CcUC04G068720 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCGAAAAAACAGTGGAGCAGCAACGCCAAAGCTTGACCTGAAACTGAATTTATCGCCGCCGAGAGCGAACAGAGGAGTGGAATCACCGAGCCGGTCTGCCACGGTGTCGCCGACGTCGCCGCCGAGCTCGTGTGTGTCGTCGGAGGAAGAGATGGCGGCGGCGGTGAGATACTCAAACAGCCCTGAAGCAACGTCGATGATGCTGGTGGGTTGCCCACGTTGTCTGATGTATGTTATGTTGTCGGAAGAAGATCCCAAATGTCCCAAATGCAAAAGCACTGTTCTTCTCGATGTTCTTCATGATAACGCCGCCGTCAAAACCACGAAAAACTAG ATGAATCGAAAAAACAGTGGAGCAGCAACGCCAAAGCTTGACCTGAAACTGAATTTATCGCCGCCGAGAGCGAACAGAGGAGTGGAATCACCGAGCCGGTCTGCCACGGTGTCGCCGACGTCGCCGCCGAGCTCGTGTGTGTCGTCGGAGGAAGAGATGGCGGCGGCGGTGAGATACTCAAACAGCCCTGAAGCAACGTCGATGATGCTGGTGGGTTGCCCACGTTGTCTGATGTATGTTATGTTGTCGGAAGAAGATCCCAAATGTCCCAAATGCAAAAGCACTGTTCTTCTCGATGTTCTTCATGATAACGCCGCCGTCAAAACCACGAAAAACTAG ATGAATCGAAAAAACAGTGGAGCAGCAACGCCAAAGCTTGACCTGAAACTGAATTTATCGCCGCCGAGAGCGAACAGAGGAGTGGAATCACCGAGCCGGTCTGCCACGGTGTCGCCGACGTCGCCGCCGAGCTCGTGTGTGTCGTCGGAGGAAGAGATGGCGGCGGCGGTGAGATACTCAAACAGCCCTGAAGCAACGTCGATGATGCTGGTGGGTTGCCCACGTTGTCTGATGTATGTTATGTTGTCGGAAGAAGATCCCAAATGTCCCAAATGCAAAAGCACTGTTCTTCTCGATGTTCTTCATGATAACGCCGCCGTCAAAACCACGAAAAACTAG MNRKNSGAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMAAAVRYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN Homology
BLAST of CcUC04G068720 vs. NCBI nr
Match: XP_004143338.1 (uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacterized protein E6C27_scaffold541G00770 [Cucumis melo var. makuwa] >KGN48289.1 hypothetical protein Csa_003966 [Cucumis sativus]) HSP 1 Score: 195.3 bits (495), Expect = 2.9e-46 Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of CcUC04G068720 vs. NCBI nr
Match: XP_008462606.1 (PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45 Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0
BLAST of CcUC04G068720 vs. NCBI nr
Match: XP_022925998.1 (uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034480.1 hypothetical protein SDJN02_04209, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191.8 bits (486), Expect = 3.2e-45 Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of CcUC04G068720 vs. NCBI nr
Match: XP_023543892.1 (uncharacterized protein LOC111803624 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.4 bits (485), Expect = 4.1e-45 Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of CcUC04G068720 vs. NCBI nr
Match: XP_022979077.1 (uncharacterized protein LOC111478822 [Cucurbita maxima]) HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44 Identity = 101/118 (85.59%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.2e-33 Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22 Identity = 62/110 (56.36%), Postives = 73/110 (66.36%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-09 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy TrEMBL
Match: A0A5A7SGG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00770 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46 Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy TrEMBL
Match: A0A0A0KHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46 Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy TrEMBL
Match: A0A1S3CHA8 (uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.9e-46 Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy TrEMBL
Match: A0A6J1EGT8 (uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC111433248 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45 Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of CcUC04G068720 vs. ExPASy TrEMBL
Match: A0A6J1IMT5 (uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 5.8e-45 Identity = 101/118 (85.59%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of CcUC04G068720 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-34 Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 0
BLAST of CcUC04G068720 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23 Identity = 62/110 (56.36%), Postives = 73/110 (66.36%), Query Frame = 0
BLAST of CcUC04G068720 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 2.1e-10 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 0
BLAST of CcUC04G068720 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06 Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of CcUC04G068720 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 2.9e-04 Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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