Homology
BLAST of CcUC04G066510 vs. NCBI nr
Match:
XP_038881185.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Benincasa hispida])
HSP 1 Score: 1473.0 bits (3812), Expect = 0.0e+00
Identity = 737/766 (96.21%), Postives = 749/766 (97.78%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASSS-----SSSPNVHHLPP 60
MA TCVKCYPWSLPH+PLSFSSKPISNSSIFFSASVSDQ SSS SSSPNVHHLP
Sbjct: 1 MALTCVKCYPWSLPHSPLSFSSKPISNSSIFFSASVSDQLPSSSSSKFTSSSPNVHHLPL 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLI+ LRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIDALRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIFV+SYAKFELYDEVMGIVKEMEDEYR+KPDTRFYNVLLNVLV+
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYAKFELYDEVMGIVKEMEDEYRMKPDTRFYNVLLNVLVE 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHD+STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGNLDGALRIKEQM EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA
Sbjct: 241 FTTIMQGYIEEGNLDGALRIKEQMAEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAV ILDQMVSRDC+PNAVTYNTIISSLCK NRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVTILDQMVSRDCTPNAVTYNTIISSLCKANRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS NHRNA+ELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSGNHRNAVELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLF+EMLEK DPPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFKEMLEKADPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL+MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKFSESEISTIRGFLKI+KFQDALST GGILDD+YPRRSYRGR
Sbjct: 721 MEKAKFSESEISTIRGFLKIQKFQDALSTLGGILDDLYPRRSYRGR 766
BLAST of CcUC04G066510 vs. NCBI nr
Match:
XP_008447642.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis melo] >KAA0032618.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23499.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1456.8 bits (3770), Expect = 0.0e+00
Identity = 730/766 (95.30%), Postives = 742/766 (96.87%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASSS-----SSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFSSKPISNSSIFFSASVSDQ ASSS SSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIFV+SY KFELYDEVMGIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGG DPDIYTYNSLISG CKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS+NH+NAMELFEEMKGKGCRPDEFTYNMLI SLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEK +PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE+SSF+MLAEGL TL+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKF E EISTIRGFLKIRKFQDALST GGILDDMYPRRSYRGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of CcUC04G066510 vs. NCBI nr
Match:
XP_004142210.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis sativus] >KGN54537.2 hypothetical protein Csa_017913 [Cucumis sativus])
HSP 1 Score: 1448.3 bits (3748), Expect = 0.0e+00
Identity = 723/766 (94.39%), Postives = 742/766 (96.87%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASSSSSSPN-----VHHLPP 60
MAFTCVKCYPWSLPH PLSFSSKPISNSSIFFSAS+SDQ ASSSSS+ VHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSASLSDQLASSSSSNSTSSSHIVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIFV+SY KFELYDEV+GIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
+EGFRPDQFTYNTLVNGLCK+GHA+HAMEVVDAMLLGG DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 SEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYN IISSLCKENRV+EATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS+NH++AM+LFEEMKGKGCRPDEFTYNMLI SLCSSRKLEEALNLLKEMEL+GCA
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY TLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCK 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTP AYNPVIQALFKRNRTHEAMRLFREML+K +PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL+M+DTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKFSE EISTIRGFLKIRKFQDALST GGILDDMYPRRSYRGR
Sbjct: 721 MEKAKFSEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of CcUC04G066510 vs. NCBI nr
Match:
XP_022143855.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Momordica charantia])
HSP 1 Score: 1431.8 bits (3705), Expect = 0.0e+00
Identity = 715/766 (93.34%), Postives = 738/766 (96.34%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASS-----SSSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFSSKPISNSSIFFS SVSDQ ASS +SSSPN+ HLPP
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSTSVSDQLASSYSSNLASSSPNL-HLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQPNFVP+SSVYEEILRKLGKAGSFE MRRVL
Sbjct: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPNFVPNSSVYEEILRKLGKAGSFECMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EE+KLSGC+ DRGIFLIFV+SYAKFELYDEVM IVK ME EYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEIKLSGCDVDRGIFLIFVESYAKFELYDEVMDIVKVMEYEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA
Sbjct: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS NHRNAMELFEEMKGKGC PDEFTYNMLI SLCSSR+LEEALNLLKEME SGCA
Sbjct: 421 QGLCLSGNHRNAMELFEEMKGKGCHPDEFTYNMLIDSLCSSRRLEEALNLLKEMESSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFCK GDI+KAADIVQTMTSSGCNPDIVTYGTLIGGLC+
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKAGDIQKAADIVQTMTSSGCNPDIVTYGTLIGGLCR 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNP+IQALFKRNR HEAMRLFREMLEK DPPDA+T
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPIIQALFKRNRNHEAMRLFREMLEKADPPDAVT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERG IPEFSSF MLAEGLCTLAM+DTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGKIPEFSSFAMLAEGLCTLAMDDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKA FSESEISTIRGFLKIRKFQDALST GILD +YPR+SYRGR
Sbjct: 721 MEKANFSESEISTIRGFLKIRKFQDALSTLEGILDSIYPRKSYRGR 765
BLAST of CcUC04G066510 vs. NCBI nr
Match:
KAG6595306.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1413.3 bits (3657), Expect = 0.0e+00
Identity = 707/766 (92.30%), Postives = 728/766 (95.04%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRAS-----SSSSSPNVHHLPP 60
MAFTCVKCYPWSLPH+PLSF SKPISNSSIFFS SVSDQ AS SSSSSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEV+ALRVFNWASKQ NFVPSSSVYEEILRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRVFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMK+SGCE DRGIFLIFV+SYA FELYDEVM IVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKVSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQ+RPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGF PDQFTYNTLVNGLCKVGH +HAMEVVDAMLL G DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN +ISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLC+S++HRNAM+LFEEMKGKGCRPDEFTYNMLIGSLCSS KL EALNLLKEME SGCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLGEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTM SSGC+PDIVTYGTLIGGLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCK 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EAMRLFREM EK PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIE+GNIPE SSFVMLAEGLCTL MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKF ESEISTIRGFLKIRKF DALST GGILDD+YPR++YRGR
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDLYPRKAYRGR 766
BLAST of CcUC04G066510 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 1058.1 bits (2735), Expect = 4.6e-308
Identity = 514/764 (67.28%), Postives = 643/764 (84.16%), Query Frame = 0
Query: 1 MAF-TCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASSSSSSPNVHHLPPDFTP 60
MAF +C+K YP+S+ S+ ++ + FS +++ ++ S +SP H T
Sbjct: 1 MAFSSCLKFYPFSI--------SQAVTLTHHSFSLNLTPPSSTISFASP--HSAALSSTD 60
Query: 61 KQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMK 120
+L+++LR Q D+ AALR+FN ASK+PNF P ++YEEIL +LG++GSF+ M+++LE+MK
Sbjct: 61 VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 120
Query: 121 LSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDANKL 180
S CE FLI ++SYA+FEL DE++ +V M DE+ +KPDT FYN +LN+LVD N L
Sbjct: 121 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 180
Query: 181 KLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTI 240
KLVE +H+ M I+ DVSTFN+LIKALC+AHQ+RPAILM+E+MPSYGL PDE TFTT+
Sbjct: 181 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 240
Query: 241 MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN-EG 300
MQGYIEEG+LDGALRI+EQMVE+GC ++V+VNV+++GFCK+GR++ AL+FIQE +N +G
Sbjct: 241 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 300
Query: 301 FRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAV 360
F PDQ+T+NTLVNGLCK GH +HA+E++D ML G+DPD+YTYNS+ISGLCKLGE++EAV
Sbjct: 301 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 360
Query: 361 KILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGL 420
++LDQM++RDCSPN VTYNT+IS+LCKEN+VEEATE+AR+LTSKG+LPDVCTFNSLIQGL
Sbjct: 361 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 420
Query: 421 CLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCARNV 480
CL+ NHR AMELFEEM+ KGC PDEFTYNMLI SLCS KL+EALN+LK+MELSGCAR+V
Sbjct: 421 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 480
Query: 481 VIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQ 540
+ YNTLIDG CK + EAEEIFDEME+ GVSR+SVTYNTLIDGLCKS+RVEDAA LMDQ
Sbjct: 481 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 540
Query: 541 MIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGR 600
MIMEG KPDK+TYNSLLTHFC+ GDIKKAADIVQ MTS+GC PDIVTYGTLI GLCKAGR
Sbjct: 541 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 600
Query: 601 VQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGD-PPDAITYK 660
V+VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EA+ LFREMLE+ + PPDA++Y+
Sbjct: 601 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 660
Query: 661 IVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMIME 720
