CcUC04G065490 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G065490
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription termination/antitermination protein NusG
Location	CicolChr04: 22504182 .. 22507162 (-)
RNA-Seq Expression	CcUC04G065490
Synteny	CcUC04G065490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCTTCTTCATCAACCAAACGACAAATGGGAGTTGCAATAACGACCACCCATCGGCGTTTATCGTCACCGGTGACTCCACAGCCGAGCCAGTAATCAGAAAATGGCCTGTGGGCTTCTGACTTGGAGCCCAATTTCTCTTCGCTCAACTTCTTTCCCTGCTCTTTCCTTCCCTCTCTCTTCTTCCAAACGTATCCAATTATCAATCTCCGCCGCCGTCGAAATCCCCTCCGCCTCCGACGAAGTTCAGCAGCTGTCGGCCCGGGAGAGGAGGAAGCTGAGGAATGAGAGGAGAGAGACTAAAACCACTACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAAGAAGCCCAAGAAGGAATTTGCCACTTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTGGCTCGTGTTAGAGGCCAAGAAATTGTTGAACGCCTCGCTCGTTCTCTTGCTAGGAACTACCCCGACCTAGATTTCAAGGTAAAATTTCTTCATCCCACTCTTTGATTTCTAGGTTTGTTGCACAATTTGATTTCATGTGTTGTATTGATTTGGCACCAATTTTCTTAAAGCAAATCGAATGGATTCTGTTGTCTTAGTTTTGAAATTCATTAACAGAACTCTAAATATGAAAACCTACTGAGTTCCATTGTTTGGGAGCGCAAGGGAATGATTAAATGTTTCTGTTACCATATACATTTCATTAGCTTGATTACCTTACAGTGTAGTGCTTAGATTGCAGGAAAAAGGATTTAAAACAACAGTAATAGATAAAAAGAATGAGGTTTTTTCTTTTCAATTCTATATTAGATATCAAAGAAACAACGGCTATCTAAAAAAGAGTGAAGAAATGGGATTCGTGTTGTTAGTTGCCACAAATTGTTAGAGACGATAATGTGTAGCAACATCTCAAGTTCTTCAATTGGATTGCAGATATATTACCCGTCTGTTCAGGAGAAGAGGAAACTAAAGAATGGTACTTACACCGTTAAACCGAAAGCTGTTTTTCCTGGGTCTGTATTTATTAGGTGTATCATGAACAAGGAGATACATGACTTCATTAGAGAGTGTGATGGTGTTGGAGGCTTTGTTGGTGCGAAGGTTGGAAACACGTGAGTCGTTATTTCGTTCCTTCTTTGTAGAAAAAAGTTAAGCAATTGTTTGTTTTGTTTGAAACTCTGGACAGGGAATGAGAGAACTGCATTGGCCCTTTGGGATTATGCAATTTGTATGTCTTGTAGTCAATAGATTTTGGAATCTAGGAGGTTGTGCCATAGAACTGATTCTAAACTAAATCTGAATTTTAAAACTTTGGATTCAAAATTCAGATTTTCAAAGTCCTATAGACGATGGCTTTCATCCAAAAAGTTAGATGTAAATAGCTTTATATTTCTTTACATCAATTCTGTGTTCTCAGTCAGTCTGTTGTTCTGATAGTTTGGGCAATATACAGTAAACGACAGATAAATAAACCAAAGCCGGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAGGCAAAGGAAGAGCAAGTAAGACATGACCAGGCTTTCCTAGAGAAAAGGCAAGAGCAAGCTTCAAACTCTAGCGCACTCGAGACTGACTTAGATATAAATGGTACTACTGCTATAAAGCACAAAGGAAGACCGAAAAAAGCTGTTAATACTTTGTCTCCAGGGTCAACTGTTCGGGTGGCGTCTGGGACTTTTGCTGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTGTGCTGTTTTCTTTTAGATGAAAATTTGGGTACAAAGGAGAAAAATAAGAAGAAAGCTGTGTGCTAGAGACCTGACGCATTGTTAGAAAGCATTTGAATTTTATTTTATCTACTAACCATAATTGATTTCCTTCATGCAGGTAACTGTGGGATTCACACTATTTGGGAAGGAAACCCTCGTAGACCTTGACATTGGTGATATTATTGTAGATACAAAATGAGTGAATGTACTTTCTCAGCCACGGTAAGTTTTTTAAATCACGAGATACCATTTATTTGAGGTTTCTTTCTTCTACTTTAATGTAAAGTTTAGTGCCTTCGTATAATCAGTCAAAGCCCACATAAATTCATAATCATCATAAGAACTTGCAGGGATCTTGTTTGGTCCTTCAGATCATTATTTAACTCACTGTTAACAGTCTTCAATAATAAGCCTTCATTTGTAATATTGAAAATTAAAATAGCCTACAATGGCTAATGAAGCTCTCCAAATCACAATAGATTCAGATTTAGTAATCATGTCTGCAAGATTTTGGGGTTGTTTTAAGATAGAAGCGAAAGACACCATGGCTTTGTTACTTCATCATTCTTCGGTTTGAAGCCAAATGTGGTGGGAAATGTTTAAGGACTGCCACTATTAAATTAGAGCGTTTCGAAATAGTTGTTTCTGTTTCTTTAGTTAACACCAATCGGAGCGTCTTTGATAGCTGAACACTCTTCACTCTTCTCTGTGATTGTTTTGCAGTGAAGTGTGGATGAAGCTCATGGATTTGGAGGATAAGCAAGCAGCTCCAGCTCTCAGCTCTCAACTCATAAGCACGTTCACGAACCAATGAACACAAAAGTACTTTTGCTTGAATTGCCAAACAGCTTACTTTGATGAACATGTCCACAAATCAGCTGTGCTTTTTTGAAATTACTCTGCATTTGGAGATTCTTATTGGAAATCAACCAAGGTCTTGAAGGAACTGGCAGAAGCCGAAATGTATTATTGTTAGACTATTCAGAAACCAAAGTAGGGAATATCATGATGAACCATAGATAGCAATTGTAAATTCAAATGTTTCTGAAGTCAAAAATTTGAATCATGATTGTCTTAATTCAGGAAAATATTCTATAAACTAGCTATGTTCTAAAGTATTTCCAAAATTGTGTTACCATTAAAATCGTAGTAGTTTTTGAGCTC

mRNA sequence

TATCTTCTTCATCAACCAAACGACAAATGGGAGTTGCAATAACGACCACCCATCGGCGTTTATCGTCACCGGTGACTCCACAGCCGAGCCAGTAATCAGAAAATGGCCTGTGGGCTTCTGACTTGGAGCCCAATTTCTCTTCGCTCAACTTCTTTCCCTGCTCTTTCCTTCCCTCTCTCTTCTTCCAAACGTATCCAATTATCAATCTCCGCCGCCGTCGAAATCCCCTCCGCCTCCGACGAAGTTCAGCAGCTGTCGGCCCGGGAGAGGAGGAAGCTGAGGAATGAGAGGAGAGAGACTAAAACCACTACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAAGAAGCCCAAGAAGGAATTTGCCACTTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTGGCTCGTGTTAGAGGCCAAGAAATTGTTGAACGCCTCGCTCGTTCTCTTGCTAGGAACTACCCCGACCTAGATTTCAAGATATATTACCCGTCTGTTCAGGAGAAGAGGAAACTAAAGAATGGTACTTACACCGTTAAACCGAAAGCTGTTTTTCCTGGGTCTGTATTTATTAGGTGTATCATGAACAAGGAGATACATGACTTCATTAGAGAGTGTGATGGTGTTGGAGGCTTTGTTGGTGCGAAGGTTGGAAACACTCAGTCTGTTGTTCTGATAGTTTGGGCAATATACAGTAAACGACAGATAAATAAACCAAAGCCGGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAGGCAAAGGAAGAGCAAGTAAGACATGACCAGGCTTTCCTAGAGAAAAGGCAAGAGCAAGCTTCAAACTCTAGCGCACTCGAGACTGACTTAGATATAAATGGTACTACTGCTATAAAGCACAAAGGAAGACCGAAAAAAGCTGTTAATACTTTGTCTCCAGGGTCAACTGTTCGGGTGGCGTCTGGGACTTTTGCTGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTCACACTATTTGGGAAGGAAACCCTCGTAGACCTTGACATTGGTGATATTATTGTAGATACAAAATGAGTGAATGTACTTTCTCAGCCACGTGAAGTGTGGATGAAGCTCATGGATTTGGAGGATAAGCAAGCAGCTCCAGCTCTCAGCTCTCAACTCATAAGCACGTTCACGAACCAATGAACACAAAAGTACTTTTGCTTGAATTGCCAAACAGCTTACTTTGATGAACATGTCCACAAATCAGCTGTGCTTTTTTGAAATTACTCTGCATTTGGAGATTCTTATTGGAAATCAACCAAGGTCTTGAAGGAACTGGCAGAAGCCGAAATGTATTATTGTTAGACTATTCAGAAACCAAAGTAGGGAATATCATGATGAACCATAGATAGCAATTGTAAATTCAAATGTTTCTGAAGTCAAAAATTTGAATCATGATTGTCTTAATTCAGGAAAATATTCTATAAACTAGCTATGTTCTAAAGTATTTCCAAAATTGTGTTACCATTAAAATCGTAGTAGTTTTTGAGCTC

Coding sequence (CDS)

ATGGCCTGTGGGCTTCTGACTTGGAGCCCAATTTCTCTTCGCTCAACTTCTTTCCCTGCTCTTTCCTTCCCTCTCTCTTCTTCCAAACGTATCCAATTATCAATCTCCGCCGCCGTCGAAATCCCCTCCGCCTCCGACGAAGTTCAGCAGCTGTCGGCCCGGGAGAGGAGGAAGCTGAGGAATGAGAGGAGAGAGACTAAAACCACTACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAAGAAGCCCAAGAAGGAATTTGCCACTTGGACTGAGAAGCTCAACCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTGGCTCGTGTTAGAGGCCAAGAAATTGTTGAACGCCTCGCTCGTTCTCTTGCTAGGAACTACCCCGACCTAGATTTCAAGATATATTACCCGTCTGTTCAGGAGAAGAGGAAACTAAAGAATGGTACTTACACCGTTAAACCGAAAGCTGTTTTTCCTGGGTCTGTATTTATTAGGTGTATCATGAACAAGGAGATACATGACTTCATTAGAGAGTGTGATGGTGTTGGAGGCTTTGTTGGTGCGAAGGTTGGAAACACTCAGTCTGTTGTTCTGATAGTTTGGGCAATATACAGTAAACGACAGATAAATAAACCAAAGCCGGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAGGCAAAGGAAGAGCAAGTAAGACATGACCAGGCTTTCCTAGAGAAAAGGCAAGAGCAAGCTTCAAACTCTAGCGCACTCGAGACTGACTTAGATATAAATGGTACTACTGCTATAAAGCACAAAGGAAGACCGAAAAAAGCTGTTAATACTTTGTCTCCAGGGTCAACTGTTCGGGTGGCGTCTGGGACTTTTGCTGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTCACACTATTTGGGAAGGAAACCCTCGTAGACCTTGACATTGGTGATATTATTGTAGATACAAAATGA

Protein sequence

MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLRNERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHDQAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK

Homology

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BLAST of CcUC04G065490 vs. NCBI nr
Match: XP_038880828.1 (transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida])

HSP 1 Score: 580.9 bits (1496), Expect = 7.3e-162
Identity = 303/337 (89.91%), Postives = 311/337 (92.28%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLR 60
           MACGLL WSPISLRS SFPALSF LSS KR QLSISA VE PSA+D++QQLSARERRKLR
Sbjct: 1   MACGLLIWSPISLRSISFPALSFSLSSPKRTQLSISATVETPSAADDIQQLSARERRKLR 60

Query: 61  NERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120
           NERRE KTTTNWREEVEERLCKKPKKEFATWTEKLNLDYL+KLGPQWWVMRVARVRGQEI
Sbjct: 61  NERREIKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLSKLGPQWWVMRVARVRGQEI 120

Query: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDF 180
           VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKA+FPGSVFIRCIMNKEIHDF
Sbjct: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKALFPGSVFIRCIMNKEIHDF 180

Query: 181 IRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHD 240
           IRECDGVGGFVGAKVGNT            KRQINKPKPVSEADMEAIFKEAKEEQ RHD
Sbjct: 181 IRECDGVGGFVGAKVGNT------------KRQINKPKPVSEADMEAIFKEAKEEQERHD 240

Query: 241 QAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300
           QAFLEK Q++A NSSALETDLD NGTTA K KGRPKKAVNTLSPGSTVRVASGTFAEFEG
Sbjct: 241 QAFLEKEQDRAPNSSALETDLDTNGTTATKQKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300

Query: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIV+TK
Sbjct: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK 325

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BLAST of CcUC04G065490 vs. NCBI nr
Match: XP_008448915.1 (PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo] >XP_008448924.1 PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo])

HSP 1 Score: 567.0 bits (1460), Expect = 1.1e-157
Identity = 299/338 (88.46%), Postives = 311/338 (92.01%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIP-SASDEVQQLSARERRKL 60
           MA GLL WSPISL STS PALSF LSSS+R QLSISA+VE P +A+D+VQQLSAR+RRKL
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERRE KTTTNWREEVEERLC+KPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV+EKRKLKNGTYTVKPKAVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRH 240
           FIRECDGVGGFVGAKVGNT            KRQINKPKPVSEADMEAIFKEAKEEQ RH
Sbjct: 181 FIRECDGVGGFVGAKVGNT------------KRQINKPKPVSEADMEAIFKEAKEEQERH 240

Query: 241 DQAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFE 300
           DQAFLEK QE+A NSSAL+TDLD NGTTA KHKGR KKAVNTLSPGSTVRVASGTFAEFE
Sbjct: 241 DQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFE 300

Query: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIV+TK
Sbjct: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK 326

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BLAST of CcUC04G065490 vs. NCBI nr
Match: XP_004147896.1 (uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical protein Csa_018004 [Cucumis sativus])

HSP 1 Score: 560.8 bits (1444), Expect = 7.8e-156
Identity = 292/338 (86.39%), Postives = 307/338 (90.83%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIP-SASDEVQQLSARERRKL 60
           MACGLL WS +SL STSFPALSF LSSS+R QLS+SA+VE P +A+D+ QQLS RERRKL
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERRE KTTTNWREEVEERLC+KPKKEFA WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV+EKRKLKNGTYTV PKAVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRH 240
           FIRECDGVGGFVGAKVGNT            KRQINKPKPVSEADMEAIFKEAK+EQ RH
Sbjct: 181 FIRECDGVGGFVGAKVGNT------------KRQINKPKPVSEADMEAIFKEAKDEQERH 240

Query: 241 DQAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFE 300
           DQAFLEK QE+A N+SAL+TDLD NGTTA KHKGRPKKAVNTLSPGSTVRVASGTFAEFE
Sbjct: 241 DQAFLEKEQEEAPNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFE 300

Query: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIV+TK
Sbjct: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK 326

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BLAST of CcUC04G065490 vs. NCBI nr
Match: XP_022931956.1 (uncharacterized protein LOC111438223 [Cucurbita moschata])

HSP 1 Score: 543.5 bits (1399), Expect = 1.3e-150
Identity = 287/337 (85.16%), Postives = 304/337 (90.21%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLR 60
           MACGLLTW+ + LRS SFP+LSF LSSS R QLSISAA+E  +A+D+V QLSARERR+LR
Sbjct: 1   MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALE--TAADDVLQLSARERRRLR 60

Query: 61  NERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120
           NERRETK TTNWREEVEERLCKKPKKEFA WTEKLNLDYLAKLGPQWWVMRV+RVRGQEI
Sbjct: 61  NERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQEI 120

Query: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDF 180
           VERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKAVFPGSVFIRCIMNKE+HDF
Sbjct: 121 VERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDF 180

Query: 181 IRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHD 240
           IRECDGVGGFVGAKVGNT            KRQINKPKPVS+ DMEAIFKEAKEEQ RHD
Sbjct: 181 IRECDGVGGFVGAKVGNT------------KRQINKPKPVSQDDMEAIFKEAKEEQERHD 240

Query: 241 QAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300
           QAFLEK +EQA N S LETDLD NGTTA KHKGRPKKAVNTLSPGSTVRV+SGTFAEFEG
Sbjct: 241 QAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEG 300

Query: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           SLKK+NRKS KVTVGFTLFGKETLV+LDIGDIIV+TK
Sbjct: 301 SLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVETK 322

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BLAST of CcUC04G065490 vs. NCBI nr
Match: XP_023518856.1 (uncharacterized protein LOC111782252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.5 bits (1399), Expect = 1.3e-150
Identity = 287/337 (85.16%), Postives = 304/337 (90.21%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLR 60
           MACGLLTW+ + LRS SFP+LSF LSSS R QLSISAA+E  +A+D+V QLSARERR+LR
Sbjct: 1   MACGLLTWTALPLRSHSFPSLSFSLSSSLRTQLSISAALE--TAADDVLQLSARERRRLR 60

Query: 61  NERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120
           NERRETK TTNWREEVEERLCKKPKKEFA WTEKLNLDYLAKLGPQWWVMRV+RVRGQEI
Sbjct: 61  NERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQEI 120

Query: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDF 180
           VERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKAVFPGSVFIRCIMNKE+HDF
Sbjct: 121 VERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDF 180

Query: 181 IRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHD 240
           IRECDGVGGFVGAKVGNT            KRQINKPKPVS+ DMEAIFKEAKE+Q RHD
Sbjct: 181 IRECDGVGGFVGAKVGNT------------KRQINKPKPVSQDDMEAIFKEAKEQQERHD 240

Query: 241 QAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300
           QAFLEK +EQA N S LETDLD NGTTA KHKGRPKKAVNTLSPGSTVRVASGTFAEFEG
Sbjct: 241 QAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300

Query: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           SLKK+NRKSGKVTVGFTLFGKETLV+LDIGDI V+TK
Sbjct: 301 SLKKVNRKSGKVTVGFTLFGKETLVELDIGDIKVETK 322

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BLAST of CcUC04G065490 vs. ExPASy Swiss-Prot
Match: P35872 (Transcription termination/antitermination protein NusG OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=nusG PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.4e-08
Identity = 53/205 (25.85%), Postives = 85/205 (41.46%), Query Frame = 0


Query: 134 DLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMN-----KEIHDFIRECDGVG 193
           D  F++  P+ +     + G   V  K +FPG +FI+  +       E  + +R   G+ 
Sbjct: 33  DKIFQVLIPTEEVVELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEAWEVVRGTPGIT 92

Query: 194 GFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHDQAFLEKRQ 253
           GFVGA +                    +P P+S             ++VRH         
Sbjct: 93  GFVGAGM--------------------RPVPLS------------PDEVRH--------- 152

Query: 254 EQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRK 313
                       L+++G   +  K    KA      G  VRV SG FA+F G++ ++N +
Sbjct: 153 -----------ILEVSG---LLGKKEAPKAQVAFREGDQVRVVSGPFADFTGTVTEINPE 182

Query: 314 SGKVTVGFTLFGKETLVDLDIGDII 334
            GKV V  T+FG+ET V+LD   ++
Sbjct: 213 RGKVKVMVTIFGRETPVELDFSQVV 182

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BLAST of CcUC04G065490 vs. ExPASy Swiss-Prot
Match: P29397 (Transcription termination/antitermination protein NusG OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=nusG PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 43/178 (24.16%), Postives = 71/178 (39.89%), Query Frame = 0


Query: 155 YTVKPKAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQI 214
           Y  K + +FPG VF+  IMN E ++F+R    V GFV +                     
Sbjct: 224 YKTKRRKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSG-------------------- 283

Query: 215 NKPKPVSEADMEAIFKEAKEEQVRHDQAFLEKRQEQASNSSALETDLDINGTTAIKHKGR 274
            +P PV + +M  I + A                                G    + K +
Sbjct: 284 GQPVPVKDREMRPILRLA--------------------------------GLEEYEEKKK 343

Query: 275 PKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 333
           P K       G  V++ SG F +F G +K+++ +  ++ V  T+FG+ET V L + ++
Sbjct: 344 PVKVELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEV 349

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BLAST of CcUC04G065490 vs. ExPASy Swiss-Prot
Match: Q06795 (Transcription termination/antitermination protein NusG OS=Bacillus subtilis (strain 168) OX=224308 GN=nusG PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07
Identity = 52/199 (26.13%), Postives = 79/199 (39.70%), Query Frame = 0


Query: 134 DLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGA 193
           D  F++  P  +E+  +KNG   V  K VFPG V +  +M  +    +R   GV GFVG 
Sbjct: 33  DKIFRVVVPE-EEETDIKNGKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVG- 92

Query: 194 KVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHDQAFLEKRQEQASN 253
                           S    +KP P+   + E I K    ++                 
Sbjct: 93  ----------------SAGSGSKPTPLLPGEAETILKRMGMDE----------------- 152

Query: 254 SSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 313
               +TD+D      +K                TV+V  G FA F GS+++++    KV 
Sbjct: 153 ---RKTDIDFE----LK---------------ETVKVIDGPFANFTGSIEEIDYDKSKVK 174

Query: 314 VGFTLFGKETLVDLDIGDI 333
           V   +FG+ET V+L+   I
Sbjct: 213 VFVNMFGRETPVELEFTQI 174

[Close]

BLAST of CcUC04G065490 vs. ExPASy Swiss-Prot
Match: Q9HWC4 (Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nusG PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.7e-07
Identity = 42/230 (18.26%), Postives = 85/230 (36.96%), Query Frame = 0


Query: 103 LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAV 162
           +  +W+V+       + ++  L   +     + +F       +E  +++NG      +  
Sbjct: 1   MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEEEFGEILVPTEEVVEMRNGQKRKSERKF 60

Query: 163 FPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSE 222
           FPG V ++  MN+     +++   V GF+G                      +KP P+++
Sbjct: 61  FPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTA-------------------DKPAPITD 120

Query: 223 ADMEAIFKEAKEEQVRHDQAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTL 282
            + +AI +                                      +   G   K     
Sbjct: 121 READAILRR-------------------------------------VADSGDKPKPKTLF 174

Query: 283 SPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 333
            PG TVRV  G FA+F G ++++N +  ++ V   +FG+ T V+L+   +
Sbjct: 181 EPGETVRVIDGPFADFNGVVEEVNYEKSRIQVAVLIFGRSTPVELEFSQV 174

[Close]

BLAST of CcUC04G065490 vs. ExPASy Swiss-Prot
Match: Q8DD25 (Transcription termination/antitermination protein NusG OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=nusG PE=3 SV=3)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-06
Identity = 47/214 (21.96%), Postives = 87/214 (40.65%), Query Frame = 0


Query: 123 RLARSLARNYPDLDFKIYYPSV----QEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIH 182
           R+A+SL  +      + Y+  V    +E  +++ G      +  FPG V ++ IMN E  
Sbjct: 21  RVAQSLREHIKMHGMEEYFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMIMNDESW 80

Query: 183 DFIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVR 242
             +R    V GF+G                      ++P P+S+ + +AI          
Sbjct: 81  HLVRSVPRVMGFIGG-------------------TSDRPAPISDKEADAIL--------- 140

Query: 243 HDQAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEF 302
                   R E+AS +    T  ++                     G  VRV  G FA+F
Sbjct: 141 -------NRLEKASEAPRPRTMYEV---------------------GEVVRVNEGPFADF 178

Query: 303 EGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 333
            G++++++ +  ++ V  ++FG+ T V+L+ G +
Sbjct: 201 NGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQV 178

[Close]

BLAST of CcUC04G065490 vs. ExPASy TrEMBL
Match: A0A1S3BKU2 (transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 GN=LOC103490936 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 5.3e-158
Identity = 299/338 (88.46%), Postives = 311/338 (92.01%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIP-SASDEVQQLSARERRKL 60
           MA GLL WSPISL STS PALSF LSSS+R QLSISA+VE P +A+D+VQQLSAR+RRKL
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERRE KTTTNWREEVEERLC+KPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV+EKRKLKNGTYTVKPKAVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRH 240
           FIRECDGVGGFVGAKVGNT            KRQINKPKPVSEADMEAIFKEAKEEQ RH
Sbjct: 181 FIRECDGVGGFVGAKVGNT------------KRQINKPKPVSEADMEAIFKEAKEEQERH 240

Query: 241 DQAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFE 300
           DQAFLEK QE+A NSSAL+TDLD NGTTA KHKGR KKAVNTLSPGSTVRVASGTFAEFE
Sbjct: 241 DQAFLEKEQEEAPNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFE 300

Query: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIV+TK
Sbjct: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK 326

[Close]

BLAST of CcUC04G065490 vs. ExPASy TrEMBL
Match: A0A0A0KZV1 (NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.8e-156
Identity = 292/338 (86.39%), Postives = 307/338 (90.83%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIP-SASDEVQQLSARERRKL 60
           MACGLL WS +SL STSFPALSF LSSS+R QLS+SA+VE P +A+D+ QQLS RERRKL
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERRE KTTTNWREEVEERLC+KPKKEFA WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV+EKRKLKNGTYTV PKAVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRH 240
           FIRECDGVGGFVGAKVGNT            KRQINKPKPVSEADMEAIFKEAK+EQ RH
Sbjct: 181 FIRECDGVGGFVGAKVGNT------------KRQINKPKPVSEADMEAIFKEAKDEQERH 240

Query: 241 DQAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFE 300
           DQAFLEK QE+A N+SAL+TDLD NGTTA KHKGRPKKAVNTLSPGSTVRVASGTFAEFE
Sbjct: 241 DQAFLEKEQEEAPNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFE 300

Query: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIV+TK
Sbjct: 301 GSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK 326

[Close]

BLAST of CcUC04G065490 vs. ExPASy TrEMBL
Match: A0A6J1EV13 (uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC111438223 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 6.2e-151
Identity = 287/337 (85.16%), Postives = 304/337 (90.21%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLR 60
           MACGLLTW+ + LRS SFP+LSF LSSS R QLSISAA+E  +A+D+V QLSARERR+LR
Sbjct: 1   MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALE--TAADDVLQLSARERRRLR 60

Query: 61  NERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120
           NERRETK TTNWREEVEERLCKKPKKEFA WTEKLNLDYLAKLGPQWWVMRV+RVRGQEI
Sbjct: 61  NERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQEI 120

Query: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDF 180
           VERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKAVFPGSVFIRCIMNKE+HDF
Sbjct: 121 VERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDF 180

Query: 181 IRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHD 240
           IRECDGVGGFVGAKVGNT            KRQINKPKPVS+ DMEAIFKEAKEEQ RHD
Sbjct: 181 IRECDGVGGFVGAKVGNT------------KRQINKPKPVSQDDMEAIFKEAKEEQERHD 240

Query: 241 QAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300
           QAFLEK +EQA N S LETDLD NGTTA KHKGRPKKAVNTLSPGSTVRV+SGTFAEFEG
Sbjct: 241 QAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEG 300

Query: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           SLKK+NRKS KVTVGFTLFGKETLV+LDIGDIIV+TK
Sbjct: 301 SLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVETK 322

[Close]

BLAST of CcUC04G065490 vs. ExPASy TrEMBL
Match: A0A6J1DDH4 (uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019492 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 8.1e-151
Identity = 289/336 (86.01%), Postives = 303/336 (90.18%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLR 60
           MA GLL WS ISLRS+SFPALSF LSSSK  QLSISAA+E  +A+D+VQQLSARERR+LR
Sbjct: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALE-TAAADDVQQLSARERRRLR 60

Query: 61  NERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120
           NERRE KTTTNWREEVEERLCKKPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVRGQEI
Sbjct: 61  NERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120

Query: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDF 180
           VERLARSLARNYPDLDFKIYYPSVQEKR+LKNGTY VKP+AVFPGSVFIRCIMNKEIHDF
Sbjct: 121 VERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDF 180

Query: 181 IRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHD 240
           IRECDGVGGFVGAKVGNT            KRQINKPKPVSEADMEAIFKEAKEEQ RHD
Sbjct: 181 IRECDGVGGFVGAKVGNT------------KRQINKPKPVSEADMEAIFKEAKEEQERHD 240

Query: 241 QAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300
           Q FLEK QE+A NS+  +TDLD NGTTA K KGR KKAVN LSPGSTVRVASGTFAEFEG
Sbjct: 241 QDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEG 300

Query: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDT 337
           SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI+V+T
Sbjct: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIVVET 323

[Close]

BLAST of CcUC04G065490 vs. ExPASy TrEMBL
Match: A0A6J1HQX6 (uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 3.1e-150
Identity = 287/337 (85.16%), Postives = 304/337 (90.21%), Query Frame = 0


Query: 1   MACGLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLR 60
           MAC LLTW+ +SLRS SFP+LSF LSSS R QLSISAA+E  +A+D+V QLSARERR+LR
Sbjct: 1   MACRLLTWTTLSLRSPSFPSLSFSLSSSLRTQLSISAALE--TAADDVLQLSARERRRLR 60

Query: 61  NERRETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120
           NERRETK TTNWREEVEERLCKKPKKEFA WTEKLNLDYL+KLGPQWWVMRV+RVRGQEI
Sbjct: 61  NERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLSKLGPQWWVMRVSRVRGQEI 120

Query: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDF 180
           VERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKAVFPGSVFIRCIMNKE+HDF
Sbjct: 121 VERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDF 180

Query: 181 IRECDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHD 240
           IRECDGVGGFVGAKVGNT            KRQINKPKPVS+ DMEAIFKEAKEEQ RHD
Sbjct: 181 IRECDGVGGFVGAKVGNT------------KRQINKPKPVSQDDMEAIFKEAKEEQERHD 240

Query: 241 QAFLEKRQEQASNSSALETDLDINGTTAIKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300
           QAFLEK++EQA N S LET LD NGTTA KHKGRPKKAVNTLSPGSTVRVASGTFAEFEG
Sbjct: 241 QAFLEKQKEQAPNPSVLETGLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEG 300

Query: 301 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVDTK 338
           SLKK+NRKSGKVTVGFTLFGKETLV LDIGDIIV+TK
Sbjct: 301 SLKKVNRKSGKVTVGFTLFGKETLVVLDIGDIIVETK 322

[Close]

BLAST of CcUC04G065490 vs. TAIR 10
Match: AT3G09210.1 (plastid transcriptionally active 13 )

HSP 1 Score: 328.6 bits (841), Expect = 6.0e-90
Identity = 188/346 (54.34%), Postives = 245/346 (70.81%), Query Frame = 0


Query: 4   GLLTWSPISLRSTSFPALSFPLSSSKRIQLSISAAVEIPSASDEVQQLSARERRKLRNER 63
           GLL WS    RS+  P++  P++   + Q SI+A V      +   QL+A+ERR+LRNER
Sbjct: 7   GLLQWS----RSSLIPSIYTPIN---KTQFSIAACV-----IERNHQLTAKERRQLRNER 66

Query: 64  RETKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQEIVER 123
           RE+K   +WREEVEE+L KKPKK +ATWTE+LNLD LA+ GPQWW +RV+R+RG E  + 
Sbjct: 67  RESKLGYSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQI 126

Query: 124 LARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKAVFPGSVFIRCIMNKEIHDFIRE 183
           LAR+LAR +P+++F +Y PSVQ KRKLKNG+ +VKPK VFPG +FIRCI+NKEIHD IR+
Sbjct: 127 LARALARQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRD 186

Query: 184 CDGVGGFVGAKVGNTQSVVLIVWAIYSKRQINKPKPVSEADMEAIFKEAKEEQVRHDQAF 243
            DGVGGF+G+KVGNT            KRQINKP+PV ++D+EAIFK+AKE Q + D  F
Sbjct: 187 VDGVGGFIGSKVGNT------------KRQINKPRPVDDSDLEAIFKQAKEAQEKADSEF 246

Query: 244 LE--KRQEQASNSSALE----TDLDINGTTA-IKHKGRPKKAV---------NTLSPGST 303
            E  + +E+AS  ++ E    ++ D+  T A  K K  P+KA            L+ GST
Sbjct: 247 EEADRAEEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETKAKKKKLAAGST 306

Query: 304 VRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDII 334
           VRV SGTFAEF G+LKKLNRK+ K TVGFTLFGKETLV++DI +++
Sbjct: 307 VRVLSGTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELV 328

The following BLAST results are available for this feature:

BLAST of CcUC04G065490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880828.1	7.3e-162	89.91	transcription termination/antitermination protein NusG isoform X1 [Benincasa his...	[more]
XP_008448915.1	1.1e-157	88.46	PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo]...	[more]
XP_004147896.1	7.8e-156	86.39	uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical ...	[more]
XP_022931956.1	1.3e-150	85.16	uncharacterized protein LOC111438223 [Cucurbita moschata]	[more]
XP_023518856.1	1.3e-150	85.16	uncharacterized protein LOC111782252 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC04G065490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35872	7.4e-08	25.85	Transcription termination/antitermination protein NusG OS=Thermus thermophilus (...	[more]
P29397	1.3e-07	24.16	Transcription termination/antitermination protein NusG OS=Thermotoga maritima (s...	[more]
Q06795	1.6e-07	26.13	Transcription termination/antitermination protein NusG OS=Bacillus subtilis (str...	[more]
Q9HWC4	3.7e-07	18.26	Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa...	[more]
Q8DD25	1.8e-06	21.96	Transcription termination/antitermination protein NusG OS=Vibrio vulnificus (str...	[more]

BLAST of CcUC04G065490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BKU2	5.3e-158	88.46	transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 G...	[more]
A0A0A0KZV1	3.8e-156	86.39	NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV...	[more]
A0A6J1EV13	6.2e-151	85.16	uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC1114382...	[more]
A0A6J1DDH4	8.1e-151	86.01	uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1HQX6	3.1e-150	85.16	uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889...	[more]

BLAST of CcUC04G065490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09210.1	6.0e-90	54.34	plastid transcriptionally active 13	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006645	NusG, N-terminal	SMART	SM00738	nusgn_4	coord: 104..232 e-value: 2.3E-18 score: 77.0
IPR006645	NusG, N-terminal	PFAM	PF02357	NusG	coord: 106..203 e-value: 1.8E-8 score: 34.8
IPR036735	NusG, N-terminal domain superfamily	GENE3D	3.30.70.940		coord: 105..233 e-value: 9.7E-17 score: 63.0
IPR036735	NusG, N-terminal domain superfamily	SUPERFAMILY	82679	N-utilization substance G protein NusG, N-terminal domain	coord: 105..233
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 280..333 e-value: 3.4E-12 score: 48.1
IPR043425	NusG-like	PANTHER	PTHR30265	RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG	coord: 33..332
None	No IPR available	PANTHER	PTHR30265:SF4	TRANSCRIPTION ANTITERMINATION PROTEIN RFAH	coord: 33..332
None	No IPR available	CDD	cd09890	NGN_plant	coord: 106..229 e-value: 2.18246E-46 score: 151.351
None	No IPR available	CDD	cd06091	KOW_NusG	coord: 282..332 e-value: 1.21418E-12 score: 60.1636
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 282..332

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G065490.1	CcUC04G065490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated