![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC04G070530 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAGTGATAAAAACCAATTCATTTAACCATTTTGTATTTGGAGAGAGGGGAAGGGGTAAGGGGGAGACAATGGAAGATTAGACAATGGGGAGAAAGTTGTATAGAAGAAAAGGTGAAAACTCAAAGAACTCTCTAAACCCCAAACCCCAAATCCCAAATCAAACAATGCCTCTTCAAATTGAGGCAAACCCAATGAACACAGACAGCCATACACAAGATTTTCTACTCTTTTCACCCATCTTTCCTACAAACGATTTTATTTTTTAATTTTACTTTTCCATTTCATTTCATTTCATGCATACATATATACTTATATATTTTTGTTAGTTCTCTTCACCCAATTCTTCTTCTCTTGGATTTTCTTAAGCAAATAGAAAAGGACTTTGGTTTTCTTGGTGGGTTTCCTCTCTTCTTCGATTCTGTTACGTCTTTGGGTTGTTCTGTACTGCTATATACAGAAGGATGCGCAACATGGGGAGTTCAAGCTCTAGCCGTGGTATCGCCGCCATTGTTGGTGTTGGCCCGAAGCTCGGCCGTTCTATCGCTCGTAAGTTCGCCCACGAAGGCTACACCGTCGCTATTCTCGCCAGAGACTTGGGTATGTACTATTATATCAATTTAAATTTACGAGGTTGAAATTGGGGATGTGGGTGGGATTGTAATTGGTGTCAAATTTTTGTGTAATTACGTTTTCAGGTAGATTATCGAGATTTGCGGATGAGATTGCAAGGGAAGAGAAGGCCCAAGTGTTTGCGATTCGAATAGATTGTTCGGACTCGAGGAGTGTGAGGGAAGCATTTGAAGGCGTATTGTCTCTGGGATTTGTAGAGGTTTTGATTTACAATGCAAATCAACAAGTTTCAAGGCAGCCCACAAGATTCATCGATGTTCGTATTGATTCATTTGAGAAATCTCTCGCTGTTTCTTCAGTGGGTGCTTTCCATTGTTCCCAACAGGTACACACACACACACACAAATCTCCCTCTCTTCTCCCCCATTTCCATTTTCTTCATTTTCCCAGAAAAATCAAACGAAAAGGGGCTCTAGAACTTTGTGTAAAAACGAATTTCAATTTGTTTTGGGAAATTGTAGGTTATTCCGGGGATGGTGGAAAGAGGAAGAGGTACAATTCTCTTTACAGGCTGCTCAGCTTCTTTGAATGGCGTTGCTGGTTTCTCTGACCTTTGTGAGTTCTGCACTCTAAACATTCTCTCTGTGTTTCTGTTGAGATTTACTATGTTTTTGTACATCAGAAGACCTTTACAACCAATCAATTTGCAAAACTCTGTGATCATAATCGTAAAATTAGAGAAGGAAATTGGAGTTGAAATTTGTTTTGATTTGGATAGGTTGTGGAAAATTTGCATTAAGGGCATTATCTCAGTGCTTGGCCAGAGAGCTTCAACCCCTTGGAATACACGTCGCCCATATCATAATTGATGGTCTCATTGGCCCACCAAGGTTTTCATTTCTTCTTCTTCTTCTTCTTCATCTTTCCCAACTCTCTAGAATCCGATACTCCAATATTTTTTTCCCCTTATTTTCTGACCATCCAAACAGAATTTCCCAGATTCTCTGAAAAAAAAAAAAGAAAAAACAACCCAAATAAGAATTGATATGATGAAACAATGATGTGTTGCAGGACAAGTCCAATAACATCTCATAGAGGAGGATCATCTTCATCATCGTCATCATCATCGTCATCATCAGTTGGATCGCATTTACAAAGTGGAATTGGAGAAGGGACTATGGACCCAGATGCGCTGGCTCAGACTTATTGGCACTTGCATCTTCAGGACCGTACTGCTTGGACCCAAGAAATTGATTTACGACCTTCAAATCCCAGATTGTTCTAGTTCCTCCTCTTTTCTTTTTACACTAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAGAAAAAAAACAGCATATCATTAAATGGAGAAGTCGCCATTCTTCTGTGGTTGAGCTGACCCAGCCAGACCCACATTTCTCTTTCCTTTTTAATATTCTGTCACAAACCCCCCAAGGGCTCACACCCAATCATTTTGCTTCATGGATGTGTCTTTCTGAATTCCCCCACCTTGCTGGTCAAAAATCCAAGCTTACCTCTCAAAAATGATCCACTGGGAAGCATCAAACTTAGTTTGGCTTAGCTATTGTGTAATGAAATGTGGGGGGTGAATTTTATTTGGTTGTCTTTAGGAAGTGACTGCTGGTTTTTGTATATATAATGTTGTTGAGATTGGATTGATTGATTCTTATTATTATATGATTGAATGGGTTTTTGTTATGATATGAATGATAGAATTATTTGGTGATGTGATGGTGATTAGGTCTATCTGTCCTCCATGAGAGCTTAGGCTTTGGGCCCATTAATATACGACAGGGTGGGGTC