CcUC04G063760 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G063760
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptiondamaged DNA binding;exodeoxyribonuclease IIIs
LocationCicolChr04: 20039502 .. 20042212 (-)
RNA-Seq ExpressionCcUC04G063760
SyntenyCcUC04G063760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTCCTCGGCGGTGGATACGGAGGCGCCAGATCTAGTTTGCCACCTTGACAACGTCCAAGGCCTGGTGGATGCCTTCACTGCCGTTCGATGGAAGCGCCATCAGGTTATTCCCATTTTTCCTTCCAATTCAGTTTCATTTCCCCTTTTTTTGAACTCTACGGATTCTCTCTCTGTTTGTCTGGATTAATATGCATATTTTGTTATGATATTGATTTGCTTGTTTATCACTCAGGACGCCGTAATCGAACTATCGGAACATGGAATCGTTTTGATTGTTGAGGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGGTTTTGGATTTTGAGTTTAAAATTTTAATCTCCTAGTTATGGATTGATAAATTGATTTTAAACTGTTAATCCAACAGTTTAGTTGGGAAAAGAAATCTTGTGTTTGTGAAGTTGAAAATGATGAATAATTATGATTCAATTTGTACGAAATCTTGCTTAACTGAATTGAGATGCACATTATCATAAGAATTTATGTTCGAAGAAGGAAATTTGATGTTATGCTTGTTTCAGAGTGGCTGAAGTTCTGCTGCTTTTCTACATGCCACAGCTTTTCATTCGTTATGAATACAGTGCACAAGCTCGCCCTCGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGTCTGAATACATTTTCAGTTCCTGGACGTTTAACCACCATTGAACTCAAATACCCGGGACCTGACATGCAACTTCTTCTCAAGTATATTCACTTTGCCTCTCTGTGCATCACGTTTCATCTCTAATATAAACTCTTTGTTTGGGTTTATATATTGGTAGACAAAACCATTTCAACTCTTCTGATGTTAATTTAATTTGTTTGGTAAGATGAGAATTGTGTTTGTTTCTGGTTTTTGGGCTTGGTTTGGTATTGATTTGGAGGTGTTAACAATGACAAAGTGATTATGTGGAAATTTAATCATTTTTAGTATTTGGTTAAACAAATTACCTTGATTTGTGGAATCTAGTTAACGTAGTTTTAGAGACTGGCTTCCTAAAAAATTGGATGGCTCTCTAACCAACATTTTATAAATAACAATCTCAAACTAAGCCTTCTGTGAGCGATGTAAGGGATCATCTTATATTGGCGAGCCTCTAAGATATTCTATCAACTTGTTAAACCGTGTGATGATAAATTTTTATGTCCCTGTTTATTTTTTTATTATTTATTATTATTATTATTATTTTCGAAACGATATCTATGTATTCTATAGCGAAGAACTGTAAGGGTACTAATAGGGGTTTATGGGTCAGAGTAATATGTTATTAGTAAGTGCATAAGGGTAATTAGTTAGAGAGTTAGTGTATTTTGTTATAATTAGAGGGAGAGGGACGGAGGGAAGACAAAACAATTGGTGGAGTTATTTTGGGTTTGGATTAACATACTCAAGAGAGGAGACACCACTTGATTTATCTAGTAGTTTTCCATCCTCCAATATATTTCCGATCTTGATTCCTGTCAGGTGGTACCCTAACAAGAGCTTGTTAGTATCTTCATATTTTATGAATTCAAACTCTGGAACTGGAGAAAACCAATATAAATAGACTAATTAGAAATTCTAATTAGTTTTTCTCCTATGATGGAACAATTTTTATGCAGATCTGAGGAGAAAATACAGTTCAAATGTAAGTAACTTACTCCAGGTTTATTATCAGGTCAGTCGATTCGTTAGATGCTTGCATTTATGCAGAGATCAGAACCAGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACCTGCAGGAAACAGCCCACTCAGTTTCACTGTCAAGGTATGAGTTCATATTATAATTAACTTTGAAACCTTTTTATACATGCCAAAGATGATATCTGATATAGTTCCTAAAAGACATAAATCTGAGAATACTTTGAAGGCAAGAGAACAAAATGAAGGAATAAGTTATGAATCTAAATATTATTATTACAAGTAATCGCAGAAAAATAAGTGAAGCTTGTTGTTTGAATACTAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTGATAGCCCTACAACCAGATCCCCCTTCGGTCACCTTCAAAGGCGAAGGCCACGGAGACTTGCAGGTATGGTTTATCATAAACAAGCTGAAATGTAAAATCCTTGTAACGTAGTAAGAATATTAATACAACCTCCCAAAACGAGCATAGCTCAACTGGCATCAAGCAAGTACTATTAATTTTGAGGTTAGAGATTCAATCCTACCTATCCTTACTTCCTACCCAGGTGGATTTCATGTATTATGCAAATACCGATCTTCTGATCTCCTTCCATTGCGATCGGCAAGTGTCCTACAGGTAACATGGTTCCTTCACAAAGTTAAACATATCAAATCCTAGCACATACTTCACTTTGCTGCAATTTTCTGTTTCTTTTTTATCTTAAATGAGTTAGGTACAAATACAAGTTTCTCCGTGCAACGACTTCCAACATACCGAGCAGTGTGATGAGAGAAAACAGGGGAAGCAAATTGACTATTGGGAGAGGAGGAATGCTAAAAGTTCAACACCTTGTTTCTGTCGCAAAACCATCCACTTCACACCCACAAATAGATTCTGCTGGCTATCAGCAACCTAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGATGCCACAAACGGTTAG

mRNA sequence

ATGAGCTCCTCGGCGGTGGATACGGAGGCGCCAGATCTAGTTTGCCACCTTGACAACGTCCAAGGCCTGGTGGATGCCTTCACTGCCGTTCGATGGAAGCGCCATCAGGACGCCGTAATCGAACTATCGGAACATGGAATCGTTTTGATTGTTGAGGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGGTTTTGGATTTTGAAGTGGCTGAAGTTCTGCTGCTTTTCTACATGCCACAGCTTTTCATTCGTTATGAATACAGTGCACAAGCTCGCCCTCGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGTCTGAATACATTTTCAGTTCCTGGACGTTTAACCACCATTGAACTCAAATACCCGGGACCTGACATGCAACTTCTTCTCAAGTCAGTCGATTCGTTAGATGCTTGCATTTATGCAGAGATCAGAACCAGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACCTGCAGGAAACAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTGATAGCCCTACAACCAGATCCCCCTTCGGTCACCTTCAAAGGCGAAGGCCACGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACCGATCTTCTGATCTCCTTCCATTGCGATCGGCAAGTGTCCTACAGGTACAAATACAAGTTTCTCCGTGCAACGACTTCCAACATACCGAGCAGTGTGATGAGAGAAAACAGGGGAAGCAAATTGACTATTGGGAGAGGAGGAATGCTAAAAGTTCAACACCTTGTTTCTGTCGCAAAACCATCCACTTCACACCCACAAATAGATTCTGCTGGCTATCAGCAACCTAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGATGCCACAAACGGTTAG

Coding sequence (CDS)

ATGAGCTCCTCGGCGGTGGATACGGAGGCGCCAGATCTAGTTTGCCACCTTGACAACGTCCAAGGCCTGGTGGATGCCTTCACTGCCGTTCGATGGAAGCGCCATCAGGACGCCGTAATCGAACTATCGGAACATGGAATCGTTTTGATTGTTGAGGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGGTTTTGGATTTTGAAGTGGCTGAAGTTCTGCTGCTTTTCTACATGCCACAGCTTTTCATTCGTTATGAATACAGTGCACAAGCTCGCCCTCGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGTCTGAATACATTTTCAGTTCCTGGACGTTTAACCACCATTGAACTCAAATACCCGGGACCTGACATGCAACTTCTTCTCAAGTCAGTCGATTCGTTAGATGCTTGCATTTATGCAGAGATCAGAACCAGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACCTGCAGGAAACAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTGATAGCCCTACAACCAGATCCCCCTTCGGTCACCTTCAAAGGCGAAGGCCACGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACCGATCTTCTGATCTCCTTCCATTGCGATCGGCAAGTGTCCTACAGGTACAAATACAAGTTTCTCCGTGCAACGACTTCCAACATACCGAGCAGTGTGATGAGAGAAAACAGGGGAAGCAAATTGACTATTGGGAGAGGAGGAATGCTAAAAGTTCAACACCTTGTTTCTGTCGCAAAACCATCCACTTCACACCCACAAATAGATTCTGCTGGCTATCAGCAACCTAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGATGCCACAAACGGTTAG

Protein sequence

MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPSRIAFIEFFVKPEEDATNG
Homology
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BLAST of CcUC04G063760 vs. NCBI nr
Match: XP_038882945.1 (uncharacterized protein LOC120074039 isoform X1 [Benincasa hispida])

HSP 1 Score: 581.3 bits (1497), Expect = 5.2e-162
Identity = 292/317 (92.11%), Postives = 297/317 (93.69%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQRE                 LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+T
Sbjct: 61  VYLQRE-----------------LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLST 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           IE+KYPGPDMQLL KSVDSLDACIYAEIRTRIPDTISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 IEIKYPGPDMQLLFKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHG+LQVDFMYYANTDLLISFHCDRQVSYRY
Sbjct: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGELQVDFMYYANTDLLISFHCDRQVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGGMLKVQHLVSVAKPSTSHP IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPHIDSAGYQQPS 299

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKP EDATN
Sbjct: 301 RIAFIEFFVKP-EDATN 299

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BLAST of CcUC04G063760 vs. NCBI nr
Match: XP_008442021.1 (PREDICTED: uncharacterized protein LOC103486009 [Cucumis melo] >KAA0041777.1 Syntaxin-22 -like protein [Cucumis melo var. makuwa] >TYK27065.1 Syntaxin-22 -like protein [Cucumis melo var. makuwa])

HSP 1 Score: 576.2 bits (1484), Expect = 1.7e-160
Identity = 287/317 (90.54%), Postives = 295/317 (93.06%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLVCHFDNVQGLVDAFTAVRWKRHQDALIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQRE                 LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+T
Sbjct: 61  VYLQRE-----------------LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLST 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           IELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 IELKYPGPDMQLLLKTVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSVLIALQP PPSVTFK EGHGDLQVDFMYYANTDLLISFHCDRQVSYRY
Sbjct: 181 EAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGG+LKVQHLVSVAKPSTSH  IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSTSHTHIDSAGYQQPS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED++N
Sbjct: 301 RIAFIEFFVKPEEDSSN 300

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BLAST of CcUC04G063760 vs. NCBI nr
Match: XP_004149108.1 (uncharacterized protein LOC101219270 [Cucumis sativus] >KGN53911.1 hypothetical protein Csa_019173 [Cucumis sativus])

HSP 1 Score: 571.2 bits (1471), Expect = 5.4e-159
Identity = 284/317 (89.59%), Postives = 293/317 (92.43%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDL+CH DNVQGLVDAFT+VRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQRE                 LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+T
Sbjct: 61  VYLQRE-----------------LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLST 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           IELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 IELKYPGPDMQLLLKTVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSVLIALQP PPSVTFK EGHGDLQVDFMYYANTDLLISFHCD+QVSYRY
Sbjct: 181 EAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGG+LKVQHLVSV KPSTSH  IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED+ N
Sbjct: 301 RIAFIEFFVKPEEDSPN 300

[Close]
BLAST of CcUC04G063760 vs. NCBI nr
Match: XP_023534468.1 (uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.7 bits (1454), Expect = 5.1e-157
Identity = 280/317 (88.33%), Postives = 291/317 (91.80%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVD EAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAK
Sbjct: 1   MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGVVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQREV                 FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+ 
Sbjct: 61  VYLQREV-----------------FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSI 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 VEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSV I+L+P PPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDR VSYRY
Sbjct: 181 EAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRPVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGGMLKVQHLVSVA+PSTSHP IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED T+
Sbjct: 301 RIAFIEFFVKPEEDTTD 300

[Close]
BLAST of CcUC04G063760 vs. NCBI nr
Match: XP_022996322.1 (uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima])

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156
Identity = 281/317 (88.64%), Postives = 291/317 (91.80%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVD EAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQREV                 FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+ 
Sbjct: 61  VYLQREV-----------------FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSI 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 VEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSV I+L+P PPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDR VSYRY
Sbjct: 181 EAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRPVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGGMLKVQHLVSVA+PSTSHP IDSAGYQQ S
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED T+
Sbjct: 301 RIAFIEFFVKPEEDTTD 300

[Close]
BLAST of CcUC04G063760 vs. ExPASy Swiss-Prot
Match: Q9QWZ1 (Cell cycle checkpoint protein RAD1 OS=Mus musculus OX=10090 GN=Rad1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.3e-17
Identity = 80/313 (25.56%), Postives = 139/313 (44.41%), Query Frame = 0 

Query: 13  LVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVLDFEV 72
           LV  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q +V     
Sbjct: 17  LVASLDNVRNLSTVLKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQADVF---- 76

Query: 73  AEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLTTIELKYPGPD 132
                     Q F+  E S      F ++L I +D L+ F     PG LT + + Y G  
Sbjct: 77  ----------QEFVIQEESV----TFRINLTILLDCLSIFGSSPTPGTLTALRMCYQGYG 136

Query: 133 MQLLLKSVDSLDACIYAEIRTRIP-DTISWDYNFEPAGNSPLSFTVKSAALKEAIDDLEW 192
             L+L  ++        +I T+ P +T+ +D+    + N      ++S  L+EA  +L+ 
Sbjct: 137 HPLML-FLEEGGVVTVCKITTQEPEETLDFDF---CSTNVMNKIILQSEGLREAFSELDM 196

Query: 193 PGSSVLIALQPDPPSV---TFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYKYKFL 252
            G  + I + PD P     TF   G+  L     Y  ++DL+ +FHCD+    RYK   L
Sbjct: 197 TGDVLQITVSPDKPYFRLSTFGNAGNSHLD----YPKDSDLVEAFHCDKTQVNRYKLSLL 256

Query: 253 RATTS----NIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPSR 312
           + +T     +   S+  +NR         G L +Q+++                  +  +
Sbjct: 257 KPSTKALALSCKVSIRTDNR---------GFLSLQYMIR----------------NEDGQ 276

Query: 313 IAFIEFFVKPEED 315
           I F+E++  P+E+
Sbjct: 317 ICFVEYYCCPDEE 276

[Close]
BLAST of CcUC04G063760 vs. ExPASy TrEMBL
Match: A0A5D3DUR6 (Syntaxin-22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00620 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.2e-161
Identity = 287/317 (90.54%), Postives = 295/317 (93.06%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLVCHFDNVQGLVDAFTAVRWKRHQDALIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQRE                 LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+T
Sbjct: 61  VYLQRE-----------------LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLST 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           IELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 IELKYPGPDMQLLLKTVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSVLIALQP PPSVTFK EGHGDLQVDFMYYANTDLLISFHCDRQVSYRY
Sbjct: 181 EAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGG+LKVQHLVSVAKPSTSH  IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSTSHTHIDSAGYQQPS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED++N
Sbjct: 301 RIAFIEFFVKPEEDSSN 300

[Close]
BLAST of CcUC04G063760 vs. ExPASy TrEMBL
Match: A0A1S3B4R8 (uncharacterized protein LOC103486009 OS=Cucumis melo OX=3656 GN=LOC103486009 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.2e-161
Identity = 287/317 (90.54%), Postives = 295/317 (93.06%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLVCHFDNVQGLVDAFTAVRWKRHQDALIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQRE                 LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+T
Sbjct: 61  VYLQRE-----------------LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLST 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           IELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 IELKYPGPDMQLLLKTVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSVLIALQP PPSVTFK EGHGDLQVDFMYYANTDLLISFHCDRQVSYRY
Sbjct: 181 EAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGG+LKVQHLVSVAKPSTSH  IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSTSHTHIDSAGYQQPS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED++N
Sbjct: 301 RIAFIEFFVKPEEDSSN 300

[Close]
BLAST of CcUC04G063760 vs. ExPASy TrEMBL
Match: A0A0A0L199 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188390 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.6e-159
Identity = 284/317 (89.59%), Postives = 293/317 (92.43%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVDTEAPDL+CH DNVQGLVDAFT+VRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQRE                 LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+T
Sbjct: 61  VYLQRE-----------------LFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLST 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           IELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 IELKYPGPDMQLLLKTVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSVLIALQP PPSVTFK EGHGDLQVDFMYYANTDLLISFHCD+QVSYRY
Sbjct: 181 EAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGG+LKVQHLVSV KPSTSH  IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED+ N
Sbjct: 301 RIAFIEFFVKPEEDSPN 300

[Close]
BLAST of CcUC04G063760 vs. ExPASy TrEMBL
Match: A0A6J1K1L0 (uncharacterized protein LOC111491589 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491589 PE=3 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.5e-157
Identity = 281/317 (88.64%), Postives = 291/317 (91.80%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVD EAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQREV                 FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+ 
Sbjct: 61  VYLQREV-----------------FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSI 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 VEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSV I+L+P PPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDR VSYRY
Sbjct: 181 EAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRPVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGGMLKVQHLVSVA+PSTSHP IDSAGYQQ S
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED T+
Sbjct: 301 RIAFIEFFVKPEEDTTD 300

[Close]
BLAST of CcUC04G063760 vs. ExPASy TrEMBL
Match: A0A6J1GZY3 (uncharacterized protein LOC111459157 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459157 PE=3 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 9.3e-157
Identity = 279/317 (88.01%), Postives = 291/317 (91.80%), Query Frame = 0 

Query: 1   MSSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60
           MSSSAVD ++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 61  VYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTT 120
           VYLQREV                 FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL+ 
Sbjct: 61  VYLQREV-----------------FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSI 120

Query: 121 IELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALK 180
           +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAG+SPLSFTVKSAALK
Sbjct: 121 VEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALK 180

Query: 181 EAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRY 240
           EAIDDLEWPGSSV I+L+P PPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDR VSYRY
Sbjct: 181 EAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRPVSYRY 240

Query: 241 KYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPS 300
           KYKFLRATTSNIPSSV+RENRGSKLTIGRGGMLKVQHLVSVA+PSTSHP IDSAGYQQPS
Sbjct: 241 KYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPS 300

Query: 301 RIAFIEFFVKPEEDATN 318
           RIAFIEFFVKPEED T+
Sbjct: 301 RIAFIEFFVKPEEDTTD 300

[Close]
BLAST of CcUC04G063760 vs. TAIR 10
Match: AT4G17760.1 (damaged DNA binding;exodeoxyribonuclease IIIs )

HSP 1 Score: 479.6 bits (1233), Expect = 2.0e-135
Identity = 230/314 (73.25%), Postives = 266/314 (84.71%), Query Frame = 0 

Query: 2   SSSAVDTEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKV 61
           SS A++ + PDL+C LDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKV
Sbjct: 5   SSPAIEPDTPDLICQLDNVQGMVDALTCVRWKRHQDALVELSEHGIVLIVEESGCLQAKV 64

Query: 62  YLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLTTI 121
           YLQRE                 LF +YEY AQ RPRFG+SLG+ VD LNTFS PG   TI
Sbjct: 65  YLQRE-----------------LFTKYEYGAQGRPRFGISLGLLVDCLNTFSSPGHSNTI 124

Query: 122 ELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSFTVKSAALKE 181
           E+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +PL+FTVKSAALKE
Sbjct: 125 EIKYPGPDMELLLKSVDTLNSCIYSEIRTRIPETVTWDYNFEQAGIAPLTFTVKSAALKE 184

Query: 182 AIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYK 241
           AIDDLEWPGSSV I+LQ +PP V F+GEGHGDLQ+DFMYYANTDLL++FHCD +VSY YK
Sbjct: 185 AIDDLEWPGSSVQISLQKEPPCVIFRGEGHGDLQIDFMYYANTDLLLAFHCDTEVSYGYK 244

Query: 242 YKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQIDSAGYQQPSR 301
           YKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV+K     PQ++SAGYQ PSR
Sbjct: 245 YKFLKATTANIPGNVVRENRGSKLTIGRGGMLKVQHLVSVSKALA--PQVESAGYQPPSR 299

Query: 302 IAFIEFFVKPEEDA 316
           IA+IEFFVKPEE A
Sbjct: 305 IAYIEFFVKPEEPA 299

[Close]
BLAST of CcUC04G063760 vs. TAIR 10
Match: AT4G17760.2 (damaged DNA binding;exodeoxyribonuclease IIIs )

HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-110
Identity = 192/263 (73.00%), Postives = 221/263 (84.03%), Query Frame = 0 

Query: 53  ESGCLQAKVYLQREVLDFEVAEVLLLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTF 112
           ESGCLQAKVYLQRE                 LF +YEY AQ RPRFG+SLG+ VD LNTF
Sbjct: 6   ESGCLQAKVYLQRE-----------------LFTKYEYGAQGRPRFGISLGLLVDCLNTF 65

Query: 113 SVPGRLTTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGNSPLSF 172
           S PG   TIE+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +PL+F
Sbjct: 66  SSPGHSNTIEIKYPGPDMELLLKSVDTLNSCIYSEIRTRIPETVTWDYNFEQAGIAPLTF 125

Query: 173 TVKSAALKEAIDDLEWPGSSVLIALQPDPPSVTFKGEGHGDLQVDFMYYANTDLLISFHC 232
           TVKSAALKEAIDDLEWPGSSV I+LQ +PP V F+GEGHGDLQ+DFMYYANTDLL++FHC
Sbjct: 126 TVKSAALKEAIDDLEWPGSSVQISLQKEPPCVIFRGEGHGDLQIDFMYYANTDLLLAFHC 185

Query: 233 DRQVSYRYKYKFLRATTSNIPSSVMRENRGSKLTIGRGGMLKVQHLVSVAKPSTSHPQID 292
           D +VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV+K     PQ++
Sbjct: 186 DTEVSYGYKYKFLKATTANIPGNVVRENRGSKLTIGRGGMLKVQHLVSVSKALA--PQVE 245

Query: 293 SAGYQQPSRIAFIEFFVKPEEDA 316
           SAGYQ PSRIA+IEFFVKPEE A
Sbjct: 246 SAGYQPPSRIAYIEFFVKPEEPA 249

The following BLAST results are available for this feature:
BLAST of CcUC04G063760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882945.15.2e-16292.11uncharacterized protein LOC120074039 isoform X1 [Benincasa hispida][more]
XP_008442021.11.7e-16090.54PREDICTED: uncharacterized protein LOC103486009 [Cucumis melo] >KAA0041777.1 Syn... [more]
XP_004149108.15.4e-15989.59uncharacterized protein LOC101219270 [Cucumis sativus] >KGN53911.1 hypothetical ... [more]
XP_023534468.15.1e-15788.33uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022996322.11.1e-15688.64uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima][more]
BLAST of CcUC04G063760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9QWZ16.3e-1725.56Cell cycle checkpoint protein RAD1 OS=Mus musculus OX=10090 GN=Rad1 PE=1 SV=1[more]
BLAST of CcUC04G063760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DUR68.2e-16190.54Syntaxin-22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3B4R88.2e-16190.54uncharacterized protein LOC103486009 OS=Cucumis melo OX=3656 GN=LOC103486009 PE=... [more]
A0A0A0L1992.6e-15989.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188390 PE=3 SV=1[more]
A0A6J1K1L05.5e-15788.64uncharacterized protein LOC111491589 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GZY39.3e-15788.01uncharacterized protein LOC111459157 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of CcUC04G063760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G17760.12.0e-13573.25damaged DNA binding;exodeoxyribonuclease IIIs [more]
AT4G17760.21.3e-11073.00damaged DNA binding;exodeoxyribonuclease IIIs [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003021Rad1/Rec1/Rad17PFAMPF02144Rad1coord: 14..255
e-value: 1.1E-15
score: 57.5
IPR003021Rad1/Rec1/Rad17PANTHERPTHR10870CELL CYCLE CHECKPOINT PROTEIN RAD1coord: 9..314
NoneNo IPR availableGENE3D3.70.10.10coord: 10..313
e-value: 2.5E-43
score: 149.9
NoneNo IPR availableCDDcd00577PCNAcoord: 32..279
e-value: 6.63153E-36
score: 128.131
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 170..278

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G063760.1CcUC04G063760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000077 DNA damage checkpoint signaling
biological_process GO:0006281 DNA repair
cellular_component GO:0030896 checkpoint clamp complex