CcUC04G064330 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G064330
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionprotein RETICULATA-RELATED 3, chloroplastic
LocationCicolChr04: 20804331 .. 20805437 (+)
RNA-Seq ExpressionCcUC04G064330
SyntenyCcUC04G064330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTATGGCTCAGCTGCATTGTTCTGTTCGCCCTAGACATTACTGTAATATTCCAAATAATCATGCTTACAGCAACACACCGGCTTTCTCTTTTTTGTCTAATTCATCGGTTGTTGAATCGAGGAGTCCATCTCTTTCTCTTTTTAATGCGGATTTAACTAGGCCTAGTTTTCTTGCGAAATCTGAGCTTTCTCTGGCTGGAGGCGACGGTGGTAACGGCGTTGGCCATGGCGGAAGAGGTGGGGGAGGTGGTGGTGATGGTGGTTGGAGTGATGATCGAACTCATGGGGATGATGATAATTCATCAAGTTTTGGAGTGTTGGGATTGTTTCTTAAAGGGTGGAGATCTAGAGTTGCTGCAGATCCACAGTTTCCTTTCAAGGTTCTGATGGAAGAATTGGTTGGTGTGAGTTCTTGTGTTCTTGGAGACATGGCGTCCCGTCCCAACTTCGGTCTCAACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTTGGATCGATACTGAATTTCACTCTCATGTATCTATTGGCTCCCACTGCAGCAGCTGGTGCAGCAGCCAAGCAGCTACCTGCAATCTTTGCGAGTTGCCCAACTAGTCATATGTTCGAACCCGGTGCATTCACAATCTTAGATCGATTGGGAACCTTTCTTTACAAGGGAACCGTCTTTGCCGCAGTTGGACTAGCCGCCGGGATCGTCGGGACTGCACTCTCAAATGGCTTGATTAAGCTAAGGAAGAAGATGGATCCCGGATTCGAGACACCGAACAAGGCGCCTCCTACATTGTTGAATGCCATGACTTGGGCCATTCACATGGGGGTCAGTAGTAACTTGAGATATCAAACTTTGAATGGGGTTGAATATGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTCTGAACAACATTCTTGGGGGCATGTCGTTTGTCGTCCTCGCACGGTTGACAGGTTCGCAAAGCGTCGAGGGGCCGAAGCCAGCAGCAGTGGAGTTGGATTCTGGTGATGAGAAAGAGAAGCTGTTGGAGGGAGATAAAGAAGAGGAGTTAAGGAGCAACCAGGCAGCTTGCAAGTGA

mRNA sequence

ATGGCGGCTATGGCTCAGCTGCATTGTTCTGTTCGCCCTAGACATTACTGTAATATTCCAAATAATCATGCTTACAGCAACACACCGGCTTTCTCTTTTTTGTCTAATTCATCGGTTGTTGAATCGAGGAGTCCATCTCTTTCTCTTTTTAATGCGGATTTAACTAGGCCTAGTTTTCTTGCGAAATCTGAGCTTTCTCTGGCTGGAGGCGACGGTGGTAACGGCGTTGGCCATGGCGGAAGAGGTGGGGGAGGTGGTGGTGATGGTGGTTGGAGTGATGATCGAACTCATGGGGATGATGATAATTCATCAAGTTTTGGAGTGTTGGGATTGTTTCTTAAAGGGTGGAGATCTAGAGTTGCTGCAGATCCACAGTTTCCTTTCAAGGTTCTGATGGAAGAATTGGTTGGTGTGAGTTCTTGTGTTCTTGGAGACATGGCGTCCCGTCCCAACTTCGGTCTCAACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTTGGATCGATACTGAATTTCACTCTCATGTATCTATTGGCTCCCACTGCAGCAGCTGGTGCAGCAGCCAAGCAGCTACCTGCAATCTTTGCGAGTTGCCCAACTAGTCATATGTTCGAACCCGGTGCATTCACAATCTTAGATCGATTGGGAACCTTTCTTTACAAGGGAACCGTCTTTGCCGCAGTTGGACTAGCCGCCGGGATCGTCGGGACTGCACTCTCAAATGGCTTGATTAAGCTAAGGAAGAAGATGGATCCCGGATTCGAGACACCGAACAAGGCGCCTCCTACATTGTTGAATGCCATGACTTGGGCCATTCACATGGGGGTCAGTAGTAACTTGAGATATCAAACTTTGAATGGGGTTGAATATGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTCTGAACAACATTCTTGGGGGCATGTCGTTTGTCGTCCTCGCACGGTTGACAGGTTCGCAAAGCGTCGAGGGGCCGAAGCCAGCAGCAGTGGAGTTGGATTCTGGTGATGAGAAAGAGAAGCTGTTGGAGGGAGATAAAGAAGAGGAGTTAAGGAGCAACCAGGCAGCTTGCAAGTGA

Coding sequence (CDS)

ATGGCGGCTATGGCTCAGCTGCATTGTTCTGTTCGCCCTAGACATTACTGTAATATTCCAAATAATCATGCTTACAGCAACACACCGGCTTTCTCTTTTTTGTCTAATTCATCGGTTGTTGAATCGAGGAGTCCATCTCTTTCTCTTTTTAATGCGGATTTAACTAGGCCTAGTTTTCTTGCGAAATCTGAGCTTTCTCTGGCTGGAGGCGACGGTGGTAACGGCGTTGGCCATGGCGGAAGAGGTGGGGGAGGTGGTGGTGATGGTGGTTGGAGTGATGATCGAACTCATGGGGATGATGATAATTCATCAAGTTTTGGAGTGTTGGGATTGTTTCTTAAAGGGTGGAGATCTAGAGTTGCTGCAGATCCACAGTTTCCTTTCAAGGTTCTGATGGAAGAATTGGTTGGTGTGAGTTCTTGTGTTCTTGGAGACATGGCGTCCCGTCCCAACTTCGGTCTCAACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTTGGATCGATACTGAATTTCACTCTCATGTATCTATTGGCTCCCACTGCAGCAGCTGGTGCAGCAGCCAAGCAGCTACCTGCAATCTTTGCGAGTTGCCCAACTAGTCATATGTTCGAACCCGGTGCATTCACAATCTTAGATCGATTGGGAACCTTTCTTTACAAGGGAACCGTCTTTGCCGCAGTTGGACTAGCCGCCGGGATCGTCGGGACTGCACTCTCAAATGGCTTGATTAAGCTAAGGAAGAAGATGGATCCCGGATTCGAGACACCGAACAAGGCGCCTCCTACATTGTTGAATGCCATGACTTGGGCCATTCACATGGGGGTCAGTAGTAACTTGAGATATCAAACTTTGAATGGGGTTGAATATGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTCTGAACAACATTCTTGGGGGCATGTCGTTTGTCGTCCTCGCACGGTTGACAGGTTCGCAAAGCGTCGAGGGGCCGAAGCCAGCAGCAGTGGAGTTGGATTCTGGTGATGAGAAAGAGAAGCTGTTGGAGGGAGATAAAGAAGAGGAGTTAAGGAGCAACCAGGCAGCTTGCAAGTGA

Protein sequence

MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPSFLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEELRSNQAACK
Homology
BLAST of CcUC04G064330 vs. NCBI nr
Match: XP_038883563.1 (protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 675.6 bits (1742), Expect = 2.4e-190
Identity = 348/368 (94.57%), Postives = 361/368 (98.10%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPSFL 60
           MAAMAQLHCSVRPRH+ N+PNN AY++TPAFSFLSNSSVVESRS SLS FNADLTRPSFL
Sbjct: 1   MAAMAQLHCSVRPRHHYNVPNNPAYNSTPAFSFLSNSSVVESRSRSLSFFNADLTRPSFL 60

Query: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRV 120
           AKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD++SSSFGVLGLFLKGWRSRV
Sbjct: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDNDSSSFGVLGLFLKGWRSRV 120

Query: 121 AADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTALS 240
           TAAAGAAAKQLPAIFASCPTSHMFEPGAFT+LDRLGTF+YKGTVFAAVGLAAG+VGTALS
Sbjct: 181 TAAAGAAAKQLPAIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLA 300
           NGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVE++LAKGLPPLA
Sbjct: 241 NGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEFLLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEEL 360
           FKSSVVVLRCLNN+LGGMSFVVLARLTGSQSVEGPKPA +ELDSGDEKEKLLEGDKEEEL
Sbjct: 301 FKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAVMELDSGDEKEKLLEGDKEEEL 360

Query: 361 RSNQAACK 369
           R NQ ACK
Sbjct: 361 RGNQTACK 368

BLAST of CcUC04G064330 vs. NCBI nr
Match: XP_008463291.1 (PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >XP_016903009.1 PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >TYK06219.1 protein RETICULATA-RELATED 3 [Cucumis melo var. makuwa])

HSP 1 Score: 667.2 bits (1720), Expect = 8.4e-188
Identity = 347/370 (93.78%), Postives = 358/370 (96.76%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y N+PNNH ++NTPAFSFLSNSSVVESRS   SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVGHGG+GGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTA 240
           APTAAAGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTF+YKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNN+LGGMSFVVLARLTGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

BLAST of CcUC04G064330 vs. NCBI nr
Match: XP_004142670.1 (protein RETICULATA-RELATED 3, chloroplastic [Cucumis sativus] >KGN54469.1 hypothetical protein Csa_012048 [Cucumis sativus])

HSP 1 Score: 664.5 bits (1713), Expect = 5.5e-187
Identity = 344/370 (92.97%), Postives = 358/370 (96.76%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y ++PNNH ++NTPAFSFLSNSS VESRS   SLSLFNADLTRPS
Sbjct: 1   MAAMAQLHCSVRPRQYYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTA 240
           APTAAAG AA++LP+IFASCPTSHMFEPGAFT+LDR+GTF+YKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNN+LGGMSFVVLAR+TGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

BLAST of CcUC04G064330 vs. NCBI nr
Match: XP_022156248.1 (protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia])

HSP 1 Score: 617.5 bits (1591), Expect = 7.6e-173
Identity = 322/362 (88.95%), Postives = 345/362 (95.30%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR+Y N+P NHAY+NTPAFSFLS+SSV++SR+ SLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSLA-GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
           AKSELSLA GGDGG+GVG GG GGGGG  GGWSDDR HGDDD SSSFGVLGLFLKGWRSR
Sbjct: 61  AKSELSLAGGGDGGDGVGRGGGGGGGGDSGGWSDDRAHGDDD-SSSFGVLGLFLKGWRSR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTAL 240
           PTAAAG AAKQLPAIF+SCPTSHMFEPGAFT+LDRLGTF+YKGTVFAAVGLAAG+VGTAL
Sbjct: 181 PTAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNA+TWAIHMGVSSNLRYQTLNGVE+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNN+LGG+SFV+LAR TGSQS+E PK AAVELDS DEKEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 361

BLAST of CcUC04G064330 vs. NCBI nr
Match: XP_022966374.1 (protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 600.5 bits (1547), Expect = 9.7e-168
Identity = 314/362 (86.74%), Postives = 338/362 (93.37%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPSFL 60
           MA+MAQLHCSVRPR+Y N+P++HAY+N PAFSFLSNSS VESRS SLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRNYYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGD-GGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
            KSELSLAGGDGGNGVG GG GGGGGGD GGWSDDR  GDD  SSSFGV GLFL+GWR+R
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDNGGWSDDRADGDD--SSSFGVFGLFLQGWRTR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTAL 240
           PTA+AG AAKQLPAIF SCPTSHMFEPGAFT+L+RLGT +YKGTVFA VGLAAG+VGTAL
Sbjct: 181 PTASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNG+E+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNNILGGMSFV+LAR+TGSQSVE  KPAA++LD+ D KEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNILGGMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 360

BLAST of CcUC04G064330 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.5e-102
Identity = 189/266 (71.05%), Postives = 224/266 (84.21%), Query Frame = 0

Query: 68  AGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRVAADPQFP 127
           AGG GG   G+ G G G GG GG          + SS +G +GLF++GWRSRVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 128 FKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAA 187
           FKVLMEE+VG+S+CVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTAA   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 188 AKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLR 247
           ++ LP IF +CP+SHMFE G+FT+++R GT +YKG VFA+VGLAAG+VGTA+SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 248 KKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVV 307
           KKMDP FETPNK PPT+LN++TWA HMGVS+N RYQTLNG+E++LAK LPPL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 308 LRCLNNILGGMSFVVLARLTGSQSVE 334
           LRC NN+ GGMSFV+LAR+TGSQSVE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVE 325

BLAST of CcUC04G064330 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.6e-101
Identity = 212/353 (60.06%), Postives = 260/353 (73.65%), Query Frame = 0

Query: 1   MAAM-AQLHCSVR-PRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPS 60
           MAAM A+LH S +  +    +P     S  P       + V+  R+ S+S  + + + P+
Sbjct: 1   MAAMAAKLHISTKSDQSNVRLPRLINLSRDP------TARVLFPRNGSVSSLHTNFSSPN 60

Query: 61  FLAKSELSLAGGDGGNGVG-HGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWR 120
            +    +  AGG GG  +G HGG  G GGG GG+       +++ SS +G LGLF++GWR
Sbjct: 61  IM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGG----SEEEESSPWGPLGLFIQGWR 120

Query: 121 SRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180
           SRVAAD QFPFKVLME LVGVS+ VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL
Sbjct: 121 SRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180

Query: 181 LAPTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGT 240
           LAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT +YKG VFA VGLAAG+VGT
Sbjct: 181 LAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVGLAAGLVGT 240

Query: 241 ALSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLP 300
           A+SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RYQTLNG E++L K LP
Sbjct: 241 AISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLP 300

Query: 301 PLAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEK 351
           PL FK+SV+ LR +NN+LGGMSFV LAR+TGSQSVE  K   +E+    EKEK
Sbjct: 301 PLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEMSEISEKEK 337

BLAST of CcUC04G064330 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.0e-23
Identity = 100/320 (31.25%), Postives = 152/320 (47.50%), Query Frame = 0

Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD---------------------------- 128
           G DG  G G GG GG G G+G   +++  G                              
Sbjct: 117 GSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNY 176

Query: 129 -----------DNSSSFGVLGLFLKGW---RSRVAADPQFPFKVLMEELVGVSSCVLGDM 188
                      D  SS G+LG  ++ W   R+R+ ADP F FK+  E ++      + ++
Sbjct: 177 GIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEV 236

Query: 189 ASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTAAAGAAAKQLPAIFASCP 248
             R      E +   + L+VG+++N  L+ +LA       P+A+ G   + + A + + P
Sbjct: 237 QKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA-YNALP 296

Query: 249 TSHMFE---PGA-FTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFE 308
           +S +FE   PG  F+   RL T+ YKG ++ AVG   GIVG  ++N ++  ++ ++   E
Sbjct: 297 SS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKS-E 356

Query: 309 TPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVVVLRC 331
                PP + +A  W + + VSSN RYQ +NG+E V+     AK  PP A   +V V R 
Sbjct: 357 ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGV-RL 416

BLAST of CcUC04G064330 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21
Identity = 101/324 (31.17%), Postives = 148/324 (45.68%), Query Frame = 0

Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD--------------------------DN 128
           GG+GGNG G GG G G G DG    D+    +                          + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSSFGVLGLFLKGW--------------------RSRVAADPQFPFKVLMEELVGVSSCV 188
           + S G+  LFL  +                    R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMD 308
           AS P+S +FE   PG  F++  R+ TF YKG ++ +VG   G++G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVV 331
              E     PP   +A  W + +G+SSN RYQ +NG+E V+     AK +P +A   +V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

BLAST of CcUC04G064330 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-20
Identity = 109/373 (29.22%), Postives = 162/373 (43.43%), Query Frame = 0

Query: 21  NNHAYSNTPAFSFLSNSS----VVESRSPSLSLFNADLTRPSFLAKSELSLAGGDGGNGV 80
           +N  + +  +F  LS+SS    V+ ++S S   FN  +     L+ S    +G  G +  
Sbjct: 20  SNLTWPHIASFPRLSSSSSFNGVISAKSIS---FNRRVPITPVLSAS----SGNGGSDNN 79

Query: 81  GHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLK---------------------- 140
           G G  GGGGGGDGG +D   HGD+D   +     L LK                      
Sbjct: 80  GGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESLPKDLAAAIEAGRI 139

Query: 141 ------------------------GWRSRVAADPQFPFKVLMEELVGVSSCVLGDMASRP 200
                                   G+R R+ AD  F  K+ ME  VG+ +    +   R 
Sbjct: 140 PGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRR 199

Query: 201 NFGLNELDFVFSTLVVGSILNFTLMYLLAPTAA----AGAAAKQLPAIFASCPTSHM--- 260
               NEL+ VF+ + +  I +F L+YL APT +        A  +   F +CP +     
Sbjct: 200 ENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVA 259

Query: 261 FEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFETPNKAPPT 320
               ++T+L RLG     G    AVG  + +VGTA++N  IK RK +D   E   +  P 
Sbjct: 260 LSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPI 319

Query: 321 LLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP------LAFKSSVVVLRCLNNILGG 331
           +  ++ + ++M VSSNLRYQ + GV  +  + L P      LA  +    +R  N  LG 
Sbjct: 320 VSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSALCFAVRTGNTFLGS 379

BLAST of CcUC04G064330 vs. ExPASy TrEMBL
Match: A0A1S3CIX7 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501484 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 4.1e-188
Identity = 347/370 (93.78%), Postives = 358/370 (96.76%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y N+PNNH ++NTPAFSFLSNSSVVESRS   SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVGHGG+GGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTA 240
           APTAAAGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTF+YKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNN+LGGMSFVVLARLTGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

BLAST of CcUC04G064330 vs. ExPASy TrEMBL
Match: A0A5D3C7A3 (Protein RETICULATA-RELATED 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00830 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 4.1e-188
Identity = 347/370 (93.78%), Postives = 358/370 (96.76%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y N+PNNH ++NTPAFSFLSNSSVVESRS   SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVGHGG+GGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTA 240
           APTAAAGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTF+YKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNN+LGGMSFVVLARLTGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

BLAST of CcUC04G064330 vs. ExPASy TrEMBL
Match: A0A0A0L080 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.6e-187
Identity = 344/370 (92.97%), Postives = 358/370 (96.76%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y ++PNNH ++NTPAFSFLSNSS VESRS   SLSLFNADLTRPS
Sbjct: 1   MAAMAQLHCSVRPRQYYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTA 240
           APTAAAG AA++LP+IFASCPTSHMFEPGAFT+LDR+GTF+YKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNN+LGGMSFVVLAR+TGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

BLAST of CcUC04G064330 vs. ExPASy TrEMBL
Match: A0A6J1DQ40 (protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023180 PE=3 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 3.7e-173
Identity = 322/362 (88.95%), Postives = 345/362 (95.30%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR+Y N+P NHAY+NTPAFSFLS+SSV++SR+ SLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSLA-GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
           AKSELSLA GGDGG+GVG GG GGGGG  GGWSDDR HGDDD SSSFGVLGLFLKGWRSR
Sbjct: 61  AKSELSLAGGGDGGDGVGRGGGGGGGGDSGGWSDDRAHGDDD-SSSFGVLGLFLKGWRSR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTAL 240
           PTAAAG AAKQLPAIF+SCPTSHMFEPGAFT+LDRLGTF+YKGTVFAAVGLAAG+VGTAL
Sbjct: 181 PTAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNA+TWAIHMGVSSNLRYQTLNGVE+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNN+LGG+SFV+LAR TGSQS+E PK AAVELDS DEKEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 361

BLAST of CcUC04G064330 vs. ExPASy TrEMBL
Match: A0A6J1HTL4 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466041 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.7e-168
Identity = 314/362 (86.74%), Postives = 338/362 (93.37%), Query Frame = 0

Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPSFL 60
           MA+MAQLHCSVRPR+Y N+P++HAY+N PAFSFLSNSS VESRS SLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRNYYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGD-GGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
            KSELSLAGGDGGNGVG GG GGGGGGD GGWSDDR  GDD  SSSFGV GLFL+GWR+R
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDNGGWSDDRADGDD--SSSFGVFGLFLQGWRTR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTAL 240
           PTA+AG AAKQLPAIF SCPTSHMFEPGAFT+L+RLGT +YKGTVFA VGLAAG+VGTAL
Sbjct: 181 PTASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNG+E+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNNILGGMSFV+LAR+TGSQSVE  KPAA++LD+ D KEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNILGGMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 360

BLAST of CcUC04G064330 vs. TAIR 10
Match: AT3G08640.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 374.4 bits (960), Expect = 1.0e-103
Identity = 189/266 (71.05%), Postives = 224/266 (84.21%), Query Frame = 0

Query: 68  AGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRVAADPQFP 127
           AGG GG   G+ G G G GG GG          + SS +G +GLF++GWRSRVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 128 FKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAA 187
           FKVLMEE+VG+S+CVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTAA   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 188 AKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLR 247
           ++ LP IF +CP+SHMFE G+FT+++R GT +YKG VFA+VGLAAG+VGTA+SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 248 KKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVV 307
           KKMDP FETPNK PPT+LN++TWA HMGVS+N RYQTLNG+E++LAK LPPL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 308 LRCLNNILGGMSFVVLARLTGSQSVE 334
           LRC NN+ GGMSFV+LAR+TGSQSVE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVE 325

BLAST of CcUC04G064330 vs. TAIR 10
Match: AT3G08630.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 369.8 bits (948), Expect = 2.6e-102
Identity = 212/353 (60.06%), Postives = 260/353 (73.65%), Query Frame = 0

Query: 1   MAAM-AQLHCSVR-PRHYCNIPNNHAYSNTPAFSFLSNSSVVESRSPSLSLFNADLTRPS 60
           MAAM A+LH S +  +    +P     S  P       + V+  R+ S+S  + + + P+
Sbjct: 1   MAAMAAKLHISTKSDQSNVRLPRLINLSRDP------TARVLFPRNGSVSSLHTNFSSPN 60

Query: 61  FLAKSELSLAGGDGGNGVG-HGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWR 120
            +    +  AGG GG  +G HGG  G GGG GG+       +++ SS +G LGLF++GWR
Sbjct: 61  IM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGG----SEEEESSPWGPLGLFIQGWR 120

Query: 121 SRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180
           SRVAAD QFPFKVLME LVGVS+ VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL
Sbjct: 121 SRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180

Query: 181 LAPTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGT 240
           LAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT +YKG VFA VGLAAG+VGT
Sbjct: 181 LAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVGLAAGLVGT 240

Query: 241 ALSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLP 300
           A+SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RYQTLNG E++L K LP
Sbjct: 241 AISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLP 300

Query: 301 PLAFKSSVVVLRCLNNILGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEK 351
           PL FK+SV+ LR +NN+LGGMSFV LAR+TGSQSVE  K   +E+    EKEK
Sbjct: 301 PLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEMSEISEKEK 337

BLAST of CcUC04G064330 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-24
Identity = 100/320 (31.25%), Postives = 152/320 (47.50%), Query Frame = 0

Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD---------------------------- 128
           G DG  G G GG GG G G+G   +++  G                              
Sbjct: 117 GSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNY 176

Query: 129 -----------DNSSSFGVLGLFLKGW---RSRVAADPQFPFKVLMEELVGVSSCVLGDM 188
                      D  SS G+LG  ++ W   R+R+ ADP F FK+  E ++      + ++
Sbjct: 177 GIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEV 236

Query: 189 ASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTAAAGAAAKQLPAIFASCP 248
             R      E +   + L+VG+++N  L+ +LA       P+A+ G   + + A + + P
Sbjct: 237 QKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA-YNALP 296

Query: 249 TSHMFE---PGA-FTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFE 308
           +S +FE   PG  F+   RL T+ YKG ++ AVG   GIVG  ++N ++  ++ ++   E
Sbjct: 297 SS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKS-E 356

Query: 309 TPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVVVLRC 331
                PP + +A  W + + VSSN RYQ +NG+E V+     AK  PP A   +V V R 
Sbjct: 357 ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGV-RL 416

BLAST of CcUC04G064330 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-22
Identity = 101/324 (31.17%), Postives = 148/324 (45.68%), Query Frame = 0

Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD--------------------------DN 128
           GG+GGNG G GG G G G DG    D+    +                          + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSSFGVLGLFLKGW--------------------RSRVAADPQFPFKVLMEELVGVSSCV 188
           + S G+  LFL  +                    R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMD 308
           AS P+S +FE   PG  F++  R+ TF YKG ++ +VG   G++G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVV 331
              E     PP   +A  W + +G+SSN RYQ +NG+E V+     AK +P +A   +V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

BLAST of CcUC04G064330 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-21
Identity = 109/373 (29.22%), Postives = 162/373 (43.43%), Query Frame = 0

Query: 21  NNHAYSNTPAFSFLSNSS----VVESRSPSLSLFNADLTRPSFLAKSELSLAGGDGGNGV 80
           +N  + +  +F  LS+SS    V+ ++S S   FN  +     L+ S    +G  G +  
Sbjct: 20  SNLTWPHIASFPRLSSSSSFNGVISAKSIS---FNRRVPITPVLSAS----SGNGGSDNN 79

Query: 81  GHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLK---------------------- 140
           G G  GGGGGGDGG +D   HGD+D   +     L LK                      
Sbjct: 80  GGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESLPKDLAAAIEAGRI 139

Query: 141 ------------------------GWRSRVAADPQFPFKVLMEELVGVSSCVLGDMASRP 200
                                   G+R R+ AD  F  K+ ME  VG+ +    +   R 
Sbjct: 140 PGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRR 199

Query: 201 NFGLNELDFVFSTLVVGSILNFTLMYLLAPTAA----AGAAAKQLPAIFASCPTSHM--- 260
               NEL+ VF+ + +  I +F L+YL APT +        A  +   F +CP +     
Sbjct: 200 ENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVA 259

Query: 261 FEPGAFTILDRLGTFLYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFETPNKAPPT 320
               ++T+L RLG     G    AVG  + +VGTA++N  IK RK +D   E   +  P 
Sbjct: 260 LSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPI 319

Query: 321 LLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP------LAFKSSVVVLRCLNNILGG 331
           +  ++ + ++M VSSNLRYQ + GV  +  + L P      LA  +    +R  N  LG 
Sbjct: 320 VSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSALCFAVRTGNTFLGS 379

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038883563.12.4e-19094.57protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida][more]
XP_008463291.18.4e-18893.78PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >XP_016903... [more]
XP_004142670.15.5e-18792.97protein RETICULATA-RELATED 3, chloroplastic [Cucumis sativus] >KGN54469.1 hypoth... [more]
XP_022156248.17.6e-17388.95protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia][more]
XP_022966374.19.7e-16886.74protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9C9Z21.5e-10271.05Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q9C9Z33.6e-10160.06Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
B9DFK54.0e-2331.25Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=... [more]
Q9FGP91.7e-2131.17Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q94CJ51.4e-2029.22Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Match NameE-valueIdentityDescription
A0A1S3CIX74.1e-18893.78protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501... [more]
A0A5D3C7A34.1e-18893.78Protein RETICULATA-RELATED 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A0A0L0802.6e-18792.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1[more]
A0A6J1DQ403.7e-17388.95protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1HTL44.7e-16886.74protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
Match NameE-valueIdentityDescription
AT3G08640.11.0e-10371.05Protein of unknown function (DUF3411) [more]
AT3G08630.12.6e-10260.06Protein of unknown function (DUF3411) [more]
AT2G37860.32.8e-2431.25Protein of unknown function (DUF3411) [more]
AT5G22790.11.2e-2231.17reticulata-related 1 [more]
AT5G12470.11.0e-2129.22Protein of unknown function (DUF3411) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021825Protein RETICULATA-relatedPFAMPF11891RETICULATA-likecoord: 119..288
e-value: 1.7E-65
score: 220.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..99
NoneNo IPR availablePANTHERPTHR31620:SF17PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKEcoord: 1..346
NoneNo IPR availablePANTHERPTHR31620PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATEDcoord: 1..346

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G064330.1CcUC04G064330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0016021 integral component of membrane