CcUC04G070910 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAGAGTCAAAGAGCGGTTTAATTGATCCGGGTATTATCGAAGAGAGCGAGGAAAAACAAAAAGAAAGAAAAAATAAAAGAAAAAGAAGAAGATGGAAGAACGACCAACTCGTCAACCCTACATTGCCAAATGGAAGAAGAGAGATAATTAATAGACAGAAACAGAGGAATTAGGAAGGAGAAAATTCAAAGGAAATCCTAAGTATATAAATTGCGCGACAACAATTGCCGATACTTGTGGGTCCTAATGGAAAGTGCAGCGGCTGGCGTTGGTCTTGGCGCCGGAGAAGATGTTTCTTCTACCACTCTCTTTTCGTGGTGGAGCCATGCCGTTTCCCGGCGGTATCAGCACCTCCTCGATAGGTGTACCCCATACATCTTCTACCGTTGGGCCGCCTGCTTTTTCATTACCTTTATCTATGTCCTTCGGGTTTACCTCATCGAAGGATTCTACGTCGTCTCTTACGGTCTCGGAATTTACATCCTCAATCTTCTAATCGGCTTTCTCTCCCCTCAAGTGGATCCTGAGATCCTGGATCTCGATCAAGGCCCCGCGCTTCCTGTCAGGGAATCCGACGAGTTTCGCCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGGTGCGTCTAGGTTCCGATTGCTTACATTTTCCCCCCTCCCATTTTCTATTTGAGCCATTGCTGTGTCTTTCCATTGAATACATTCTGATATATATGTTCACCATGCGATCAGGAATCGATAGTGCAATTATGAATTGTCGAGGTTTGCTTAAGCTTTAGGATATGAGTAATTGTTGGATTGGCGTCACGAGCTCGTATGTTAATAATTGGGGTAGGAATTCTTTTGGCTTTTCACACATAGGATGTGTATTTGATTATGATTGGTGGTGGAATCTCTAGATGAATTTCGCGTTTGGTATTTCGTTTGTTTGCTAAATTTGATCTCATTTAATTTTGAGCCCAGAATTTGACCTTTTCAGAATCTGGCTTGTTGAACGAGATTAAAGTTATAGTGGTGCAGTCAGAAGTTGGTGGATATTCTTATATTTATATGAACTTGGTATATGTTAAAGGGTTGCACTTTCCACTTTGGGTTCTAGACTCCTGGCTAGCTCTTGACCTGTGTCAATGTCCAATAAGAGAGCCTTCTTTGCTCCCTCAACCGTCCGCCCAAGAAGTTATTTGATTAATATGGCTGTCCTTTGTACATCATTGGATTGAGAACCATGTTGCATAATTTCTCTGCCCTCTAGAATCTGGAGAAAAACCAAAAATAAAGAAAAGATCTTGGTGATGTTCCTTGTAACTTTAATTGAGCTAGTTGGTACTCATGGTAAGCACCTAAAAGATTCTGACCTAAAGATTATGATGATGTTTCCTGTAAAACATATTGGTACAATTACTGAGCATCTTAGCTTCATCATAGAATCTTGGGATTTTGATGTTTCTTTTTACAACGTTTCCAATTGTTTGCAGTTTTTCTTAACGTTGTTCTCAACCTTCATCTCCCACATTTATACAATTTTCTGCAGCATTAGAACTATTGGATAGGATTGATCCTTAAGCTGTTAAACCTTGAATTTTAATCCCCAAAACAAAAATACTCGAAAAAAGGTTTCCCATAATGCAATATTATCAGGAAATCCTCTGTTTATTTGCATACTGAATGCCTAATATACTAAAAGTTCTTCATAAAAAGGAATATCTCACATCAAACTTAATGAAATAGAAAGAAGATTCCATAGACTTGAATTGAGCTATATCCTTATTATGGAGTTGTTTGCCAATGGTTATAATGGGGCATGTAGACATTCGATCCAGTGGTAATTGTGGACAACCACATTATAGCTGCCTCATCCAATAATATTTCTTGTTTAAGCTTGTAGATCAAAATAACCATTGAGAAAAATACTAACTTTTGGTAATGTTTCCTTCCTTTCCTCTTTGAAGGTACTCTATCACAAAAGCCTTTTGTATTGCTTTTGTGATGACATTCTTCAGTGCATTTGATGTGCCTGTATTTTGGCCTATCCTTCTATTTTACTGGGTGGTGCTGTTCACTCTCACCATGCGGAGACAGATAGCGCACATGATAAAATATAAATATGTCCCGTTCTCTTTTGGTAAACAGGTAAATCTCTTTTCAGAGTCTGTGTTTTCTCAGTTTCCTTAGTTTTCCATCCTTCATGTTATTGCAATTATAAACGAACAATTTTCTCTAATTCTTGATAGCGATATGATGGAAAGGCTGCTGCTCCAAGCGACACCAAGAGCCTTCTGAAGGATTGAACTATTTGGGTAGATTAGTAATAGTAATTGTTCCTGTTAAGTAGTAGAACTGGTGAACTTTTTTTTCATTCTGCTGTACTTGTTCATAGTTGGTTCTACATGAGGAGAAGGCGGTAAGAGATAATTGTAATGAAGATAAGTTAGGCTGATCATCTGTTGGTTCTTCATTCCCCCTGATCTTTGTACTTCTTTGGATGTTCCTATGGAAAATCAAGTTTCAGGAAGATAGTAATGGTTGCTGAATTGTTCCCTTCTCTCCATGACATATTTTTTCAGTTGTAAAGATGGAAAAATTACTGTAATCTCAA CGAAGAGTCAAAGAGCGGTTTAATTGATCCGGGTATTATCGAAGAGAGCGAGGAAAAACAAAAAGAAAGAAAAAATAAAAGAAAAAGAAGAAGATGGAAGAACGACCAACTCGTCAACCCTACATTGCCAAATGGAAGAAGAGAGATAATTAATAGACAGAAACAGAGGAATTAGGAAGGAGAAAATTCAAAGGAAATCCTAAGTATATAAATTGCGCGACAACAATTGCCGATACTTGTGGGTCCTAATGGAAAGTGCAGCGGCTGGCGTTGGTCTTGGCGCCGGAGAAGATGTTTCTTCTACCACTCTCTTTTCGTGGTGGAGCCATGCCGTTTCCCGGCGGTATCAGCACCTCCTCGATAGGTGTACCCCATACATCTTCTACCGTTGGGCCGCCTGCTTTTTCATTACCTTTATCTATGTCCTTCGGGTTTACCTCATCGAAGGATTCTACGTCGTCTCTTACGGTCTCGGAATTTACATCCTCAATCTTCTAATCGGCTTTCTCTCCCCTCAAGTGGATCCTGAGATCCTGGATCTCGATCAAGGCCCCGCGCTTCCTGTCAGGGAATCCGACGAGTTTCGCCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGGTACTCTATCACAAAAGCCTTTTGTATTGCTTTTGTGATGACATTCTTCAGTGCATTTGATGTGCCTGTATTTTGGCCTATCCTTCTATTTTACTGGGTGGTGCTGTTCACTCTCACCATGCGGAGACAGATAGCGCACATGATAAAATATAAATATGTCCCGTTCTCTTTTGGTAAACAGCGATATGATGGAAAGGCTGCTGCTCCAAGCGACACCAAGAGCCTTCTGAAGGATTGAACTATTTGGGTAGATTAGTAATAGTAATTGTTCCTGTTAAGTAGTAGAACTGGTGAACTTTTTTTTCATTCTGCTGTACTTGTTCATAGTTGGTTCTACATGAGGAGAAGGCGGTAAGAGATAATTGTAATGAAGATAAGTTAGGCTGATCATCTGTTGGTTCTTCATTCCCCCTGATCTTTGTACTTCTTTGGATGTTCCTATGGAAAATCAAGTTTCAGGAAGATAGTAATGGTTGCTGAATTGTTCCCTTCTCTCCATGACATATTTTTTCAGTTGTAAAGATGGAAAAATTACTGTAATCTCAA ATGGAAAGTGCAGCGGCTGGCGTTGGTCTTGGCGCCGGAGAAGATGTTTCTTCTACCACTCTCTTTTCGTGGTGGAGCCATGCCGTTTCCCGGCGGTATCAGCACCTCCTCGATAGGTGTACCCCATACATCTTCTACCGTTGGGCCGCCTGCTTTTTCATTACCTTTATCTATGTCCTTCGGGTTTACCTCATCGAAGGATTCTACGTCGTCTCTTACGGTCTCGGAATTTACATCCTCAATCTTCTAATCGGCTTTCTCTCCCCTCAAGTGGATCCTGAGATCCTGGATCTCGATCAAGGCCCCGCGCTTCCTGTCAGGGAATCCGACGAGTTTCGCCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGGTACTCTATCACAAAAGCCTTTTGTATTGCTTTTGTGATGACATTCTTCAGTGCATTTGATGTGCCTGTATTTTGGCCTATCCTTCTATTTTACTGGGTGGTGCTGTTCACTCTCACCATGCGGAGACAGATAGCGCACATGATAAAATATAAATATGTCCCGTTCTCTTTTGGTAAACAGCGATATGATGGAAAGGCTGCTGCTCCAAGCGACACCAAGAGCCTTCTGAAGGATTGA MESAAAGVGLGAGEDVSSTTLFSWWSHAVSRRYQHLLDRCTPYIFYRWAACFFITFIYVLRVYLIEGFYVVSYGLGIYILNLLIGFLSPQVDPEILDLDQGPALPVRESDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIAHMIKYKYVPFSFGKQRYDGKAAAPSDTKSLLKD Homology
BLAST of CcUC04G070910 vs. NCBI nr
Match: XP_038880923.1 (protein RER1A-like [Benincasa hispida] >XP_038880924.1 protein RER1A-like [Benincasa hispida]) HSP 1 Score: 375.6 bits (963), Expect = 2.8e-100 Identity = 188/203 (92.61%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of CcUC04G070910 vs. NCBI nr
Match: XP_022949760.1 (protein RER1A-like [Cucurbita moschata] >XP_022949761.1 protein RER1A-like [Cucurbita moschata] >KAG6604161.1 Protein RER1A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 371.3 bits (952), Expect = 5.3e-99 Identity = 185/203 (91.13%), Postives = 190/203 (93.60%), Query Frame = 0
BLAST of CcUC04G070910 vs. NCBI nr
Match: XP_023544323.1 (protein RER1A-like [Cucurbita pepo subsp. pepo] >XP_023544324.1 protein RER1A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 370.9 bits (951), Expect = 6.9e-99 Identity = 186/203 (91.63%), Postives = 191/203 (94.09%), Query Frame = 0
BLAST of CcUC04G070910 vs. NCBI nr
Match: XP_022977598.1 (protein RER1A-like [Cucurbita maxima] >XP_022977599.1 protein RER1A-like [Cucurbita maxima]) HSP 1 Score: 370.5 bits (950), Expect = 9.0e-99 Identity = 185/203 (91.13%), Postives = 191/203 (94.09%), Query Frame = 0
BLAST of CcUC04G070910 vs. NCBI nr
Match: KAG7034324.1 (Protein RER1A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 368.6 bits (945), Expect = 3.4e-98 Identity = 184/203 (90.64%), Postives = 189/203 (93.10%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy Swiss-Prot
Match: O48670 (Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.3e-65 Identity = 121/183 (66.12%), Postives = 144/183 (78.69%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy Swiss-Prot
Match: Q9ZWI7 (Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.3e-60 Identity = 112/171 (65.50%), Postives = 138/171 (80.70%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy Swiss-Prot
Match: O48671 (Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2) HSP 1 Score: 233.0 bits (593), Expect = 2.9e-60 Identity = 118/181 (65.19%), Postives = 137/181 (75.69%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy Swiss-Prot
Match: O15258 (Protein RER1 OS=Homo sapiens OX=9606 GN=RER1 PE=1 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 7.2e-51 Identity = 94/162 (58.02%), Postives = 128/162 (79.01%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy Swiss-Prot
Match: Q5R5U4 (Protein RER1 OS=Pongo abelii OX=9601 GN=RER1 PE=2 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 7.2e-51 Identity = 94/162 (58.02%), Postives = 128/162 (79.01%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy TrEMBL
Match: A0A6J1GCX4 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111453051 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.5e-99 Identity = 185/203 (91.13%), Postives = 190/203 (93.60%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy TrEMBL
Match: A0A6J1IRU9 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111477878 PE=3 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 4.3e-99 Identity = 185/203 (91.13%), Postives = 191/203 (94.09%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy TrEMBL
Match: A0A6J1HHE0 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111463557 PE=3 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 7.7e-96 Identity = 182/204 (89.22%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy TrEMBL
Match: A0A6J1KTW6 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111497178 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.7e-95 Identity = 181/204 (88.73%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of CcUC04G070910 vs. ExPASy TrEMBL
Match: A0A6J1BTU8 (Protein RER1 OS=Momordica charantia OX=3673 GN=LOC111005301 PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.2e-94 Identity = 179/205 (87.32%), Postives = 188/205 (91.71%), Query Frame = 0
BLAST of CcUC04G070910 vs. TAIR 10
Match: AT4G39220.1 (Rer1 family protein ) HSP 1 Score: 250.0 bits (637), Expect = 1.6e-66 Identity = 121/183 (66.12%), Postives = 144/183 (78.69%), Query Frame = 0
BLAST of CcUC04G070910 vs. TAIR 10
Match: AT2G23310.1 (Rer1 family protein ) HSP 1 Score: 234.2 bits (596), Expect = 9.4e-62 Identity = 112/171 (65.50%), Postives = 138/171 (80.70%), Query Frame = 0
BLAST of CcUC04G070910 vs. TAIR 10
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B ) HSP 1 Score: 233.0 bits (593), Expect = 2.1e-61 Identity = 118/181 (65.19%), Postives = 137/181 (75.69%), Query Frame = 0
BLAST of CcUC04G070910 vs. TAIR 10
Match: AT2G23310.2 (Rer1 family protein ) HSP 1 Score: 229.9 bits (585), Expect = 1.8e-60 Identity = 111/171 (64.91%), Postives = 136/171 (79.53%), Query Frame = 0
BLAST of CcUC04G070910 vs. TAIR 10
Match: AT2G18240.1 (Rer1 family protein ) HSP 1 Score: 193.0 bits (489), Expect = 2.4e-49 Identity = 98/160 (61.25%), Postives = 118/160 (73.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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