AAAAGAGTGATAAAAACCAATTCATTTAACCATTTTGTATTTGGAGAGAGGGGAAGGGGTAAGGGGGAGACAATGGAAGATTAGACAATGGGGAGAAAGTTGTATAGAAGAAAAGGTGAAAACTCAAAGAACTCTCTAAACCCCAAACCCCAAATCCCAAATCAAACAATGCCTCTTCAAATTGAGGCAAACCCAATGAACACAGACAGCCATACACAAGATTTTCTACTCTTTTCACCCATCTTTCCTACAAACGATTTTATTTTTTAATTTTACTTTTCCATTTCATTTCATTTCATGCATACATATATACTTATATATTTTTGTTAGTTCTCTTCACCCAATTCTTCTTCTCTTGGATTTTCTTAAGCAAATAGAAAAGGACTTTGGTTTTCTTGGTGGGTTTCCTCTCTTCTTCGATTCTGTTACGTCTTTGGGTTGTTCTGTACTGCTATATACAGAAGGATGCGCAACATGGGGAGTTCAAGCTCTAGCCGTGGTATCGCCGCCATTGTTGGTGTTGGCCCGAAGCTCGGCCGTTCTATCGCTCGTAAGTTCGCCCACGAAGGCTACACCGTCGCTATTCTCGCCAGAGACTTGGGTAGATTATCGAGATTTGCGGATGAGATTGCAAGGGAAGAGAAGGCCCAAGTGTTTGCGATTCGAATAGATTGTTCGGACTCGAGGAGTGTGAGGGAAGCATTTGAAGGCGTATTGTCTCTGGGATTTGTAGAGGTTTTGATTTACAATGCAAATCAACAAGTTTCAAGGCAGCCCACAAGATTCATCGATGTTCGTATTGATTCATTTGAGAAATCTCTCGCTGTTTCTTCAGTGGGTGCTTTCCATTGTTCCCAACAGGTTATTCCGGGGATGGTGGAAAGAGGAAGAGGTACAATTCTCTTTACAGGCTGCTCAGCTTCTTTGAATGGCGTTGCTGGTTTCTCTGACCTTTGTTGTGGAAAATTTGCATTAAGGGCATTATCTCAGTGCTTGGCCAGAGAGCTTCAACCCCTTGGAATACACGTCGCCCATATCATAATTGATGGTCTCATTGGCCCACCAAGGACAAGTCCAATAACATCTCATAGAGGAGGATCATCTTCATCATCGTCATCATCATCGTCATCATCAGTTGGATCGCATTTACAAAGTGGAATTGGAGAAGGGACTATGGACCCAGATGCGCTGGCTCAGACTTATTGGCACTTGCATCTTCAGGACCGTACTGCTTGGACCCAAGAAATTGATTTACGACCTTCAAATCCCAGATTGTTCTAGTTCCTCCTCTTTTCTTTTTACACTAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAGAAAAAAAACAGCATATCATTAAATGGAGAAGTCGCCATTCTTCTGTGGTTGAGCTGACCCAGCCAGACCCACATTTCTCTTTCCTTTTTAATATTCTGTCACAAACCCCCCAAGGGCTCACACCCAATCATTTTGCTTCATGGATGTGTCTTTCTGAATTCCCCCACCTTGCTGGTCAAAAATCCAAGCTTACCTCTCAAAAATGATCCACTGGGAAGCATCAAACTTAGTTTGGCTTAGCTATTGTGTAATGAAATGTGGGGGGTGAATTTTATTTGGTTGTCTTTAGGAAGTGACTGCTGGTTTTTGTATATATAATGTTGTTGAGATTGGATTGATTGATTCTTATTATTATATGATTGAATGGGTTTTTGTTATGATATGAATGATAGAATTATTTGGTGATGTGATGGTGATTAGGTCTATCTGTCCTCCATGAGAGCTTAGGCTTTGGGCCCATTAATATACGACAGGGTGGGGTC ATGCGCAACATGGGGAGTTCAAGCTCTAGCCGTGGTATCGCCGCCATTGTTGGTGTTGGCCCGAAGCTCGGCCGTTCTATCGCTCGTAAGTTCGCCCACGAAGGCTACACCGTCGCTATTCTCGCCAGAGACTTGGGTAGATTATCGAGATTTGCGGATGAGATTGCAAGGGAAGAGAAGGCCCAAGTGTTTGCGATTCGAATAGATTGTTCGGACTCGAGGAGTGTGAGGGAAGCATTTGAAGGCGTATTGTCTCTGGGATTTGTAGAGGTTTTGATTTACAATGCAAATCAACAAGTTTCAAGGCAGCCCACAAGATTCATCGATGTTCGTATTGATTCATTTGAGAAATCTCTCGCTGTTTCTTCAGTGGGTGCTTTCCATTGTTCCCAACAGGTTATTCCGGGGATGGTGGAAAGAGGAAGAGGTACAATTCTCTTTACAGGCTGCTCAGCTTCTTTGAATGGCGTTGCTGGTTTCTCTGACCTTTGTTGTGGAAAATTTGCATTAAGGGCATTATCTCAGTGCTTGGCCAGAGAGCTTCAACCCCTTGGAATACACGTCGCCCATATCATAATTGATGGTCTCATTGGCCCACCAAGGACAAGTCCAATAACATCTCATAGAGGAGGATCATCTTCATCATCGTCATCATCATCGTCATCATCAGTTGGATCGCATTTACAAAGTGGAATTGGAGAAGGGACTATGGACCCAGATGCGCTGGCTCAGACTTATTGGCACTTGCATCTTCAGGACCGTACTGCTTGGACCCAAGAAATTGATTTACGACCTTCAAATCCCAGATTGTTCTAG MRNMGSSSSSRGIAAIVGVGPKLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKAQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLIYNANQQVSRQPTRFIDVRIDSFEKSLAVSSVGAFHCSQQVIPGMVERGRGTILFTGCSASLNGVAGFSDLCCGKFALRALSQCLARELQPLGIHVAHIIIDGLIGPPRTSPITSHRGGSSSSSSSSSSSSVGSHLQSGIGEGTMDPDALAQTYWHLHLQDRTAWTQEIDLRPSNPRLF Homology
BLAST of CcUC04G070530 vs. NCBI nr
Match: XP_038881263.1 (3-oxoacyl-[acyl-carrier-protein] reductase FabG [Benincasa hispida]) HSP 1 Score: 518.8 bits (1335), Expect = 2.7e-143 Identity = 266/271 (98.15%), Postives = 268/271 (98.89%), Query Frame = 0
BLAST of CcUC04G070530 vs. NCBI nr
Match: TYK12901.1 (3-ketodihydrosphingosine reductase [Cucumis melo var. makuwa]) HSP 1 Score: 514.2 bits (1323), Expect = 6.7e-142 Identity = 266/272 (97.79%), Postives = 270/272 (99.26%), Query Frame = 0
BLAST of CcUC04G070530 vs. NCBI nr
Match: XP_008440254.1 (PREDICTED: 3-ketodihydrosphingosine reductase [Cucumis melo]) HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141 Identity = 265/272 (97.43%), Postives = 270/272 (99.26%), Query Frame = 0
BLAST of CcUC04G070530 vs. NCBI nr
Match: XP_004141923.1 (uncharacterized protein LOC101218219 [Cucumis sativus] >KGN48510.1 hypothetical protein Csa_004023 [Cucumis sativus]) HSP 1 Score: 508.1 bits (1307), Expect = 4.8e-140 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CcUC04G070530 vs. NCBI nr
Match: XP_022962741.1 (uncharacterized protein LOC111463140 [Cucurbita moschata] >KAG6595047.1 3-ketodihydrosphingosine reductase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 497.3 bits (1279), Expect = 8.5e-137 Identity = 256/271 (94.46%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy Swiss-Prot
Match: Q2KIJ5 (3-ketodihydrosphingosine reductase OS=Bos taurus OX=9913 GN=KDSR PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.0e-12 Identity = 50/181 (27.62%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy Swiss-Prot
Match: P14802 (Uncharacterized oxidoreductase YoxD OS=Bacillus subtilis (strain 168) OX=224308 GN=yoxD PE=3 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 8.8e-12 Identity = 63/232 (27.16%), Postives = 107/232 (46.12%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy Swiss-Prot
Match: Q06136 (3-ketodihydrosphingosine reductase OS=Homo sapiens OX=9606 GN=KDSR PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 50/181 (27.62%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy Swiss-Prot
Match: Q6GV12 (3-ketodihydrosphingosine reductase OS=Mus musculus OX=10090 GN=Kdsr PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11 Identity = 50/181 (27.62%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy Swiss-Prot
Match: Q556J2 (3-ketodihydrosphingosine reductase OS=Dictyostelium discoideum OX=44689 GN=ksrA-1 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08 Identity = 60/244 (24.59%), Postives = 112/244 (45.90%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy TrEMBL
Match: A0A5D3CM56 (3-ketodihydrosphingosine reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004950 PE=4 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142 Identity = 266/272 (97.79%), Postives = 270/272 (99.26%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy TrEMBL
Match: A0A1S3B0A0 (3-ketodihydrosphingosine reductase OS=Cucumis melo OX=3656 GN=LOC103484765 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 7.2e-142 Identity = 265/272 (97.43%), Postives = 270/272 (99.26%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy TrEMBL
Match: A0A0A0KFR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490250 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy TrEMBL
Match: A0A6J1HE22 (uncharacterized protein LOC111463140 OS=Cucurbita moschata OX=3662 GN=LOC111463140 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137 Identity = 256/271 (94.46%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CcUC04G070530 vs. ExPASy TrEMBL
Match: A0A6J1KQQ3 (uncharacterized protein LOC111497403 OS=Cucurbita maxima OX=3661 GN=LOC111497403 PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 5.4e-137 Identity = 255/271 (94.10%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CcUC04G070530 vs. TAIR 10
Match: AT3G50560.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 360.1 bits (923), Expect = 1.5e-99 Identity = 188/271 (69.37%), Postives = 217/271 (80.07%), Query Frame = 0
BLAST of CcUC04G070530 vs. TAIR 10
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-07 Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 0
BLAST of CcUC04G070530 vs. TAIR 10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.4e-04 Identity = 55/199 (27.64%), Postives = 86/199 (43.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|