CcUC04G066610 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G066610
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 23531638 .. 23534325 (+)
RNA-Seq ExpressionCcUC04G066610
SyntenyCcUC04G066610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGTACTATGAATTCTCTCCTTAATGGTACTTGGAAACACAACACTAACCAGATTCAACAAAAGATATCAAAGCATAATAGGTCTACCTGTTCGAAACTACGTAGGGTGTGCACCAATCGGTCGACATCGGTTTTGGGCAAAAACAGACACCGGCCACCAACAGGTTGGTTTCCAAAGAAACAGAAGACAATTAATTCACACAAAACAGATATTCACACTGATTCAGTACAAATGCAAAGACAAAAGAAATTAATTTTATTCTGAAGAAACGGAAGACAATTGTAATTCACACAGAACGGATATTGTCCATTACAGAATAATGGAAGTACAAACAGAAGATACATTTTCATAAATTACCACCTACCGGCTGAGAGGCCAAAATTTGACAGTTGCTTTTGTCCTGATTCTTTAGGTTGCTTTTATTGTAGGGGAACCGATCCATAGAACACTACTTCGGCTGGTCCCGTCATGTATACGTGGTTGTCTTGCTCGCTCCACTCTATCTGTAATGGTCCTCCAGGCAGATCAACGGTGCAATTCTGTCTCGAGATATTTGAATCTAACGTTAGGAAATTAAAGCAAAGAAAGGATTGAAATTTGCATCATTTTTGTTTTTTTTTTCTGTTTATATAACCATACTGTGTGATTATACTGATGAAACTAAATTATATTATTGCTGTTGAGGTTAAAAGATGCACATGATCTTCTTACCCGTCCAGCACGACCTTCAAGAACTGCTGCAACAACGACCGCACAGGCTCCGGTTCCACAAGCAAGTGTCGCACCTGTAGCATCATTGAGAAGTACACAGGTTCTTTATGAAGTGGTACAATATATATATATGCTTGTAACTTTAAATTATCTTAATTATATTAATTTTGAACCTGCACCACGCTCCCACACACGCATTTTAAGGTGCAAATTGGAGAAGACTTGCACAAATTCTGTAGGAGCAGGGTAAAAGGAGCATCTCAGTAAACATAAAAGTAAAAAGATTACATCCGTAGAAAGGGAAGGGAAGACCCTCTAAATGGTTGGAAAATATCACATTTGCTCAAAGATATACATCTCAACCACAAAAAGCTGAAATTCCAAACTTGCTAAAAAACCAACCCGTATTTGTTCGTGCTGGAAACATCTCATGATGTTCAAATTTTGGACCAATTGCAGCTAAGTTTATGTCATCGACCTGCAGATTCTGTTCATGACCTTGCTAAAGTCAGCACAAATAGTAAATGAACGGTAAAATTGTACTTGTACCCCAACAGAATGACTATAGGCAGTCAAATGTAACTCAAGACTCTATGAAGTTGGATTGCCGAGTTTAGACTGTTGTAAGCTAATTTTAGATCGAAGGAGCAAAAAAATTATTTAAATGTCAGAGGAGCATAGCCATCAACAGAGGCTTCCTCATAACTTTGTATTGCTTCTTAATTTAATTGTATTCCTTGGTTCATAAAGGCACTTATAGGCTATATCTAATATTACAACATTGAACACATCTCAATCAATCAACTAAATTATGATAAATACAACATATGTATTTATGGAGCCTACAAAGTACTCACAAATTCTTTTACTTAATATTAAAGTGTAACTCATTGTCTCTAATCTACTAAATCACGTACACAATATATACAACTTGCTATGTGATTATATTTAAGTAAGAGAAAGAAAACACAAGGGCAAGCCACAGTAATCCACATTAGGAACTTTAAAAAGCTTTTGAAGAGTGAATGGGATGTTGCAAAATGTACTTCTAAACAACTACCTGCTCAGTTTTATTGCCAAAAGTTACACAATGAGGGTTTCCCATACTGACACAGGTCACGCTCCATGCAACTCCATCTACTTCTATGTCTGCCTTAACAACAGATTGGTCTGAAGTTGGTGTCAATCGGGTAGGCACATCTGATGCTTTGAGAATTGGTTCGCCCATGTCTACTTTTACCTGAAATTGCATATACGTTAAGATCGGGTAGGCACATCTGATTGCATTTGCCAATGAAAAAATGTTATATTAAGCCTTTAAAAGGTAATTAAAAATGCAGAAGAAACCACAATTTGATGGAGAAAAATGAAAGAACGTACAAGAGAATACAATAGACAAGCCCATAAAAGAGATCTCCAAACTAATTACAAGAAGCCCAGTGAACGATGCCCAAAGAGAAGCATTAACCTAAAAACCTCCCAACTGCTTCCCAAGTTTTCTAAAAAATTGAAACAGCAGTTGACTTTAGATTAGAGAATCTATCGAAGTATACCTGTCCATCATCCTGAAGTTCTGGAATAATAAGACCAGCACCAGTATGAACAGTGAAACTGCAAGAGTATCAACAAAAATGCTGCGCTCAGAAATTTGAATGCATAAATATACATGAAACAAAAGACCTTAGGTATCATAATTAAATTAGTTTCATATCTATACTACCCAAGGAAACAGATTTCTAAGCCCAGGACCAGGAATCTAAAGCAAACGCTCATTTTTTAAATCTTTAAATTTTAATTGTGTCTTGACAGGGCTATACTACGTTGAAATTCACAAGAAGGTATGCACAAATGGCCTCAAAAGATAAAACAATAGCAAAACAGAAAGAAGATCTACCTATGCCTTCCCTGCAAATTCTCAAGCTCTGCAATAAATCTGGCAAAGCACCGTACTCCATTACCACACATCTATAA

mRNA sequence

ATGACAGATGCACATGATCTTCTTACCCGTCCAGCACGACCTTCAAGAACTGCTGCAACAACGACCGCACAGGCTCCGGTTCCACAAGCAAGTGTCGCACCTGTAGCATCATTGAGAAGTACACAGGGCTATACTACGTTGAAATTCACAAGAAGGTATGCACAAATGGCCTCAAAAGATAAAACAATAGCAAAACAGAAAGAAGATCTACCTATGCCTTCCCTGCAAATTCTCAAGCTCTGCAATAAATCTGGCAAAGCACCGTACTCCATTACCACACATCTATAA

Coding sequence (CDS)

ATGACAGATGCACATGATCTTCTTACCCGTCCAGCACGACCTTCAAGAACTGCTGCAACAACGACCGCACAGGCTCCGGTTCCACAAGCAAGTGTCGCACCTGTAGCATCATTGAGAAGTACACAGGGCTATACTACGTTGAAATTCACAAGAAGGTATGCACAAATGGCCTCAAAAGATAAAACAATAGCAAAACAGAAAGAAGATCTACCTATGCCTTCCCTGCAAATTCTCAAGCTCTGCAATAAATCTGGCAAAGCACCGTACTCCATTACCACACATCTATAA

Protein sequence

MTDAHDLLTRPARPSRTAATTTAQAPVPQASVAPVASLRSTQGYTTLKFTRRYAQMASKDKTIAKQKEDLPMPSLQILKLCNKSGKAPYSITTHL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G066610.1CcUC04G066610.1mRNA