CcUC04G065790 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G065790
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr04: 22803327 .. 22803812 (-)
RNA-Seq Expression	CcUC04G065790
Synteny	CcUC04G065790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGATCCAAAAACCCTATTTATTTCCAATCACCTAAACTCTGTAAATCGCACCTCCAAAAATATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCTTCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACACTGCGGCGGTTGTTTTTTTGAGTCCGTCTGAAGCGCCACGAAGCGAAATGAAAATTCAGGGGACCTCGGCGGCAGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCATAAATCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACACAAAGCAGAATTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG

mRNA sequence

ATGTCGGATCCAAAAACCCTATTTATTTCCAATCACCTAAACTCTGTAAATCGCACCTCCAAAAATATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCTTCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACACTGCGGCGGTTGTTTTTTTGAGTCCGTCTGAAGCGCCACGAAGCGAAATGAAAATTCAGGGGACCTCGGCGGCAGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCATAAATCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACACAAAGCAGAATTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG

Coding sequence (CDS)

ATGTCGGATCCAAAAACCCTATTTATTTCCAATCACCTAAACTCTGTAAATCGCACCTCCAAAAATATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCTTCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACACTGCGGCGGTTGTTTTTTTGAGTCCGTCTGAAGCGCCACGAAGCGAAATGAAAATTCAGGGGACCTCGGCGGCAGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCATAAATCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACACAAAGCAGAATTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG

Protein sequence

MSDPKTLFISNHLNSVNRTSKNMPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMKIQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRHKAELNSAFETTCRPRC

Homology

[Close]

BLAST of CcUC04G065790 vs. NCBI nr
Match: KAG6603622.1 (hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033809.1 hypothetical protein SDJN02_03534, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.2 bits (526), Expect = 1.0e-49
Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MSDPKTLFISNHLNSVNRTSKNMPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKL 60
           MSDP+ LFIS+  NSVNRTSK M PFLFLLFIF NALL SV+VGAAPPPT+AE PSGRKL
Sbjct: 1   MSDPEALFISDLPNSVNRTSKIMAPFLFLLFIFANALLGSVAVGAAPPPTAAEPPSGRKL 60

Query: 61  GKHHTAAVVFLSPSEAPRSEMKIQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGG 120
           GKHH+ AVVF SPSEAPRSE K+      + A+ GG+GNEI+LE NHEHHKS DKS+AGG
Sbjct: 61  GKHHSTAVVFSSPSEAPRSEKKV------STANDGGTGNEIELE-NHEHHKSIDKSVAGG 120

Query: 121 GVILGGFATTFLVAIICYIRATRR 145
           GVILGG ATTFLVAI+CYIRATRR
Sbjct: 121 GVILGGLATTFLVAIVCYIRATRR 137

[Close]

BLAST of CcUC04G065790 vs. NCBI nr
Match: XP_008448528.1 (PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo] >KAA0045126.1 uncharacterized protein E6C27_scaffold30G001250 [Cucumis melo var. makuwa] >TYK23611.1 uncharacterized protein E5676_scaffold500G001230 [Cucumis melo var. makuwa])

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMK 82
           +PPFLFLLFIF NA  +S++  AAPPPTSAESPS RKLGKH + A+ F SP EAPRSEMK
Sbjct: 4   VPPFLFLLFIFANAFFSSLAAAAAPPPTSAESPSLRKLGKHQSTAIAFSSPIEAPRSEMK 63

Query: 83  IQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRAT 142
           +QGTS   AASGG SGN +QL  NH+HHKSRDKSIAGGGVILGG ATTFLVAIICYIRAT
Sbjct: 64  VQGTS---AASGGESGNAVQL-GNHDHHKSRDKSIAGGGVILGGLATTFLVAIICYIRAT 123

Query: 143 RRHKAELNS 152
           RR K+EL S
Sbjct: 124 RRQKSELGS 128

[Close]

BLAST of CcUC04G065790 vs. NCBI nr
Match: KGN54308.1 (hypothetical protein Csa_017945 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 9.5e-43
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMK 82
           +PPFLFLLFIF NAL +S++  AAPPPTSAESPS RKLGKH + A+ F SP+EAPRS MK
Sbjct: 2   LPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMK 61

Query: 83  IQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRAT 142
           +QGTS    ASGG SGN ++L  NH+HHKSRDKSIAGGGVILGG ATTFLVA+ICYIRAT
Sbjct: 62  VQGTS---GASGGESGNAVEL-GNHDHHKSRDKSIAGGGVILGGLATTFLVAVICYIRAT 121

Query: 143 RRHKAELNS 152
           RR K+EL S
Sbjct: 122 RRQKSELGS 126

[Close]

BLAST of CcUC04G065790 vs. NCBI nr
Match: XP_022151558.1 (uncharacterized protein LOC111019472 [Momordica charantia])

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-30
Identity = 86/136 (63.24%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSV-----GAAPPP--TSAESPSGRKLGKHHTAAVVF--LSP 82
           M  FLF+LFIF NA LNSV V     GAAP P  T AE+PS RKLGKH +AA V    SP
Sbjct: 1   MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSP 60

Query: 83  SEAPRSEMKIQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLV 142
           SEAPRSEMK+Q TSAAA   G         ++ H +HK+ DKSIAGGGVILGG ATTFLV
Sbjct: 61  SEAPRSEMKVQATSAAATNGG---------DHQHHNHKASDKSIAGGGVILGGLATTFLV 120

Query: 143 AIICYIRATRRHKAEL 150
           AIICYIRATRR  +E+
Sbjct: 121 AIICYIRATRRSNSEV 127

[Close]

BLAST of CcUC04G065790 vs. NCBI nr
Match: KAG6595353.1 (hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027361.1 hypothetical protein SDJN02_11373, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-24
Identity = 71/127 (55.91%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMK 82
           M PFLFLLFIF +ALL+S +V A P       PS RKLG H +AA V  SPSEAP+SE+K
Sbjct: 1   MAPFLFLLFIFASALLDSAAVAAEP-------PSARKLGNHWSAAAVSSSPSEAPQSEIK 60

Query: 83  IQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRAT 142
           +                      N EHHKSRD SIAGGGVILGG ATTF VAIICYIRAT
Sbjct: 61  VL--------------------ENREHHKSRDMSIAGGGVILGGLATTFFVAIICYIRAT 100

Query: 143 RRHKAEL 150
           +R  +E+
Sbjct: 121 KRQNSEV 100

[Close]

BLAST of CcUC04G065790 vs. ExPASy TrEMBL
Match: A0A5A7TSM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001230 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.2e-44
Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMK 82
           +PPFLFLLFIF NA  +S++  AAPPPTSAESPS RKLGKH + A+ F SP EAPRSEMK
Sbjct: 4   VPPFLFLLFIFANAFFSSLAAAAAPPPTSAESPSLRKLGKHQSTAIAFSSPIEAPRSEMK 63

Query: 83  IQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRAT 142
           +QGTS   AASGG SGN +QL  NH+HHKSRDKSIAGGGVILGG ATTFLVAIICYIRAT
Sbjct: 64  VQGTS---AASGGESGNAVQL-GNHDHHKSRDKSIAGGGVILGGLATTFLVAIICYIRAT 123

Query: 143 RRHKAELNS 152
           RR K+EL S
Sbjct: 124 RRQKSELGS 128

[Close]

BLAST of CcUC04G065790 vs. ExPASy TrEMBL
Match: A0A1S3BJV8 (uncharacterized protein LOC103490675 OS=Cucumis melo OX=3656 GN=LOC103490675 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.2e-44
Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMK 82
           +PPFLFLLFIF NA  +S++  AAPPPTSAESPS RKLGKH + A+ F SP EAPRSEMK
Sbjct: 4   VPPFLFLLFIFANAFFSSLAAAAAPPPTSAESPSLRKLGKHQSTAIAFSSPIEAPRSEMK 63

Query: 83  IQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRAT 142
           +QGTS   AASGG SGN +QL  NH+HHKSRDKSIAGGGVILGG ATTFLVAIICYIRAT
Sbjct: 64  VQGTS---AASGGESGNAVQL-GNHDHHKSRDKSIAGGGVILGGLATTFLVAIICYIRAT 123

Query: 143 RRHKAELNS 152
           RR K+EL S
Sbjct: 124 RRQKSELGS 128

[Close]

BLAST of CcUC04G065790 vs. ExPASy TrEMBL
Match: A0A0A0KXQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303070 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.6e-43
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMK 82
           +PPFLFLLFIF NAL +S++  AAPPPTSAESPS RKLGKH + A+ F SP+EAPRS MK
Sbjct: 2   LPPFLFLLFIFANALFSSLAAAAAPPPTSAESPSVRKLGKHQSTAIAFSSPTEAPRSVMK 61

Query: 83  IQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRAT 142
           +QGTS    ASGG SGN ++L  NH+HHKSRDKSIAGGGVILGG ATTFLVA+ICYIRAT
Sbjct: 62  VQGTS---GASGGESGNAVEL-GNHDHHKSRDKSIAGGGVILGGLATTFLVAVICYIRAT 121

Query: 143 RRHKAELNS 152
           RR K+EL S
Sbjct: 122 RRQKSELGS 126

[Close]

BLAST of CcUC04G065790 vs. ExPASy TrEMBL
Match: A0A6J1DCH7 (uncharacterized protein LOC111019472 OS=Momordica charantia OX=3673 GN=LOC111019472 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 86/136 (63.24%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 23  MPPFLFLLFIFVNALLNSVSV-----GAAPPP--TSAESPSGRKLGKHHTAAVVF--LSP 82
           M  FLF+LFIF NA LNSV V     GAAP P  T AE+PS RKLGKH +AA V    SP
Sbjct: 1   MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSP 60

Query: 83  SEAPRSEMKIQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLV 142
           SEAPRSEMK+Q TSAAA   G         ++ H +HK+ DKSIAGGGVILGG ATTFLV
Sbjct: 61  SEAPRSEMKVQATSAAATNGG---------DHQHHNHKASDKSIAGGGVILGGLATTFLV 120

Query: 143 AIICYIRATRRHKAEL 150
           AIICYIRATRR  +E+
Sbjct: 121 AIICYIRATRRSNSEV 127

[Close]

BLAST of CcUC04G065790 vs. ExPASy TrEMBL
Match: A0A061ERA0 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021829 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 9.6e-17
Identity = 60/125 (48.00%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 49  PTSAESPSGRKLGKHHTAAVVFL------SPSEAPRSEMKIQ--------GTSAAAAASG 108
           PT+AE+P+ RKLGKH    V         SPS+AP+ E  +         G +AA     
Sbjct: 48  PTTAEAPTVRKLGKHQPKVVKTFGSAPASSPSQAPQPEKDMHRIGESPSTGQTAATVERN 107

Query: 109 GGSGNEIQLENNH--EHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRHKAELN-S 157
            G    ++ +  H  +HH+S DKS+AGGGVILGG ATTFLVA+ICYIRAT RHK+E + S
Sbjct: 108 NGENVSVEGQTIHLQKHHRSVDKSVAGGGVILGGLATTFLVAVICYIRATGRHKSETHQS 167

[Close]

BLAST of CcUC04G065790 vs. TAIR 10
Match: AT3G09280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 42/101 (41.58%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 46  APPPTSAESPSGRKLGKHHTAAVVFLSPSEAPRSEMKIQGTSAAAAASGGGSGNEIQLEN 105
           A   + AE P+ RKLG+H          +EAP                   S  E  +  
Sbjct: 19  AAASSEAEPPATRKLGRHEWPG----EEAEAPEV-----------------SHLEETVRR 78

Query: 106 NHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRHK 147
            H HH + ++S+AGGGVILGG ATTFLV + CYIRATR+HK
Sbjct: 79  GH-HHSTVERSVAGGGVILGGLATTFLVVVFCYIRATRKHK 97

The following BLAST results are available for this feature:

BLAST of CcUC04G065790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603622.1	1.0e-49	76.39	hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008448528.1	1.9e-43	75.97	PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo] >KAA0045126.1 unc...	[more]
KGN54308.1	9.5e-43	73.64	hypothetical protein Csa_017945 [Cucumis sativus]	[more]
XP_022151558.1	2.4e-30	63.24	uncharacterized protein LOC111019472 [Momordica charantia]	[more]
KAG6595353.1	2.6e-24	55.91	hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC04G065790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC04G065790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSM2	9.2e-44	75.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BJV8	9.2e-44	75.97	uncharacterized protein LOC103490675 OS=Cucumis melo OX=3656 GN=LOC103490675 PE=...	[more]
A0A0A0KXQ0	4.6e-43	73.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303070 PE=4 SV=1	[more]
A0A6J1DCH7	1.2e-30	63.24	uncharacterized protein LOC111019472 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A061ERA0	9.6e-17	48.00	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021829 PE=4 SV=1	[more]

BLAST of CcUC04G065790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09280.1	3.5e-11	41.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..114
None	No IPR available	PANTHER	PTHR34558:SF9	F3L24.15 PROTEIN	coord: 23..152
None	No IPR available	PANTHER	PTHR34558	EXPRESSED PROTEIN	coord: 23..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G065790.1	CcUC04G065790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane