATAAATTGAAATTTAAGTTGTTAATTTGAGTTTAAGTAGTTAAACAAAATTATGAAATAATAACAATTTACTTATTTTTAAAATAAAAATTTAAATAAATAAACGGAGTAATTCAAACTAACCAAAAACAATTAAATTAAATCTAAAAAAATGCTCCAACCTACACCAATTCACTACGACCTCGTTTTTTTTGACACCATTTCATCTTTTGTTTTTTAAAATTAAGTCTATAAACATTAATTCCATTTCTAAATTTATTCCTTTGTTGCCTAGTTTTTACCTATTGTTTAAAAAACTAACCCAAATTTTAAAAACTATAAATAATAGCTCTTAAATTTTTGTTATTATTTTTAGAATGTGACTAAAAATGTAAAAGAAATAAACTTAATTAGAACAAAATAATTATGAAACAGGAGCTACATGAATGAATTGAATGGGGAGTGGGTTGAATAGAGGCGAATAGTATAGTAAGAAAAGAAGTTAATAGAAAAATAAAAAAAATAAGGATTGGTAATTGTGTATATAAATAATTAAGAAATATGGTAACATACCCGGAGAGATAGGGGAGAAAAGCATAGGAGGAGGGAAGCGAGTGAAGGAGGTGGGAAGTGTTTGGGGGATGGGATTGAGGTTACCTAAAGTAAAGCTAATGGGGGGAGTCGCCGCATTTTTCAGTGGGCCCCACCGGACATTCTTTCTTTTCGTCAAACGCCGTGGCCCCCACGCCACCTAA

mRNA sequence

ATGGCAAAGAAATGGAGGGTTATCCAGAGTTTAGGAGAGAGGAGGGCTCCAAAAGCTTTGGAAACAAAGAATGATGATGATGAGAGAGAGAAGCGGCTTTTGGAGAACGCAAAGAGACGTAAGGGAATGGGAATGGCACAAAAATATGGTAACATACCCGGAGAGATAGGGGAGAAAAGCATAGGAGGAGGGAAGCGAGTGAAGGAGGTGGGAAGTGTTTGGGGGATGGGATTGAGGTTACCTAAAGTAAAGCTAATGGGGGGAGTCGCCGCATTTTTCAGTGGGCCCCACCGGACATTCTTTCTTTTCGTCAAACGCCGTGGCCCCCACGCCACCTAA

Coding sequence (CDS)

ATGGCAAAGAAATGGAGGGTTATCCAGAGTTTAGGAGAGAGGAGGGCTCCAAAAGCTTTGGAAACAAAGAATGATGATGATGAGAGAGAGAAGCGGCTTTTGGAGAACGCAAAGAGACGTAAGGGAATGGGAATGGCACAAAAATATGGTAACATACCCGGAGAGATAGGGGAGAAAAGCATAGGAGGAGGGAAGCGAGTGAAGGAGGTGGGAAGTGTTTGGGGGATGGGATTGAGGTTACCTAAAGTAAAGCTAATGGGGGGAGTCGCCGCATTTTTCAGTGGGCCCCACCGGACATTCTTTCTTTTCGTCAAACGCCGTGGCCCCCACGCCACCTAA

Protein sequence

MAKKWRVIQSLGERRAPKALETKNDDDEREKRLLENAKRRKGMGMAQKYGNIPGEIGEKSIGGGKRVKEVGSVWGMGLRLPKVKLMGGVAAFFSGPHRTFFLFVKRRGPHAT

Homology

The following BLAST results are available for this feature:

BLAST of CcUC04G071360 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC04G071360 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC04G071360 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC04G071360 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G071360.1	CcUC04G071360.1	mRNA