CcUC04G064230 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G064230
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLEA_2 domain-containing protein
LocationCicolChr04: 20626682 .. 20627317 (+)
RNA-Seq ExpressionCcUC04G064230
SyntenyCcUC04G064230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCGCCGCCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATCATCATTTTGGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCCATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCCACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTATTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACGTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

mRNA sequence

ATGGAAATTGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCGCCGCCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATCATCATTTTGGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCCATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCCACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTATTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACGTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

Coding sequence (CDS)

ATGGAAATTGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCGCCGCCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATCATCATTTTGGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCCATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCCACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTATTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGTAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACGTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

Protein sequence

MEIASSSSVKDPKSTQSAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI
Homology
BLAST of CcUC04G064230 vs. NCBI nr
Match: XP_038882665.1 (uncharacterized protein LOC120073854 [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 1.9e-96
Identity = 196/211 (92.89%), Postives = 205/211 (97.16%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPIT 60
           MEIASSS+ KDPKSTQS AAARSRRRRNTCIG+SIA V+LLV+LI+ILAFTVFKAKRPIT
Sbjct: 1   MEIASSSN-KDPKSTQSIAAARSRRRRNTCIGISIATVVLLVVLIVILAFTVFKAKRPIT 60

Query: 61  AINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120
           AINSV LADLDVSLNLARV+V INVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA
Sbjct: 61  AINSVTLADLDVSLNLARVSVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120

Query: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PITAGRIDAGQRKEMNITLTIMADRLLKT+TVFSDVVAG+MPLNTYTRISGKVRILGIFN
Sbjct: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTTTVFSDVVAGTMPLNTYTRISGKVRILGIFN 180

Query: 181 IHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           IHVVSTTSCDFNV ISERK+GDQQCNYHTKI
Sbjct: 181 IHVVSTTSCDFNVSISERKVGDQQCNYHTKI 210

BLAST of CcUC04G064230 vs. NCBI nr
Match: XP_008463309.1 (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 192/216 (88.89%), Postives = 205/216 (94.91%), Query Frame = 0

Query: 1   MEIA--SSSSVKDPKSTQS---AAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKA 60
           MEIA  SSSS+KDPKSTQS   AAAARSR+RRNTCIG+SIAI+LLL+ILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITAINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGE 120
           KRPIT +NSVALADLDVSLNLARV+V INVTLIA +AITNPNKVGFSY NSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRI 180
           LVGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVFSDVVAGSMPLNTY RISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           LGIFNIHVVSTTSCDFNVDISERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of CcUC04G064230 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 189/215 (87.91%), Postives = 204/215 (94.88%), Query Frame = 0

Query: 1   MEIASSSS--VKDPKSTQS--AAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAK 60
           MEIASSSS  +KDPKSTQS  AAA RSR+RRNTCIG+SIAI+LLL+I+IIILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGEL 120
           RPIT +NSVALADLDVSLNLA V+V INVTLIAD+AITNPNKVGFSY NSTAFLNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           GIFNIHVVS+TSCDFNVDISERKIGDQQCNYHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of CcUC04G064230 vs. NCBI nr
Match: XP_023518218.1 (uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.9 bits (816), Expect = 3.2e-83
Identity = 171/211 (81.04%), Postives = 189/211 (89.57%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPIT 60
           MEIASSSS KDPKS       RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPIT
Sbjct: 16  MEIASSSSTKDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 75

Query: 61  AINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120
            INSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEA
Sbjct: 76  TINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 135

Query: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PI +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGSMPLNTYTRISGKVRILGIF 
Sbjct: 136 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFK 195

Query: 181 IHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           I VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 196 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 220

BLAST of CcUC04G064230 vs. NCBI nr
Match: XP_022966458.1 (uncharacterized protein LOC111466106 [Cucurbita maxima])

HSP 1 Score: 311.6 bits (797), Expect = 5.1e-81
Identity = 169/211 (80.09%), Postives = 189/211 (89.57%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPIT 60
           MEIASS++ KDPKS       RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPIT
Sbjct: 1   MEIASSTT-KDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 60

Query: 61  AINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120
            INSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEA
Sbjct: 61  TINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 120

Query: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PI +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGSMPLNTYTRISGKVRILGIF 
Sbjct: 121 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFK 180

Query: 181 IHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           I VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 181 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of CcUC04G064230 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.7e-94
Identity = 192/216 (88.89%), Postives = 205/216 (94.91%), Query Frame = 0

Query: 1   MEIA--SSSSVKDPKSTQS---AAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKA 60
           MEIA  SSSS+KDPKSTQS   AAAARSR+RRNTCIG+SIAI+LLL+ILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITAINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGE 120
           KRPIT +NSVALADLDVSLNLARV+V INVTLIA +AITNPNKVGFSY NSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRI 180
           LVGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVFSDVVAGSMPLNTY RISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           LGIFNIHVVSTTSCDFNVDISERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of CcUC04G064230 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.3e-93
Identity = 189/215 (87.91%), Postives = 204/215 (94.88%), Query Frame = 0

Query: 1   MEIASSSS--VKDPKSTQS--AAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAK 60
           MEIASSSS  +KDPKSTQS  AAA RSR+RRNTCIG+SIAI+LLL+I+IIILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGEL 120
           RPIT +NSVALADLDVSLNLA V+V INVTLIAD+AITNPNKVGFSY NSTAFLNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           GIFNIHVVS+TSCDFNVDISERKIGDQQCNYHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of CcUC04G064230 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.5e-81
Identity = 169/211 (80.09%), Postives = 189/211 (89.57%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPIT 60
           MEIASS++ KDPKS       RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPIT
Sbjct: 1   MEIASSTT-KDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 60

Query: 61  AINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120
            INSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEA
Sbjct: 61  TINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 120

Query: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PI +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGSMPLNTYTRISGKVRILGIF 
Sbjct: 121 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFK 180

Query: 181 IHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           I VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 181 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of CcUC04G064230 vs. ExPASy TrEMBL
Match: A0A6J1EAI5 (uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC111432307 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.3e-81
Identity = 169/211 (80.09%), Postives = 189/211 (89.57%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPIT 60
           MEIASS+  KDPKS       RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPIT
Sbjct: 16  MEIASST--KDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 75

Query: 61  AINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120
           AINSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEA
Sbjct: 76  AINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 135

Query: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PI +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGS+PLNTYTRISGKVRILGIF 
Sbjct: 136 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSIPLNTYTRISGKVRILGIFK 195

Query: 181 IHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
           I VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 196 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 218

BLAST of CcUC04G064230 vs. ExPASy TrEMBL
Match: A0A6J1DQ35 (uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023175 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.2e-81
Identity = 175/212 (82.55%), Postives = 190/212 (89.62%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPIT 60
           MEIASS++ KD KST   AAARSRRRRN CIG S+  +LLLVILI+ILAFTVFKA+RPIT
Sbjct: 1   MEIASSAT-KDLKST--TAAARSRRRRNICIGASLGALLLLVILILILAFTVFKARRPIT 60

Query: 61  AINSVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120
           AINSVALADL VSL++ARVAV INVTLIA VA+TNPNKVGFSYSNSTA LNYRGELVGEA
Sbjct: 61  AINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEA 120

Query: 121 PITAGRIDAGQRKEMNITLTIMADRLL-KTSTVFSDVVAGSMPLNTYTRISGKVRILGIF 180
           PI AGRIDA Q K+MNITLTIMADRLL K++ VFSDVVAGSMPLNTYTRISG+V+ILGIF
Sbjct: 121 PIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIF 180

Query: 181 NIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 212
            IHVVSTTSCD  +DIS RKIGDQQCNYHTKI
Sbjct: 181 KIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 209

BLAST of CcUC04G064230 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 185.7 bits (470), Expect = 4.0e-47
Identity = 97/208 (46.63%), Postives = 148/208 (71.15%), Query Frame = 0

Query: 6   SSSVKDPKSTQSAAAARSRRRRN--TCIGVSIAIVLLLVILIIILAFTVFKAKRPITAIN 65
           ++S  + +S  +  A + RR+RN   CI  +I ++LL+ I+I+ILAFT+FK KRP T I+
Sbjct: 28  NASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTID 87

Query: 66  SVALADLDVSLNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPIT 125
           SV +  L  S+N   + V +N+TL  D+++ NPN++GFSY +S+A LNYRG+++GEAP+ 
Sbjct: 88  SVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLP 147

Query: 126 AGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHV 185
           A RI A +   +NITLT+MADRLL  + + SDV+AG +PLNT+ +++GKV +L IF I V
Sbjct: 148 ANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKV 207

Query: 186 VSTTSCDFNVDISERKIGDQQCNYHTKI 212
            S++SCD ++ +S+R +  Q C Y TK+
Sbjct: 208 QSSSSCDLSISVSDRNVTSQHCKYSTKL 235

BLAST of CcUC04G064230 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 69/199 (34.67%), Postives = 110/199 (55.28%), Query Frame = 0

Query: 12  PKSTQSAAAARSRRRRNTCIGVSIAIV---LLLVILIIILAFTVFKAKRPITAINSVALA 71
           P S +SA+  ++  R    I  SI +    L+L  +++ L FTVF+ K PI  +N V + 
Sbjct: 17  PVSDESASNIKNTHRSRNRIKCSICVTATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVN 76

Query: 72  DLDVSLNLARV-AVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRI 131
            LD      +V  +  N+++I DV++ NPN   F YSN+T  + Y+G LVGEA    G+ 
Sbjct: 77  GLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKA 136

Query: 132 DAGQRKEMNITLTIMADRLLKTSTVFSDVV-AGSMPLNTYTRISGKVRILGIFNIHVVST 191
              +   MN+T+ IM DR+L    +  ++  +G + + +YTR+ GKV+I+GI   HV   
Sbjct: 137 RPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVK 196

Query: 192 TSCDFNVDISERKIGDQQC 206
            +C   V+I+ + I D  C
Sbjct: 197 MNCTMAVNITGQAIQDVDC 215

BLAST of CcUC04G064230 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-13
Identity = 50/188 (26.60%), Postives = 88/188 (46.81%), Query Frame = 0

Query: 25  RRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLARVAVHIN 84
           +RR  CI   I  VL ++ +  ++   VFK K PI    S  +  +  +++L    V +N
Sbjct: 3   KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLP-YEVQLN 62

Query: 85  VTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMAD 144
            TL  ++ + NPN   F Y      + YR  LVG   + +  + A     +   L +  D
Sbjct: 63  FTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLD 122

Query: 145 RLL-KTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQ 204
           + +     +  DV+ G + + T  ++ GK+ +LGIF I + S + C+  +      + DQ
Sbjct: 123 KFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQ 182

Query: 205 QCNYHTKI 212
            C+  TK+
Sbjct: 183 VCDLKTKL 189

BLAST of CcUC04G064230 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 53/150 (35.33%), Postives = 79/150 (52.67%), Query Frame = 0

Query: 19  AAARSRRR---RNTCIGVSIAIVLLLVILIIILA--FTVFKAKRPITAINSVALADLDVS 78
           A    RRR   R      ++A V LL++L+++L   FTVFK K P  ++N+V L    VS
Sbjct: 2   AKPHDRRRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVS 61

Query: 79  LNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRK 138
            N A      N +    VA+ NPN+  FS+ +S+  L Y G  VG   I AG+ID+G+ +
Sbjct: 62  NNTA------NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQ 121

Query: 139 EMNITLTIMADRLL-KTSTVFSDVVAGSMP 163
            M  T T+ +  +   +S+  S V A  +P
Sbjct: 122 YMAATFTVHSFPISPPSSSAISTVSAAVIP 145

BLAST of CcUC04G064230 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 44/199 (22.11%), Postives = 90/199 (45.23%), Query Frame = 0

Query: 17  SAAAARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDV---S 76
           S++++ S +    C+ +  A + LLV+ ++++     K K+P   +  VA+  + +   S
Sbjct: 30  SSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQQVAVVYMGISNPS 89

Query: 77  LNLARVAVHINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRK 136
             L      +++T+       NPNKVG  Y  S+  + Y+G  +G A +     DA   K
Sbjct: 90  AVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTK 149

Query: 137 EMNITLTIMADRLLKTSTVFSDVVAGS-----MPLNTYTRISGKVRILGIFNIHVVSTTS 196
             N+  TI  DR+       +D+V  +     + L     +  K+R++   +  V  + +
Sbjct: 150 --NVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVN 209

Query: 197 CDFNVDISERKIGDQQCNY 208
           C   +   ++ +  +QC +
Sbjct: 210 CGIGISPRKQALIYKQCGF 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882665.11.9e-9692.89uncharacterized protein LOC120073854 [Benincasa hispida][more]
XP_008463309.11.2e-9388.89PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo][more]
XP_004142665.11.7e-9287.91uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ... [more]
XP_023518218.13.2e-8381.04uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo][more]
XP_022966458.15.1e-8180.09uncharacterized protein LOC111466106 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CJB55.7e-9488.89uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=... [more]
A0A0A0L0948.3e-9387.91LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ... [more]
A0A6J1HS802.5e-8180.09uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106... [more]
A0A6J1EAI53.3e-8180.09uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
A0A6J1DQ357.2e-8182.55uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
AT3G54200.14.0e-4746.63Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.11.2e-2234.67Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.16.4e-1326.60Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.11.5e-0935.33Glycine-rich protein family [more]
AT2G01080.12.2e-0522.11Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 91..181
e-value: 3.8E-10
score: 40.2
NoneNo IPR availableGENE3D2.60.40.1820coord: 46..201
e-value: 1.3E-10
score: 43.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 20..210
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 20..210
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 84..149

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G064230.1CcUC04G064230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane