![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC04G068030 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACTATAAACCTTTTCGTTTTCCCCAAAAAGTCAAGTATTCTGTATTCCCTAACACCTTCCTTCTTCTCTCTGTTTTTTGGAACAAGACAAAAAATAGAACCCTTCTCTTCTACTCTTATCTTCCACGCCTAACTAATCTAATTTATAAAACCATTGGCCCTTCATATATATATATATATATATATATATTCTTCCCATCTTCTTCTTTGTTGTGGTCCATTTGGCTTCATCTTCCAGTTACTCAAAACAGAGAGGTCTGTGAAAAGAAAACATATGGAGTGGAATAATGGCAAAACTTTCACTCCTAACTTTGTTTCTCCACCACCACATTCTTCTTCCTCTGCTTTGCTCTACAACTGCAGCAACTACAACTGCAATTTCGATCACTTCCCTGGTAAACCAACTCATACATATTAATTATTATATTCTTTCTTCTTTTTCTTTTACGAAACCTAATCTTTCTCCCTATAAACCCTATTTCTTATAGTGTTCCAAAATAGGGTTTAGGGTTTGTATTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTAATACTACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGTTGCTTGTGGAGAGGTATTAGCATTCAATGTACAAGAGTTTAAATACAAGATATTTCCCCTTACCTACAACATTCTTAAATCGAGATGAATTAAACTCAAAATACAAAATTTCGGTTTGATTTGATACCCATTTTGGTTTTTTATTTTTTATTTTTTATTTTTTTAAAATTGTGCTGGTTTGCGCACCAATTTCTGACAACCTTTTCATATTCCTTTCGTTACATGTTTTAATTCTAATTCTAAGCCAAAATCAAATTTTTAAGACCCCTGTTTATAACCTCTTCGGGTTTGCAATTTCTTTGCAATAATTTCCTTAATGTAGCATTTGAACTATTAACCTAATTTCAAAAACCACAAAAGCAAATTTGTATTCAGTTTTTGGCTAACTTTTGCATTACGACAATTTTCATTTTTTTTTCCTTGGTGCAACATTTGAATTCTTAACTAAATTCTCAACATTTGAATTCTTAACTAAATTCTAAAAAGAAAGTAAATTTTTTTTTTTTTAGGTTTCAAAGCGAAAACATTGTTAGAGTGGTAGATAAAGAAATAAAGAAACTCATAGGTACAATTAGGGTTCTCGAATTAATTTAACAAACTAAGCAAGAAGATACTTGAGCTAATTAAGCGTAGGTGATCATTGAGAATTGATTTCCAAAAACTAATAAAATGATTATGAAACAGAAGTGATTGATATTCTTAACCTTTCAGTTCAATCAGTGATGGAGACGACGACGGCGAAGAAAGTGGCGGTGGAAGGTGAACAAAGCGTGGTTGGAGGAGTGGATCAAAAGAAGAAGAGATTGAGTCAGGATCAGTTGGAGGCATTAGAGAGAAGCTTTCAAGAGGAAGTGAAGCTTGATCCTGATAGAAAAATGAAGCTATCAAAGGAACTTGGGCTCCAACCAAGACAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGCTGGAAAACTAAGCAGCTTGAGCATCTCTATGATACTCTCAAACAACAATTTGATACTATCTCTAAGGAAAAACATAACCTTCAACAAGAGGTTTCTATTTCTAATCTTTCATCTTTAGTACCCTACCTTTCATTTTCAATATTATTCTATACAAATTTTGGATCACCCATCACACGATACTTTCATATTTTTATTGTTAGCTTATCACGAGTGTAGATATAATTTAATTAAAGCATGTTTGGGAGTGATTCTAAAATGATTATAATCGACTTTGTCGTTTTTAAAATCATTATGAAATATGTTTTTAATGATTCAAAACCAATTTTGACAAAATGAAAATTGAAGTTAAAAGTGTAAAATTAAATATTAAAAATTAATATTTAGAGATTAAAACTGCGTTTTGGAGTGTGACAAAAGTGATTTGATTTTAACCATTTTCAAAACCACTCTTAAATATGTTGTTAATGACGATCCTGAAAAGATTGTAAAGATAATTTAAGGTATACTTGAAAGGGCTCAATCCATGAGTTACATTGAATTGAAATTAGCATTAATGAATCATTGTCACTAAAAGAGCTTAGTTAGGCTAAATTGGTAAAAGACAAGGTCAATCGCATCTTCTACATTCTTTGACATAAAATCATGCAAAGCAAAATCCCATGAAGCCTTGGAAGTATTGCTTATATATAAACAATGACCTAAAGAACTTCTTGAAATTTTCAAACATTTCAAAGGAAGGATATTATATTATACCCTATTATATCCATAAAAATATTGATGGACTAATTAATGCATTTAATTGAACTTGTGTAGGGATGCACGTTAATCTTAAAAGCTTGGCAAGAAGTTCCTCGTTAACTTAAGCTTTTGAATTGTTCGATATAGGTGATAAAACTAAGAAGCATGCTAAGAGAACAAGCAACGAGGAATCAATGGTCGGTAGGTTACACGGATGTCTCCGGGGAAGAGACGACGGTGGAATGCACGTCGGTTGAGATTCTGAGCTGTAACAATTACATCTACAATAATGTGGAAGATTTCAACCAAATATCAGCTTCAGCTCCTCCATTCTGGTGGGGTGCTGAGGCTACTCACCTGCCTTCTTATCCTTAGGCTTTCTCAAGGGCTACTTATTAGTTTTGGCTTAGAAATTTGCATTAACTTTTCTTACCCTTTGATGATCAAAAAGACAGAGTTTGATGTCATGTGTGTTGAATATTCT AAACTATAAACCTTTTCGTTTTCCCCAAAAAGTCAAGTATTCTGTATTCCCTAACACCTTCCTTCTTCTCTCTGTTTTTTGGAACAAGACAAAAAATAGAACCCTTCTCTTCTACTCTTATCTTCCACGCCTAACTAATCTAATTTATAAAACCATTGGCCCTTCATATATATATATATATATATATATATTCTTCCCATCTTCTTCTTTGTTGTGGTCCATTTGGCTTCATCTTCCAGTTACTCAAAACAGAGAGGTCTGTGAAAAGAAAACATATGGAGTGGAATAATGGCAAAACTTTCACTCCTAACTTTGTTTCTCCACCACCACATTCTTCTTCCTCTGCTTTGCTCTACAACTGCAGCAACTACAACTGCAATTTCGATCACTTCCCTGAAGTGATTGATATTCTTAACCTTTCAGTTCAATCAGTGATGGAGACGACGACGGCGAAGAAAGTGGCGGTGGAAGGTGAACAAAGCGTGGTTGGAGGAGTGGATCAAAAGAAGAAGAGATTGAGTCAGGATCAGTTGGAGGCATTAGAGAGAAGCTTTCAAGAGGAAGTGAAGCTTGATCCTGATAGAAAAATGAAGCTATCAAAGGAACTTGGGCTCCAACCAAGACAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGCTGGAAAACTAAGCAGCTTGAGCATCTCTATGATACTCTCAAACAACAATTTGATACTATCTCTAAGGAAAAACATAACCTTCAACAAGAGGTGATAAAACTAAGAAGCATGCTAAGAGAACAAGCAACGAGGAATCAATGGTCGGTAGGTTACACGGATGTCTCCGGGGAAGAGACGACGGTGGAATGCACGTCGGTTGAGATTCTGAGCTGTAACAATTACATCTACAATAATGTGGAAGATTTCAACCAAATATCAGCTTCAGCTCCTCCATTCTGGTGGGGTGCTGAGGCTACTCACCTGCCTTCTTATCCTTAGGCTTTCTCAAGGGCTACTTATTAGTTTTGGCTTAGAAATTTGCATTAACTTTTCTTACCCTTTGATGATCAAAAAGACAGAGTTTGATGTCATGTGTGTTGAATATTCT ATGGAGTGGAATAATGGCAAAACTTTCACTCCTAACTTTGTTTCTCCACCACCACATTCTTCTTCCTCTGCTTTGCTCTACAACTGCAGCAACTACAACTGCAATTTCGATCACTTCCCTGAAGTGATTGATATTCTTAACCTTTCAGTTCAATCAGTGATGGAGACGACGACGGCGAAGAAAGTGGCGGTGGAAGGTGAACAAAGCGTGGTTGGAGGAGTGGATCAAAAGAAGAAGAGATTGAGTCAGGATCAGTTGGAGGCATTAGAGAGAAGCTTTCAAGAGGAAGTGAAGCTTGATCCTGATAGAAAAATGAAGCTATCAAAGGAACTTGGGCTCCAACCAAGACAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGCTGGAAAACTAAGCAGCTTGAGCATCTCTATGATACTCTCAAACAACAATTTGATACTATCTCTAAGGAAAAACATAACCTTCAACAAGAGGTGATAAAACTAAGAAGCATGCTAAGAGAACAAGCAACGAGGAATCAATGGTCGGTAGGTTACACGGATGTCTCCGGGGAAGAGACGACGGTGGAATGCACGTCGGTTGAGATTCTGAGCTGTAACAATTACATCTACAATAATGTGGAAGATTTCAACCAAATATCAGCTTCAGCTCCTCCATTCTGGTGGGGTGCTGAGGCTACTCACCTGCCTTCTTATCCTTAG MEWNNGKTFTPNFVSPPPHSSSSALLYNCSNYNCNFDHFPEVIDILNLSVQSVMETTTAKKVAVEGEQSVVGGVDQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVIKLRSMLREQATRNQWSVGYTDVSGEETTVECTSVEILSCNNYIYNNVEDFNQISASAPPFWWGAEATHLPSYP Homology
BLAST of CcUC04G068030 vs. NCBI nr
Match: XP_004143373.2 (homeobox-leucine zipper protein ATHB-22 isoform X1 [Cucumis sativus] >KGN48225.1 hypothetical protein Csa_003985 [Cucumis sativus]) HSP 1 Score: 346.7 bits (888), Expect = 1.6e-91 Identity = 193/238 (81.09%), Postives = 202/238 (84.87%), Query Frame = 0
BLAST of CcUC04G068030 vs. NCBI nr
Match: XP_031742621.1 (homeobox-leucine zipper protein ATHB-22 isoform X2 [Cucumis sativus]) HSP 1 Score: 344.7 bits (883), Expect = 6.1e-91 Identity = 192/238 (80.67%), Postives = 201/238 (84.45%), Query Frame = 0
BLAST of CcUC04G068030 vs. NCBI nr
Match: XP_038883822.1 (homeobox-leucine zipper protein ATHB-22-like [Benincasa hispida]) HSP 1 Score: 339.3 bits (869), Expect = 2.5e-89 Identity = 189/240 (78.75%), Postives = 200/240 (83.33%), Query Frame = 0
BLAST of CcUC04G068030 vs. NCBI nr
Match: XP_008462523.1 (PREDICTED: homeobox-leucine zipper protein ATHB-22-like [Cucumis melo]) HSP 1 Score: 335.1 bits (858), Expect = 4.8e-88 Identity = 185/238 (77.73%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of CcUC04G068030 vs. NCBI nr
Match: XP_031742623.1 (putative homeobox-leucine zipper protein ATHB-51 isoform X4 [Cucumis sativus]) HSP 1 Score: 304.3 bits (778), Expect = 9.1e-79 Identity = 162/183 (88.52%), Postives = 169/183 (92.35%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy Swiss-Prot
Match: Q9LZR0 (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2) HSP 1 Score: 148.7 bits (374), Expect = 8.3e-35 Identity = 102/227 (44.93%), Postives = 136/227 (59.91%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy Swiss-Prot
Match: Q4PSR7 (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 5.1e-32 Identity = 80/172 (46.51%), Postives = 119/172 (69.19%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23 Identity = 67/152 (44.08%), Postives = 102/152 (67.11%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.6e-23 Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.6e-23 Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy TrEMBL
Match: A0A0A0KET9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449320 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 7.7e-92 Identity = 193/238 (81.09%), Postives = 202/238 (84.87%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy TrEMBL
Match: A0A1S3CIQ6 (homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo OX=3656 GN=LOC103500861 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.3e-88 Identity = 185/238 (77.73%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy TrEMBL
Match: A0A5A7SJ21 (Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001530 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 7.5e-79 Identity = 159/186 (85.48%), Postives = 170/186 (91.40%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy TrEMBL
Match: A0A5D3CAN1 (Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00890 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.8e-78 Identity = 158/186 (84.95%), Postives = 170/186 (91.40%), Query Frame = 0
BLAST of CcUC04G068030 vs. ExPASy TrEMBL
Match: A0A6J1IJF1 (putative homeobox-leucine zipper protein ATHB-51 OS=Cucurbita maxima OX=3661 GN=LOC111477634 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.8e-64 Identity = 152/237 (64.14%), Postives = 169/237 (71.31%), Query Frame = 0
BLAST of CcUC04G068030 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 ) HSP 1 Score: 148.7 bits (374), Expect = 5.9e-36 Identity = 102/227 (44.93%), Postives = 136/227 (59.91%), Query Frame = 0
BLAST of CcUC04G068030 vs. TAIR 10
Match: AT2G36610.1 (homeobox protein 22 ) HSP 1 Score: 139.4 bits (350), Expect = 3.6e-33 Identity = 80/172 (46.51%), Postives = 119/172 (69.19%), Query Frame = 0
BLAST of CcUC04G068030 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 ) HSP 1 Score: 110.5 bits (275), Expect = 1.8e-24 Identity = 67/152 (44.08%), Postives = 102/152 (67.11%), Query Frame = 0
BLAST of CcUC04G068030 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family ) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-23 Identity = 81/229 (35.37%), Postives = 121/229 (52.84%), Query Frame = 0
BLAST of CcUC04G068030 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 ) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-23 Identity = 54/108 (50.00%), Postives = 80/108 (74.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|