CcUC04G064860 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G064860
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	PRA1 family protein
Location	CicolChr04: 21728688 .. 21729320 (+)
RNA-Seq Expression	CcUC04G064860
Synteny	CcUC04G064860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTCCTCTTATCCGGCCATCCTCCCCATTTCCAATCCCCAATCCCAACCCCAACCCCAAGTTCCCCTTTCCTCCTTCGCTAACCACCTCCTCCTCTCCCTCCGCCACGCCTTCTCCCGCCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCTGAATCCCTCTCCGAAGCCACCCTCCGCATCCGCAAGAATTACTCCTATTTCCGCGTCAATTATTTCGCGATTATAGCCCTAATTCTTGCGATTTCACTTTTCTCCAATCCATCCTCTCTCTTCCTCTTAATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCCTCCGATCAGCCGCTTGTTCTGTTCGGTCGGCTCTTCAGGGATAGCGAGATCTTGATTGGCCTCGTTGTTTTCACCGCCTGTGTTGTCTTCTTCACCAGCGTCGGTTCCGTTCTTGTTTCCGCCCTCACCGCCGGCGTCGCCGTCGTCTGCGCTCACGGTGCTCTCCGATCTCCCGATGATCTGTTCCTTGACGAGCAGGAAGTTAACTCTAGTGGCTTTCTTGGTATCTTCGCCGGTGCTACCTCCTCCTCCTCCTCTGCCGCCGCCGTCGCTCCTTCCGGCAAATAA

mRNA sequence

ATGCAGTCCTCTTATCCGGCCATCCTCCCCATTTCCAATCCCCAATCCCAACCCCAACCCCAAGTTCCCCTTTCCTCCTTCGCTAACCACCTCCTCCTCTCCCTCCGCCACGCCTTCTCCCGCCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCTGAATCCCTCTCCGAAGCCACCCTCCGCATCCGCAAGAATTACTCCTATTTCCGCGTCAATTATTTCGCGATTATAGCCCTAATTCTTGCGATTTCACTTTTCTCCAATCCATCCTCTCTCTTCCTCTTAATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCCTCCGATCAGCCGCTTGTTCTGTTCGGTCGGCTCTTCAGGGATAGCGAGATCTTGATTGGCCTCGTTGTTTTCACCGCCTGTGTTGTCTTCTTCACCAGCGTCGGTTCCGTTCTTGTTTCCGCCCTCACCGCCGGCGTCGCCGTCGTCTGCGCTCACGGTGCTCTCCGATCTCCCGATGATCTGTTCCTTGACGAGCAGGAAGTTAACTCTAGTGGCTTTCTTGGTATCTTCGCCGGTGCTACCTCCTCCTCCTCCTCTGCCGCCGCCGTCGCTCCTTCCGGCAAATAA

Coding sequence (CDS)

ATGCAGTCCTCTTATCCGGCCATCCTCCCCATTTCCAATCCCCAATCCCAACCCCAACCCCAAGTTCCCCTTTCCTCCTTCGCTAACCACCTCCTCCTCTCCCTCCGCCACGCCTTCTCCCGCCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCTGAATCCCTCTCCGAAGCCACCCTCCGCATCCGCAAGAATTACTCCTATTTCCGCGTCAATTATTTCGCGATTATAGCCCTAATTCTTGCGATTTCACTTTTCTCCAATCCATCCTCTCTCTTCCTCTTAATCGCGCTTCTTTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCCTCCGATCAGCCGCTTGTTCTGTTCGGTCGGCTCTTCAGGGATAGCGAGATCTTGATTGGCCTCGTTGTTTTCACCGCCTGTGTTGTCTTCTTCACCAGCGTCGGTTCCGTTCTTGTTTCCGCCCTCACCGCCGGCGTCGCCGTCGTCTGCGCTCACGGTGCTCTCCGATCTCCCGATGATCTGTTCCTTGACGAGCAGGAAGTTAACTCTAGTGGCTTTCTTGGTATCTTCGCCGGTGCTACCTCCTCCTCCTCCTCTGCCGCCGCCGTCGCTCCTTCCGGCAAATAA

Protein sequence

MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQEVNSSGFLGIFAGATSSSSSAAAVAPSGK

Homology

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BLAST of CcUC04G064860 vs. NCBI nr
Match: XP_008464234.1 (PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family protein B2 [Cucumis melo var. makuwa] >TYK10948.1 PRA1 family protein B2 [Cucumis melo var. makuwa])

HSP 1 Score: 344.0 bits (881), Expect = 9.3e-91
Identity = 187/203 (92.12%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60
           MQS  PAILPISNPQS  QP +PLSSF++HLLLSLRHAFSRRRPWPELLDRSAFSKPESL
Sbjct: 1   MQSPSPAILPISNPQS--QPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60

Query: 61  SEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120
           +EATLRIRKNYSYFRVNYF IIALILAISLFSNPSSLFLLIALL SWIFLYLFRPSDQPL
Sbjct: 61  TEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPL 120

Query: 121 VLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180
           VLFGRLFRDSEILIGL+VFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE
Sbjct: 121 VLFGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180

Query: 181 QEVNSSGFLGIFAGATSSSSSAA 204
           QEVNS+GFLGIFAG  SSSS+AA
Sbjct: 181 QEVNSTGFLGIFAGPPSSSSAAA 201

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BLAST of CcUC04G064860 vs. NCBI nr
Match: KAE8649576.1 (hypothetical protein Csa_021551 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 6.7e-89
Identity = 186/211 (88.15%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 3   SSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSE 62
           S+ P ILPISNPQS  QPQ+PLSSF++HLLLSLRHAFSRRRPWPELLDRSAFSKPESLSE
Sbjct: 105 SASPVILPISNPQS--QPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSE 164

Query: 63  ATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVL 122
           ATLRIRKNYSYFRVNYF IIALILAISLFSNPSSLFLLIALL SWIFLYLFRPSDQPLVL
Sbjct: 165 ATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVL 224

Query: 123 FGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQE 182
           FGR FRDSEILIGLVVFTACVVF TSVGSVLVSA TAG AVVCAHGALRSPDDLFLDEQE
Sbjct: 225 FGRHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLDEQE 284

Query: 183 VNSSGFLGIFAGA---TSSSSSAAAVAPSGK 211
           VN++GFLGIFAGA   +SSSSS++  APSG+
Sbjct: 285 VNTTGFLGIFAGAPSSSSSSSSSSGAAPSGR 313

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BLAST of CcUC04G064860 vs. NCBI nr
Match: XP_004148598.2 (PRA1 family protein B2 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 6.7e-89
Identity = 189/214 (88.32%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MQSS-YPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPES 60
           MQSS  P ILPISNPQS  QPQ+PLSSF++HLLLSLRHAFSRRRPWPELLDRSAFSKPES
Sbjct: 1   MQSSASPVILPISNPQS--QPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPES 60

Query: 61  LSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQP 120
           LSEATLRIRKNYSYFRVNYF IIALILAISLFSNPSSLFLLIALL SWIFLYLFRPSDQP
Sbjct: 61  LSEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQP 120

Query: 121 LVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLD 180
           LVLFGR FRDSEILIGLVVFTACVVF TSVGSVLVSA TAG AVVCAHGALRSPDDLFLD
Sbjct: 121 LVLFGRHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLD 180

Query: 181 EQEVNSSGFLGIFAGA---TSSSSSAAAVAPSGK 211
           EQEVN++GFLGIFAGA   +SSSSS++  APSG+
Sbjct: 181 EQEVNTTGFLGIFAGAPSSSSSSSSSSGAAPSGR 212

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BLAST of CcUC04G064860 vs. NCBI nr
Match: XP_022978285.1 (PRA1 family protein B2-like [Cucurbita maxima])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 183/209 (87.56%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60
           M SS PAILP+SN  S+ QPQ+PLSSFA+HL LSLRHAFSRRRPWPELLDRSAFSKPESL
Sbjct: 1   MPSSSPAILPVSN--SESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESL 60

Query: 61  SEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120
           SEATLRIRKNY+YFRVNYFAIIALILA S FSNPSSLFLLIALLSSWIFLYLFRPSDQPL
Sbjct: 61  SEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120

Query: 121 VLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180
           VLFGRLFRDSEILIGLVVFTAC++F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDE
Sbjct: 121 VLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDE 180

Query: 181 QEVNSSGFLGIFAGATSSSSSAAAVAPSG 210
           QEVNS+GFLG+FAGA    S+AAA APSG
Sbjct: 181 QEVNSTGFLGLFAGA---PSAAAATAPSG 204

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BLAST of CcUC04G064860 vs. NCBI nr
Match: XP_022949813.1 (PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033749.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.9 bits (860), Expect = 2.5e-88
Identity = 183/209 (87.56%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60
           M SS PAILP+SN  S+ QPQ+PLSSFA+HL LSLRHAFSRRRPWPELLDRSAFSKPESL
Sbjct: 1   MPSSSPAILPVSN--SESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESL 60

Query: 61  SEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120
           SEATLRIRKNY+YFRVNYFAIIALILA S FSNPSSLFLLIALLSSWIFLYLFRPSDQPL
Sbjct: 61  SEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120

Query: 121 VLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180
           VLFGRLFRDSEILIGLVVFTACV+F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDE
Sbjct: 121 VLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDE 180

Query: 181 QEVNSSGFLGIFAGATSSSSSAAAVAPSG 210
           QEVNS+GFLG+FAGA S+++SA   APSG
Sbjct: 181 QEVNSTGFLGLFAGAPSAAASA---APSG 204

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BLAST of CcUC04G064860 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55
Identity = 119/209 (56.94%), Postives = 158/209 (75.60%), Query Frame = 0


Query: 3   SSYPAILPISNPQSQPQPQVPLSS-----FANHLLLSLRHAFSRRRPWPELLDRSAFSKP 62
           SS PAILP++N Q+  Q Q P++S     F + L  SLR + S+RRPW EL+DRS+F++P
Sbjct: 2   SSSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARP 61

Query: 63  ESLSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSD 122
           +SL+++  RIRKN +YF+VNY AI++L+LA SL S+P SL +L++LL SW+FLYLFR SD
Sbjct: 62  DSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSD 121

Query: 123 QPLVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLF 182
           QPLVLFGR F D E L+GLV+ T  VVF TSVGS+L SALT G+A+VC HGA R PDDLF
Sbjct: 122 QPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLF 181

Query: 183 LDEQEVNSSGFLGIFAGATSSSSSAAAVA 207
           LDEQE  ++G L     + ++S++A+ VA
Sbjct: 182 LDEQEPANAGLLSFIGNSAATSAAASVVA 210

[Close]

BLAST of CcUC04G064860 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-54
Identity = 116/218 (53.21%), Postives = 154/218 (70.64%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQP-------QPQVPLS-----SFANHLLLSLRHAFSRRRPWPEL 60
           M SS P +LPISNPQ+ P       + Q P++     +F N +  ++++  S+RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNYSYF+VNY  +   I+  SL ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  V+F T VGSVLVSA+  GVA++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSSGFLGIFAGATSSSSSAAAVA 207
           A R+P+DLFLDEQE  ++GFL    GA SS++ A   A
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVIAA 218

[Close]

BLAST of CcUC04G064860 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 117/205 (57.07%), Postives = 148/205 (72.20%), Query Frame = 0


Query: 6   PAILPISNP---QSQPQPQVP-LSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESLS 65
           P  LP++N    QSQP    P   +F + L  S+R   S+RRPW EL+DRS+ ++PESL+
Sbjct: 4   PPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLT 63

Query: 66  EATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPLV 125
           +A  RIRKN +YF+VNY AI++L+LA SLFS+P SL +LI LL  W+FLYLFRPSDQPLV
Sbjct: 64  DALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLV 123

Query: 126 LFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQ 185
           +FGR F D E L+ LV+ T  VVF TSVGS+L SAL  GVA+VC HGA   PDDLFLDEQ
Sbjct: 124 VFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQ 183

Query: 186 EVNSSGFLGIFAGATSSSSSAAAVA 207
           E  ++G L    G  S++S+AAAV+
Sbjct: 184 EPANAGLLSFLGG--SATSAAAAVS 206

[Close]

BLAST of CcUC04G064860 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-50
Identity = 116/222 (52.25%), Postives = 151/222 (68.02%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPL------------SSFANHLLLSLRHAFSRRRPWPEL 60
           M S+ P +LPIS   +    Q P+             +F N +  ++    SR RPW EL
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWI 120
           LDRSAF+KP+SLSEA  R RKN SYFRVNY  I+ALIL  SL ++P SL LL+ L +SW+
Sbjct: 61  LDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHG 180
           FLYLFRPSD+PL+LFGR F + E L GL++ T  V+FFTSVGSVL+SAL  G+A +C HG
Sbjct: 121 FLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHG 180

Query: 181 ALRSPDDLFLDEQEVNSSGFL---GIFAGATSSSSSAAAVAP 208
           A R+PDDLFLDEQ+  +SGFL   G+ A  + + S+++A +P
Sbjct: 181 AFRAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASP 222

[Close]

BLAST of CcUC04G064860 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.9e-48
Identity = 111/209 (53.11%), Postives = 144/209 (68.90%), Query Frame = 0


Query: 6   PAILPISN-----PQSQPQPQVP-LSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPES 65
           P  LPIS+      QSQ     P   +F + L  S+R + S+RRPW EL+DRSA S+PES
Sbjct: 5   PPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPES 64

Query: 66  LSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQP 125
           L++A  RIR+N  YF+VNY  I++L+LA+SL S+P SL +L+ L  +WIFLYLFRPSDQP
Sbjct: 65  LTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQP 124

Query: 126 LVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLD 185
           LV+ GR F D E L  LV+ T  VVF TSVGS+L SAL  G  +VC HGA R P+DLFLD
Sbjct: 125 LVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLD 184

Query: 186 EQEVNSSGFLGIFAGATSSSSSAAAVAPS 209
           +QE  ++G L   +GA +S++ AAA  P+
Sbjct: 185 DQEPANTGLLSFLSGAATSAAVAAASTPA 213

[Close]

BLAST of CcUC04G064860 vs. ExPASy TrEMBL
Match: A0A5D3CIC6 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00310 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 187/203 (92.12%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60
           MQS  PAILPISNPQS  QP +PLSSF++HLLLSLRHAFSRRRPWPELLDRSAFSKPESL
Sbjct: 1   MQSPSPAILPISNPQS--QPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60

Query: 61  SEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120
           +EATLRIRKNYSYFRVNYF IIALILAISLFSNPSSLFLLIALL SWIFLYLFRPSDQPL
Sbjct: 61  TEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPL 120

Query: 121 VLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180
           VLFGRLFRDSEILIGL+VFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE
Sbjct: 121 VLFGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180

Query: 181 QEVNSSGFLGIFAGATSSSSSAA 204
           QEVNS+GFLGIFAG  SSSS+AA
Sbjct: 181 QEVNSTGFLGIFAGPPSSSSAAA 201

[Close]

BLAST of CcUC04G064860 vs. ExPASy TrEMBL
Match: A0A1S3CMI9 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 187/203 (92.12%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60
           MQS  PAILPISNPQS  QP +PLSSF++HLLLSLRHAFSRRRPWPELLDRSAFSKPESL
Sbjct: 1   MQSPSPAILPISNPQS--QPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60

Query: 61  SEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120
           +EATLRIRKNYSYFRVNYF IIALILAISLFSNPSSLFLLIALL SWIFLYLFRPSDQPL
Sbjct: 61  TEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPL 120

Query: 121 VLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180
           VLFGRLFRDSEILIGL+VFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE
Sbjct: 121 VLFGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180

Query: 181 QEVNSSGFLGIFAGATSSSSSAA 204
           QEVNS+GFLGIFAG  SSSS+AA
Sbjct: 181 QEVNSTGFLGIFAGPPSSSSAAA 201

[Close]

BLAST of CcUC04G064860 vs. ExPASy TrEMBL
Match: A0A0A0KXP8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.2e-89
Identity = 189/214 (88.32%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MQSS-YPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPES 60
           MQSS  P ILPISNPQS  QPQ+PLSSF++HLLLSLRHAFSRRRPWPELLDRSAFSKPES
Sbjct: 1   MQSSASPVILPISNPQS--QPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPES 60

Query: 61  LSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQP 120
           LSEATLRIRKNYSYFRVNYF IIALILAISLFSNPSSLFLLIALL SWIFLYLFRPSDQP
Sbjct: 61  LSEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQP 120

Query: 121 LVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLD 180
           LVLFGR FRDSEILIGLVVFTACVVF TSVGSVLVSA TAG AVVCAHGALRSPDDLFLD
Sbjct: 121 LVLFGRHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLD 180

Query: 181 EQEVNSSGFLGIFAGA---TSSSSSAAAVAPSGK 211
           EQEVN++GFLGIFAGA   +SSSSS++  APSG+
Sbjct: 181 EQEVNTTGFLGIFAGAPSSSSSSSSSSGAAPSGR 212

[Close]

BLAST of CcUC04G064860 vs. ExPASy TrEMBL
Match: A0A6J1IPN2 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.4e-89
Identity = 183/209 (87.56%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60
           M SS PAILP+SN  S+ QPQ+PLSSFA+HL LSLRHAFSRRRPWPELLDRSAFSKPESL
Sbjct: 1   MPSSSPAILPVSN--SESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESL 60

Query: 61  SEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120
           SEATLRIRKNY+YFRVNYFAIIALILA S FSNPSSLFLLIALLSSWIFLYLFRPSDQPL
Sbjct: 61  SEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120

Query: 121 VLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180
           VLFGRLFRDSEILIGLVVFTAC++F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDE
Sbjct: 121 VLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDE 180

Query: 181 QEVNSSGFLGIFAGATSSSSSAAAVAPSG 210
           QEVNS+GFLG+FAGA    S+AAA APSG
Sbjct: 181 QEVNSTGFLGLFAGA---PSAAAATAPSG 204

[Close]

BLAST of CcUC04G064860 vs. ExPASy TrEMBL
Match: A0A6J1GD57 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 183/209 (87.56%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPLSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESL 60
           M SS PAILP+SN  S+ QPQ+PLSSFA+HL LSLRHAFSRRRPWPELLDRSAFSKPESL
Sbjct: 1   MPSSSPAILPVSN--SESQPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAFSKPESL 60

Query: 61  SEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120
           SEATLRIRKNY+YFRVNYFAIIALILA S FSNPSSLFLLIALLSSWIFLYLFRPSDQPL
Sbjct: 61  SEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFRPSDQPL 120

Query: 121 VLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDE 180
           VLFGRLFRDSEILIGLVVFTACV+F TSVGSVLVS+LTAG AVVCAHGALRSPDDLFLDE
Sbjct: 121 VLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPDDLFLDE 180

Query: 181 QEVNSSGFLGIFAGATSSSSSAAAVAPSG 210
           QEVNS+GFLG+FAGA S+++SA   APSG
Sbjct: 181 QEVNSTGFLGLFAGAPSAAASA---APSG 204

[Close]

BLAST of CcUC04G064860 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 217.6 bits (553), Expect = 9.4e-57
Identity = 119/209 (56.94%), Postives = 158/209 (75.60%), Query Frame = 0


Query: 3   SSYPAILPISNPQSQPQPQVPLSS-----FANHLLLSLRHAFSRRRPWPELLDRSAFSKP 62
           SS PAILP++N Q+  Q Q P++S     F + L  SLR + S+RRPW EL+DRS+F++P
Sbjct: 2   SSSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARP 61

Query: 63  ESLSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSD 122
           +SL+++  RIRKN +YF+VNY AI++L+LA SL S+P SL +L++LL SW+FLYLFR SD
Sbjct: 62  DSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSD 121

Query: 123 QPLVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLF 182
           QPLVLFGR F D E L+GLV+ T  VVF TSVGS+L SALT G+A+VC HGA R PDDLF
Sbjct: 122 QPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLF 181

Query: 183 LDEQEVNSSGFLGIFAGATSSSSSAAAVA 207
           LDEQE  ++G L     + ++S++A+ VA
Sbjct: 182 LDEQEPANAGLLSFIGNSAATSAAASVVA 210

[Close]

BLAST of CcUC04G064860 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 )

HSP 1 Score: 212.6 bits (540), Expect = 3.0e-55
Identity = 116/218 (53.21%), Postives = 154/218 (70.64%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQP-------QPQVPLS-----SFANHLLLSLRHAFSRRRPWPEL 60
           M SS P +LPISNPQ+ P       + Q P++     +F N +  ++++  S+RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNYSYF+VNY  +   I+  SL ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  V+F T VGSVLVSA+  GVA++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSSGFLGIFAGATSSSSSAAAVA 207
           A R+P+DLFLDEQE  ++GFL    GA SS++ A   A
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPAVIAA 218

[Close]

BLAST of CcUC04G064860 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 117/205 (57.07%), Postives = 148/205 (72.20%), Query Frame = 0


Query: 6   PAILPISNP---QSQPQPQVP-LSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESLS 65
           P  LP++N    QSQP    P   +F + L  S+R   S+RRPW EL+DRS+ ++PESL+
Sbjct: 4   PPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLT 63

Query: 66  EATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPLV 125
           +A  RIRKN +YF+VNY AI++L+LA SLFS+P SL +LI LL  W+FLYLFRPSDQPLV
Sbjct: 64  DALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLV 123

Query: 126 LFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQ 185
           +FGR F D E L+ LV+ T  VVF TSVGS+L SAL  GVA+VC HGA   PDDLFLDEQ
Sbjct: 124 VFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQ 183

Query: 186 EVNSSGFLGIFAGATSSSSSAAAVA 207
           E  ++G L    G  S++S+AAAV+
Sbjct: 184 EPANAGLLSFLGG--SATSAAAAVS 206

[Close]

BLAST of CcUC04G064860 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 117/205 (57.07%), Postives = 148/205 (72.20%), Query Frame = 0


Query: 6   PAILPISNP---QSQPQPQVP-LSSFANHLLLSLRHAFSRRRPWPELLDRSAFSKPESLS 65
           P  LP++N    QSQP    P   +F + L  S+R   S+RRPW EL+DRS+ ++PESL+
Sbjct: 4   PPTLPVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLT 63

Query: 66  EATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPLV 125
           +A  RIRKN +YF+VNY AI++L+LA SLFS+P SL +LI LL  W+FLYLFRPSDQPLV
Sbjct: 64  DALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLV 123

Query: 126 LFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPDDLFLDEQ 185
           +FGR F D E L+ LV+ T  VVF TSVGS+L SAL  GVA+VC HGA   PDDLFLDEQ
Sbjct: 124 VFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQ 183

Query: 186 EVNSSGFLGIFAGATSSSSSAAAVA 207
           E  ++G L    G  S++S+AAAV+
Sbjct: 184 EPANAGLLSFLGG--SATSAAAAVS 206

[Close]

BLAST of CcUC04G064860 vs. TAIR 10
Match: AT5G01640.1 (prenylated RAB acceptor 1.B5 )

HSP 1 Score: 199.5 bits (506), Expect = 2.6e-51
Identity = 116/222 (52.25%), Postives = 151/222 (68.02%), Query Frame = 0


Query: 1   MQSSYPAILPISNPQSQPQPQVPL------------SSFANHLLLSLRHAFSRRRPWPEL 60
           M S+ P +LPIS   +    Q P+             +F N +  ++    SR RPW EL
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYSYFRVNYFAIIALILAISLFSNPSSLFLLIALLSSWI 120
           LDRSAF+KP+SLSEA  R RKN SYFRVNY  I+ALIL  SL ++P SL LL+ L +SW+
Sbjct: 61  LDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVVFFTSVGSVLVSALTAGVAVVCAHG 180
           FLYLFRPSD+PL+LFGR F + E L GL++ T  V+FFTSVGSVL+SAL  G+A +C HG
Sbjct: 121 FLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHG 180

Query: 181 ALRSPDDLFLDEQEVNSSGFL---GIFAGATSSSSSAAAVAP 208
           A R+PDDLFLDEQ+  +SGFL   G+ A  + + S+++A +P
Sbjct: 181 AFRAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASP 222

The following BLAST results are available for this feature:

BLAST of CcUC04G064860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464234.1	9.3e-91	92.12	PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family prote...	[more]
KAE8649576.1	6.7e-89	88.15	hypothetical protein Csa_021551 [Cucumis sativus]	[more]
XP_004148598.2	6.7e-89	88.32	PRA1 family protein B2 [Cucumis sativus]	[more]
XP_022978285.1	1.9e-88	87.56	PRA1 family protein B2-like [Cucurbita maxima]	[more]
XP_022949813.1	2.5e-88	87.56	PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family prote...	[more]

BLAST of CcUC04G064860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIY7	1.3e-55	56.94	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
O80915	4.2e-54	53.21	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
Q9LYN0	1.5e-51	57.07	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
Q9M012	3.7e-50	52.25	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]
Q9FLB6	5.9e-48	53.11	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]

BLAST of CcUC04G064860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIC6	4.5e-91	92.12	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G...	[more]
A0A1S3CMI9	4.5e-91	92.12	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1	[more]
A0A0A0KXP8	3.2e-89	88.32	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1	[more]
A0A6J1IPN2	9.4e-89	87.56	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1	[more]
A0A6J1GD57	1.2e-88	87.56	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1	[more]

BLAST of CcUC04G064860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40380.1	9.4e-57	56.94	prenylated RAB acceptor 1.B2	[more]
AT2G38360.1	3.0e-55	53.21	prenylated RAB acceptor 1.B4	[more]
AT3G56110.1	1.1e-52	57.07	prenylated RAB acceptor 1.B1	[more]
AT3G56110.2	1.1e-52	57.07	prenylated RAB acceptor 1.B1	[more]
AT5G01640.1	2.6e-51	52.25	prenylated RAB acceptor 1.B5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 38..181 e-value: 2.6E-47 score: 160.1
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR19317:SF34	PRA1 FAMILY PROTEIN-RELATED	coord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G064860.1	CcUC04G064860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane