CcUC04G064460 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G064460
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionHigh mobility group B protein 6
LocationCicolChr04: 20999666 .. 21000764 (+)
RNA-Seq ExpressionCcUC04G064460
SyntenyCcUC04G064460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATTATTAAATAAAGTAGCCGTTGCCGCCTGTATGCTTTCAAATTCAAACCCTAAAAACACAAAAATCCAAATCCTTCAGAACCCCCTTTTCTCCCATTCTTCATTCTCTTTTTTCTATGATTCCATTTCTTCTCTTTCAAACCAATTCTCCATCTCCATCGATATGCAGACTCTCCACCATCCCTTAGCCTCTCCTCAAGATCTTCCTCTCAAGTCCGGCCGTCGCCCACTCCAGCCGAAGAATTCTCTCCCAAATCCTCTTCCTTCCGTCGCCAAAATCATCAAATCCAAGCCGGAAAGGATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAACAATCCGCCGATTCGCCCAGCGGCAACTGCCACAACGGCGAGTATTGAGTCTTGTGATTTGTCTCTGGCGGATGAACTTAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGGTGAACGAACGGAGCAGATGTTGAGAGAGAGGGATTTGGTCTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAAGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTTAGATCGTACTGTATGGTAAATGACTAAACGTTCTGTTTTGCGAGTTTAAAGTTTCGATTCGATTTGTTGTTCGTTCGCTGATTTTTGATGATTTGAATCAGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGTAAGTTCCGATCTCAAATTTCGAAGCTATTTCTCTATTTTCAGAAACTCTGGGTTCATCCGCTTCAATGATTGTTTCAGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGGTTTTTGAAATCGTTTAAGTTTTGTTCGCCGCTTTCAATTTGCCCTAATTTTCCCATCACTACTACTTCAGAAAAAGAAATCGATGTAATACCTCATTATGATCTTCTTTATGCAATGAACGAAATTTCTGAGTTGTACTCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGA

mRNA sequence

GTTATTATTAAATAAAGTAGCCGTTGCCGCCTGTATGCTTTCAAATTCAAACCCTAAAAACACAAAAATCCAAATCCTTCAGAACCCCCTTTTCTCCCATTCTTCATTCTCTTTTTTCTATGATTCCATTTCTTCTCTTTCAAACCAATTCTCCATCTCCATCGATATGCAGACTCTCCACCATCCCTTAGCCTCTCCTCAAGATCTTCCTCTCAAGTCCGGCCGTCGCCCACTCCAGCCGAAGAATTCTCTCCCAAATCCTCTTCCTTCCGTCGCCAAAATCATCAAATCCAAGCCGGAAAGGATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAACAATCCGCCGATTCGCCCAGCGGCAACTGCCACAACGGCGAGTATTGAGTCTTGTGATTTGTCTCTGGCGGATGAACTTAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGGTGAACGAACGGAGCAGATGTTGAGAGAGAGGGATTTGGTCTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAAGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTTAGATCGTACTGTATGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGAAAAAGAAATCGATGTAATACCTCATTATGATCTTCTTTATGCAATGAACGAAATTTCTGAGTTGTACTCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGA

Coding sequence (CDS)

ATGCAGACTCTCCACCATCCCTTAGCCTCTCCTCAAGATCTTCCTCTCAAGTCCGGCCGTCGCCCACTCCAGCCGAAGAATTCTCTCCCAAATCCTCTTCCTTCCGTCGCCAAAATCATCAAATCCAAGCCGGAAAGGATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAACAATCCGCCGATTCGCCCAGCGGCAACTGCCACAACGGCGAGTATTGAGTCTTGTGATTTGTCTCTGGCGGATGAACTTAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGGTGAACGAACGGAGCAGATGTTGAGAGAGAGGGATTTGGTCTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAAGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTTAGATCGTACTGTATGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGAAAAAGAAATCGATGTAATACCTCATTATGATCTTCTTTATGCAATGAACGAAATTTCTGAGTTGTACTCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGA

Protein sequence

MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENNPPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSAEFVTEKEIDVIPHYDLLYAMNEISELYSISFSIFFTSINA
Homology
BLAST of CcUC04G064460 vs. NCBI nr
Match: XP_038883293.1 (uncharacterized protein LOC120074285 [Benincasa hispida])

HSP 1 Score: 340.1 bits (871), Expect = 1.5e-89
Identity = 184/195 (94.36%), Postives = 186/195 (95.38%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPLA+PQDLPLKSGRRPLQPKNSLPN  PSVAK IKSKPERIQISLSGDANKEN+
Sbjct: 1   MQTLHHPLATPQDLPLKSGRRPLQPKNSLPNSGPSVAKFIKSKPERIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PPI   AT TTASIESCD SLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL
Sbjct: 61  PPIHATATTTTASIESCDSSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDSA FVT
Sbjct: 181 SVGENSSLDSAGFVT 195

BLAST of CcUC04G064460 vs. NCBI nr
Match: KAA0025412.1 (high mobility group B protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 6.9e-87
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPL SP+D+PLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PP      ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189

BLAST of CcUC04G064460 vs. NCBI nr
Match: XP_004142680.1 (high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical protein Csa_012022 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 5.8e-86
Identity = 178/195 (91.28%), Postives = 184/195 (94.36%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPL  P+DLPLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1   MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PP       TT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189

BLAST of CcUC04G064460 vs. NCBI nr
Match: XP_008463266.1 (PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobility group B protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 327.4 bits (838), Expect = 9.9e-86
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPL SP+D+PLKSGRRPLQPKNSLPN +PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PP      ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189

BLAST of CcUC04G064460 vs. NCBI nr
Match: XP_022978293.1 (high mobility group B protein 13-like [Cucurbita maxima])

HSP 1 Score: 311.6 bits (797), Expect = 5.6e-81
Identity = 167/195 (85.64%), Postives = 180/195 (92.31%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQ LH PLA+P DLPLKSGRRPLQPKNSLPNP+P+VAK+IKSKPERIQISL  DANKEN+
Sbjct: 1   MQALHQPLATPHDLPLKSGRRPLQPKNSLPNPVPAVAKVIKSKPERIQISLPTDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PPI     A  AS+ESCDLSLADELNAVKRKLERLRL+ ERTEQML+ERD++LELRMKEL
Sbjct: 61  PPIH----AKAASVESCDLSLADELNAVKRKLERLRLERERTEQMLKERDMILELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEE
Sbjct: 121 LQRSKEQRDLEMEVDRLFRLKELRLYCMRISPIRSLREKEREKIFADAQFPEYEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 191

BLAST of CcUC04G064460 vs. ExPASy TrEMBL
Match: A0A5A7SJQ2 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00510 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.3e-87
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPL SP+D+PLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PP      ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189

BLAST of CcUC04G064460 vs. ExPASy TrEMBL
Match: A0A0A0L063 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.8e-86
Identity = 178/195 (91.28%), Postives = 184/195 (94.36%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPL  P+DLPLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1   MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PP       TT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189

BLAST of CcUC04G064460 vs. ExPASy TrEMBL
Match: A0A5D3CEI7 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00430 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.8e-86
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPL SP+D+PLKSGRRPLQPKNSLPN +PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PP      ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189

BLAST of CcUC04G064460 vs. ExPASy TrEMBL
Match: A0A1S3CJ78 (high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.8e-86
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQTLHHPL SP+D+PLKSGRRPLQPKNSLPN +PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1   MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PP      ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61  PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189

BLAST of CcUC04G064460 vs. ExPASy TrEMBL
Match: A0A6J1ISM0 (high mobility group B protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC111478322 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.7e-81
Identity = 167/195 (85.64%), Postives = 180/195 (92.31%), Query Frame = 0

Query: 1   MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
           MQ LH PLA+P DLPLKSGRRPLQPKNSLPNP+P+VAK+IKSKPERIQISL  DANKEN+
Sbjct: 1   MQALHQPLATPHDLPLKSGRRPLQPKNSLPNPVPAVAKVIKSKPERIQISLPTDANKENH 60

Query: 61  PPIRPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
           PPI     A  AS+ESCDLSLADELNAVKRKLERLRL+ ERTEQML+ERD++LELRMKEL
Sbjct: 61  PPIH----AKAASVESCDLSLADELNAVKRKLERLRLERERTEQMLKERDMILELRMKEL 120

Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
           LQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEE
Sbjct: 121 LQRSKEQRDLEMEVDRLFRLKELRLYCMRISPIRSLREKEREKIFADAQFPEYEIGDGEE 180

Query: 181 SVGENSSLDSAEFVT 196
           SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 191

BLAST of CcUC04G064460 vs. TAIR 10
Match: AT5G01910.1 (unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-22
Identity = 73/181 (40.33%), Postives = 102/181 (56.35%), Query Frame = 0

Query: 18  SGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENNPPIRPAATATTASIESC 77
           SGR+ LQP+N    P      +     E+++ +L+ +                     S 
Sbjct: 4   SGRKALQPRNIYQTPKEDAFFVKPKAAEKLKENLNLET--------------------SI 63

Query: 78  DLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRL 137
           D SLA+EL+A K+KLERLR D E TE++L+ERD  ++L M  LLQR + Q+ LE++VDRL
Sbjct: 64  DASLAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRL 123

Query: 138 FRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSAEFVTEK 197
           FRLKEL +Y  +ISPIRSLR KE+++      F       GEE   E SS++ A    E+
Sbjct: 124 FRLKELHAYSSKISPIRSLRAKEQQEKMRRFTFA------GEEQPDEESSVEIANGPIEE 158

Query: 198 E 199
           E
Sbjct: 184 E 158

BLAST of CcUC04G064460 vs. TAIR 10
Match: AT5G01910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20
Identity = 63/146 (43.15%), Postives = 89/146 (60.96%), Query Frame = 0

Query: 18  SGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENNPPIRPAATATTASIESC 77
           SGR+ LQP+N    P      +     E+++ +L+ +                     S 
Sbjct: 4   SGRKALQPRNIYQTPKEDAFFVKPKAAEKLKENLNLET--------------------SI 63

Query: 78  DLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRL 137
           D SLA+EL+A K+KLERLR D E TE++L+ERD  ++L M  LLQR + Q+ LE++VDRL
Sbjct: 64  DASLAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRL 123

Query: 138 FRLKELRSYCMRISPIRSLREKEREK 164
           FRLKEL +Y  +ISPIRSLR KE+++
Sbjct: 124 FRLKELHAYSSKISPIRSLRAKEQQE 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038883293.11.5e-8994.36uncharacterized protein LOC120074285 [Benincasa hispida][more]
KAA0025412.16.9e-8791.79high mobility group B protein 6 [Cucumis melo var. makuwa][more]
XP_004142680.15.8e-8691.28high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical prote... [more]
XP_008463266.19.9e-8691.28PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobil... [more]
XP_022978293.15.6e-8185.64high mobility group B protein 13-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SJQ23.3e-8791.79High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A0A0L0632.8e-8691.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1[more]
A0A5D3CEI74.8e-8691.28High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3CJ784.8e-8691.28high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=... [more]
A0A6J1ISM02.7e-8185.64high mobility group B protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC11147832... [more]
Match NameE-valueIdentityDescription
AT5G01910.13.7e-2240.33unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bac... [more]
AT5G01910.21.2e-2043.15unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..71
NoneNo IPR availablePANTHERPTHR36790MYELIN TRANSCRIPTION FACTORcoord: 1..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G064460.1CcUC04G064460.1mRNA