CcUC04G066540 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G066540
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionHistone H2A
LocationCicolChr04: 23453617 .. 23460519 (+)
RNA-Seq ExpressionCcUC04G066540
SyntenyCcUC04G066540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCGTCGCAGTGGTTTTCTCTTTTTAGTCGGCCGATCGAATTCGATGGCTTTCTTCTCCACCGTAAGGCGCGTTCTCAATGGATCTTCTTCTTCTTCTTCCTCCATTTTACGATCCCAGTGGACTGCCGTTCGTCTCAGCTCAACTCTCACATCCCCAAAGCTCTTCATTAGTGGTACGTCTCACAGAAAAATAAAAAACAGAGAATCATCTTGTGACGCCTTTCTTCTTATTTGGATTATTGAGAATGATTCGGAAATTTGGTAATGGAATCAATTTTCTGTTTGGATGCTGATTTTTTTTTTTTGAAATTTTTGGTAATGGGATCGATTTTCGGAGCACTAAATGCGATCCAGTTAATCAGCGATTCTTTGTTCTGTTGCATTCCTTTTATTTCTGGTCCTTTTCTTCGATTGGATGCGTCTTTTCCTATTTGCATACATGAAATTACTTCACTCTTCAGTGGTGGGGATTGTTCTAGCGTAGGAAATTAGAAATTTATTTCGATCTTAATAGTAGTTATCATTTATCAATACGTAGATTTGTGTGCCTGCTTCATAGCTTAAGGACATCACAAGTTCCAAGAAATATTTGCTAACTATTAGAACACAAGGACATCACAAGTATACTCTCGTACAACTTATAGAACATATCCTGTTCAGGTAGGGTCGTAAGAATGCTTTGCTAATTCATTTCTTATGCGACACGATATGCCCGTTGCATTCAAAGGTTAGAATGAAGGGAGTAGGTACCATGGGAGTACTAAAATTTCCCCCTCCCCCCACCACAAAAAAATGCATTGATAAACCTTCTCATTTGCTAAAATTCATGAGACAGCACCCTCAATTCCTACATTTTCTATTGACAATTTAACACATTATTAAGTGGTATACATCATTTTATTTCATGGGCCTAGACCATTCTTAAATGCTTATGTTATGGAAGATAATGGATGAAGGTAGTATGAAAATAGTAGTACTAGAATTGTTCTTGTTGTAGTTGATATTAATGGACATGTGATGTTTTTCATAATGTAATATTCTTTATGAATCCAAAAATTGTAGAATATGGAAACAAATAACTTTCATTAGCATAAGGTTGATTAATTGCTGAACCACGATGAACTGAACTGTTTGATCTGTTTTGGATTGGATATGTCTTGAGAAAGTCTCATTCCTATAAAATGAACAGGTCTTTCAAGATTAACAACAGATGAGAAGCTCCAGGAAGCCTTTTCTTCATTTGGCCAGCTTGTAGAAGGTTTAATACTCTCTCTCCTTCTCTCCAATTTACAATTCTATGAACATTTGTCGCAGAGTGCAACATGATGACATTGCCTCAACATTTGTACAGCAAAGGTTATAACCGACAGGGCGACGGGAAGATCAAAAGGATTCGGCTTTGTAACCTACAGTACGATAGAAGAGGCTGAGAAAGCTAGAGAAGGAATGAATGCCAAGTTTCTGGATGGATGGGTTATTTTTGTTGATCCTGCCAAACCCAGGGAGCCTAGGCCACCTCCACAGCCTCAATCTGAGACCTCTGAATTTGGTATCAGAACAAACAAGACAATTGGTTGGTGTGGATGATTACTTGCAAAATATACGACATCTCATAGCATTTGGTCATTTTTTCCAATTGCATATGGTTGAGTTTGATGTATGTTCATCATCCAAGGGTACTATAGGTAAAATTTATGAGACAGCACCCTCAAGGGAGCCTCAAAATTGCCAGAAAGAGGGTATTTTTCTGTTATACGTATGGATTTGGATTTAGAAAAGTATTTACTGACCTTAGGTTTATTATTCATATTTTAATTCTTAACTTCTTATATGTATTTTGTTTTAGTTTTTACATCTAGTTATTCTATTTTGATCTCTAATTTTCTGTGGAAAATGAAAATCTATTTTGGTATTTATGTTTACATCTTAGACTATTGAATGTAGTATCATACCAGTATGTGTAAATCAAAATCTTAGGCCGGAGGGTGTGTTTTATTCCCCCATTTGATAATTATTTAGCCTCCATTTGAGAATTACTTGAATTTGGTTTTTGGTTTATGAAATCGTGCTTGTTTCCTCACCATTTCTTTATCATTTCTTTATCATGTTATCATCTTCCGGAGTAAATGTTTGAATTCGTAGTCAATTTTTAAAAACAAAATCTAGTTTTTGTTGAGAGTTGCCTAAGACAAGACCTAAGCCCAAAGGAGTTTGTGGGTCTCAATTCTCCCGAGTTTTGGGTTGATCAAGTGAGTTTATGGCGTTTCACCAAAGGGGCAATGATTGAACTAAGTTTTCCATTGACACTCTACAACCCTGAGGGTCACACCTATTTTAACACTGTCGATATTGTACATAACCCTAAGTGGTAGTTAAAGGATAAGTCTTATAAATAACCCATCAAGGGGTAAGCAGTTCTTTCTATGCTTAGTTTAGTTAAATACTTTTACTAACTTAGGCATCAAAGTGTCTTTAGCTTGAACATAGCAGTTCTCTTGCATGTTTGCTCAACGTGTCCAAACTAAAGGAGAGGATTGCTCTTGCATTTTTGCTCGAAGTGTCCAAACTGAAGGAGAGGATTGCTCTTGCATTTTTGCTCAAAGTGTCCAAACTAAAGGAGAGGATCGGAGGAGCTCCAAAGTCTTGTGCGAGTTCAACATTTTTAGAAACTGTTTCTTTAAAAAAAAAAAAAAAAAAACTTGGCTTAGATTTTAAATACTTCCTTGAATGTAGACAACAAAAGAAATAAACCAATAACTATAAGTAGAGGTAGCCCCGCTTAATTTTCAAAAATAAATAATAAAATAGTCTTTAAACTCTTTTTAGAAAATTTTCTAATTAAGTTAAAAGTATAAAAGTTTTAAAGTAAGAAAAATCAAAAACAATGTTTTGACCTCAAAATTCCACATATTACAAACAAGATAAAGCACTATCCAACAAAGTGAGCTTATTAGATTTGATCAAATAAAGTGTTAGGCCAAGAAGGTCTGACTTGTTCTTTAATTTGAGGACAAATGAGTTGCTCTTCCTATGAAGATCTTAAGAACCAATAGTCAATTATCAGTTGTAGCATATGCTGTGAAGAGTCTTTATATTTGCCTTCTATTGTTTATGTGTATGAGACAAATAAATTCATGAAATGGTACATTGCTTTAACTTACCATCTTATCTTGTTTCAGATCAAAATTAATTGGCTTACCTAACTCAACAAACTATGATAGACACATAAAAACCTAACTAGGATATATATACATATATACCAGCTTAGCTTAGTAAGATTTGACCAAATAGATTCATCATACTCATCATTTATCTAATTGGAGGAAGACATGTTTCCCACTCCTTTGGATTGCATATAATATATGATGGATTTGAATATACTATATTTTGGAGTAACTTAGGATTTAACCTGATATTTGAACTTTCATAAAAACAACGATTTAGTCTATGTATTTTTATTTGCAACAATTTAGTTTATGTATTTTTAAATTTGTGATAATTTAGTCTTTGGTTCCAATGTGTAATAATTTTGTTCATATACATTTTTAGAACAATTATCAACAAACTAACAATAGTTACTAAATTTAAAATTGTACATGGACTAAATTTGAACCTTTGAAAGTAAATAGGCTAGAACAAAACTAAAAAAATATGATGACCAAAATTGTATTTTAACTTAAAAACAATTAATATAGATACATTACAACCTCATTATGGTCCTTAAACTTTTAGATATATTCCTATTTCGACCCTTGTACCTTTACAATGTTTATTTCAACCTTTATATATTTCATAATTGAATTATTTTGGATAAGTGTATTTTGATTCATAATGTCACAGGGTGATCCCGATTCTTGTCTACAAGCCAATTGAACGAAAAATCTTTGGTTGATCTCCTAAGGCTGAGTCGAGGATGAACACTAATCATGAAACAAGGGTCCAACCTACTAAACTAGTAGGTCGAGTTGAGGCACATGGTCCTCCTCTTTTTATTTTTAGCCAATTTAAAGTACAACATGGCATATGTACCCGTGAAGAAAAGTCTAAATAAAAGGGACTCAACGTCCTACCACAAGCCTTTAAATTTTGAATATATATGTATCATGAATCCATTATACACATTTTTTTTTTTTTTTAATTCAGAGACCAAATAGATATAAATTTCAAAAGTTTATTTGTAACTTGTAGTTTGACAAAAATTTAATTAAGTTAAATTATATATATAAAAAAATGTCTTTGAACTTTTTCACGTGTTTAAAAAATACTCCTATACTTTTAGGAGTTACAATATTACTCCCTTCATTTTTCATAATAACAAAAGTTGTATTTGTTATATAGTTTAGCCGTAAAATTAAAATGAACAAAAAAAACAACGTCGTGTCCATGTCATCACGAATACAGCGTGTGTCATTCACTTTCCATTTTATTTCTCATTTCATAAAAATGTAATCTCCGTTGAAAACCGGTCGTTAACATCCCTCACATTTTCCCTCTTTTTCTGTTTGTTTCCCGAGAAAATTTTCTCTTCCAATGGACTCTGGCGTCAAGGCGAAGAAAGGCGTCGCCGGCAGAAGGGGCGGCGGTCCTAAGAAGAAGCCTGTCTCTCGCTCCGTCAAAGCCGGCCTCCAGTTTCCCGTCGGCAGAATCGGCCGCTACTTGAAGAATGGCCGCTACTCACGACGAGTCGGAACTGGCGCTCCGGTTTACCTTGCTGCTGTTCTTGAGTACCTCGCTGCAGAGGTGAATATAAACTACTTCGTTCTTCTCAGTTTTTCACTTTCGATTTACTTGATTTAGGGTTTCTTTTTTCAGCTTACTACATGTTTTGAATGCGTGTGCGAAATCAGAACTTTTATTCGATGGATTCGATGCTTGGATTGAAGTGCATTTTCTTTATTTCATGTCAATGACTTGGAATTTTTTTATTCTCTTAGCTCTTTCTTTTCGGAGATAAAATCCTCAATTTGATGGAATTAGGTCTTTCCTTTCATTCTATCTAATCTATTCTCTGATTTCTCTATGTGCTTTTGTTTGTATAGACAAGTCCATTCTAAGTTTTCAGACAATCTAGAAAGAAAGAAAAAAATCACCTAAAGTTTTTGTTTTTGTTTTTAGAAAAGAAATTTAAGGTCTGTTTGATATCAGTTTTACTTTTAATTTTCCGTTTTTGAAATTTACGTTAGTTTTCTCATTTTTATTTTTGTTTTCACATCTGGTAAAAGAACACTTGAATTACTGATCAAATTCTCAAAACAAGTATAAATTTTGGCGTGATTTTTCTAAGACATAAAGAATACAACGAGTGAATGTGGAAATAGTATTTTTAAGTTTAATTTTCTTTTTAATTTTTTTAATATTTTTTGAAAAATGAAAAATGAAATAGTTATTAAATGGGATTGGAATTATTTTCTAATGTTTACAATTTGAAAAATGATTTTGAATGAAAGTATTTTATGCAAGGAGAAAACTAAAAATAAAAACTTCATCAAACGCTAGTGATAAAAAAATAAAAAAACAGAAGTTTGTAAACAAATAATTTGATGAAAAGTAGAATTTATTTCAGGTGTTCGTTGTCTTTTTGAAGATCTTTGTTTGGTAGAGATTTAATTTGAAAAAGCGTACAAATGTTGTTTACAATCCATATAGAATTCAAATACCGTTTTAATTAATTCATCCAAATATTTAATTTGAAAAATTAGAAATTCAATCTGAATAGATTCCCAACTGCCCTCGGTATCCGATTTGCTTGCTTTTACAACTCCTTTCCACTGTCCTTTATTTCCTGATTCCAATGCTTTATACAAACTTGACTTTTGAAAGCTCAAAGCAGAGGGCCAAATATAGGATTTATTTATCAATGGTTTTATTTTGGCTTCATAGAAATGGCTGCCTTTTTTACTCTTTTTTAGTTCAACAAATGTTAGTTCGGATATCAAGCCATCGAACTTTGTAATGGTAAATTGATGTCTTTGTCTATTGAACTATGTTCGGTTTGACACCTAAATTGAATTTGAAATAGAACTTTGAATTTCTATGTCTCTTATCAAGAGAAACTTTGATCATCCAACGAAGTTTAGTAGAATTCTTTTAATTTATTCACTAATGGAATCTTACACATAGGAGTTTGATGATAATACAAGAAGTGATATTGCATACTGAGCAATTGGGTTATTTTGTAAACTTAAAATGTTTTAATGAGTTCACGGGTTCGATTGATAGTGGCCATCTACCTAAGATTTAATATCTTACAAATTTTCTTAACACCCAAATGTTGTAGGGTCAGGTGGATTGTTTTGTGAGATTAGTTGAGGTGCGCATAAGCTAGCCCAGACACTCATTGATATAAATATAAAAGAAAAAGTATTTGAGTTCGAGAATTTAAGTTCAAATACTTATTATAATTAATATCAATAATTACTTGTTTGAGTTTTTGTGCGAATTTTCAAGTAAGGAAGTATTAAGAGCACCTATGGAAGATTAAGCATACTATATCCTATCAGTTTAAGACCGAATTATGCTTTAGGTTTTGGAACTCGCTGGAAATGCGGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACACGTCCTTTTGGCTGTGAGAAACGACGAGGAACTTGGGAAGCTTCTTGCCGGGGTGACGATCGCTCATGGTGGGGTGCTTCCAAACATCAACCCAGTCCTTCTTCCAAAGAAATCCGAGAGGGCGGCAGCAGCATCCAAGGAGCCCAAGTCTCCCTCCAAGGGCACCAAGTCCCCAAAGAAGGCCTAGCTTAGCTTCTCATATGCCCTCGCCTACTTAATTCTGTATTTAGATTGGAGTTATCTTCATGTTTAGGACCACTTTATCTGTTTGTGCTTTTATATTTTAGGACATTCCTTTGTGTTCTCACAACTCAGT

mRNA sequence

CTCCGTCGCAGTGGTTTTCTCTTTTTAGTCGGCCGATCGAATTCGATGGCTTTCTTCTCCACCGTAAGGCGCGTTCTCAATGGATCTTCTTCTTCTTCTTCCTCCATTTTACGATCCCAGTGGACTGCCGTTCGTCTCAGCTCAACTCTCACATCCCCAAAGCTCTTCATTAGTGGTCTTTCAAGATTAACAACAGATGAGAAGCTCCAGGAAGCCTTTTCTTCATTTGGCCAGCTTGTAGAAGCAAAGGTTATAACCGACAGGGCGACGGGAAGATCAAAAGGATTCGGCTTTGTAACCTACAGTACGATAGAAGAGGCTGAGAAAGCTAGAGAAGGAATGAATGCCAAGTTTCTGGATGGATGGGTTATTTTTGTTGATCCTGCCAAACCCAGGGAGCCTAGGCCACCTCCACAGCCTCAATCTGAGACCTCTGAATTTGGTATCAGAACAAACAAGACAATTGGGTGATCCCGATTCTTGTCTACAAGCCAATTGAACGAAAAATCTTTGGTTGATCTCCTAAGGCTGAGTCGAGGATGAACACTAATCATGAAACAAGGGTCCAACCTACTAAACTAGTAGGTCGAGTTGAGGCACATGGTCCTCCTCTTTTTATTTTTAGCCAATTTAAAGTACAACATGGCATATGTACCCGTGAAGAAAAGTCTAAATAAAAGGGACTCAACGTCCTACCACAAGCCTTTAAATTTTGAATATATATGTATCATGAATCCATTATACACATTTTTTTTTTTTTTTAATTCAGAGACCAAATAGATATAAATTTCAAAAGTTTATTTGTAACTTGTAGTTTGACAAAAATTTAATTAAGTTAAATTATATATATAAAAAAATGTCTTTGAACTTTTTCACGTGTTTAAAAAATACTCCTATACTTTTAGGAGTTACAATATTACTCCCTTCATTTTTCATAATAACAAAAGTTGTATTTGTTATATAGTTTAGCCGTAAAATTAAAATGAACAAAAAAAACAACGTCGTGTCCATGTCATCACGAATACAGCGTGTGTCATTCACTTTCCATTTTATTTCTCATTTCATAAAAATGTAATCTCCGTTGAAAACCGGTCGTTAACATCCCTCACATTTTCCCTCTTTTTCTGTTTGTTTCCCGAGAAAATTTTCTCTTCCAATGGACTCTGGCGTCAAGGCGAAGAAAGGCGTCGCCGGCAGAAGGGGCGGCGGTCCTAAGAAGAAGCCTGTCTCTCGCTCCGTCAAAGCCGGCCTCCAGTTTCCCGTCGGCAGAATCGGCCGCTACTTGAAGAATGGCCGCTACTCACGACGAGTCGGAACTGGCGCTCCGGTTTACCTTGCTGCTGTTCTTGAGTACCTCGCTGCAGAGGTTTTGGAACTCGCTGGAAATGCGGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACACGTCCTTTTGGCTGTGAGAAACGACGAGGAACTTGGGAAGCTTCTTGCCGGGGTGACGATCGCTCATGGTGGGGTGCTTCCAAACATCAACCCAGTCCTTCTTCCAAAGAAATCCGAGAGGGCGGCAGCAGCATCCAAGGAGCCCAAGTCTCCCTCCAAGGGCACCAAGTCCCCAAAGAAGGCCTAGCTTAGCTTCTCATATGCCCTCGCCTACTTAATTCTGTATTTAGATTGGAGTTATCTTCATGTTTAGGACCACTTTATCTGTTTGTGCTTTTATATTTTAGGACATTCCTTTGTGTTCTCACAACTCAGT

Coding sequence (CDS)

ATGGACTCTGGCGTCAAGGCGAAGAAAGGCGTCGCCGGCAGAAGGGGCGGCGGTCCTAAGAAGAAGCCTGTCTCTCGCTCCGTCAAAGCCGGCCTCCAGTTTCCCGTCGGCAGAATCGGCCGCTACTTGAAGAATGGCCGCTACTCACGACGAGTCGGAACTGGCGCTCCGGTTTACCTTGCTGCTGTTCTTGAGTACCTCGCTGCAGAGGTTTTGGAACTCGCTGGAAATGCGGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACACGTCCTTTTGGCTGTGAGAAACGACGAGGAACTTGGGAAGCTTCTTGCCGGGGTGACGATCGCTCATGGTGGGGTGCTTCCAAACATCAACCCAGTCCTTCTTCCAAAGAAATCCGAGAGGGCGGCAGCAGCATCCAAGGAGCCCAAGTCTCCCTCCAAGGGCACCAAGTCCCCAAAGAAGGCCTAG

Protein sequence

MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAASKEPKSPSKGTKSPKKA
Homology
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BLAST of CcUC04G066540 vs. NCBI nr
Match: XP_022143711.1 (histone H2A [Momordica charantia])

HSP 1 Score: 274.2 bits (700), Expect = 6.6e-70
Identity = 147/152 (96.71%), Postives = 148/152 (97.37%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYL 60
           MDSG KAKKG AGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYL
Sbjct: 1   MDSGGKAKKGAAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           NPVLLPKKSER AAA KEPKSPSKGTKSPKKA
Sbjct: 121 NPVLLPKKSER-AAAGKEPKSPSKGTKSPKKA 151

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BLAST of CcUC04G066540 vs. NCBI nr
Match: XP_008447608.1 (PREDICTED: probable histone H2A.4 [Cucumis melo] >KAA0047349.1 putative histone H2A.4 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-69
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGG-GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG KAKKG AGRRGG GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGAGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           INPVLLPKKSERA  A+KEPKSPSKGTKSPKKA
Sbjct: 121 INPVLLPKKSERAGTAAKEPKSPSKGTKSPKKA 153

[Close]
BLAST of CcUC04G066540 vs. NCBI nr
Match: XP_004142082.1 (probable histone H2A.4 [Cucumis sativus] >KGN54228.1 hypothetical protein Csa_018188 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 3.0e-67
Identity = 146/153 (95.42%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGG-PKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG KAKKG AGRRGG   KKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGADSKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           INPVLLPKKSERAAAA KEPKSPSKGTKSPKKA
Sbjct: 121 INPVLLPKKSERAAAA-KEPKSPSKGTKSPKKA 152

[Close]
BLAST of CcUC04G066540 vs. NCBI nr
Match: XP_038994985.1 (histone H2A-like [Hibiscus syriacus] >KAE8733755.1 Histone H2A [Hibiscus syriacus])

HSP 1 Score: 263.8 bits (673), Expect = 8.9e-67
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYL 60
           MD G K KKG  GR+GGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRYS+RVGTGAPVYL
Sbjct: 1   MDGGAKVKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           NPVLLPKKSE+  AASKEPKSPSK TKSPKKA
Sbjct: 121 NPVLLPKKSEK--AASKEPKSPSKATKSPKKA 150

[Close]
BLAST of CcUC04G066540 vs. NCBI nr
Match: XP_039043508.1 (histone H2A [Hibiscus syriacus] >KAE8664998.1 Histone H2A [Hibiscus syriacus])

HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66
Identity = 139/152 (91.45%), Postives = 144/152 (94.74%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYL 60
           MD+G K KKG  GR+GGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRYS+RVGTGAPVYL
Sbjct: 1   MDTGAKVKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRH+LLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           NPVLLPKKSE+  AASKEPKSPSK TKSPKKA
Sbjct: 121 NPVLLPKKSEK--AASKEPKSPSKSTKSPKKA 150

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BLAST of CcUC04G066540 vs. ExPASy Swiss-Prot
Match: Q9LZ46 (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 4.9e-68
Identity = 136/153 (88.89%), Postives = 143/153 (93.46%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRR-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG K KKG AGRR GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELG LL GVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           INP+LLPKKSE+AA+ +K PKSPSK TKSPKK+
Sbjct: 121 INPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153

[Close]
BLAST of CcUC04G066540 vs. ExPASy Swiss-Prot
Match: Q9M531 (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.4e-67
Identity = 135/153 (88.24%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYL 60
           MD+G K KKG   R+GGGPKKKPVSRSVKAGLQFPVGRIGR+LK GRY++RVG+GAPVYL
Sbjct: 1   MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSER-AAAASKEPKSPSKGTKSPKKA 153
           NPVLLPKK+E+ AAAA+KEPKSP+K TKSPKKA
Sbjct: 121 NPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153

[Close]
BLAST of CcUC04G066540 vs. ExPASy Swiss-Prot
Match: Q2HU65 (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.5e-64
Identity = 129/153 (84.31%), Postives = 139/153 (90.85%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYL 60
           MD+  K KKG  GR+GGGP+KK V+RS++AGLQFPVGRIGRYLK GRY++RVGTGAPVYL
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSERAAAASKEPKSPS-KGTKSPKKA 153
           NPVLLPKK+ER+   SKEPKSP  K  KSPKKA
Sbjct: 121 NPVLLPKKTERSNTVSKEPKSPKPKAGKSPKKA 153

[Close]
BLAST of CcUC04G066540 vs. ExPASy Swiss-Prot
Match: A2WQG7 (Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-62
Identity = 130/152 (85.53%), Postives = 139/152 (91.45%), Query Frame = 0 

Query: 3   SGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAA 62
           +G K KKG AGR+ GGP+KK VSRSVKAGLQFPVGRIGRYLK GRY++R+GTGAPVYLAA
Sbjct: 8   AGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAA 67

Query: 63  VLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINP 122
           VLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINP
Sbjct: 68  VLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINP 127

Query: 123 VLLPKK-SERAAAASKEPKSPSKGT-KSPKKA 153
           VLLPKK +E+AAAA KE KSP K   KSPKKA
Sbjct: 128 VLLPKKTAEKAAAAGKEAKSPKKAAGKSPKKA 159

[Close]
BLAST of CcUC04G066540 vs. ExPASy Swiss-Prot
Match: Q94E96 (Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-62
Identity = 130/152 (85.53%), Postives = 139/152 (91.45%), Query Frame = 0 

Query: 3   SGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAA 62
           +G K KKG AGR+ GGP+KK VSRSVKAGLQFPVGRIGRYLK GRY++R+GTGAPVYLAA
Sbjct: 8   AGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAA 67

Query: 63  VLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINP 122
           VLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINP
Sbjct: 68  VLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINP 127

Query: 123 VLLPKK-SERAAAASKEPKSPSKGT-KSPKKA 153
           VLLPKK +E+AAAA KE KSP K   KSPKKA
Sbjct: 128 VLLPKKTAEKAAAAGKEAKSPKKAAGKSPKKA 159

[Close]
BLAST of CcUC04G066540 vs. ExPASy TrEMBL
Match: A0A6J1CR43 (Histone H2A OS=Momordica charantia OX=3673 GN=LOC111013553 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.2e-70
Identity = 147/152 (96.71%), Postives = 148/152 (97.37%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYL 60
           MDSG KAKKG AGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYL
Sbjct: 1   MDSGGKAKKGAAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           NPVLLPKKSER AAA KEPKSPSKGTKSPKKA
Sbjct: 121 NPVLLPKKSER-AAAGKEPKSPSKGTKSPKKA 151

[Close]
BLAST of CcUC04G066540 vs. ExPASy TrEMBL
Match: A0A5A7U1I6 (Histone H2A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001750 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.2e-70
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGG-GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG KAKKG AGRRGG GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGAGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           INPVLLPKKSERA  A+KEPKSPSKGTKSPKKA
Sbjct: 121 INPVLLPKKSERAGTAAKEPKSPSKGTKSPKKA 153

[Close]
BLAST of CcUC04G066540 vs. ExPASy TrEMBL
Match: A0A1S3BHV2 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103490019 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.2e-70
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGG-GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG KAKKG AGRRGG GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGAGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           INPVLLPKKSERA  A+KEPKSPSKGTKSPKKA
Sbjct: 121 INPVLLPKKSERAGTAAKEPKSPSKGTKSPKKA 153

[Close]
BLAST of CcUC04G066540 vs. ExPASy TrEMBL
Match: A0A0A0KXF2 (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_4G293870 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 146/153 (95.42%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGG-PKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG KAKKG AGRRGG   KKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVY
Sbjct: 1   MDSGGKAKKGFAGRRGGADSKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSQRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           INPVLLPKKSERAAAA KEPKSPSKGTKSPKKA
Sbjct: 121 INPVLLPKKSERAAAA-KEPKSPSKGTKSPKKA 152

[Close]
BLAST of CcUC04G066540 vs. ExPASy TrEMBL
Match: A0A6A3CW06 (Histone H2A OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000991pilonHSYRG00051 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYL 60
           MD G K KKG  GR+GGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRYS+RVGTGAPVYL
Sbjct: 1   MDGGAKVKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           NPVLLPKKSE+  AASKEPKSPSK TKSPKKA
Sbjct: 121 NPVLLPKKSEK--AASKEPKSPSKATKSPKKA 150

[Close]
BLAST of CcUC04G066540 vs. TAIR 10
Match: AT5G02560.1 (histone H2A 12 )

HSP 1 Score: 258.5 bits (659), Expect = 3.5e-69
Identity = 136/153 (88.89%), Postives = 143/153 (93.46%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRR-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG K KKG AGRR GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELG LL GVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           INP+LLPKKSE+AA+ +K PKSPSK TKSPKK+
Sbjct: 121 INPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153

[Close]
BLAST of CcUC04G066540 vs. TAIR 10
Match: AT5G02560.2 (histone H2A 12 )

HSP 1 Score: 245.0 bits (624), Expect = 4.0e-65
Identity = 136/177 (76.84%), Postives = 143/177 (80.79%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRR-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           MDSG K KKG AGRR GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRYS+RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAE------------------------VLELAGNAARDNKKNRIIPRHVLLA 120
           LAAVLEYLAAE                        VLELAGNAARDNKKNRIIPRHVLLA
Sbjct: 61  LAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLA 120

Query: 121 VRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           VRNDEELG LL GVTIAHGGVLPNINP+LLPKKSE+AA+ +K PKSPSK TKSPKK+
Sbjct: 121 VRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 177

[Close]
BLAST of CcUC04G066540 vs. TAIR 10
Match: AT5G59870.1 (histone H2A 6 )

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-52
Identity = 113/153 (73.86%), Postives = 126/153 (82.35%), Query Frame = 0 

Query: 1   MDSGVKAKKGVAGRR-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVY 60
           M+S  K KK   GR+  G PK K VS+S+KAGLQFPVGRI R+LK GRY++R+G GAPVY
Sbjct: 1   MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPN 120
           +AAVLEYLAAEVLELAGNAARDNKK+RIIPRH+LLA+RNDEELGKLL+GVTIAHGGVLPN
Sbjct: 61  MAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSERAAAASKEPKSPSKGTKSPKKA 153
           IN VLLPKKS    A  K  KSP    KSPKKA
Sbjct: 121 INSVLLPKKSATKPAEEKATKSP---VKSPKKA 150

[Close]
BLAST of CcUC04G066540 vs. TAIR 10
Match: AT5G27670.1 (histone H2A 7 )

HSP 1 Score: 194.9 bits (494), Expect = 4.7e-50
Identity = 109/147 (74.15%), Postives = 119/147 (80.95%), Query Frame = 0 

Query: 6   KAKKGVAGRRGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLE 65
           K  +G  GR+ GG +KK VS+SVKAGLQFPVGRI RYLK GRY+ R G+GAPVYLAAVLE
Sbjct: 9   KPTRGAGGRK-GGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLE 68

Query: 66  YLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLL 125
           YLAAEVLELAGNAARDNKKNRI PRH+ LA+RNDEELG+LL GVTIA GGVLPNINPVLL
Sbjct: 69  YLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLL 128

Query: 126 PKKSERAAAASKEPKSPSKGTKSPKKA 153
           PKKS     AS      +  TKSPKKA
Sbjct: 129 PKKS----TASSSQAEKASATKSPKKA 150

[Close]
BLAST of CcUC04G066540 vs. TAIR 10
Match: AT3G20670.1 (histone H2A 13 )

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-44
Identity = 90/123 (73.17%), Postives = 103/123 (83.74%), Query Frame = 0 

Query: 16  GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELA 75
           G G  KK  SRS KAGLQFPVGRI R+LKNG+Y+ RVG GAPVYLAAVLEYLAAEVLELA
Sbjct: 9   GSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELA 68

Query: 76  GNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAA 135
           GNAARDNKK RI+PRH+ LAVRNDEEL KLL  VTIA+GGV+PNI+ +LLPKK+  +  +
Sbjct: 69  GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKPS 128

Query: 136 SKE 139
           + E
Sbjct: 129 ADE 131

The following BLAST results are available for this feature:
BLAST of CcUC04G066540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143711.16.6e-7096.71histone H2A [Momordica charantia][more]
XP_008447608.11.9e-6995.42PREDICTED: probable histone H2A.4 [Cucumis melo] >KAA0047349.1 putative histone ... [more]
XP_004142082.13.0e-6795.42probable histone H2A.4 [Cucumis sativus] >KGN54228.1 hypothetical protein Csa_01... [more]
XP_038994985.18.9e-6792.11histone H2A-like [Hibiscus syriacus] >KAE8733755.1 Histone H2A [Hibiscus syriacu... [more]
XP_039043508.11.5e-6691.45histone H2A [Hibiscus syriacus] >KAE8664998.1 Histone H2A [Hibiscus syriacus][more]
BLAST of CcUC04G066540 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LZ464.9e-6888.89Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1[more]
Q9M5312.4e-6788.24Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1[more]
Q2HU652.5e-6484.31Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 P... [more]
A2WQG71.4e-6285.53Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3... [more]
Q94E961.4e-6285.53Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 ... [more]
BLAST of CcUC04G066540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CR433.2e-7096.71Histone H2A OS=Momordica charantia OX=3673 GN=LOC111013553 PE=3 SV=1[more]
A0A5A7U1I69.2e-7095.42Histone H2A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001750 P... [more]
A0A1S3BHV29.2e-7095.42Histone H2A OS=Cucumis melo OX=3656 GN=LOC103490019 PE=3 SV=1[more]
A0A0A0KXF21.5e-6795.42Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_4G293870 PE=3 SV=1[more]
A0A6A3CW064.3e-6792.11Histone H2A OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000991pilonHSYRG00051 P... [more]
BLAST of CcUC04G066540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02560.13.5e-6988.89histone H2A 12 [more]
AT5G02560.24.0e-6576.84histone H2A 12 [more]
AT5G59870.12.3e-5273.86histone H2A 6 [more]
AT5G27670.14.7e-5074.15histone H2A 7 [more]
AT3G20670.13.0e-4473.17histone H2A 13 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 80..94
score: 73.78
coord: 108..126
score: 75.79
coord: 51..66
score: 86.43
coord: 66..79
score: 89.46
coord: 22..44
score: 69.23
IPR002119Histone H2ASMARTSM00414h2a4coord: 11..131
e-value: 3.4E-77
score: 272.4
IPR002119Histone H2ACDDcd00074H2Acoord: 14..128
e-value: 4.99714E-66
score: 194.861
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 20..97
e-value: 4.6E-12
score: 46.4
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 100..133
e-value: 2.6E-18
score: 65.5
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 10..137
e-value: 7.9E-63
score: 212.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 25..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..152
NoneNo IPR availablePANTHERPTHR23430:SF304HISTONE H2Acoord: 8..146
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 8..146
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 30..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G066540.1CcUC04G066540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031507 heterochromatin assembly
cellular_component GO:0000775 chromosome, centromeric region
cellular_component GO:0000792 heterochromatin
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity