CcUC04G066160 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G066160
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Location	CicolChr04: 23124678 .. 23126613 (+)
RNA-Seq Expression	CcUC04G066160
Synteny	CcUC04G066160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGAATCCAGCCTCTCTTTCCCAACCCTTTCACTTTCTTTTATTTATCAACACGATCGAAGCAAATGGTCTGCTTGGCTTCCTGCCCTTTCCATCTTTCTTTCTTCAACATCGACAATGGATCAAAACAACCAAAACCATCATCATTCATCTCACTGTGACACTGACAGGTACGTCTCTCTATCTCTATCTTTTGGTTGCCATGGCTGACTGTGAACAATCTGTGATGTAAAACATACAGAAGGGAAACACAGATCTTGAATCTTTCCTCTCAATGGCTTCTGCCTTTATGTGCAGTTTGTTGATGGCCTCTTTAATGGGTTGGGTTCTGCGTTTGTTTGTTGCAAGTTCTAGTTTGAAGGTTGTGTTTCCCAAGATTATAACCAATTTTGATTTGGTTTTCTGCATTTTGGTTGTGTCTTAAGGGGGAATTTCGTTTGTAGAAATTACACTTTAATTCTTTTAGGGGGAAATTTGGCTTCCAATGGCTAGTCTAACTTATGATTGTTCATTTTATCTTGAAATGAATACTTTCTTTGTTTTATGATTTGGATTTTGGCCATACTGGTTTTGTACTGGCTTGGCTGATATTCATGGATTTCTGTGCTTTTTCTTTCCTTTTTGGGTTAGGATTCGACATTTTGATCTGGTTTTCATTCTCTCTCTGTTTTTTTTCTTTTTTTAGCCATCTTTAGATATTTAAAATCTTTAATGACTGAATATGGGGGGGGATTTATAATATATATAGTTTTTTGTTTCTTTAAAAACCCTAGTCAAATTATGAAAGAACATACGACAAAATCATTTCCAAATGATTCCTTCCATTTTCAAGATGTGAAAAAAAAAAAAAAACACTAAAATTCTAAGTGGCACTCATTTGTGCAGTCCATTCAAATCACCCAGCAAAAAGTACATGAGAAATTTATAAAAAGAAAAATAAAATTTATCAGATTAAAATTAGACAATTGAATGTGCACAAGATAGGTGAAGCCTAAAATACACTTAACTATTTCAGATTTTCTGGCTTCCAACCATGGAATACAGAAGGCTTTGATGTGAAGAAGAAAAGAAGACTGCTAATTGAGCAACTAAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGATCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACCTCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAAAAATAGCAATAGAAGGTAAGGAGATGTCCAAAGGGCAGGTTCAAATGCAGGGTGAGAAAGACAAGTTGCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGAACATAGCTGTATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCTCCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGACCCAGGTACTGAAATTCTCATTTCATCTTTGCATAAAATATAAAGATTTAAATGAAATGAGTGGCAAAATTCAATGATGGAAGTAAGATTTAGACCAGAGACCAAAACAATTTTAAAATGTCATTAGGGATAATAGTATTTTGTTTCTTTCACTATTAGGTGTTTTGTGTTCTCAAAGCAAAAACTTGTGATGTTGGGTGAGTTTTATGTGTTTTCCATACACAAACTAAATCTGAATCATTCAAATATGCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGATGTTTACATCTTCAATCCGTTCTGTATCTACTTTCAAGGAATTTGAAAGTGTATGGTGCGTTTAGAGATGAAAGTATTTCACCAAGTGTGCGACAATTCAATCCAAGTGATGATGTCTGTGAATGAGATTCTACCGAACCGTTTTACGCAATT

mRNA sequence

CTCGAATCCAGCCTCTCTTTCCCAACCCTTTCACTTTCTTTTATTTATCAACACGATCGAAGCAAATGGTCTGCTTGGCTTCCTGCCCTTTCCATCTTTCTTTCTTCAACATCGACAATGGATCAAAACAACCAAAACCATCATCATTCATCTCACTGTGACACTGACAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGATCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACCTCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAAAAATAGCAATAGAAGGTAAGGAGATGTCCAAAGGGCAGGTTCAAATGCAGGGTGAGAAAGACAAGTTGCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGAACATAGCTGTATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCTCCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGACCCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGATGTTTACATCTTCAATCCGTTCTGTATCTACTTTCAAGGAATTTGAAAGTGTATGGTGCGTTTAGAGATGAAAGTATTTCACCAAGTGTGCGACAATTCAATCCAAGTGATGATGTCTGTGAATGAGATTCTACCGAACCGTTTTACGCAATT

Coding sequence (CDS)

CTCGAATCCAGCCTCTCTTTCCCAACCCTTTCACTTTCTTTTATTTATCAACACGATCGAAGCAAATGGTCTGCTTGGCTTCCTGCCCTTTCCATCTTTCTTTCTTCAACATCGACAATGGATCAAAACAACCAAAACCATCATCATTCATCTCACTGTGACACTGACAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGATCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACCTCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAAAAATAGCAATAGAAGGTAAGGAGATGTCCAAAGGGCAGGTTCAAATGCAGGGTGAGAAAGACAAGTTGCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGAACATAGCTGTATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCTCCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGACCCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGA

Protein sequence

LESSLSFPTLSLSFIYQHDRSKWSAWLPALSIFLSSTSTMDQNNQNHHHSSHCDTDSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGEKDKLQWSYGPEEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP

Homology

[Close]

BLAST of CcUC04G066160 vs. NCBI nr
Match: XP_038883311.1 (protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 6.7e-62
Identity = 135/194 (69.59%), Postives = 141/194 (72.68%), Query Frame = 0


Query: 40  MDQNNQNHHHSSHCDTD-----------------------------SLPTPKLPCLGLRS 99
           M+Q NQ HHH SHCDTD                             SLPT KLPC G  S
Sbjct: 1   MEQKNQ-HHHPSHCDTDSSCSFTVFQPWNTEGLDVKKKRRLLIDQLSLPTSKLPCWGPSS 60

Query: 100 VSFPHGGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGEKDKLQWSYGPEED 159
           +S PHG  N KF+KK QE EEGEEST T+IAIEGKE SK QVQMQGEKDKLQ SYG EED
Sbjct: 61  ISIPHGADNFKFDKKLQEEEEGEESTPTEIAIEGKETSKEQVQMQGEKDKLQRSYGHEED 120

Query: 160 LLEFGSQEHSCIYEQCCSDTAQS-LLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQE 204
           LLEFGS  H+CIYEQCCSD+AQS LLLPT SKHDFVLSSGRWS DPEAESKTIKPTIDQE
Sbjct: 121 LLEFGSHGHNCIYEQCCSDSAQSLLLLPTNSKHDFVLSSGRWSVDPEAESKTIKPTIDQE 180

[Close]

BLAST of CcUC04G066160 vs. NCBI nr
Match: XP_008448098.1 (PREDICTED: uncharacterized protein LOC103490381 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 5.5e-56
Identity = 127/205 (61.95%), Postives = 138/205 (67.32%), Query Frame = 0


Query: 40  MDQNNQNHHHSSHCDTD-----------------------------------------SL 99
           MDQNNQ HHH S  DTD                                         SL
Sbjct: 1   MDQNNQ-HHHPSQFDTDRIINSPTSLDFETSSRFHGFQSWNTEAIDVKKKRRLLIDQLSL 60

Query: 100 PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGEK 159
           PT KLPC G RS+S PHG  N KFNKKP   +EGE STLTKI I+GKEMS+ QV+MQGEK
Sbjct: 61  PTSKLPCWGSRSISIPHGEDNFKFNKKP---KEGEGSTLTKITIKGKEMSEEQVRMQGEK 120

Query: 160 DKLQWSYGPEEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAE 204
           DKLQ SYG EEDLLEFG+  HSCIYE+CCS +AQSLLLPT+SK +FVLSSGRWS D E E
Sbjct: 121 DKLQKSYGHEEDLLEFGTLGHSCIYEECCSGSAQSLLLPTDSKQNFVLSSGRWSVDSETE 180

[Close]

BLAST of CcUC04G066160 vs. NCBI nr
Match: XP_011653642.1 (uncharacterized protein LOC105435241 [Cucumis sativus] >KGN54264.1 hypothetical protein Csa_018110 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 6.3e-52
Identity = 126/217 (58.06%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 40  MDQNNQNHHHSSHCDTD-----------------------------------------SL 99
           MDQNN+ HHH SH DTD                                         SL
Sbjct: 1   MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSL 60

Query: 100 PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE-----------EGEESTLTKIAIE-GKE 159
           PT KLP  G RS+S PHG  N KFN +PQE E           EGEESTLTKIAI+  KE
Sbjct: 61  PTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGEGEESTLTKIAIDKSKE 120

Query: 160 MSKGQVQMQGEKDKLQWSYGPEEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVL 204
           MS+ QV+MQG KDKLQ SYG EEDLLEFGS+E+ CIYE+CCS +AQ+LLLPT+SK +FVL
Sbjct: 121 MSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVL 180

[Close]

BLAST of CcUC04G066160 vs. NCBI nr
Match: KAG6603645.1 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.8 bits (530), Expect = 4.5e-50
Identity = 125/209 (59.81%), Postives = 143/209 (68.42%), Query Frame = 0


Query: 27  LPALSIFLSSTSTMDQNNQNHHHSSH-----------CDTD---------------SLPT 86
           LP +SI LSS  TMDQ N   HH SH            DT+               SLPT
Sbjct: 49  LPPISISLSS-PTMDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPT 108

Query: 87  PKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGE- 146
           PKLPC G    S+SFP+G  + KFNKK +  EEG ES+LTK+A EGK+MS  +V++QGE 
Sbjct: 109 PKLPCWGPSSSSISFPYGEDSFKFNKK-RPKEEG-ESSLTKMATEGKDMSTEEVRIQGEK 168

Query: 147 ---KDKLQWSYGPEEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSAD 204
              KDKL  +YG EEDLLEFGS  +S IYEQCCSD+ Q+LLLPT+SKHDFVLSSGRWS D
Sbjct: 169 DGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSID 228

[Close]

BLAST of CcUC04G066160 vs. NCBI nr
Match: KAG7033829.1 (hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 117/196 (59.69%), Postives = 134/196 (68.37%), Query Frame = 0


Query: 40  MDQNNQNHHHSSH-----------CDTD---------------SLPTPKLPCLG--LRSV 99
           MDQ N   HH SH            DT+               SLPTPKLPC G    S+
Sbjct: 1   MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 100 SFPHGGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGE----KDKLQWSYGP 159
           SFP+G  + KFNKK +  EEG ES+LTK+A EGK+MS  +V++QGE    KDKL  +YG 
Sbjct: 61  SFPYGEDSLKFNKK-RPKEEG-ESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGH 120

Query: 160 EEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTID 204
           EEDLLEFGS  +S IYEQCCSD+ Q+LLLPT+SKHDFVLSSGRWS DPEAESK I PTID
Sbjct: 121 EEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTID 180

[Close]

BLAST of CcUC04G066160 vs. ExPASy Swiss-Prot
Match: A8MR65 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FHL PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.2e-06
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 128 EEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTI 187
           +ED  +F   E      +   +  Q +L P ES   ++LSS RWS ++ +++  T KPTI
Sbjct: 132 QEDTQDFTHMEFIYHDSEFAVEDLQEVLNPVES---YILSSARWSVSNQDSKEATTKPTI 191

Query: 188 DQEFEQYFSVLL 199
           DQEFEQYFS L+
Sbjct: 192 DQEFEQYFSTLM 200

[Close]

BLAST of CcUC04G066160 vs. ExPASy Swiss-Prot
Match: Q8S4Q6 (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 41/112 (36.61%), Postives = 52/112 (46.43%), Query Frame = 0


Query: 102 IEGKEMSK---GQVQMQGEKDKLQWSYGPE----------EDLLEFGSQEHSCIYEQCCS 161
           IE KE S    G+ +M   +  L + YG +          E++L    QE      + CS
Sbjct: 100 IEMKEESSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEEEEDAKGCS 159

Query: 162 DTAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL 199
             A            FVLSSGRW+   D     +T KPTIDQEFEQYFS L+
Sbjct: 160 SNAAK----------FVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

[Close]

BLAST of CcUC04G066160 vs. ExPASy TrEMBL
Match: A0A1S3BJU4 (uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.7e-56
Identity = 127/205 (61.95%), Postives = 138/205 (67.32%), Query Frame = 0


Query: 40  MDQNNQNHHHSSHCDTD-----------------------------------------SL 99
           MDQNNQ HHH S  DTD                                         SL
Sbjct: 1   MDQNNQ-HHHPSQFDTDRIINSPTSLDFETSSRFHGFQSWNTEAIDVKKKRRLLIDQLSL 60

Query: 100 PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGEK 159
           PT KLPC G RS+S PHG  N KFNKKP   +EGE STLTKI I+GKEMS+ QV+MQGEK
Sbjct: 61  PTSKLPCWGSRSISIPHGEDNFKFNKKP---KEGEGSTLTKITIKGKEMSEEQVRMQGEK 120

Query: 160 DKLQWSYGPEEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAE 204
           DKLQ SYG EEDLLEFG+  HSCIYE+CCS +AQSLLLPT+SK +FVLSSGRWS D E E
Sbjct: 121 DKLQKSYGHEEDLLEFGTLGHSCIYEECCSGSAQSLLLPTDSKQNFVLSSGRWSVDSETE 180

[Close]

BLAST of CcUC04G066160 vs. ExPASy TrEMBL
Match: A0A0A0KZL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 3.1e-52
Identity = 126/217 (58.06%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 40  MDQNNQNHHHSSHCDTD-----------------------------------------SL 99
           MDQNN+ HHH SH DTD                                         SL
Sbjct: 1   MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSL 60

Query: 100 PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE-----------EGEESTLTKIAIE-GKE 159
           PT KLP  G RS+S PHG  N KFN +PQE E           EGEESTLTKIAI+  KE
Sbjct: 61  PTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGEGEESTLTKIAIDKSKE 120

Query: 160 MSKGQVQMQGEKDKLQWSYGPEEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVL 204
           MS+ QV+MQG KDKLQ SYG EEDLLEFGS+E+ CIYE+CCS +AQ+LLLPT+SK +FVL
Sbjct: 121 MSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVL 180

[Close]

BLAST of CcUC04G066160 vs. ExPASy TrEMBL
Match: A0A6J1GGJ6 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN=LOC111453741 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 9.5e-46
Identity = 114/197 (57.87%), Postives = 131/197 (66.50%), Query Frame = 0


Query: 40  MDQNNQNHHHSSH-----------CDTD---------------SLPTPKLPCLG--LRSV 99
           MDQ N   HH SH            DT+               SLPTPKLPC G    S+
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 100 SFPHGGGNSKFNKK-PQEGEEGEESTLTKIAIEGKEMSKGQVQMQGE----KDKLQWSYG 159
           SFP+G  + KFNKK P+EG    ES+LTK+A EGK+MS  +V++QGE    KDKL  +YG
Sbjct: 61  SFPYGEDSFKFNKKRPKEG----ESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYG 120

Query: 160 PEEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTI 204
            EEDLLEFGS  +S IYE  CSD+ Q+LLLPT+S HDFVLSSGRWS DPEAESK I PTI
Sbjct: 121 HEEDLLEFGSHGNSSIYEHYCSDSTQNLLLPTDSNHDFVLSSGRWSIDPEAESKIITPTI 180

[Close]

BLAST of CcUC04G066160 vs. ExPASy TrEMBL
Match: A0A6J1IMA5 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=LOC111478324 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 110/197 (55.84%), Postives = 127/197 (64.47%), Query Frame = 0


Query: 40  MDQNNQNHHHSSH-----------CDTD---------------SLPTPKLPCLG--LRSV 99
           MDQ N   HH SH            DT+               SLPTPKLPC G    S+
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 100 SFPHGGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGE----KDKLQWSYGP 159
           SFP+G  + KFNKK +  EEG ES+LTK+A      S  +V++QGE    KDKL  +YG 
Sbjct: 61  SFPYGEDSFKFNKK-RPKEEG-ESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGH 120

Query: 160 EEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHD-FVLSSGRWSADPEAESKTIKPTI 204
           EEDLLEFGS  +S IYEQCCSD+ Q+LLLPT+S HD FVLSSGRWS DPEAESK + P I
Sbjct: 121 EEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAI 180

[Close]

BLAST of CcUC04G066160 vs. ExPASy TrEMBL
Match: A0A6J1CPJ7 (uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013556 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.4e-27
Identity = 90/185 (48.65%), Postives = 101/185 (54.59%), Query Frame = 0


Query: 45  QNHHHSSHCDTD----------------------------SLPTPKLPCLG-LRSVSFPH 104
           Q  HH SH  TD                            S PTPKLP  G   SVSFP+
Sbjct: 3   QESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPY 62

Query: 105 GGGNSKFNKKPQEGEEGEESTLTKIAIEGKEMSKGQVQMQGEKDKLQWSYGPEEDLLEFG 164
            GGN KFN+ PQ+  E EE  LTK A+E KE+SK +  M+     L  SYG  EDLLEFG
Sbjct: 63  -GGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALME---SGLHISYGHGEDLLEFG 122

Query: 165 SQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADP--EAESKTIKPTIDQEFEQY 199
           S +  C                 +SKHDFVLSSGRW+ DP  EAESKT+KPTIDQEFEQY
Sbjct: 123 STDEECY---------------RDSKHDFVLSSGRWNVDPPSEAESKTLKPTIDQEFEQY 168

[Close]

BLAST of CcUC04G066160 vs. TAIR 10
Match: AT5G02200.1 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 128 EEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTI 187
           +ED  +F   E      +   +  Q +L P ES   ++LSS RWS ++ +++  T KPTI
Sbjct: 112 QEDTQDFTHMEFIYHDSEFAVEDLQEVLNPVES---YILSSARWSVSNQDSKEATTKPTI 171

Query: 188 DQEFEQYFSVLL 199
           DQEFEQYFS L+
Sbjct: 172 DQEFEQYFSTLM 180

[Close]

BLAST of CcUC04G066160 vs. TAIR 10
Match: AT5G02200.2 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 128 EEDLLEFGSQEHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTI 187
           +ED  +F   E      +   +  Q +L P ES   ++LSS RWS ++ +++  T KPTI
Sbjct: 132 QEDTQDFTHMEFIYHDSEFAVEDLQEVLNPVES---YILSSARWSVSNQDSKEATTKPTI 191

Query: 188 DQEFEQYFSVLL 199
           DQEFEQYFS L+
Sbjct: 192 DQEFEQYFSTLM 200

[Close]

BLAST of CcUC04G066160 vs. TAIR 10
Match: AT2G37678.1 (far-red elongated hypocotyl 1 )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 41/112 (36.61%), Postives = 52/112 (46.43%), Query Frame = 0


Query: 102 IEGKEMSK---GQVQMQGEKDKLQWSYGPE----------EDLLEFGSQEHSCIYEQCCS 161
           IE KE S    G+ +M   +  L + YG +          E++L    QE      + CS
Sbjct: 100 IEMKEESSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEEEEDAKGCS 159

Query: 162 DTAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL 199
             A            FVLSSGRW+   D     +T KPTIDQEFEQYFS L+
Sbjct: 160 SNAAK----------FVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

The following BLAST results are available for this feature:

BLAST of CcUC04G066160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883311.1	6.7e-62	69.59	protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]	[more]
XP_008448098.1	5.5e-56	61.95	PREDICTED: uncharacterized protein LOC103490381 [Cucumis melo]	[more]
XP_011653642.1	6.3e-52	58.06	uncharacterized protein LOC105435241 [Cucumis sativus] >KGN54264.1 hypothetical ...	[more]
KAG6603645.1	4.5e-50	59.81	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrospe...	[more]
KAG7033829.1	1.2e-47	59.69	hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CcUC04G066160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MR65	4.2e-06	41.67	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FH...	[more]
Q8S4Q6	1.7e-04	36.61	Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE...	[more]

BLAST of CcUC04G066160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJU4	2.7e-56	61.95	uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=...	[more]
A0A0A0KZL8	3.1e-52	58.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1	[more]
A0A6J1GGJ6	9.5e-46	57.87	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IMA5	1.6e-40	55.84	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CPJ7	3.4e-27	48.65	uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of CcUC04G066160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02200.1	3.0e-07	41.67	far-red-elongated hypocotyl1-like	[more]
AT5G02200.2	3.0e-07	41.67	far-red-elongated hypocotyl1-like	[more]
AT2G37678.1	1.2e-05	36.61	far-red elongated hypocotyl 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..95
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 106..198
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 106..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G066160.1	CcUC04G066160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0016740	transferase activity