IV+RGLCNGGGPI EAVDF VE++E+G +PEFSS MLAEGL TL+ME+TLVKLV+M+M+
Sbjct: 661 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 720
Query: 721 KAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
KA+FSE E+S ++G LKIRKFQDAL+T GG+LD PRR+YR R
Sbjct: 721 KARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRSR 754
BLAST of CcUC04G066510 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 366.7 bits (940), Expect = 6.4e-100
Identity = 195/638 (30.56%), Postives = 329/638 (51.57%), Query Frame = 0
Query: 58 TPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEE 117
TP QL + L + ++ +F+W Q + S VY+ ++ KLG G F+ + R+L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 118 MKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDAN 177
MK G F +F+ + Y K + ++ EM + Y +P + YNV+L +LV N
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 178 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFT 237
K+ + M+ R+I + TF +++KA C +++ A+ ++ +M +G P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 238 TIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANE 297
T++ + ++ AL++ E+M GC T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 298 GFRPDQFTYNTLVNGLCKVGHARHAMEVV------------------------------- 357
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 358 -DAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCK 417
D + G PD+ TYNSLI G K G + A+++L M ++ C PN +Y ++ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 418 ENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLCLSNNHRNAMELFEEMKGKGCRPDEFT 477
+++EA + +++ G+ P+ FN LI C + A+E+F EM KGC+PD +T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 478 YNMLIGSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGLCKNKRIEEAEEIFDEME 537
+N LI LC +++ AL LL++M G N V YNTLI+ + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 538 LQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHFCKTGDIK 597
QG D +TYN+LI GLC++ V+ A L ++M+ +G P + N L+ C++G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 598 KAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRVQVASRLLRSIQMKGMVLTPQAYNPVI 657
+A + + M G PDIVT+ +LI GLC+AGR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 658 QALFKRNRTHEAMRLFREMLEKGDPPDAITYKIVYRGL 664
L K ++A L E +E G P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of CcUC04G066510 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 351.7 bits (901), Expect = 2.1e-95
Identity = 216/699 (30.90%), Postives = 335/699 (47.93%), Query Frame = 0
Query: 55 PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 114
P PK + ++ Q D + AL +FN K+ F + S Y ++ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 115 LEEMKLS-GCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 174
L +M+ + G G+++ + +Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 175 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 234
VD+ + M R I DV +F I +K+ CK + A+ ++ M S G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 235 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 294
+ T++ G+ EE + +M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 295 AANEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGE 354
G P+ FTYN + GLC+ G A+ +V ++ G PD+ TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 355 IEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNS 414
+EA L +MV+ P++ TYNT+I+ CK V+ A I G +PD T+ S
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 415 LIQGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSG 474
LI GLC A+ LF E GKG +P+ YN LI L + + EA L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 475 CARNVVIYNTLIDGLCK-----------------------------------NKRIEEAE 534
V +N L++GLCK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 535 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHF 594
EI D M GV D TYN+L++GLCK+ + ED M+ +G P+ FT+N LL
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 595 CKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRVQVASRLLRSIQ--MKGMVL 654
C+ + +A +++ M + NPD VT+GTLI G CK G + A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 655 TPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAITYKIVYRGLCNGGGPIGEAVDF 714
TP YN +I A ++ A +LF+EM+++ PD TY+++ G C G + F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN-VNLGYKF 662
Query: 715 TVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 716
+EM+E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of CcUC04G066510 vs. ExPASy Swiss-Prot
Match:
Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 6.6e-89
Identity = 185/648 (28.55%), Postives = 330/648 (50.93%), Query Frame = 0
Query: 54 PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 113
P +PK +++ L+ + + AA +F+ A++ P + S+ VY ILR+L + ++ R
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 114 VLEEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 173
++E ++ C+ D + L + +Y K + D+ + + K M + + +P R YN LLN
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 174 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 233
V+A + VES + + ++ T+N+LIK CK + A ++ M G PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 234 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 293
+++T++ + G LD AL + ++M E G N+LI+GF K+ A+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 294 AANE-GFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLG 353
+ P+ T+N +++GL K G +++ + M + D+YTY+SLI GLC G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 354 EIEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFN 413
+++A + +++ R S + VTYNT++ C+ +++E+ E+ R++ K + ++ ++N
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYN 364
Query: 414 SLIQGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELS 473
LI+GL + A ++ M KG D+ TY + I LC + + +AL +++E+E S
Sbjct: 365 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 424
Query: 474 GCARNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 533
G +V Y ++ID LCK KR+EEA + EM GV +S N LI GL + R+ +A
Sbjct: 425 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 484
Query: 534 AHLMDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGG 593
+ + +M G +P +YN L+ CK G +A+ V+ M +G PD+ TY L+ G
Sbjct: 485 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 544
Query: 594 LCKAGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPD 653
LC+ ++ +A L G+ +N +I L + +AM + M + +
Sbjct: 545 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 604
Query: 654 AITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 701
+TY + G G A M + G P+ S+ + +GLC
Sbjct: 605 LVTYNTLMEGFFKVGDS-NRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
BLAST of CcUC04G066510 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 4.3e-88
Identity = 200/710 (28.17%), Postives = 336/710 (47.32%), Query Frame = 0
Query: 50 VHHLPPDFTPKQLIE-TLRRQTDEVAALRVFNWASKQPNF-VPSSSVYEEILRKL----- 109
+HHL +FTP+ L+ Q D+ L+ NWA+ F + + IL K
Sbjct: 39 LHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKT 98
Query: 110 ---------GKAGSFEYMRRVLEEMK--LSGCEFDRGIFLIFVDSYAKFELYDEVMGIVK 169
K EY V + ++ C +F + V SY++ L D+ + IV
Sbjct: 99 AQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIV- 158
Query: 170 EMEDEYRIKPDTRFYNVLLNVLVDANK-LKLVESAHSSMVRRRIRHDVSTFNILIKALCK 229
+ + P YN +L+ + + + + E+ M+ ++ +V T+NILI+ C
Sbjct: 159 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 218
Query: 230 AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVT 289
A + A+ + ++M + G P+ T+ T++ GY + +D ++ M G ++
Sbjct: 219 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 278
Query: 290 VNVLINGFCKQGRIDQALSFIQEAANEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAML 349
NV+ING C++GR+ + + E G+ D+ TYNTL+ G CK G+ A+ + ML
Sbjct: 279 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 338
Query: 350 LGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVE 409
G P + TY SLI +CK G + A++ LDQM R PN TY T++ ++ +
Sbjct: 339 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 398
Query: 410 EATEIARLLTSKGVLPDVCTFNSLIQGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLI 469
EA + R + G P V T+N+LI G C++ +A+ + E+MK KG PD
Sbjct: 399 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD-------- 458
Query: 470 GSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVS 529
VV Y+T++ G C++ ++EA + EM +G+
Sbjct: 459 ---------------------------VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 518
Query: 530 RDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADI 589
D++TY++LI G C+ +R ++A L ++M+ GL PD+FTY +L+ +C GD++KA +
Sbjct: 519 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 578
Query: 590 VQTMTSSGCNPDIVTYGTLIGGLCKAGRVQVASRLLRSIQMKGMVLTPQAYNPVIQ---- 649
M G PD+VTY LI GL K R + A RLL + + V + Y+ +I+
Sbjct: 579 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 638
Query: 650 -------ALFK----RNRTHEAMRLFREMLEKGDPPDAITYKIVYRGLCNGGGPIGEAVD 709
+L K + EA ++F ML K PD Y I+ G C G I +A
Sbjct: 639 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR-AGDIRKAYT 698
Query: 710 FTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMIMEKAKFSESE 726
EM++ G + + + L + L + L ++ ++ + SE+E
Sbjct: 699 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711
BLAST of CcUC04G066510 vs. ExPASy TrEMBL
Match:
A0A5A7SQ06 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00010 PE=4 SV=1)
HSP 1 Score: 1456.8 bits (3770), Expect = 0.0e+00
Identity = 730/766 (95.30%), Postives = 742/766 (96.87%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASSS-----SSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFSSKPISNSSIFFSASVSDQ ASSS SSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIFV+SY KFELYDEVMGIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGG DPDIYTYNSLISG CKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS+NH+NAMELFEEMKGKGCRPDEFTYNMLI SLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEK +PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE+SSF+MLAEGL TL+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKF E EISTIRGFLKIRKFQDALST GGILDDMYPRRSYRGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of CcUC04G066510 vs. ExPASy TrEMBL
Match:
A0A1S3BHC3 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490047 PE=4 SV=1)
HSP 1 Score: 1456.8 bits (3770), Expect = 0.0e+00
Identity = 730/766 (95.30%), Postives = 742/766 (96.87%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASSS-----SSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFSSKPISNSSIFFSASVSDQ ASSS SSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIFV+SY KFELYDEVMGIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGG DPDIYTYNSLISG CKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS+NH+NAMELFEEMKGKGCRPDEFTYNMLI SLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEK +PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE+SSF+MLAEGL TL+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKF E EISTIRGFLKIRKFQDALST GGILDDMYPRRSYRGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of CcUC04G066510 vs. ExPASy TrEMBL
Match:
A0A6J1CPZ4 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013667 PE=4 SV=1)
HSP 1 Score: 1431.8 bits (3705), Expect = 0.0e+00
Identity = 715/766 (93.34%), Postives = 738/766 (96.34%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASS-----SSSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFSSKPISNSSIFFS SVSDQ ASS +SSSPN+ HLPP
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSTSVSDQLASSYSSNLASSSPNL-HLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQPNFVP+SSVYEEILRKLGKAGSFE MRRVL
Sbjct: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPNFVPNSSVYEEILRKLGKAGSFECMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EE+KLSGC+ DRGIFLIFV+SYAKFELYDEVM IVK ME EYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEIKLSGCDVDRGIFLIFVESYAKFELYDEVMDIVKVMEYEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA
Sbjct: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS NHRNAMELFEEMKGKGC PDEFTYNMLI SLCSSR+LEEALNLLKEME SGCA
Sbjct: 421 QGLCLSGNHRNAMELFEEMKGKGCHPDEFTYNMLIDSLCSSRRLEEALNLLKEMESSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFCK GDI+KAADIVQTMTSSGCNPDIVTYGTLIGGLC+
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKAGDIQKAADIVQTMTSSGCNPDIVTYGTLIGGLCR 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNP+IQALFKRNR HEAMRLFREMLEK DPPDA+T
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPIIQALFKRNRNHEAMRLFREMLEKADPPDAVT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERG IPEFSSF MLAEGLCTLAM+DTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGKIPEFSSFAMLAEGLCTLAMDDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKA FSESEISTIRGFLKIRKFQDALST GILD +YPR+SYRGR
Sbjct: 721 MEKANFSESEISTIRGFLKIRKFQDALSTLEGILDSIYPRKSYRGR 765
BLAST of CcUC04G066510 vs. ExPASy TrEMBL
Match:
A0A6J1I5N1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471244 PE=4 SV=1)
HSP 1 Score: 1412.9 bits (3656), Expect = 0.0e+00
Identity = 706/766 (92.17%), Postives = 728/766 (95.04%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRAS-----SSSSSPNVHHLPP 60
MAFTCVKCYPWSLPH+PLSF SKPISNSSIFFS SVSDQ AS SSSSSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEV+ALR+FNWASKQ NFVPSSSVYEEILRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRIFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIFV+SYA FELYDEVM IVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQ+RPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGF PDQFTYNTLVNGLCKVGH +HAMEVVDAMLL G DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN +ISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLC+S++HRNAM+LFEEMKGKGCRPDEFTYNMLIGSLCSS KL EALNLLKEME SGCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLVEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTM SSGC+PDIVTYGTLIGGLC+
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCR 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EAMRLFREM EK PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIE+GNIPE SSFVMLAEGLCTL MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKF ESEISTIRGFLKIRKF DALST GGILDD+YPR++YRGR
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDLYPRKTYRGR 766
BLAST of CcUC04G066510 vs. ExPASy TrEMBL
Match:
A0A6J1HFU3 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463562 PE=4 SV=1)
HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 706/766 (92.17%), Postives = 727/766 (94.91%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRAS-----SSSSSPNVHHLPP 60
MAFTCVKCYPWSLPH+PLSF SKPISNSSIFFS SVSDQ AS SSSSSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEV+ALR+FNWASKQ NFVPSSSVYEEILRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRIFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIFV+SYA FELYDEVM IVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQ+RPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGF PDQFTYNTLVNGLCKVGH +HAMEVVDAMLL G DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN +ISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
QGLC+S++HRNAM+LFEEMKGKGCRPDEFTYNMLIGSLCSS KL EALNLLKEME SGCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLGEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDG CKNKR EEAEEIFDEMELQGVSRDSVTYN LIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRTEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTM SSGC+PDIVTYGTLIGGLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCK 600
Query: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAIT 660
AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EAMRLFREM EK PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIE+GNIPE SSFVMLAEGLCTL MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
MEKAKF ESEISTIRGFLKIRKF DALST GGILDD+YPR++YRGR
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDLYPRKAYRGR 766
BLAST of CcUC04G066510 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 1058.1 bits (2735), Expect = 3.3e-309
Identity = 514/764 (67.28%), Postives = 643/764 (84.16%), Query Frame = 0
Query: 1 MAF-TCVKCYPWSLPHTPLSFSSKPISNSSIFFSASVSDQRASSSSSSPNVHHLPPDFTP 60
MAF +C+K YP+S+ S+ ++ + FS +++ ++ S +SP H T
Sbjct: 1 MAFSSCLKFYPFSI--------SQAVTLTHHSFSLNLTPPSSTISFASP--HSAALSSTD 60
Query: 61 KQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMK 120
+L+++LR Q D+ AALR+FN ASK+PNF P ++YEEIL +LG++GSF+ M+++LE+MK
Sbjct: 61 VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 120
Query: 121 LSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDANKL 180
S CE FLI ++SYA+FEL DE++ +V M DE+ +KPDT FYN +LN+LVD N L
Sbjct: 121 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 180
Query: 181 KLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTI 240
KLVE +H+ M I+ DVSTFN+LIKALC+AHQ+RPAILM+E+MPSYGL PDE TFTT+
Sbjct: 181 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 240
Query: 241 MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN-EG 300
MQGYIEEG+LDGALRI+EQMVE+GC ++V+VNV+++GFCK+GR++ AL+FIQE +N +G
Sbjct: 241 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 300
Query: 301 FRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAV 360
F PDQ+T+NTLVNGLCK GH +HA+E++D ML G+DPD+YTYNS+ISGLCKLGE++EAV
Sbjct: 301 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 360
Query: 361 KILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGL 420
++LDQM++RDCSPN VTYNT+IS+LCKEN+VEEATE+AR+LTSKG+LPDVCTFNSLIQGL
Sbjct: 361 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 420
Query: 421 CLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCARNV 480
CL+ NHR AMELFEEM+ KGC PDEFTYNMLI SLCS KL+EALN+LK+MELSGCAR+V
Sbjct: 421 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 480
Query: 481 VIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQ 540
+ YNTLIDG CK + EAEEIFDEME+ GVSR+SVTYNTLIDGLCKS+RVEDAA LMDQ
Sbjct: 481 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 540
Query: 541 MIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGR 600
MIMEG KPDK+TYNSLLTHFC+ GDIKKAADIVQ MTS+GC PDIVTYGTLI GLCKAGR
Sbjct: 541 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 600
Query: 601 VQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGD-PPDAITYK 660
V+VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EA+ LFREMLE+ + PPDA++Y+
Sbjct: 601 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 660
Query: 661 IVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMIME 720
IV+RGLCNGGGPI EAVDF VE++E+G +PEFSS MLAEGL TL+ME+TLVKLV+M+M+
Sbjct: 661 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 720
Query: 721 KAKFSESEISTIRGFLKIRKFQDALSTFGGILDDMYPRRSYRGR 762
KA+FSE E+S ++G LKIRKFQDAL+T GG+LD PRR+YR R
Sbjct: 721 KARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRSR 754
BLAST of CcUC04G066510 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 366.7 bits (940), Expect = 4.5e-101
Identity = 195/638 (30.56%), Postives = 329/638 (51.57%), Query Frame = 0
Query: 58 TPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEE 117
TP QL + L + ++ +F+W Q + S VY+ ++ KLG G F+ + R+L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 118 MKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDAN 177
MK G F +F+ + Y K + ++ EM + Y +P + YNV+L +LV N
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 178 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFT 237
K+ + M+ R+I + TF +++KA C +++ A+ ++ +M +G P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 238 TIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANE 297
T++ + ++ AL++ E+M GC T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 298 GFRPDQFTYNTLVNGLCKVGHARHAMEVV------------------------------- 357
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 358 -DAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCK 417
D + G PD+ TYNSLI G K G + A+++L M ++ C PN +Y ++ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 418 ENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLCLSNNHRNAMELFEEMKGKGCRPDEFT 477
+++EA + +++ G+ P+ FN LI C + A+E+F EM KGC+PD +T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 478 YNMLIGSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGLCKNKRIEEAEEIFDEME 537
+N LI LC +++ AL LL++M G N V YNTLI+ + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 538 LQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHFCKTGDIK 597
QG D +TYN+LI GLC++ V+ A L ++M+ +G P + N L+ C++G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 598 KAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRVQVASRLLRSIQMKGMVLTPQAYNPVI 657
+A + + M G PDIVT+ +LI GLC+AGR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 658 QALFKRNRTHEAMRLFREMLEKGDPPDAITYKIVYRGL 664
L K ++A L E +E G P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of CcUC04G066510 vs. TAIR 10
Match:
AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 351.7 bits (901), Expect = 1.5e-96
Identity = 216/699 (30.90%), Postives = 335/699 (47.93%), Query Frame = 0
Query: 55 PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 114
P PK + ++ Q D + AL +FN K+ F + S Y ++ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 115 LEEMKLS-GCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 174
L +M+ + G G+++ + +Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 175 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 234
VD+ + M R I DV +F I +K+ CK + A+ ++ M S G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 235 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 294
+ T++ G+ EE + +M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 295 AANEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGE 354
G P+ FTYN + GLC+ G A+ +V ++ G PD+ TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 355 IEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNS 414
+EA L +MV+ P++ TYNT+I+ CK V+ A I G +PD T+ S
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 415 LIQGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSG 474
LI GLC A+ LF E GKG +P+ YN LI L + + EA L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 475 CARNVVIYNTLIDGLCK-----------------------------------NKRIEEAE 534
V +N L++GLCK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 535 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHF 594
EI D M GV D TYN+L++GLCK+ + ED M+ +G P+ FT+N LL
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 595 CKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRVQVASRLLRSIQ--MKGMVL 654
C+ + +A +++ M + NPD VT+GTLI G CK G + A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 655 TPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPDAITYKIVYRGLCNGGGPIGEAVDF 714
TP YN +I A ++ A +LF+EM+++ PD TY+++ G C G + F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN-VNLGYKF 662
Query: 715 TVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMI 716
+EM+E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of CcUC04G066510 vs. TAIR 10
Match:
AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 330.1 bits (845), Expect = 4.7e-90
Identity = 185/648 (28.55%), Postives = 330/648 (50.93%), Query Frame = 0
Query: 54 PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 113
P +PK +++ L+ + + AA +F+ A++ P + S+ VY ILR+L + ++ R
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 114 VLEEMKLSGCEFDRGIFLIFVDSYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 173
++E ++ C+ D + L + +Y K + D+ + + K M + + +P R YN LLN
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 174 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 233
V+A + VES + + ++ T+N+LIK CK + A ++ M G PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 234 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 293
+++T++ + G LD AL + ++M E G N+LI+GF K+ A+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 294 AANE-GFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLG 353
+ P+ T+N +++GL K G +++ + M + D+YTY+SLI GLC G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 354 EIEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFN 413
+++A + +++ R S + VTYNT++ C+ +++E+ E+ R++ K + ++ ++N
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYN 364
Query: 414 SLIQGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELS 473
LI+GL + A ++ M KG D+ TY + I LC + + +AL +++E+E S
Sbjct: 365 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 424
Query: 474 GCARNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 533
G +V Y ++ID LCK KR+EEA + EM GV +S N LI GL + R+ +A
Sbjct: 425 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 484
Query: 534 AHLMDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGG 593
+ + +M G +P +YN L+ CK G +A+ V+ M +G PD+ TY L+ G
Sbjct: 485 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 544
Query: 594 LCKAGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKGDPPD 653
LC+ ++ +A L G+ +N +I L + +AM + M + +
Sbjct: 545 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 604
Query: 654 AITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 701
+TY + G G A M + G P+ S+ + +GLC
Sbjct: 605 LVTYNTLMEGFFKVGDS-NRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
BLAST of CcUC04G066510 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 327.4 bits (838), Expect = 3.0e-89
Identity = 200/710 (28.17%), Postives = 336/710 (47.32%), Query Frame = 0
Query: 50 VHHLPPDFTPKQLIE-TLRRQTDEVAALRVFNWASKQPNF-VPSSSVYEEILRKL----- 109
+HHL +FTP+ L+ Q D+ L+ NWA+ F + + IL K
Sbjct: 39 LHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKT 98
Query: 110 ---------GKAGSFEYMRRVLEEMK--LSGCEFDRGIFLIFVDSYAKFELYDEVMGIVK 169
K EY V + ++ C +F + V SY++ L D+ + IV
Sbjct: 99 AQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIV- 158
Query: 170 EMEDEYRIKPDTRFYNVLLNVLVDANK-LKLVESAHSSMVRRRIRHDVSTFNILIKALCK 229
+ + P YN +L+ + + + + E+ M+ ++ +V T+NILI+ C
Sbjct: 159 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 218
Query: 230 AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVT 289
A + A+ + ++M + G P+ T+ T++ GY + +D ++ M G ++
Sbjct: 219 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 278
Query: 290 VNVLINGFCKQGRIDQALSFIQEAANEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAML 349
NV+ING C++GR+ + + E G+ D+ TYNTL+ G CK G+ A+ + ML
Sbjct: 279 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 338
Query: 350 LGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVE 409
G P + TY SLI +CK G + A++ LDQM R PN TY T++ ++ +
Sbjct: 339 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 398
Query: 410 EATEIARLLTSKGVLPDVCTFNSLIQGLCLSNNHRNAMELFEEMKGKGCRPDEFTYNMLI 469
EA + R + G P V T+N+LI G C++ +A+ + E+MK KG PD
Sbjct: 399 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD-------- 458
Query: 470 GSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGLCKNKRIEEAEEIFDEMELQGVS 529
VV Y+T++ G C++ ++EA + EM +G+
Sbjct: 459 ---------------------------VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 518
Query: 530 RDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADI 589
D++TY++LI G C+ +R ++A L ++M+ GL PD+FTY +L+ +C GD++KA +
Sbjct: 519 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 578
Query: 590 VQTMTSSGCNPDIVTYGTLIGGLCKAGRVQVASRLLRSIQMKGMVLTPQAYNPVIQ---- 649
M G PD+VTY LI GL K R + A RLL + + V + Y+ +I+
Sbjct: 579 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 638
Query: 650 -------ALFK----RNRTHEAMRLFREMLEKGDPPDAITYKIVYRGLCNGGGPIGEAVD 709
+L K + EA ++F ML K PD Y I+ G C G I +A
Sbjct: 639 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR-AGDIRKAYT 698
Query: 710 FTVEMIERGNIPEFSSFVMLAEGLCTLAMEDTLVKLVDMIMEKAKFSESE 726
EM++ G + + + L + L + L ++ ++ + SE+E
Sbjct: 699 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038881185.1 | 0.0e+00 | 96.21 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Benincasa ... | [more] |
XP_008447642.1 | 0.0e+00 | 95.30 | PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic ... | [more] |
XP_004142210.1 | 0.0e+00 | 94.39 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis sa... | [more] |
XP_022143855.1 | 0.0e+00 | 93.34 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Momordica ... | [more] |
KAG6595306.1 | 0.0e+00 | 92.30 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFF1 | 4.6e-308 | 67.28 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 6.4e-100 | 30.56 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9CA58 | 2.1e-95 | 30.90 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
Q9SS81 | 6.6e-89 | 28.55 | Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 4.3e-88 | 28.17 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SQ06 | 0.0e+00 | 95.30 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BHC3 | 0.0e+00 | 95.30 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis ... | [more] |
A0A6J1CPZ4 | 0.0e+00 | 93.34 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Momordic... | [more] |
A0A6J1I5N1 | 0.0e+00 | 92.17 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbit... | [more] |
A0A6J1HFU3 | 0.0e+00 | 92.17 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT3G53700.1 | 3.3e-309 | 67.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 4.5e-101 | 30.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74580.1 | 1.5e-96 | 30.90 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G09060.1 | 4.7e-90 | 28.55 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 3.0e-89 | 28.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |