CcUC04G065050 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G065050
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pyruvate decarboxylase
Location	CicolChr04: 21956451 .. 21958517 (-)
RNA-Seq Expression	CcUC04G065050
Synteny	CcUC04G065050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATCCAGTAATATGACTATGATATCGGAGACGGGTGACTCTTGGTTTCATTGTCAAAAACTAAAACTACCAAGATCATGCGGGTACATAATTTAGTTTCTTCTCCACTTTAAATCTTATTTCGGTTTCTAAGTTTTTATTATATATATATATATATATATTATCTTCAACTATCAGAAACTTTTATTTTTATTAATTAAGGATATATATCTGAATACATGTACTAATATTAACATCAACAAGATTTCAACTTAACAATGACAAAAAGAAAAATGATTATTTTTTAAAAGTTCAAAGAGTACAACATACAATTTAAAATCGTAGAGACCGACATATATAGATCATTTGAAAGTTTAGGAACTTAAAATCTTAATCCTTAAACTTGAGATGTATGTAAACTAACACAGACAAATTAAAATTTTAAAGTCGACTATGATATGAAATGACATTGATTAAATTTTTAGGTATGAGGTGCAATTGTTGTATGCATCAATTGGATGGTCTCTTGGTGCAACTTTAGGATATGCACAAGTTGCGCCAGAAGAGCGTGTGGTTCTTTGTATTGGTGATGGAAGTTTTCAGGTGAATTTTTATATTAATAAATAAGTTTATTCTAAAGTTATTATTGTTTATATGTTTTATTCTAAAGTTAAATTTGAATATTTTAAATTGAATTCAATATATATATATATATATATATATGATGATTGTGACGGATGGCTTTACAAGATGTGTCTACAATGCTAAGGTTGGGGCAAAATAATATCATATTTTTGATAAATAATTGTGGATGCACAATTGAAGTAGAAATTCATGATGGCCCTTACAATATTATCAAGAATACACATGCATTATTGATGCTATTCACAATCATCACGGCAATTGTTGGACAACCGAGGTGAAATCTCAATTAAGTTTTTTACTTTTAATTTCCGTATACAATATTTGAATATAAAAGGAAAATATAGATAAATATGCTTTGCCCTATTTTCCATTTTTCCAAACCTCATAAACCCTAATGTCCGGTTTGATAATGTAGAGACCTAAATACTACAAAACCCAAACATAAGAATGAAAAATATCTTTTTTTTTTCGCTAATTTTTTGAACTATCAAATGACCAATAACAAATAGTTGTTTGATAAAATCGGTCAAGTACATAAAGTCGGAGACAAGAGAGAAAAGAAAACATTTCATTCATTTATGCTTTTTCATGAATGGTTTCTTTAAAATAAAATTTTGTTGGCACGTTAGGTTCATACAGAGGAAGAGTTGGTGAATGCAATTGAGATAACAATGGGAGATCGAAATGATTGTTTGTGCCTCATTGAGGTCATTGTTCATAGAGATGATATGAGTAAAGAATTACTTGAATTTGGAAGCAAGATTGCAGCTATGGGTAGTCGTCCTCAAAACTTTTGTAAAGTTGAATATTCATGCATAATTCAACTTGCATATAGTATGTATTAGCGTGATCAAGAGGTAGTTTGCAGTTATAATTCTCCTATCTCTATTATAGTCATTAAACAAAATAATGTTAAAAATGAATAAAATTATATAAAATGTTCAATCAAATGCCATGAATCTTTCCCTTCCTTTCTTGAGGGGTTAAAACTAAGACCAAATAGAACAATATAATTTTGAGCAAGAGAAGCTGAAAACAGGAAGGAAAAAAAAAAAAAAAAAAAACTTACAATTATTTGATTCGTATTAAAGACATTGGTGTCCTTCTATCTTTGCACATCACGTCTGAATTTATTGTATGGAAAACTATATCTTTCATTATTGATGTATGTCTGTTTTTTTCTGTTTTTTATTTCTTTTTTAGATTTTTAATTTATGAGATCAACCTATAATTATTTTTTAATTAGTTGTACGACTATTTGCACATAAGTATGTATTTTGTACCATTATTTTTATTCATTAATTCTAAGAATTGTGCACCTAATGAAATATAATTATATATTTTTACTATTATTGTCAAAAGTCAAATTTAGCAACAATTATTCCAAAAAGAAAAAAAAAAAGCTTTAAGTTAGGAGGATTGTTTAATAGATTGACGTAA

mRNA sequence

ATGCTATCCAGTAATATGACTATGATATCGGAGACGGGTGACTCTTGGTTTCATTGTCAAAAACTAAAACTACCAAGATCATGCGGGTATGAGGTGCAATTGTTGTATGCATCAATTGGATGGTCTCTTGGTGCAACTTTAGGATATGCACAAGTTGCGCCAGAAGAGCGTGTGGTTCTTTGTATTGGTGATGGAAGTTTTCAGGTTCATACAGAGGAAGAGTTGGTGAATGCAATTGAGATAACAATGGGAGATCGAAATGATTGTTTGTGCCTCATTGAGTTGTACGACTATTTGCACATAAGAGGATTGTTTAATAGATTGACGTAA

Coding sequence (CDS)

ATGCTATCCAGTAATATGACTATGATATCGGAGACGGGTGACTCTTGGTTTCATTGTCAAAAACTAAAACTACCAAGATCATGCGGGTATGAGGTGCAATTGTTGTATGCATCAATTGGATGGTCTCTTGGTGCAACTTTAGGATATGCACAAGTTGCGCCAGAAGAGCGTGTGGTTCTTTGTATTGGTGATGGAAGTTTTCAGGTTCATACAGAGGAAGAGTTGGTGAATGCAATTGAGATAACAATGGGAGATCGAAATGATTGTTTGTGCCTCATTGAGTTGTACGACTATTTGCACATAAGAGGATTGTTTAATAGATTGACGTAA

Protein sequence

MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVLCIGDGSFQVHTEEELVNAIEITMGDRNDCLCLIELYDYLHIRGLFNRLT

Homology

[Close]

BLAST of CcUC04G065050 vs. NCBI nr
Match: XP_038881467.1 (pyruvate decarboxylase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40
Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           ML++NMT+ISETGDSWFHCQKLKLP+SCGYEVQLLYASIGWSLGATLGYAQ AP ERVVL
Sbjct: 403 MLTNNMTVISETGDSWFHCQKLKLPKSCGYEVQLLYASIGWSLGATLGYAQAAPNERVVL 462

Query: 61  CIGDGSFQVHTEEELVNAIEITMGDRNDCLCLIE 95
           CIGDGSFQV TEEELVNAIE  MGD+++CLC IE
Sbjct: 463 CIGDGSFQVQTEEELVNAIETAMGDKSNCLCFIE 496

[Close]

BLAST of CcUC04G065050 vs. NCBI nr
Match: XP_023518080.1 (pyruvate decarboxylase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.8 bits (390), Expect = 4.2e-34
Identity = 82/158 (51.90%), Postives = 91/158 (57.59%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS M++ISETGDSWFHCQKLKLP+SCGYE+QLLYASIGWSLGATLGYAQ AP++RV+L
Sbjct: 418 MLSSQMSVISETGDSWFHCQKLKLPKSCGYEMQLLYASIGWSLGATLGYAQAAPQDRVIL 477

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           C+GDGSFQ                                                    
Sbjct: 478 CVGDGSFQMTPQEVSTMIKLGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAIVNAM 537

[Close]

BLAST of CcUC04G065050 vs. NCBI nr
Match: XP_038881465.1 (pyruvate decarboxylase 1-like [Benincasa hispida])

HSP 1 Score: 152.5 bits (384), Expect = 2.1e-33
Identity = 83/158 (52.53%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           ML++NMT+ISETGDSWFH QKLKLP+SCGYE+QLLYASIGWSLGATLGYAQ AP+ERVVL
Sbjct: 437 MLTNNMTVISETGDSWFHSQKLKLPKSCGYEIQLLYASIGWSLGATLGYAQAAPKERVVL 496

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           CIGDGSFQ                                                    
Sbjct: 497 CIGDGSFQMTPQDVSTMLRLGQNNIIFLINNGGYTIEVEIHDGPYNVIKNWDYTAIVDAM 556

[Close]

BLAST of CcUC04G065050 vs. NCBI nr
Match: XP_038882334.1 (pyruvate decarboxylase 2-like [Benincasa hispida])

HSP 1 Score: 151.0 bits (380), Expect = 6.0e-33
Identity = 82/158 (51.90%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           ML++NMT+ISETGDSWFH QKLKLP+SCGYE+QLLYASIGWSLGATLGYAQ AP+ERVVL
Sbjct: 181 MLTNNMTVISETGDSWFHSQKLKLPKSCGYEIQLLYASIGWSLGATLGYAQAAPKERVVL 240

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           CIGDGSFQ                                                    
Sbjct: 241 CIGDGSFQMTPQDVSTMLRLGQNNIIFLINNGGYTIEVEIHDGPYNVIKNWDYTAIVDAM 300

[Close]

BLAST of CcUC04G065050 vs. NCBI nr
Match: XP_022931872.1 (pyruvate decarboxylase 1-like [Cucurbita moschata])

HSP 1 Score: 150.2 bits (378), Expect = 1.0e-32
Identity = 79/158 (50.00%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS M++ISETGDSWFHCQKLKLP+SCGYE+QLLYASIGWSLGATLGYAQ AP++RV+L
Sbjct: 434 MLSSQMSVISETGDSWFHCQKLKLPKSCGYEMQLLYASIGWSLGATLGYAQAAPQDRVIL 493

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           C+GDGSFQ                                                    
Sbjct: 494 CVGDGSFQMTPQEVSTMIKLGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAIVDAM 553

[Close]

BLAST of CcUC04G065050 vs. ExPASy Swiss-Prot
Match: P51845 (Pyruvate decarboxylase 1 (Fragment) OS=Nicotiana tabacum OX=4097 GN=PDC1 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-26
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLS +  +I+ETGDSWF+CQKLKLP+ CGYE Q+ Y SIGWS+GATLGYAQ APE+RV+ 
Sbjct: 324 MLSGDSVVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAAPEKRVIA 383

Query: 61  CIGDGSFQVHTEE 74
           CIGDGSFQV  ++
Sbjct: 384 CIGDGSFQVTAQD 396

[Close]

BLAST of CcUC04G065050 vs. ExPASy Swiss-Prot
Match: P51851 (Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum OX=3888 GN=PDC2 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.4e-26
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS   +I+ETGDSWF+CQKLKLP  CGYE Q+ Y SIGWS+GATLGYAQ  PE+RV+ 
Sbjct: 219 MLSSETAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIA 278

Query: 61  CIGDGSFQVHTEE 74
           CIGDGSFQV  ++
Sbjct: 279 CIGDGSFQVTAQD 291

[Close]

BLAST of CcUC04G065050 vs. ExPASy Swiss-Prot
Match: Q9FFT4 (Pyruvate decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=PDC2 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.2e-25
Identity = 49/73 (67.12%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS   +++ETGDSWF+CQKLKLP  CGYE Q+ Y SIGWS+GATLGYAQ  P  RV+ 
Sbjct: 421 MLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAMPNRRVIA 480

Query: 61  CIGDGSFQVHTEE 74
           CIGDGSFQV  ++
Sbjct: 481 CIGDGSFQVTAQD 493

[Close]

BLAST of CcUC04G065050 vs. ExPASy Swiss-Prot
Match: O82647 (Pyruvate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PDC1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24
Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS   +I+ETGDSWF+CQKLKLP+ CGYE Q+ Y SIGWS+GATLGYAQ +PE+RV+ 
Sbjct: 421 MLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQASPEKRVLA 480

Query: 61  CIGDGSFQVHTEE 74
            IGDGSFQV  ++
Sbjct: 481 FIGDGSFQVTVQD 493

[Close]

BLAST of CcUC04G065050 vs. ExPASy Swiss-Prot
Match: A2Y5L9 (Pyruvate decarboxylase 1 OS=Oryza sativa subsp. indica OX=39946 GN=PDC1 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-24
Identity = 62/158 (39.24%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLS +  +I+ETGDSWF+CQKL+LP  CGYE Q+ Y SIGWS+GATLGYAQ A ++RV+ 
Sbjct: 419 MLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIS 478

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           CIGDGSFQ                                                    
Sbjct: 479 CIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAI 538

[Close]

BLAST of CcUC04G065050 vs. ExPASy TrEMBL
Match: A0A6J1EUY4 (Pyruvate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111438155 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.0e-33
Identity = 79/158 (50.00%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS M++ISETGDSWFHCQKLKLP+SCGYE+QLLYASIGWSLGATLGYAQ AP++RV+L
Sbjct: 434 MLSSQMSVISETGDSWFHCQKLKLPKSCGYEMQLLYASIGWSLGATLGYAQAAPQDRVIL 493

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           C+GDGSFQ                                                    
Sbjct: 494 CVGDGSFQMTPQEVSTMIKLGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAIVDAM 553

[Close]

BLAST of CcUC04G065050 vs. ExPASy TrEMBL
Match: A0A0A0L1C6 (Pyruvate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_4G312250 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 82/158 (51.90%), Postives = 89/158 (56.33%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSSNMT+I+ETGDSWFH QKLKLP+SCGYEVQLLYASIGWSLGATLGYAQ AP +R++L
Sbjct: 452 MLSSNMTVIAETGDSWFHSQKLKLPKSCGYEVQLLYASIGWSLGATLGYAQAAPHKRLLL 511

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           CIGDGSFQ                                                    
Sbjct: 512 CIGDGSFQMAPQDVSTMLKLGQKNIIFLINNGGYTIEVEIHDGPYNIINNWDYTAFVDAV 571

[Close]

BLAST of CcUC04G065050 vs. ExPASy TrEMBL
Match: A0A6J1CS04 (Pyruvate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111013786 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 82/157 (52.23%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSSNMT+ISE GDSWFHCQKLKLP+SCGYEVQLLYASIGWSLGATLGYAQ AP++RVVL
Sbjct: 420 MLSSNMTVISEAGDSWFHCQKLKLPKSCGYEVQLLYASIGWSLGATLGYAQAAPQQRVVL 479

Query: 61  CIGDGSFQ---------------------------------------------------- 95
           CIGDGSFQ                                                    
Sbjct: 480 CIGDGSFQMSPQDVSTMLRLGQKNIIFLINNGGYTIEVEIHDGPYNVIKNWDYTAMVNAM 539

[Close]

BLAST of CcUC04G065050 vs. ExPASy TrEMBL
Match: A0A1S3CKY9 (Pyruvate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103502149 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 80/158 (50.63%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSSNMT+I+ETGDSWFH QKLKLP+SCGYE+QLLYASIGWSLGATLGYAQ AP++R+VL
Sbjct: 449 MLSSNMTVIAETGDSWFHSQKLKLPKSCGYEIQLLYASIGWSLGATLGYAQSAPQKRLVL 508

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           CIGDGSFQ                                                    
Sbjct: 509 CIGDGSFQMAPQDVSTMLKLGQNNIIFLINNGGYTIEVEIHDGPYNIINNWDYTAFVEAV 568

[Close]

BLAST of CcUC04G065050 vs. ExPASy TrEMBL
Match: A0A5D3E0N5 (Pyruvate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold669G00060 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 80/158 (50.63%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSSNM +ISE GDSWFHCQ+LKLP+SCGYEVQLLYASIGWSLGATLGYAQ APEERVVL
Sbjct: 455 MLSSNMVVISEAGDSWFHCQRLKLPKSCGYEVQLLYASIGWSLGATLGYAQAAPEERVVL 514

Query: 61  CIGDGSFQ---------------------------------------------------- 96
           CIGDGSFQ                                                    
Sbjct: 515 CIGDGSFQMTPQDVSTMITLKQNNIIFLINNGGYTIEVEIHDGPYNVIKNWDYTAIVKAM 574

[Close]

BLAST of CcUC04G065050 vs. TAIR 10
Match: AT5G54960.1 (pyruvate decarboxylase-2 )

HSP 1 Score: 114.4 bits (285), Expect = 5.8e-26
Identity = 49/73 (67.12%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS   +++ETGDSWF+CQKLKLP  CGYE Q+ Y SIGWS+GATLGYAQ  P  RV+ 
Sbjct: 421 MLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAMPNRRVIA 480

Query: 61  CIGDGSFQVHTEE 74
           CIGDGSFQV  ++
Sbjct: 481 CIGDGSFQVTAQD 493

[Close]

BLAST of CcUC04G065050 vs. TAIR 10
Match: AT4G33070.1 (Thiamine pyrophosphate dependent pyruvate decarboxylase family protein )

HSP 1 Score: 114.0 bits (284), Expect = 7.6e-26
Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS   +I+ETGDSWF+CQKLKLP+ CGYE Q+ Y SIGWS+GATLGYAQ +PE+RV+ 
Sbjct: 421 MLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQASPEKRVLA 480

Query: 61  CIGDGSFQVHTEE 74
            IGDGSFQV  ++
Sbjct: 481 FIGDGSFQVTVQD 493

[Close]

BLAST of CcUC04G065050 vs. TAIR 10
Match: AT5G01320.1 (Thiamine pyrophosphate dependent pyruvate decarboxylase family protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-25
Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLSS   +I+ETGDSWF+CQKLKLP+ CGYE Q+ Y SIGWS+GATLGYAQ  PE+RV+ 
Sbjct: 417 MLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRVLS 476

Query: 61  CIGDGSFQVHTEE 74
            IGDGSFQV  ++
Sbjct: 477 FIGDGSFQVTAQD 489

[Close]

BLAST of CcUC04G065050 vs. TAIR 10
Match: AT5G01330.1 (pyruvate decarboxylase-3 )

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-25
Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 1   MLSSNMTMISETGDSWFHCQKLKLPRSCGYEVQLLYASIGWSLGATLGYAQVAPEERVVL 60
           MLS+   +I+ETGDSWF+CQKLKLP+ CGYE Q+ Y SIGWS+GATLGYAQ  PE+RV+ 
Sbjct: 406 MLSNETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRVLS 465

Query: 61  CIGDGSFQVHTEE 74
            IGDGSFQV  ++
Sbjct: 466 FIGDGSFQVTAQD 478

The following BLAST results are available for this feature:

BLAST of CcUC04G065050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881467.1	1.0e-40	86.17	pyruvate decarboxylase 1-like isoform X1 [Benincasa hispida]	[more]
XP_023518080.1	4.2e-34	51.90	pyruvate decarboxylase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038881465.1	2.1e-33	52.53	pyruvate decarboxylase 1-like [Benincasa hispida]	[more]
XP_038882334.1	6.0e-33	51.90	pyruvate decarboxylase 2-like [Benincasa hispida]	[more]
XP_022931872.1	1.0e-32	50.00	pyruvate decarboxylase 1-like [Cucurbita moschata]	[more]

BLAST of CcUC04G065050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51845	3.3e-26	69.86	Pyruvate decarboxylase 1 (Fragment) OS=Nicotiana tabacum OX=4097 GN=PDC1 PE=2 SV...	[more]
P51851	7.4e-26	69.86	Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum OX=3888 GN=PDC2 PE=2 SV=1	[more]
Q9FFT4	8.2e-25	67.12	Pyruvate decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=PDC2 PE=2 SV=1	[more]
O82647	1.1e-24	68.49	Pyruvate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PDC1 PE=2 SV=1	[more]
A2Y5L9	1.8e-24	39.24	Pyruvate decarboxylase 1 OS=Oryza sativa subsp. indica OX=39946 GN=PDC1 PE=2 SV=...	[more]

BLAST of CcUC04G065050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUY4	5.0e-33	50.00	Pyruvate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111438155 PE=3 SV=1	[more]
A0A0A0L1C6	1.1e-32	51.90	Pyruvate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_4G312250 PE=3 SV=1	[more]
A0A6J1CS04	1.4e-32	52.23	Pyruvate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111013786 PE=3 SV=1	[more]
A0A1S3CKY9	1.2e-31	50.63	Pyruvate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103502149 PE=3 SV=1	[more]
A0A5D3E0N5	2.7e-31	50.63	Pyruvate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]

BLAST of CcUC04G065050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54960.1	5.8e-26	67.12	pyruvate decarboxylase-2	[more]
AT4G33070.1	7.6e-26	68.49	Thiamine pyrophosphate dependent pyruvate decarboxylase family protein	[more]
AT5G01320.1	1.3e-25	68.49	Thiamine pyrophosphate dependent pyruvate decarboxylase family protein	[more]
AT5G01330.1	2.9e-25	67.12	pyruvate decarboxylase-3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.970		coord: 1..84 e-value: 1.7E-19 score: 71.7
None	No IPR available	PANTHER	PTHR43452:SF25	PYRUVATE DECARBOXYLASE 1	coord: 69..95 coord: 1..70
IPR011766	Thiamine pyrophosphate enzyme, C-terminal TPP-binding	PFAM	PF02775	TPP_enzyme_C	coord: 31..80 e-value: 2.3E-7 score: 30.7
IPR012110	Thiamine pyrophosphate (TPP)-dependent enzyme	PANTHER	PTHR43452	PYRUVATE DECARBOXYLASE	coord: 1..70
IPR012110	Thiamine pyrophosphate (TPP)-dependent enzyme	PANTHER	PTHR43452	PYRUVATE DECARBOXYLASE	coord: 69..95
IPR029061	Thiamin diphosphate-binding fold	SUPERFAMILY	52518	Thiamin diphosphate-binding fold (THDP-binding)	coord: 2..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G065050.1	CcUC04G065050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016831	carboxy-lyase activity
molecular_function	GO:0030976	thiamine pyrophosphate binding
molecular_function	GO:0003824	catalytic activity