CcUC04G066820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G066820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr04: 23694653 .. 23700420 (-)
RNA-Seq Expression	CcUC04G066820
Synteny	CcUC04G066820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGTTTGAGTTTTTGATTGTTTCATTGGAGTTGAAAATTGTATGGAAGGCGGGAATGAATAGGAAATTTAAGGCTCAAGTGTCGATTCATAAGCATCTTCTTTGTTTGTTTCTAGTTTCAAATGTCACAGGCTTTTGAAAATATGAAATCTGATTCAGTTTTTGAAACTTGATGAATGTCCCAGGCATACTTTATAGATTGCGGGACTATGTACCGTTCTATTTGAATTTATTTTGTATGTAGGGAAAACACGAGCATAATTCTTCATCTTATTTGATCAACAAGATCTGTTAGCTTCGTTTTCTTTTGGGCAGAGATAATTTGTTAAGTACAGTATTATCTCCATCTTTGAGCAACTACAACATATTGTACATAATAAAGAAACAGAAATTTTCTATGTATTCCCGGCATGTGTTGTATACGTATATATATATAGTATGTAGGTAAGCATGTGTAACTCAAAAGTTGAAAATGAAAGAATGGTCATGAAGGTGATAAAACTTCCTAGTGAATATTTATTTTCTGATGTTTGATTTTACCTGTTACCTCTGGTTTTTGTTTATTATTGCTTATGTATTATACAATTTCTTTTACTTCTCTCTTGGGTAGGAACTCAGGCTGATCTATTGAGGTGGAATGTTATTTTTGGATTGTAAATTTATAAGTACTAATCCATGAGAACTAAAAGTGGGATTCACCTATTTATTATTGAGTATAATACAATCAGCAGATGGTTTTAAATAAACAAACTAGCAAAACATTTCTCATGAGTTATGGTTTTTCATTTTTTGTTTTTTCTTCCCTCTGCTCCATTTATGTTGATTTGGTGTTCTGACATTCTTGTCCAATCAACAATGTACCAATTATGGTTTGTATACCCTTTTTAGTAACCTAAACTGTTTTGACTTTATGATAGGACTGCGTGTTTGCTGCAAAGCTCAAGGTCAAGGCTGTTTAGATGGAGATACCCAGTAAAGAACATGATTCTCGACCTTCATTTTCCAATGTTTATGAACTACGAGGAGAGCCTGCTATAGTAATTAATGGGGTGCCTGATATACCTACTTGTGACAATGCCCTTGCCCTTTGTAATTCTCTGAATGATGAAAATTTACTTGGAAGTACTGGCTTTGGTGAGTGGTTAGAAGGGAGAGTTGTTAACAAAATGTTTGGCGATCGGTATTACTATGGCGTCATAATCGAGTACGACAAAGTTACAGGATGGTATAGAGTGGAGTATGAAGATGGAGATTTCGAAGATCTCGATTGGCATGCACTCGAACAAGTGCTTTTGCCGATGGACATTACAGTTCCATTAAAAGCCTTAGCATTGAAGACTCTGAAGAGAAGCAGGAAGGCGCGGAAGAACAGGAAAAACAAGACGGGAAACAGGCGAGGTGAAACCAAAGAAATGGAAGGCAGGAGGAAGAAGAGTGTGGGAAGTAAAGTTGTATTACCGACAGAACCTGCAGCCTGAGTTCTATTATTTCTTTTTGGGACATAAGCTTATGGCTAAGCAAAATTAGGTGCTACCATTGATTGGCAGCAGGGCTTAGGAACAAATTTAGGTGATGTTTACTTTTTAGGAAACATAATTTATCCATGGTAATTTGAAATGTGAGCCTCATCTGATTACGTTTATTGTTGTTTACCAATGTTTTGTAATTGTAACGAAATGTGAGTCCCTCTACAAAATTCGTAATCAACAAACGTAATCTAATTGCGGAGGAGTGGGTCATCGATCAAACATGTTTAATTATTAGTGTACCTACACCGTCTTTATTATTATGTTTCCATCCTTTACTCTTTTCTATTTAGTTACTATGCTTTAATTAATTAGAAATATAAAAAAGGACATTATAATAATCATCTCTAAGTTTTCCTATGAAGTAAACAACATTGATGAATATTTTTTATTACGATTGCATCAGTTCATAGTAAACACAATCAGAGTTATATTTCTTTTGTGATAGAGACCGATTACAATTGATACATGAATGCAAACTTATTATGATGATGTCGATTTTAATTATGGATTAGTAAACATGACCCATGCTATATATATATATATATTTGAATTCATGGCCTGTGCTATATTGCTTGATTAAAGGGTGGATCAGAGTGTTTTGGCACTCTTTTTTTTTGTTCATGCTTTGCTTTAAGCACGTCTCAGCAGGTAGTTCTAATGAGAAATCTTGTTCGAATGGTTTCTTAAGATTTGATAATTAGATTTAGAGATGGACAAAAGATCTAATACTTTCTCGCACAATTGATCTCATAAATTCATCCAATTTATTTCCAATTCGCTACTACAATTTTGATACTCAATCGTATTTCCCAAAGAGAGATGCAACAGTTTTCTATTTTACTATTCATTATGATGGCTTTATACATATAAAGTATTACATCACAAAGGTAGGGGAGACTTCAATTTTAATCCATTGTTGTGTAATTGATCGACAAAATTACAAAAATGTTTCTGAACTTTGCCCATTACTTAAAAATTATCGACATTCTTACCAAAGTTGTAGTATTGCACTTGATTTTCAATATTATTTTTAGAGTAAAAATTTGTTAACATAAAAATTGAAGCCTGAAAGGTGCGGTGGGGACTCGGAATGCAAGTTGAGGCAATACGATGCCGCGTTGTTCAAATCAGCACCACTTAATGTTCATCTAAATTTTTAATCAATCTCTCCTTTAAGATAGTTTTGAAACATCTATGAAAAGTTACAAATAATATTTTAATTTAACTTCTTGATTTTGAAAAAATGGACATATTTTTTAAAACAAATGACAAAGCTCAAAGTAATTTTATTTTGTATGTTAGCCTTGTTTTTGTTAATGACTTAAATTAGTTTTTTTTTTTTTTTGGGTAAAAATGACCAAATCTATGTTGCATTTATGTCGAATGACTTGAATTTTGAAAACAATGAATATTGACCTTTTTTTCTGATGTCACATATCACTTGCTCTTGCTACTTTCTTTATACCTCTTGCTCACATTCATTTCCCCCTTGCCCTCACACTACTTTATTCCCTCTTTTATCTCCCTTGCGCTTCTTCCTTCTTCTCTCCCTTGGGATTGTGACCACTATCCAACTGTTTATTACATGTTTCAGTGAACACTCACGCTCATGCTTTAGACCATAGACTGACTATTCATCACCCACTCCAATGAACCCTCACACCTAGGGATGTGCAACGGTCTGTCGAAGTCGGTTTTTTGACCAAACTTCCACCGAACCAACCATGGTCGGTTTAATAAATGTTCAAACCAATCTTGATCGTCTAGGAATGAAAACGACCTTCGACCGGTCAATCGGTTATCTTCTTTGAATTTTTTAAAAAAACAATGTCTATTTGAATTTTCCCAAACCAGGTCCCTTCGGATCAGTCTGTTCGGTTTTTCGGTTTATCATGCTCAACCCTACTCACGTCCATGCTTCTAGGCATCTTCCGACTGTTTATCACAAATAGGAGGATTGAGGAAGGAACACGAGGACTTGCTCTAGTTCCCGTGTTTGAAGAGGAGAAAAAGAAACAAGAGTGCTCAGATCTAAGGGAGGAGCGCAGGCGAGAGGGACAAAAAAAAGTAACTAACGAGATCTTTAAGGTATGCAATTTAAGCAAAAAATCATTATTCATTGTTTTCAAAATTTGGTACCTTTCACATATATTTTTTTTTTAAATAAAAAACCTCAAACAGGAATTTACTCCAAATTCATTCTAATTTTAGTTTAGATTCTGAAATACCAAATTTACCCCTCATATTTAAGGATAGAATTCAAACCTAACTCATTTCTTCCTTCTCTCTCGGCTGCTGGCTCCTCTTTTCTCTCAACTGCGATCACTCTCTTAAATTTCGTTTGGCACACAAGACAACATTGTCGCCTTGACTCTGCATCCTATTTAACTGAGTCATTCCCTTAAAAGCTAGTTCTGCCCAATCTGCCATTCAAATTTCAAGCAATTTTAACAAATTTCTCTTCGCTATCAAAAGGCTTTGGAGTAATTGGCTCTGTCTGTATGATCCATCAGGAACTACACACTTGTTGTCTACCATCAAATGATTATCTTGTTGAAATCCAATACTGTCACTATCAAGCAATTTTGCCGCTTTTGTTGAATGCAGCTGCTCGACAATTGCAACTAGCCTCATGGGCTGTTATCTGTAATGACAGTTCGTCCTCTTCATTTGCTCTTTGCGATATCTCAATCTTCTGCACTTCTTTATAGACATGGCTTCCACATAGTGGCCTCCATTAGGCTTTTCTCTAACTTCAAACCTAAGTTCCATTCGACCACGAACTTACCTAAACCTCCCAGACTCTTGGAGCTCATTTCTCCAAAGGGAAATGTCGCCTCTGAAAGTTGCCAAACTCATCTTCGGCTCATTCAGGACTTTTTACGAACAGATTCGGATCAATGTCGATCTCAAACCCTTACAGACGGTTTTGATTCTCATTCAGTTGTTTTAACCAAGGATTCATCCTTTGTTCTTGATCAAGAACGTGAGTCTGGTCACTGGGATCTTCAGTTGTTCGCAGGAAGATTTAAATTTGATGCGAACGATATATCCAGCGGTTTGAGTTTGTGCAGTTCTCGGCGCAACCTTCGTGGTGGAATTCAGTATCATTCTGTGGCGATACGAACTGGGTTTATTGCCAATGTGTATGTAGGAAGTACGTTGGTAAGTTTGTACGGGAAATGCGGGGAGTTGTGTAATGCATATCAGGTGTTTGAAGAAATGCCTGTGAGAAATGTTGTGTCATGGACAGCCATTATTGCTGGGTTTGCTGTAGAATGGCAAGTTGGTATGTGCTTGGAGCTTTTCCAACAGATGAAAAGAATGGCATTGCAACCAAATGAGTTTACTTTTACTACTATATTGAATGCTTGCACTGGCAGTGGAGCCCTTGGAGTAGGAAGAAGCCTCCATTGTCAAACATTCAAAATGGGCCTTGATTCTTGTCTCCATATTGCAAATGTTTTGATCTCAATGTACTGTAAATGTGGAGCTATTAACTTAGCATTATACATATTTGAAGCCATGGAAGTCAAAGACGTTGTTTCATGGAATTCCATGATCGCAGGTTATGCTCAACACGGACTTTCTCTACAAGCCATCAATCTTTTTAAAGCAATGAGGAAGCAGAAGCAAGTGGAAGCCGATGCCATCACTTTCCTTGGTGTTCTGTCCTCATGTAGACATGCAGGGCTTGTGGAAGAGGGCAGATACTACTTCAATCTTATGGTCGAGCTTGGTTTGAAACCAGAGTTGGATCATTATTCATGTGTTATCGATTTGCTTGGCCGAGCTGGACTACTCAAAGAGGCTCAAAACTTCATTAAGAAGATGCCCATATCTCCCAATTCAATTGTTTGGGGATCACTTCTCTCTGCTTGCAGGCTTCATGGGAATGTTTGGATAGGATTGAAGGCTGCAGAGCGTAGATTGTTGCTGCAACCCAATTGCGCATCGACACACTTGCAATTGGCTAATCTGTATGCAAAGGCAGGATACCTGGATGATGTTGCAAGGTTGAGGAAGATGATGAAAGACAAAGGACTGAAGACTGCTCCTGGATATAGCTGGATTGAGATTCAGAATAAAGTTTACAGATTCAAAGCAGAAGATAAGTCAAACCCTGTAATGGTTGAGATTTTTGGTCTTATGGATAGCATAGTGAATCACATGAGATCTGTAGGCTGTGTTCATGAAGTGGACGAAGTTGATGATGTTTTACTACCAACATCCTGA

mRNA sequence

ATGCTGGTAAGCATGTGTAACTCAAAAGTTGAAAATGAAAGAATGGTCATGAAGATGGAGATACCCAGTAAAGAACATGATTCTCGACCTTCATTTTCCAATGTTTATGAACTACGAGGAGAGCCTGCTATAGTAATTAATGGGGTGCCTGATATACCTACTTGTGACAATGCCCTTGCCCTTTGTAATTCTCTGAATGATGAAAATTTACTTGGAAGTACTGGCTTTGGTGAGTGGTTAGAAGGGAGAGTTGTTAACAAAATGTTTGGCGATCGGTATTACTATGGCGTCATAATCGAGTACGACAAAGTTACAGGATGGTATAGAGTGGAGTATGAAGATGGAGATTTCGAAGATCTCGATTGGCATGCACTCGAACAAGTGCTTTTGCCGATGGACATTACAGTTCCATTAAAAGCCTTAGCATTGAAGACTCTGAAGAGAAGCAGGAAGGCGCGGAAGAACAGGAAAAACAAGACGGGAAACAGGCGAGGTGAAACCAAAGAAATGGAAGGCAGGAGGAAGAAGAGTGTGGGAATTCGTCCTCTTCATTTGCTCTTTGCGATATCTCAATCTTCTGCACTTCTTTATAGACATGGCTTCCACATAGTGGCCTCCATTAGGCTTTTCTCTAACTTCAAACCTAAGTTCCATTCGACCACGAACTTACCTAAACCTCCCAGACTCTTGGAGCTCATTTCTCCAAAGGGAAATGTCGCCTCTGAAAGTTGCCAAACTCATCTTCGGCTCATTCAGGACTTTTTACGAACAGATTCGGATCAATGTCGATCTCAAACCCTTACAGACGGTTTTGATTCTCATTCAGTTGTTTTAACCAAGGATTCATCCTTTGTTCTTGATCAAGAACGTGAGTCTGGTCACTGGGATCTTCAGTTGTTCGCAGGAAGATTTAAATTTGATGCGAACGATATATCCAGCGGTTTGAGTTTGTGCAGTTCTCGGCGCAACCTTCGTGGTGGAATTCAGTATCATTCTGTGGCGATACGAACTGGGTTTATTGCCAATGTGTATGTAGGAAGTACGTTGGTAAGTTTGTACGGGAAATGCGGGGAGTTGTGTAATGCATATCAGGTGTTTGAAGAAATGCCTGTGAGAAATGTTGTGTCATGGACAGCCATTATTGCTGGGTTTGCTGTAGAATGGCAAGTTGGTATGTGCTTGGAGCTTTTCCAACAGATGAAAAGAATGGCATTGCAACCAAATGAGTTTACTTTTACTACTATATTGAATGCTTGCACTGGCAGTGGAGCCCTTGGAGTAGGAAGAAGCCTCCATTGTCAAACATTCAAAATGGGCCTTGATTCTTGTCTCCATATTGCAAATGTTTTGATCTCAATGTACTGTAAATGTGGAGCTATTAACTTAGCATTATACATATTTGAAGCCATGGAAGTCAAAGACGTTGTTTCATGGAATTCCATGATCGCAGGTTATGCTCAACACGGACTTTCTCTACAAGCCATCAATCTTTTTAAAGCAATGAGGAAGCAGAAGCAAGTGGAAGCCGATGCCATCACTTTCCTTGGTGTTCTGTCCTCATGTAGACATGCAGGGCTTGTGGAAGAGGGCAGATACTACTTCAATCTTATGGTCGAGCTTGGTTTGAAACCAGAGTTGGATCATTATTCATGTGTTATCGATTTGCTTGGCCGAGCTGGACTACTCAAAGAGGCTCAAAACTTCATTAAGAAGATGCCCATATCTCCCAATTCAATTGTTTGGGGATCACTTCTCTCTGCTTGCAGGCTTCATGGGAATGTTTGGATAGGATTGAAGGCTGCAGAGCGTAGATTGTTGCTGCAACCCAATTGCGCATCGACACACTTGCAATTGGCTAATCTGTATGCAAAGGCAGGATACCTGGATGATGTTGCAAGGTTGAGGAAGATGATGAAAGACAAAGGACTGAAGACTGCTCCTGGATATAGCTGGATTGAGATTCAGAATAAAGTTTACAGATTCAAAGCAGAAGATAAGTCAAACCCTGTAATGGTTGAGATTTTTGGTCTTATGGATAGCATAGTGAATCACATGAGATCTGTAGGCTGTGTTCATGAAGTGGACGAAGTTGATGATGTTTTACTACCAACATCCTGA

Coding sequence (CDS)

ATGCTGGTAAGCATGTGTAACTCAAAAGTTGAAAATGAAAGAATGGTCATGAAGATGGAGATACCCAGTAAAGAACATGATTCTCGACCTTCATTTTCCAATGTTTATGAACTACGAGGAGAGCCTGCTATAGTAATTAATGGGGTGCCTGATATACCTACTTGTGACAATGCCCTTGCCCTTTGTAATTCTCTGAATGATGAAAATTTACTTGGAAGTACTGGCTTTGGTGAGTGGTTAGAAGGGAGAGTTGTTAACAAAATGTTTGGCGATCGGTATTACTATGGCGTCATAATCGAGTACGACAAAGTTACAGGATGGTATAGAGTGGAGTATGAAGATGGAGATTTCGAAGATCTCGATTGGCATGCACTCGAACAAGTGCTTTTGCCGATGGACATTACAGTTCCATTAAAAGCCTTAGCATTGAAGACTCTGAAGAGAAGCAGGAAGGCGCGGAAGAACAGGAAAAACAAGACGGGAAACAGGCGAGGTGAAACCAAAGAAATGGAAGGCAGGAGGAAGAAGAGTGTGGGAATTCGTCCTCTTCATTTGCTCTTTGCGATATCTCAATCTTCTGCACTTCTTTATAGACATGGCTTCCACATAGTGGCCTCCATTAGGCTTTTCTCTAACTTCAAACCTAAGTTCCATTCGACCACGAACTTACCTAAACCTCCCAGACTCTTGGAGCTCATTTCTCCAAAGGGAAATGTCGCCTCTGAAAGTTGCCAAACTCATCTTCGGCTCATTCAGGACTTTTTACGAACAGATTCGGATCAATGTCGATCTCAAACCCTTACAGACGGTTTTGATTCTCATTCAGTTGTTTTAACCAAGGATTCATCCTTTGTTCTTGATCAAGAACGTGAGTCTGGTCACTGGGATCTTCAGTTGTTCGCAGGAAGATTTAAATTTGATGCGAACGATATATCCAGCGGTTTGAGTTTGTGCAGTTCTCGGCGCAACCTTCGTGGTGGAATTCAGTATCATTCTGTGGCGATACGAACTGGGTTTATTGCCAATGTGTATGTAGGAAGTACGTTGGTAAGTTTGTACGGGAAATGCGGGGAGTTGTGTAATGCATATCAGGTGTTTGAAGAAATGCCTGTGAGAAATGTTGTGTCATGGACAGCCATTATTGCTGGGTTTGCTGTAGAATGGCAAGTTGGTATGTGCTTGGAGCTTTTCCAACAGATGAAAAGAATGGCATTGCAACCAAATGAGTTTACTTTTACTACTATATTGAATGCTTGCACTGGCAGTGGAGCCCTTGGAGTAGGAAGAAGCCTCCATTGTCAAACATTCAAAATGGGCCTTGATTCTTGTCTCCATATTGCAAATGTTTTGATCTCAATGTACTGTAAATGTGGAGCTATTAACTTAGCATTATACATATTTGAAGCCATGGAAGTCAAAGACGTTGTTTCATGGAATTCCATGATCGCAGGTTATGCTCAACACGGACTTTCTCTACAAGCCATCAATCTTTTTAAAGCAATGAGGAAGCAGAAGCAAGTGGAAGCCGATGCCATCACTTTCCTTGGTGTTCTGTCCTCATGTAGACATGCAGGGCTTGTGGAAGAGGGCAGATACTACTTCAATCTTATGGTCGAGCTTGGTTTGAAACCAGAGTTGGATCATTATTCATGTGTTATCGATTTGCTTGGCCGAGCTGGACTACTCAAAGAGGCTCAAAACTTCATTAAGAAGATGCCCATATCTCCCAATTCAATTGTTTGGGGATCACTTCTCTCTGCTTGCAGGCTTCATGGGAATGTTTGGATAGGATTGAAGGCTGCAGAGCGTAGATTGTTGCTGCAACCCAATTGCGCATCGACACACTTGCAATTGGCTAATCTGTATGCAAAGGCAGGATACCTGGATGATGTTGCAAGGTTGAGGAAGATGATGAAAGACAAAGGACTGAAGACTGCTCCTGGATATAGCTGGATTGAGATTCAGAATAAAGTTTACAGATTCAAAGCAGAAGATAAGTCAAACCCTGTAATGGTTGAGATTTTTGGTCTTATGGATAGCATAGTGAATCACATGAGATCTGTAGGCTGTGTTCATGAAGTGGACGAAGTTGATGATGTTTTACTACCAACATCCTGA

Protein sequence

MLVSMCNSKVENERMVMKMEIPSKEHDSRPSFSNVYELRGEPAIVINGVPDIPTCDNALALCNSLNDENLLGSTGFGEWLEGRVVNKMFGDRYYYGVIIEYDKVTGWYRVEYEDGDFEDLDWHALEQVLLPMDITVPLKALALKTLKRSRKARKNRKNKTGNRRGETKEMEGRRKKSVGIRPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNVASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQLFAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACTGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVELGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEVDEVDDVLLPTS

Homology

[Close]

BLAST of CcUC04G066820 vs. NCBI nr
Match: XP_038881286.1 (pentatricopeptide repeat-containing protein At2g37320 isoform X1 [Benincasa hispida])

HSP 1 Score: 931.8 bits (2407), Expect = 3.5e-267
Identity = 458/526 (87.07%), Postives = 492/526 (93.54%), Query Frame = 0


Query: 181 RPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNVA 240
           R L ++F ISQSSALLYRHGFH+V SIRLFSNFKPK  S+TNLPKPP+LL+LISPKGN A
Sbjct: 14  RLLRMVFEISQSSALLYRHGFHLVPSIRLFSNFKPKTQSSTNLPKPPKLLDLISPKGNFA 73

Query: 241 SESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQLF 300
           +E+ QTHLRLIQDFL+TDSDQCRSQTL+DGFDSHS+V +KDSS VL QERESGHWDLQLF
Sbjct: 74  NENRQTHLRLIQDFLQTDSDQCRSQTLSDGFDSHSIVPSKDSSSVLYQERESGHWDLQLF 133

Query: 301 AGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELC 360
           AGRFKFDANDISS LSLCSS+ NLRGGIQYHSVAIRTGFIANVYVGS+LVSLYGKCGEL 
Sbjct: 134 AGRFKFDANDISSVLSLCSSQLNLRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCGELS 193

Query: 361 NAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACT 420
           NAYQVFEEMPVRNVVSWTAII+GFAVEW V MCL+LFQQMKRMALQPNEFTF TIL+ACT
Sbjct: 194 NAYQVFEEMPVRNVVSWTAIISGFAVEWHVDMCLKLFQQMKRMALQPNEFTFATILSACT 253

Query: 421 GSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNS 480
           GSGALG+GRSLHCQTFKMG DS LH+AN LISMYCKCGA+N ALYIFEAMEVKD+VSWNS
Sbjct: 254 GSGALGLGRSLHCQTFKMGFDSYLHVANALISMYCKCGALNFALYIFEAMEVKDIVSWNS 313

Query: 481 MIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVEL 540
           MIAGYAQHGLSLQAI+L+  MRKQKQVEADAITFLGVLSSCRHAGLVEEG+YYFNLMVEL
Sbjct: 314 MIAGYAQHGLSLQAIDLYITMRKQKQVEADAITFLGVLSSCRHAGLVEEGKYYFNLMVEL 373

Query: 541 GLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKA 600
           G+KPELDHY+CVIDLLGRAGLLKEAQNFI++MPISPNSIVWGSLLSACRLHGNVWIGLKA
Sbjct: 374 GVKPELDHYACVIDLLGRAGLLKEAQNFIEEMPISPNSIVWGSLLSACRLHGNVWIGLKA 433

Query: 601 AERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYR 660
           AE RLLLQP+CASTHLQ+ANLYAKAGYL+D ARLRKMMKDKGLKT PGYSWIEIQNKVYR
Sbjct: 434 AESRLLLQPDCASTHLQMANLYAKAGYLNDAARLRKMMKDKGLKTTPGYSWIEIQNKVYR 493

Query: 661 FKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEV-DEVDDVLLPTS 706
           FKAEDKSNPVMVEI GLMD I+NHMR +G  HEV DEVDD+ L TS
Sbjct: 494 FKAEDKSNPVMVEILGLMDGIMNHMRFIGYFHEVEDEVDDIFLATS 539

[Close]

BLAST of CcUC04G066820 vs. NCBI nr
Match: KAG6603691.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 917.1 bits (2369), Expect = 8.9e-263
Identity = 455/527 (86.34%), Postives = 485/527 (92.03%), Query Frame = 0


Query: 180 IRPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNV 239
           +R LH+LF IS SSALL RHGFHIV SIRLFS FK     TTNLPKPPRLL+LISPKGN 
Sbjct: 3   VRLLHMLFVISASSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKGNA 62

Query: 240 ASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQL 299
           ASES QTHLRLI+DFLRTDSDQCRSQTL+DGFDS SV L+KDSS V DQERESGHW  QL
Sbjct: 63  ASESRQTHLRLIKDFLRTDSDQCRSQTLSDGFDSDSVFLSKDSSSVRDQERESGHWGFQL 122

Query: 300 FAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGEL 359
           FAGRF+FDANDISS LSLC S+RNLRGGIQYHSVAIRTGFIANVYVGS+LVSLYGKC E+
Sbjct: 123 FAGRFEFDANDISSALSLCCSQRNLRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCWEM 182

Query: 360 CNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNAC 419
            +A QVF+EMPVRNVVSWTAIIAGFA EWQV MCLELFQ+M+RMALQPNEFTF TIL+AC
Sbjct: 183 NDACQVFDEMPVRNVVSWTAIIAGFAQEWQVDMCLELFQRMRRMALQPNEFTFATILSAC 242

Query: 420 TGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWN 479
           TGSGALGVGRSLHCQTFKMG DS +HIAN LISMYCKCGA+N A+Y+FEAMEVKD VSWN
Sbjct: 243 TGSGALGVGRSLHCQTFKMGFDSHVHIANALISMYCKCGALNFAVYLFEAMEVKDTVSWN 302

Query: 480 SMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVE 539
           SMIAGYAQHGLSLQAI+LFKAMRKQ+QVEAD ITFLGVLSSCRH GLVEEGRYYFNLMVE
Sbjct: 303 SMIAGYAQHGLSLQAIDLFKAMRKQQQVEADGITFLGVLSSCRHGGLVEEGRYYFNLMVE 362

Query: 540 LGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLK 599
           LGLKPELDHYSCVIDLLGRAGLLKEAQNFI+ MPISPNSIVWGSLLSACRLHGNVWIGLK
Sbjct: 363 LGLKPELDHYSCVIDLLGRAGLLKEAQNFIENMPISPNSIVWGSLLSACRLHGNVWIGLK 422

Query: 600 AAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVY 659
           AAE RLLLQP+CASTHLQLANLYA+AGYLD+ ARLRKMMKDKGLKTAPGYSWIEIQNKVY
Sbjct: 423 AAESRLLLQPDCASTHLQLANLYARAGYLDNAARLRKMMKDKGLKTAPGYSWIEIQNKVY 482

