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CcUC04G062210 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAATGGGTGTAAGCCTCGCTGCTCGGAAACACCCAGTGCTGACCACACTGAGAGACACAAAAGCGCAGGTAACGCCAGTTGGCGAAGTGGCGTTAAGCATCCCTAGCGGTACGAAAAGAGAGGTCGTGATGATATCATCTACGTCCGTACCGCTCCTCGTGGAGTAGATCCCGCATCCAACCAAGTCTTTGACCAGGGAACGGGAGAATTCCCACTACCGCTAGCAGGCCAGCCGTGCCGTGAGCGCGGTGGGAACTGGCTTCCCAAAAAGCCAGCCTGGGGCCGGAGTCAGCATAGAATGAAGGGGACGACCAGTTGTGTTGGCAAAGCCAACTTCTTGGGTTTCGGGCGGAGAAGAGTGGACATGGGGACTCGAGTCAGGGCGCAGCGTAACTAAGAGAGCCATTCCATTTAGGGCGAGCCCGTGTGGTTATGGGGGCGGGCACGAGCGGTCTGGTGTCCAAGCCAATTGGTCAGACGATGATGACTTCACTTATTAG ATGCGAATGGGTGTAAGCCTCGCTGCTCGGAAACACCCAGTGCTGACCACACTGAGAGACACAAAAGCGCAGGGAACGGGAGAATTCCCACTACCGCTAGCAGGCCAGCCGTGCCGTGAGCGCGGTGGGAACTGGCTTCCCAAAAAGCCAGCCTGGGGCCGGAGGCGCAGCGTAACTAAGAGAGCCATTCCATTTAGGGCGAGCCCGTGTGGTTATGGGGGCGGGCACGAGCGGTCTGGTGTCCAAGCCAATTGGTCAGACGATGATGACTTCACTTATTAG ATGCGAATGGGTGTAAGCCTCGCTGCTCGGAAACACCCAGTGCTGACCACACTGAGAGACACAAAAGCGCAGGGAACGGGAGAATTCCCACTACCGCTAGCAGGCCAGCCGTGCCGTGAGCGCGGTGGGAACTGGCTTCCCAAAAAGCCAGCCTGGGGCCGGAGGCGCAGCGTAACTAAGAGAGCCATTCCATTTAGGGCGAGCCCGTGTGGTTATGGGGGCGGGCACGAGCGGTCTGGTGTCCAAGCCAATTGGTCAGACGATGATGACTTCACTTATTAG MRMGVSLAARKHPVLTTLRDTKAQGTGEFPLPLAGQPCRERGGNWLPKKPAWGRRRSVTKRAIPFRASPCGYGGGHERSGVQANWSDDDDFTY Homology
BLAST of CcUC04G062210 vs. NCBI nr
Match: CAN83576.1 (hypothetical protein VITISV_021757 [Vitis vinifera]) HSP 1 Score: 94.4 bits (233), Expect = 5.7e-16 Identity = 63/120 (52.50%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of CcUC04G062210 vs. NCBI nr
Match: PKI33354.1 (hypothetical protein CRG98_046251 [Punica granatum]) HSP 1 Score: 82.4 bits (202), Expect = 2.2e-12 Identity = 47/75 (62.67%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of CcUC04G062210 vs. NCBI nr
Match: OIT40703.1 (hypothetical protein A4A49_63613 [Nicotiana attenuata]) HSP 1 Score: 80.9 bits (198), Expect = 6.5e-12 Identity = 47/79 (59.49%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of CcUC04G062210 vs. NCBI nr
Match: KAG6736883.1 (hypothetical protein POTOM_060194 [Populus tomentosa]) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11 Identity = 47/69 (68.12%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of CcUC04G062210 vs. NCBI nr
Match: PWA81401.1 (cytochrome c-type biogenesis protein CcmF, mitochondrion [Artemisia annua]) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 56/103 (54.37%), Postives = 61/103 (59.22%), Query Frame = 0
BLAST of CcUC04G062210 vs. ExPASy TrEMBL
Match: A0A6N2MN25 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS388815 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.2e-17 Identity = 58/95 (61.05%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of CcUC04G062210 vs. ExPASy TrEMBL
Match: A5BTL1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_021757 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16 Identity = 63/120 (52.50%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of CcUC04G062210 vs. ExPASy TrEMBL
Match: A0A6N2KT43 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS135830 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13 Identity = 47/70 (67.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CcUC04G062210 vs. ExPASy TrEMBL
Match: A0A6N2KH66 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS25461 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13 Identity = 47/70 (67.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CcUC04G062210 vs. ExPASy TrEMBL
Match: A0A2I0HNP4 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_046251 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12 Identity = 47/75 (62.67%), Postives = 47/75 (62.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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