Query: 660 RFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEV-DEVDDVLLPTS 706
           RFKAEDKSNPVM+EIFG+MD +VNHMRSVGCV EV DE++D LL TS
Sbjct: 483 RFKAEDKSNPVMIEIFGVMDGMVNHMRSVGCVPEVDDELEDALLATS 529

[Close]

BLAST of CcUC04G066820 vs. NCBI nr
Match: XP_022977771.1 (pentatricopeptide repeat-containing protein At2g37320 [Cucurbita maxima])

HSP 1 Score: 915.2 bits (2364), Expect = 3.4e-262
Identity = 453/527 (85.96%), Postives = 486/527 (92.22%), Query Frame = 0


Query: 180 IRPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNV 239
           +R LH+LF ISQSSALL RHGFHIV SIRLFS FK     TTNLPKPPRLL+LISPKGN 
Sbjct: 3   VRLLHMLFVISQSSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKGNA 62

Query: 240 ASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQL 299
           ASES QTHLRLI+DFL+TDSDQCRSQTL+DGFDS SV L+KDSS VLDQERESGHWD QL
Sbjct: 63  ASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWDFQL 122

Query: 300 FAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGEL 359
           FAGRF+FDANDISS LSLC S+RNLRGGIQYHSVAIRTGFIANVYVGS+LVSLYGKC E+
Sbjct: 123 FAGRFEFDANDISSALSLCCSQRNLRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCCEM 182

Query: 360 CNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNAC 419
            +A QVF+EMPVRNVVSWTAIIAGFA EWQV MCLELFQ+M+RMALQPNEFTF TIL+AC
Sbjct: 183 TDACQVFDEMPVRNVVSWTAIIAGFAQEWQVDMCLELFQRMRRMALQPNEFTFATILSAC 242

Query: 420 TGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWN 479
           TGSGALGVGRSLHCQTFKMG DS +HIAN LISMYCKCGA+N A+Y+FEAMEVKD VSWN
Sbjct: 243 TGSGALGVGRSLHCQTFKMGFDSHVHIANALISMYCKCGALNFAVYLFEAMEVKDTVSWN 302

Query: 480 SMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVE 539
           SMIAGYAQHGLSL+AI+LF+AMRKQ+QVEAD ITFLGVLSSCRH GLVEEGRYYFNLMVE
Sbjct: 303 SMIAGYAQHGLSLKAIDLFEAMRKQQQVEADGITFLGVLSSCRHGGLVEEGRYYFNLMVE 362

Query: 540 LGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLK 599
           L LKPELDHYSCVIDLLGRAGLLKEAQNFI+KMPISPNSIVWGSLLSACRLHGNVWIGLK
Sbjct: 363 LALKPELDHYSCVIDLLGRAGLLKEAQNFIEKMPISPNSIVWGSLLSACRLHGNVWIGLK 422

Query: 600 AAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVY 659
           AAE RLLLQP+CASTHLQLANLYA+AGYL+D ARLRKMMKDKGLKTAPGYSWIEIQNKVY
Sbjct: 423 AAESRLLLQPDCASTHLQLANLYARAGYLEDAARLRKMMKDKGLKTAPGYSWIEIQNKVY 482

Query: 660 RFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEV-DEVDDVLLPTS 706
           RFKAEDKSNPVM+EIFG+MD +VNHMRSV CV EV DE++D LL  S
Sbjct: 483 RFKAEDKSNPVMIEIFGVMDGMVNHMRSVDCVPEVDDELEDALLAKS 529

[Close]

BLAST of CcUC04G066820 vs. NCBI nr
Match: XP_022949850.1 (pentatricopeptide repeat-containing protein At2g37320 [Cucurbita moschata])

HSP 1 Score: 912.9 bits (2358), Expect = 1.7e-261
Identity = 453/527 (85.96%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 180 IRPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNV 239
           +R LH+LF IS SSALL RHGFHIV SIRLFS FK     TTNLPKPPRLL+LISPKGN 
Sbjct: 3   VRLLHMLFVISASSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKGNA 62

Query: 240 ASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQL 299
           ASES QTHLRLI+DFLRTDSDQCRSQTL+DGFDS SV L+KDSS V DQERESGHW  QL
Sbjct: 63  ASESRQTHLRLIKDFLRTDSDQCRSQTLSDGFDSDSVFLSKDSSSVRDQERESGHWGFQL 122

Query: 300 FAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGEL 359
           FAGRF+FDANDISS LSLC S+RN RGGIQYHSVAIRTGFIANVYVGS+LVSLYGKC E+
Sbjct: 123 FAGRFEFDANDISSALSLCCSQRNRRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCWEM 182

Query: 360 CNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNAC 419
            +A QVF+EMPVRNVVSWTAIIAGFA EWQV MCLELFQ+M+RMALQPNEFTF TIL+AC
Sbjct: 183 NDACQVFDEMPVRNVVSWTAIIAGFAQEWQVDMCLELFQRMRRMALQPNEFTFATILSAC 242

Query: 420 TGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWN 479
           TGSGALGVGRSLHCQTFKMG DS +HIAN LISMYCKCGA+N A+Y+FEAMEVKD VSWN
Sbjct: 243 TGSGALGVGRSLHCQTFKMGFDSHVHIANALISMYCKCGALNFAVYLFEAMEVKDTVSWN 302

Query: 480 SMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVE 539
           S+IAGYAQHGLSLQAI+LFKAMRKQ+QVEAD ITFLGVLSSCRH GLVEEGRYYFNLMVE
Sbjct: 303 SIIAGYAQHGLSLQAIDLFKAMRKQQQVEADGITFLGVLSSCRHGGLVEEGRYYFNLMVE 362

Query: 540 LGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLK 599
           LGLKPELDHYSCVIDLLGRAGLLKEAQN I+ MPISPNSIVWGSLLSACRLHGNVWIGLK
Sbjct: 363 LGLKPELDHYSCVIDLLGRAGLLKEAQNLIENMPISPNSIVWGSLLSACRLHGNVWIGLK 422

Query: 600 AAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVY 659
           AAE RLLLQP+CASTHLQLANLYA+AGYLDD ARLRKMMKDKGLKTAPGYSWIEIQNKVY
Sbjct: 423 AAESRLLLQPDCASTHLQLANLYARAGYLDDAARLRKMMKDKGLKTAPGYSWIEIQNKVY 482

Query: 660 RFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEVD-EVDDVLLPTS 706
           RFKAEDKSNPVM+EIFG+MD +VNHMRSVGCV EVD E++D LL TS
Sbjct: 483 RFKAEDKSNPVMIEIFGVMDGMVNHMRSVGCVPEVDNELEDALLATS 529

[Close]

BLAST of CcUC04G066820 vs. NCBI nr
Match: XP_023544680.1 (pentatricopeptide repeat-containing protein At2g37320 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 912.5 bits (2357), Expect = 2.2e-261
Identity = 452/527 (85.77%), Postives = 486/527 (92.22%), Query Frame = 0


Query: 180 IRPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNV 239
           +R LH LF IS+SSALL RHGFHIV SIRLFS FK     TT+LPKPPRLL+LISPKGN 
Sbjct: 3   VRLLHTLFVISESSALLCRHGFHIVTSIRLFSYFKRNTLPTTSLPKPPRLLDLISPKGNA 62

Query: 240 ASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQL 299
           ASES QTHLRLI+DFL+TDSDQCRSQTL+DGFDS SV L+KDSS VLDQERESGHW  QL
Sbjct: 63  ASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWGFQL 122

Query: 300 FAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGEL 359
           FAGRF+FDANDISS LSLC S+RNLRGGIQYHSVAIRTGFIANVYVGS+LVSLYGKC E+
Sbjct: 123 FAGRFEFDANDISSALSLCCSQRNLRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCWEM 182

Query: 360 CNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNAC 419
            +A QVF+EMPVRNVVSWTA+IAGFA EWQV MCLELFQQMKRMAL+PNEFTF TIL+AC
Sbjct: 183 TDACQVFDEMPVRNVVSWTAMIAGFAQEWQVDMCLELFQQMKRMALRPNEFTFATILSAC 242

Query: 420 TGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWN 479
           TGSGALGVGRSLHCQTFKMG DS +HIAN LISMYCKCGA+N A+Y+FEAMEVKD VSWN
Sbjct: 243 TGSGALGVGRSLHCQTFKMGFDSHVHIANALISMYCKCGALNFAVYLFEAMEVKDTVSWN 302

Query: 480 SMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVE 539
           SMIAGYAQHGLSLQAI+LF+AMRKQ+QVEAD ITFLGVLSSCRH GLVEEGRYYFNLMVE
Sbjct: 303 SMIAGYAQHGLSLQAIDLFEAMRKQQQVEADGITFLGVLSSCRHGGLVEEGRYYFNLMVE 362

Query: 540 LGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLK 599
           L LKPELDHYSCVIDLLGRAGLLKEAQNFI+KMPISPNSIVWGSLLSACRLHGNVWIGLK
Sbjct: 363 LSLKPELDHYSCVIDLLGRAGLLKEAQNFIEKMPISPNSIVWGSLLSACRLHGNVWIGLK 422

Query: 600 AAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVY 659
           AAE RLLLQP+CASTHLQLANLYA+AGYLDD ARLRKMMKDKGLKT+PGYSWIEIQNKVY
Sbjct: 423 AAESRLLLQPDCASTHLQLANLYARAGYLDDAARLRKMMKDKGLKTSPGYSWIEIQNKVY 482

Query: 660 RFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEV-DEVDDVLLPTS 706
           RFKAEDKSNPVM+EIFG+MD +VNHMRSVGCV EV DE+++ LL TS
Sbjct: 483 RFKAEDKSNPVMIEIFGVMDGMVNHMRSVGCVPEVDDELENALLATS 529

[Close]

BLAST of CcUC04G066820 vs. ExPASy Swiss-Prot
Match: Q9ZUT4 (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E50 PE=2 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 1.8e-144
Identity = 253/458 (55.24%), Postives = 335/458 (73.14%), Query Frame = 0


Query: 228 RLLELISPKGNVASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLD 287
           R+L++IS K    S   Q H   +Q+F +TDS + R Q +++ FD   +  TK+    + 
Sbjct: 44  RVLDIISSKSGGVSNR-QDHFGFVQEFRQTDSWRFRGQAISEDFD---LSRTKNGVSSVL 103

Query: 288 QERESGHWDLQLFAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGS 347
           +E         +    + FDA  +SS +  C   R+ R G  +H +A++ GFI++VY+GS
Sbjct: 104 EEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGS 163

Query: 348 TLVSLYGKCGELCNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQP 407
           +LV LY   GE+ NAY+VFEEMP RNVVSWTA+I+GFA EW+V +CL+L+ +M++    P
Sbjct: 164 SLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDP 223

Query: 408 NEFTFTTILNACTGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIF 467
           N++TFT +L+ACTGSGALG GRS+HCQT  MGL S LHI+N LISMYCKCG +  A  IF
Sbjct: 224 NDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF 283

Query: 468 EAMEVKDVVSWNSMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLV 527
           +    KDVVSWNSMIAGYAQHGL++QAI LF+ M  +   + DAIT+LGVLSSCRHAGLV
Sbjct: 284 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 343

Query: 528 EEGRYYFNLMVELGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSA 587
           +EGR +FNLM E GLKPEL+HYSC++DLLGR GLL+EA   I+ MP+ PNS++WGSLL +
Sbjct: 344 KEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFS 403

Query: 588 CRLHGNVWIGLKAAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAP 647
           CR+HG+VW G++AAE RL+L+P+CA+TH+QLANLYA  GY  + A +RK+MKDKGLKT P
Sbjct: 404 CRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNP 463

Query: 648 GYSWIEIQNKVYRFKAEDKSNPVMVEIFGLMDSIVNHM 686
           G SWIEI N V+ FKAED SN  M+EI  ++  +++HM
Sbjct: 464 GCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497

[Close]

BLAST of CcUC04G066820 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.0e-80
Identity = 149/363 (41.05%), Postives = 229/363 (63.09%), Query Frame = 0


Query: 342 NVYVGSTLVSLYGKCGELCNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMK 401
           NV   +T+++ Y +CG++  A  +F++MP R+ VSW A+IAG++        L LF QM+
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

Query: 402 RMALQPNEFTFTTILNACTGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAIN 461
           R   + N  +F++ L+ C    AL +G+ LH +  K G ++   + N L+ MYCKCG+I 
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461

Query: 462 LALYIFEAMEVKDVVSWNSMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSC 521
            A  +F+ M  KD+VSWN+MIAGY++HG    A+  F++M K++ ++ D  T + VLS+C
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM-KREGLKPDDATMVAVLSAC 521

Query: 522 RHAGLVEEGRYYFNLMV-ELGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIV 581
            H GLV++GR YF  M  + G+ P   HY+C++DLLGRAGLL++A N +K MP  P++ +
Sbjct: 522 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 581

Query: 582 WGSLLSACRLHGNVWIGLKAAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKD 641
           WG+LL A R+HGN  +   AA++   ++P  +  ++ L+NLYA +G   DV +LR  M+D
Sbjct: 582 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 641

Query: 642 KGLKTAPGYSWIEIQNKVYRFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCV-------HE 697
           KG+K  PGYSWIEIQNK + F   D+ +P   EIF  ++ +   M+  G V       H+
Sbjct: 642 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 701

[Close]

BLAST of CcUC04G066820 vs. ExPASy Swiss-Prot
Match: Q7XJN6 (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E26 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-80
Identity = 152/382 (39.79%), Postives = 242/382 (63.35%), Query Frame = 0


Query: 305 KFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNAYQ 364
           K D++ ++S  + C+    LR G+Q H   I+TG + NV+VGS+L+ LY KCG    A +
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532

Query: 365 VFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACTGSGA 424
           VF  M   N+V+W ++I+ ++      + ++LF  M    + P+  + T++L A + + +
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTAS 592

Query: 425 LGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMIAG 484
           L  G+SLH  T ++G+ S  H+ N LI MY KCG    A  IF+ M+ K +++WN MI G
Sbjct: 593 LLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 652

Query: 485 YAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLM-VELGLK 544
           Y  HG  + A++LF  M+K  +   D +TFL ++S+C H+G VEEG+  F  M  + G++
Sbjct: 653 YGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 712

Query: 545 PELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAER 604
           P ++HY+ ++DLLGRAGLL+EA +FIK MPI  +S +W  LLSA R H NV +G+ +AE+
Sbjct: 713 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 772

Query: 605 RLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFKA 664
            L ++P   ST++QL NLY +AG  ++ A+L  +MK+KGL   PG SWIE+ ++   F +
Sbjct: 773 LLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFS 832

Query: 665 EDKSNPVMVEIFGLMDSIVNHM 686
              S+P+  EIF +++ + ++M
Sbjct: 833 GGSSSPMKAEIFNVLNRLKSNM 853

[Close]

BLAST of CcUC04G066820 vs. ExPASy Swiss-Prot
Match: Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.4e-79
Identity = 138/363 (38.02%), Postives = 242/363 (66.67%), Query Frame = 0


Query: 329 QYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNAYQVFEEMPVRNVVSWTAIIAGFAVEW 388
           + H+  ++T +  +  VG+ L+  Y K G++  A +VF  +  +++V+W+A++AG+A   
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473

Query: 389 QVGMCLELFQQMKRMALQPNEFTFTTILNACTGSGA-LGVGRSLHCQTFKMGLDSCLHIA 448
           +    +++F ++ +  ++PNEFTF++ILN C  + A +G G+  H    K  LDS L ++
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533

Query: 449 NVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMIAGYAQHGLSLQAINLFKAMRKQKQV 508
           + L++MY K G I  A  +F+    KD+VSWNSMI+GYAQHG +++A+++FK M+K+K V
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK-V 593

Query: 509 EADAITFLGVLSSCRHAGLVEEGRYYFNLMV-ELGLKPELDHYSCVIDLLGRAGLLKEAQ 568
           + D +TF+GV ++C HAGLVEEG  YF++MV +  + P  +H SC++DL  RAG L++A 
Sbjct: 594 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 653

Query: 569 NFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAERRLLLQPNCASTHLQLANLYAKAG 628
             I+ MP    S +W ++L+ACR+H    +G  AAE+ + ++P  ++ ++ L+N+YA++G
Sbjct: 654 KVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 713

Query: 629 YLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFKAEDKSNPVMVEIFGLMDSIVNHMR 688
              + A++RK+M ++ +K  PGYSWIE++NK Y F A D+S+P+  +I+  ++ +   ++
Sbjct: 714 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 773

Query: 689 SVG 690
            +G
Sbjct: 774 DLG 775

[Close]

BLAST of CcUC04G066820 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.4e-79
Identity = 155/397 (39.04%), Postives = 235/397 (59.19%), Query Frame = 0


Query: 303 RFKFDAND--ISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELC 362
           RF +  N+  +SS +   ++ R    G Q H   ++ GF +NV+VGS L+ LY + G + 
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213

Query: 363 NAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACT 422
           +A  VF+ +  RN VSW A+IAG A        LELFQ M R   +P+ F++ ++  AC+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273

Query: 423 GSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNS 482
            +G L  G+ +H    K G        N L+ MY K G+I+ A  IF+ +  +DVVSWNS
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333

Query: 483 MIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVEL 542
           ++  YAQHG   +A+  F+ MR+   +  + I+FL VL++C H+GL++EG +Y+ LM + 
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRR-VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 393

Query: 543 GLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKA 602
           G+ PE  HY  V+DLLGRAG L  A  FI++MPI P + +W +LL+ACR+H N  +G  A
Sbjct: 394 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 453

Query: 603 AERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYR 662
           AE    L P+    H+ L N+YA  G  +D AR+RK MK+ G+K  P  SW+EI+N ++ 
Sbjct: 454 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 513

Query: 663 FKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEVDEV 698
           F A D+ +P   EI    + ++  ++ +G V +   V
Sbjct: 514 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHV 549

[Close]

BLAST of CcUC04G066820 vs. ExPASy TrEMBL
Match: A0A6J1IKW6 (pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita maxima OX=3661 GN=LOC111477972 PE=4 SV=1)

HSP 1 Score: 915.2 bits (2364), Expect = 1.6e-262
Identity = 453/527 (85.96%), Postives = 486/527 (92.22%), Query Frame = 0


Query: 180 IRPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNV 239
           +R LH+LF ISQSSALL RHGFHIV SIRLFS FK     TTNLPKPPRLL+LISPKGN 
Sbjct: 3   VRLLHMLFVISQSSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKGNA 62

Query: 240 ASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQL 299
           ASES QTHLRLI+DFL+TDSDQCRSQTL+DGFDS SV L+KDSS VLDQERESGHWD QL
Sbjct: 63  ASESRQTHLRLIKDFLQTDSDQCRSQTLSDGFDSDSVFLSKDSSSVLDQERESGHWDFQL 122

Query: 300 FAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGEL 359
           FAGRF+FDANDISS LSLC S+RNLRGGIQYHSVAIRTGFIANVYVGS+LVSLYGKC E+
Sbjct: 123 FAGRFEFDANDISSALSLCCSQRNLRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCCEM 182

Query: 360 CNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNAC 419
            +A QVF+EMPVRNVVSWTAIIAGFA EWQV MCLELFQ+M+RMALQPNEFTF TIL+AC
Sbjct: 183 TDACQVFDEMPVRNVVSWTAIIAGFAQEWQVDMCLELFQRMRRMALQPNEFTFATILSAC 242

Query: 420 TGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWN 479
           TGSGALGVGRSLHCQTFKMG DS +HIAN LISMYCKCGA+N A+Y+FEAMEVKD VSWN
Sbjct: 243 TGSGALGVGRSLHCQTFKMGFDSHVHIANALISMYCKCGALNFAVYLFEAMEVKDTVSWN 302

Query: 480 SMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVE 539
           SMIAGYAQHGLSL+AI+LF+AMRKQ+QVEAD ITFLGVLSSCRH GLVEEGRYYFNLMVE
Sbjct: 303 SMIAGYAQHGLSLKAIDLFEAMRKQQQVEADGITFLGVLSSCRHGGLVEEGRYYFNLMVE 362

Query: 540 LGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLK 599
           L LKPELDHYSCVIDLLGRAGLLKEAQNFI+KMPISPNSIVWGSLLSACRLHGNVWIGLK
Sbjct: 363 LALKPELDHYSCVIDLLGRAGLLKEAQNFIEKMPISPNSIVWGSLLSACRLHGNVWIGLK 422

Query: 600 AAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVY 659
           AAE RLLLQP+CASTHLQLANLYA+AGYL+D ARLRKMMKDKGLKTAPGYSWIEIQNKVY
Sbjct: 423 AAESRLLLQPDCASTHLQLANLYARAGYLEDAARLRKMMKDKGLKTAPGYSWIEIQNKVY 482

Query: 660 RFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEV-DEVDDVLLPTS 706
           RFKAEDKSNPVM+EIFG+MD +VNHMRSV CV EV DE++D LL  S
Sbjct: 483 RFKAEDKSNPVMIEIFGVMDGMVNHMRSVDCVPEVDDELEDALLAKS 529

[Close]

BLAST of CcUC04G066820 vs. ExPASy TrEMBL
Match: A0A6J1GDY6 (pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita moschata OX=3662 GN=LOC111453122 PE=4 SV=1)

HSP 1 Score: 912.9 bits (2358), Expect = 8.2e-262
Identity = 453/527 (85.96%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 180 IRPLHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNV 239
           +R LH+LF IS SSALL RHGFHIV SIRLFS FK     TTNLPKPPRLL+LISPKGN 
Sbjct: 3   VRLLHMLFVISASSALLCRHGFHIVTSIRLFSYFKRNTRPTTNLPKPPRLLDLISPKGNA 62

Query: 240 ASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQL 299
           ASES QTHLRLI+DFLRTDSDQCRSQTL+DGFDS SV L+KDSS V DQERESGHW  QL
Sbjct: 63  ASESRQTHLRLIKDFLRTDSDQCRSQTLSDGFDSDSVFLSKDSSSVRDQERESGHWGFQL 122

Query: 300 FAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGEL 359
           FAGRF+FDANDISS LSLC S+RN RGGIQYHSVAIRTGFIANVYVGS+LVSLYGKC E+
Sbjct: 123 FAGRFEFDANDISSALSLCCSQRNRRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCWEM 182

Query: 360 CNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNAC 419
            +A QVF+EMPVRNVVSWTAIIAGFA EWQV MCLELFQ+M+RMALQPNEFTF TIL+AC
Sbjct: 183 NDACQVFDEMPVRNVVSWTAIIAGFAQEWQVDMCLELFQRMRRMALQPNEFTFATILSAC 242

Query: 420 TGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWN 479
           TGSGALGVGRSLHCQTFKMG DS +HIAN LISMYCKCGA+N A+Y+FEAMEVKD VSWN
Sbjct: 243 TGSGALGVGRSLHCQTFKMGFDSHVHIANALISMYCKCGALNFAVYLFEAMEVKDTVSWN 302

Query: 480 SMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVE 539
           S+IAGYAQHGLSLQAI+LFKAMRKQ+QVEAD ITFLGVLSSCRH GLVEEGRYYFNLMVE
Sbjct: 303 SIIAGYAQHGLSLQAIDLFKAMRKQQQVEADGITFLGVLSSCRHGGLVEEGRYYFNLMVE 362

Query: 540 LGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLK 599
           LGLKPELDHYSCVIDLLGRAGLLKEAQN I+ MPISPNSIVWGSLLSACRLHGNVWIGLK
Sbjct: 363 LGLKPELDHYSCVIDLLGRAGLLKEAQNLIENMPISPNSIVWGSLLSACRLHGNVWIGLK 422

Query: 600 AAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVY 659
           AAE RLLLQP+CASTHLQLANLYA+AGYLDD ARLRKMMKDKGLKTAPGYSWIEIQNKVY
Sbjct: 423 AAESRLLLQPDCASTHLQLANLYARAGYLDDAARLRKMMKDKGLKTAPGYSWIEIQNKVY 482

Query: 660 RFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEVD-EVDDVLLPTS 706
           RFKAEDKSNPVM+EIFG+MD +VNHMRSVGCV EVD E++D LL TS
Sbjct: 483 RFKAEDKSNPVMIEIFGVMDGMVNHMRSVGCVPEVDNELEDALLATS 529

[Close]

BLAST of CcUC04G066820 vs. ExPASy TrEMBL
Match: A0A1S3BGK7 (pentatricopeptide repeat-containing protein At2g37320 OS=Cucumis melo OX=3656 GN=LOC103489779 PE=4 SV=1)

HSP 1 Score: 907.9 bits (2345), Expect = 2.6e-260
Identity = 452/524 (86.26%), Postives = 483/524 (92.18%), Query Frame = 0


Query: 183 LHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNVASE 242
           LH+LFAISQSSA  YRHGF++V S+R FSNFK   H TTNLPKP RLL+LISPKG+V+ E
Sbjct: 6   LHMLFAISQSSA-RYRHGFNVVPSVRFFSNFKSNTHPTTNLPKPLRLLDLISPKGDVSYE 65

Query: 243 SCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQLFAG 302
           S QTHLRLIQDFL+TD DQCRSQTL+ GFDS SV L+KDSSFVLDQE ESGHWD+Q FAG
Sbjct: 66  SRQTHLRLIQDFLQTDPDQCRSQTLSVGFDSRSVGLSKDSSFVLDQECESGHWDVQSFAG 125

Query: 303 RFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNA 362
           RFKF ANDISS LSLC+S+RNLRGG+QYHSVAIRTGFIANVYVGS+LVSLYGKCGEL NA
Sbjct: 126 RFKFSANDISSVLSLCNSQRNLRGGLQYHSVAIRTGFIANVYVGSSLVSLYGKCGELSNA 185

Query: 363 YQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACTGS 422
           YQ+F+EMPVRNVVSWTAIIAGFAVEWQV MCLELF++MKRMALQPNEFTF TIL ACTGS
Sbjct: 186 YQMFDEMPVRNVVSWTAIIAGFAVEWQVNMCLELFEEMKRMALQPNEFTFVTILTACTGS 245

Query: 423 GALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMI 482
           GALGVGRSLHCQTFKMG  S LHIAN LISMYCKCGA+N ALYIFEAMEVKD VSWNSMI
Sbjct: 246 GALGVGRSLHCQTFKMGFHSYLHIANALISMYCKCGALNFALYIFEAMEVKDTVSWNSMI 305

Query: 483 AGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVELGL 542
           AGYAQHGLS +AI+LFKAMRKQKQVEADAITFLGVLSSCRHAG VEEGR+YFNLMVELGL
Sbjct: 306 AGYAQHGLSHRAIDLFKAMRKQKQVEADAITFLGVLSSCRHAGFVEEGRHYFNLMVELGL 365

Query: 543 KPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAE 602
           KPELDHYSCVIDLLGRAGLLKEAQNFI+KMP+SPNSI+WGSLLSACRLHGNVWIGLKAAE
Sbjct: 366 KPELDHYSCVIDLLGRAGLLKEAQNFIEKMPMSPNSIIWGSLLSACRLHGNVWIGLKAAE 425

Query: 603 RRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFK 662
            RLLLQP+CASTHLQL  LYAKAGYLDD ARLRK+MKDKGLKTAPGYSWIEIQNKVYRFK
Sbjct: 426 SRLLLQPDCASTHLQLTKLYAKAGYLDDAARLRKIMKDKGLKTAPGYSWIEIQNKVYRFK 485

Query: 663 AEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEV-DEVDDVLLPTS 706
           AEDKSNP+MVEIFGLMD +VNHMR VG  HE+ DEVDDVLL TS
Sbjct: 486 AEDKSNPLMVEIFGLMDCMVNHMRFVGFDHELEDEVDDVLLATS 528

[Close]

BLAST of CcUC04G066820 vs. ExPASy TrEMBL
Match: A0A5A7U1F7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001370 PE=4 SV=1)

HSP 1 Score: 903.3 bits (2333), Expect = 6.5e-259
Identity = 450/522 (86.21%), Postives = 481/522 (92.15%), Query Frame = 0


Query: 185 LLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNVASESC 244
           +LFAISQSSA  YRHGF++V S+R FSNFK   H TTNLPKP RLL+LISPKG+V+ ES 
Sbjct: 1   MLFAISQSSA-RYRHGFNVVPSVRFFSNFKSNTHPTTNLPKPLRLLDLISPKGDVSYESR 60

Query: 245 QTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQLFAGRF 304
           QTHLRLIQDFL+TD DQCRSQTL+ GFDS SV L+KDSSFVLDQE ESGHWD+Q FAGRF
Sbjct: 61  QTHLRLIQDFLQTDPDQCRSQTLSVGFDSRSVGLSKDSSFVLDQECESGHWDVQSFAGRF 120

Query: 305 KFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNAYQ 364
           KF ANDISS LSLC+S+RNLRGG+QYHSVAIRTGFIANVYVGS+LVSLYGKCGEL NAYQ
Sbjct: 121 KFSANDISSVLSLCNSQRNLRGGLQYHSVAIRTGFIANVYVGSSLVSLYGKCGELSNAYQ 180

Query: 365 VFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACTGSGA 424
           +F+EMPVRNVVSWTAIIAGFAVEWQV MCLELF++MKRMALQPNEFTF TIL ACTGSGA
Sbjct: 181 MFDEMPVRNVVSWTAIIAGFAVEWQVNMCLELFEEMKRMALQPNEFTFVTILTACTGSGA 240

Query: 425 LGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMIAG 484
           LGVGRSLHCQTFKMG  S LHIAN LISMYCKCGA+N ALYIFEAMEVKD VSWNSMIAG
Sbjct: 241 LGVGRSLHCQTFKMGFHSYLHIANALISMYCKCGALNFALYIFEAMEVKDTVSWNSMIAG 300

Query: 485 YAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVELGLKP 544
           YAQHGLS +AI+LFKAMRKQKQVEADAITFLGVLSSCRHAG VEEGR+YFNLMVELGLKP
Sbjct: 301 YAQHGLSHRAIDLFKAMRKQKQVEADAITFLGVLSSCRHAGFVEEGRHYFNLMVELGLKP 360

Query: 545 ELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAERR 604
           ELDHYSCVIDLLGRAGLLKEAQNFI+KMP+SPNSI+WGSLLSACRLHGNVWIGLKAAE R
Sbjct: 361 ELDHYSCVIDLLGRAGLLKEAQNFIEKMPMSPNSIIWGSLLSACRLHGNVWIGLKAAESR 420

Query: 605 LLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFKAE 664
           LLLQP+CASTHLQL  LYAKAGYLDD ARLRK+MKDKGLKTAPGYSWIEIQNKVYRFKAE
Sbjct: 421 LLLQPDCASTHLQLTKLYAKAGYLDDAARLRKIMKDKGLKTAPGYSWIEIQNKVYRFKAE 480

Query: 665 DKSNPVMVEIFGLMDSIVNHMRSVGCVHEV-DEVDDVLLPTS 706
           DKSNP+MVEIFGLMD +VNHMR VG  HE+ DEVDDVLL TS
Sbjct: 481 DKSNPLMVEIFGLMDCMVNHMRFVGFDHELEDEVDDVLLATS 521

[Close]

BLAST of CcUC04G066820 vs. ExPASy TrEMBL
Match: A0A0A0KX36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293100 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 5.5e-258
Identity = 443/514 (86.19%), Postives = 476/514 (92.61%), Query Frame = 0


Query: 183 LHLLFAISQSSALLYRHGFHIVASIRLFSNFKPKFHSTTNLPKPPRLLELISPKGNVASE 242
           LH+LF ISQSSA  YRHGF+++ SIR FSNFK   H TTNLPKPPRLL+LISPKG+V+ E
Sbjct: 6   LHMLFPISQSSA-PYRHGFNVLPSIRFFSNFKSNTHPTTNLPKPPRLLDLISPKGDVSYE 65

Query: 243 SCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLDQERESGHWDLQLFAG 302
           S QTHLRLIQDFL+TDS QCRSQTL  G DS S+ L+KDSSFVLDQE ESGHWD+Q FAG
Sbjct: 66  SRQTHLRLIQDFLQTDSGQCRSQTLPVGCDSRSIGLSKDSSFVLDQECESGHWDVQSFAG 125

Query: 303 RFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNA 362
           RFKF+ANDISS LSLC+S+RNLRGGIQYHSVAIRTGFIANVYVGS+LVSLYGKCGEL NA
Sbjct: 126 RFKFNANDISSVLSLCNSQRNLRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCGELSNA 185

Query: 363 YQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACTGS 422
           Y+VF+EMPVRNVVSWTAIIAGFAVEWQV MCLELFQ+MKRMALQPNEFTF TIL ACTGS
Sbjct: 186 YRVFDEMPVRNVVSWTAIIAGFAVEWQVNMCLELFQEMKRMALQPNEFTFVTILTACTGS 245

Query: 423 GALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMI 482
           GALGVGRSLHCQT KMG  S LH+AN LISMYCKCGA+N ALYIFEAMEVKD VSWNSMI
Sbjct: 246 GALGVGRSLHCQTVKMGFHSYLHVANALISMYCKCGALNFALYIFEAMEVKDTVSWNSMI 305

Query: 483 AGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVELGL 542
           AGYAQHGLSL+AI+LFKAMRKQKQVEADAITFLGVLSSCRHAG VEEGR+YFNLMVELGL
Sbjct: 306 AGYAQHGLSLRAIDLFKAMRKQKQVEADAITFLGVLSSCRHAGFVEEGRHYFNLMVELGL 365

Query: 543 KPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAE 602
           KPELDHYSCVIDLLGRAGLLKEAQNFI+KMPI+PNSIVWGSLLSACRLHGNVWIGLKAAE
Sbjct: 366 KPELDHYSCVIDLLGRAGLLKEAQNFIEKMPITPNSIVWGSLLSACRLHGNVWIGLKAAE 425

Query: 603 RRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFK 662
            RLLLQP+CASTHLQL NLYAKAGYLDD ARLRK+MKDKGLKTAPGYSWIEIQNKVYRFK
Sbjct: 426 SRLLLQPDCASTHLQLTNLYAKAGYLDDAARLRKIMKDKGLKTAPGYSWIEIQNKVYRFK 485

Query: 663 AEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEVDE 697
           AEDKSNP+MVEIFGL+D +VNHMR VGC HE+++
Sbjct: 486 AEDKSNPLMVEIFGLIDGMVNHMRFVGCAHELED 518

[Close]

BLAST of CcUC04G066820 vs. TAIR 10
Match: AT2G37320.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 514.6 bits (1324), Expect = 1.2e-145
Identity = 253/458 (55.24%), Postives = 335/458 (73.14%), Query Frame = 0


Query: 228 RLLELISPKGNVASESCQTHLRLIQDFLRTDSDQCRSQTLTDGFDSHSVVLTKDSSFVLD 287
           R+L++IS K    S   Q H   +Q+F +TDS + R Q +++ FD   +  TK+    + 
Sbjct: 44  RVLDIISSKSGGVSNR-QDHFGFVQEFRQTDSWRFRGQAISEDFD---LSRTKNGVSSVL 103

Query: 288 QERESGHWDLQLFAGRFKFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGS 347
           +E         +    + FDA  +SS +  C   R+ R G  +H +A++ GFI++VY+GS
Sbjct: 104 EEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGS 163

Query: 348 TLVSLYGKCGELCNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQP 407
           +LV LY   GE+ NAY+VFEEMP RNVVSWTA+I+GFA EW+V +CL+L+ +M++    P
Sbjct: 164 SLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDP 223

Query: 408 NEFTFTTILNACTGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIF 467
           N++TFT +L+ACTGSGALG GRS+HCQT  MGL S LHI+N LISMYCKCG +  A  IF
Sbjct: 224 NDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF 283

Query: 468 EAMEVKDVVSWNSMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLV 527
           +    KDVVSWNSMIAGYAQHGL++QAI LF+ M  +   + DAIT+LGVLSSCRHAGLV
Sbjct: 284 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 343

Query: 528 EEGRYYFNLMVELGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSA 587
           +EGR +FNLM E GLKPEL+HYSC++DLLGR GLL+EA   I+ MP+ PNS++WGSLL +
Sbjct: 344 KEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFS 403

Query: 588 CRLHGNVWIGLKAAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAP 647
           CR+HG+VW G++AAE RL+L+P+CA+TH+QLANLYA  GY  + A +RK+MKDKGLKT P
Sbjct: 404 CRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNP 463

Query: 648 GYSWIEIQNKVYRFKAEDKSNPVMVEIFGLMDSIVNHM 686
           G SWIEI N V+ FKAED SN  M+EI  ++  +++HM
Sbjct: 464 GCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497

[Close]

BLAST of CcUC04G066820 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 302.8 bits (774), Expect = 7.4e-82
Identity = 149/363 (41.05%), Postives = 229/363 (63.09%), Query Frame = 0


Query: 342 NVYVGSTLVSLYGKCGELCNAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMK 401
           NV   +T+++ Y +CG++  A  +F++MP R+ VSW A+IAG++        L LF QM+
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

Query: 402 RMALQPNEFTFTTILNACTGSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAIN 461
           R   + N  +F++ L+ C    AL +G+ LH +  K G ++   + N L+ MYCKCG+I 
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461

Query: 462 LALYIFEAMEVKDVVSWNSMIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSC 521
            A  +F+ M  KD+VSWN+MIAGY++HG    A+  F++M K++ ++ D  T + VLS+C
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM-KREGLKPDDATMVAVLSAC 521

Query: 522 RHAGLVEEGRYYFNLMV-ELGLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIV 581
            H GLV++GR YF  M  + G+ P   HY+C++DLLGRAGLL++A N +K MP  P++ +
Sbjct: 522 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 581

Query: 582 WGSLLSACRLHGNVWIGLKAAERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKD 641
           WG+LL A R+HGN  +   AA++   ++P  +  ++ L+NLYA +G   DV +LR  M+D
Sbjct: 582 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 641

Query: 642 KGLKTAPGYSWIEIQNKVYRFKAEDKSNPVMVEIFGLMDSIVNHMRSVGCV-------HE 697
           KG+K  PGYSWIEIQNK + F   D+ +P   EIF  ++ +   M+  G V       H+
Sbjct: 642 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 701

[Close]

BLAST of CcUC04G066820 vs. TAIR 10
Match: AT2G40720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 302.4 bits (773), Expect = 9.7e-82
Identity = 152/382 (39.79%), Postives = 242/382 (63.35%), Query Frame = 0


Query: 305 KFDANDISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNAYQ 364
           K D++ ++S  + C+    LR G+Q H   I+TG + NV+VGS+L+ LY KCG    A +
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532

Query: 365 VFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACTGSGA 424
           VF  M   N+V+W ++I+ ++      + ++LF  M    + P+  + T++L A + + +
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTAS 592

Query: 425 LGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMIAG 484
           L  G+SLH  T ++G+ S  H+ N LI MY KCG    A  IF+ M+ K +++WN MI G
Sbjct: 593 LLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 652

Query: 485 YAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLM-VELGLK 544
           Y  HG  + A++LF  M+K  +   D +TFL ++S+C H+G VEEG+  F  M  + G++
Sbjct: 653 YGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 712

Query: 545 PELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAER 604
           P ++HY+ ++DLLGRAGLL+EA +FIK MPI  +S +W  LLSA R H NV +G+ +AE+
Sbjct: 713 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 772

Query: 605 RLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFKA 664
            L ++P   ST++QL NLY +AG  ++ A+L  +MK+KGL   PG SWIE+ ++   F +
Sbjct: 773 LLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFS 832

Query: 665 EDKSNPVMVEIFGLMDSIVNHM 686
              S+P+  EIF +++ + ++M
Sbjct: 833 GGSSSPMKAEIFNVLNRLKSNM 853

[Close]

BLAST of CcUC04G066820 vs. TAIR 10
Match: AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.7 bits (761), Expect = 2.4e-80
Identity = 138/363 (38.02%), Postives = 242/363 (66.67%), Query Frame = 0


Query: 329 QYHSVAIRTGFIANVYVGSTLVSLYGKCGELCNAYQVFEEMPVRNVVSWTAIIAGFAVEW 388
           + H+  ++T +  +  VG+ L+  Y K G++  A +VF  +  +++V+W+A++AG+A   
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473

Query: 389 QVGMCLELFQQMKRMALQPNEFTFTTILNACTGSGA-LGVGRSLHCQTFKMGLDSCLHIA 448
           +    +++F ++ +  ++PNEFTF++ILN C  + A +G G+  H    K  LDS L ++
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533

Query: 449 NVLISMYCKCGAINLALYIFEAMEVKDVVSWNSMIAGYAQHGLSLQAINLFKAMRKQKQV 508
           + L++MY K G I  A  +F+    KD+VSWNSMI+GYAQHG +++A+++FK M+K+K V
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK-V 593

Query: 509 EADAITFLGVLSSCRHAGLVEEGRYYFNLMV-ELGLKPELDHYSCVIDLLGRAGLLKEAQ 568
           + D +TF+GV ++C HAGLVEEG  YF++MV +  + P  +H SC++DL  RAG L++A 
Sbjct: 594 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 653

Query: 569 NFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKAAERRLLLQPNCASTHLQLANLYAKAG 628
             I+ MP    S +W ++L+ACR+H    +G  AAE+ + ++P  ++ ++ L+N+YA++G
Sbjct: 654 KVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 713

Query: 629 YLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYRFKAEDKSNPVMVEIFGLMDSIVNHMR 688
              + A++RK+M ++ +K  PGYSWIE++NK Y F A D+S+P+  +I+  ++ +   ++
Sbjct: 714 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 773

Query: 689 SVG 690
            +G
Sbjct: 774 DLG 775

[Close]

BLAST of CcUC04G066820 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 3.1e-80
Identity = 155/397 (39.04%), Postives = 235/397 (59.19%), Query Frame = 0


Query: 303 RFKFDAND--ISSGLSLCSSRRNLRGGIQYHSVAIRTGFIANVYVGSTLVSLYGKCGELC 362
           RF +  N+  +SS +   ++ R    G Q H   ++ GF +NV+VGS L+ LY + G + 
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213

Query: 363 NAYQVFEEMPVRNVVSWTAIIAGFAVEWQVGMCLELFQQMKRMALQPNEFTFTTILNACT 422
           +A  VF+ +  RN VSW A+IAG A        LELFQ M R   +P+ F++ ++  AC+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273

Query: 423 GSGALGVGRSLHCQTFKMGLDSCLHIANVLISMYCKCGAINLALYIFEAMEVKDVVSWNS 482
            +G L  G+ +H    K G        N L+ MY K G+I+ A  IF+ +  +DVVSWNS
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333

Query: 483 MIAGYAQHGLSLQAINLFKAMRKQKQVEADAITFLGVLSSCRHAGLVEEGRYYFNLMVEL 542
           ++  YAQHG   +A+  F+ MR+   +  + I+FL VL++C H+GL++EG +Y+ LM + 
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRR-VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 393

Query: 543 GLKPELDHYSCVIDLLGRAGLLKEAQNFIKKMPISPNSIVWGSLLSACRLHGNVWIGLKA 602
           G+ PE  HY  V+DLLGRAG L  A  FI++MPI P + +W +LL+ACR+H N  +G  A
Sbjct: 394 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 453

Query: 603 AERRLLLQPNCASTHLQLANLYAKAGYLDDVARLRKMMKDKGLKTAPGYSWIEIQNKVYR 662
           AE    L P+    H+ L N+YA  G  +D AR+RK MK+ G+K  P  SW+EI+N ++ 
Sbjct: 454 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 513

Query: 663 FKAEDKSNPVMVEIFGLMDSIVNHMRSVGCVHEVDEV 698
           F A D+ +P   EI    + ++  ++ +G V +   V
Sbjct: 514 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHV 549

The following BLAST results are available for this feature:

BLAST of CcUC04G066820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881286.1	3.5e-267	87.07	pentatricopeptide repeat-containing protein At2g37320 isoform X1 [Benincasa hisp...	[more]
KAG6603691.1	8.9e-263	86.34	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022977771.1	3.4e-262	85.96	pentatricopeptide repeat-containing protein At2g37320 [Cucurbita maxima]	[more]
XP_022949850.1	1.7e-261	85.96	pentatricopeptide repeat-containing protein At2g37320 [Cucurbita moschata]	[more]
XP_023544680.1	2.2e-261	85.77	pentatricopeptide repeat-containing protein At2g37320 [Cucurbita pepo subsp. pep...	[more]

BLAST of CcUC04G066820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUT4	1.8e-144	55.24	Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	1.0e-80	41.05	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q7XJN6	1.4e-80	39.79	Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX...	[more]
Q9ZUW3	3.4e-79	38.02	Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX...	[more]
Q9LIQ7	4.4e-79	39.04	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]

BLAST of CcUC04G066820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKW6	1.6e-262	85.96	pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GDY6	8.2e-262	85.96	pentatricopeptide repeat-containing protein At2g37320 OS=Cucurbita moschata OX=3...	[more]
A0A1S3BGK7	2.6e-260	86.26	pentatricopeptide repeat-containing protein At2g37320 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7U1F7	6.5e-259	86.21	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KX36	5.5e-258	86.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293100 PE=4 SV=1	[more]

BLAST of CcUC04G066820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37320.1	1.2e-145	55.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	7.4e-82	41.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G40720.1	9.7e-82	39.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G27610.1	2.4e-80	38.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G24000.1	3.1e-80	39.04	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 548..572 e-value: 0.025 score: 14.8 coord: 618..643 e-value: 0.17 score: 12.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 372..419 e-value: 1.2E-12 score: 47.8 coord: 473..521 e-value: 1.4E-9 score: 38.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 476..505 e-value: 2.0E-4 score: 19.3 coord: 513..544 e-value: 2.5E-4 score: 19.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 510..544 score: 9.339086
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 474..508 score: 10.106377
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 373..407 score: 9.492543
None	No IPR available	GENE3D	2.30.30.140		coord: 77..127 e-value: 2.5E-5 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..174
None	No IPR available	PANTHER	PTHR47929:SF5	SUBFAMILY NOT NAMED	coord: 218..696
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 218..696
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 524..674 e-value: 1.4E-15 score: 59.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 432..523 e-value: 3.2E-19 score: 71.0 coord: 301..427 e-value: 2.9E-22 score: 80.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G066820.1	CcUC04G066820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding