CcUC04G061750 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G061750
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description(thale cress) hypothetical protein
LocationCicolChr04: 12478583 .. 12480819 (+)
RNA-Seq ExpressionCcUC04G061750
SyntenyCcUC04G061750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTAAGGTACATTACCTCCACGTAAACGTACATTTATATACACAAAGGTCAGTATCGACAATGCCCGTTGGAATAAAAACCGCAATATTTGGATAAGAATTTTGAGAATAAATATATTTTAATTAAAGTTAAAATGTTAATAAAAATTAAAAATCTCTAAACTAACTTAGGATTATATCAATTAAAATATCAAACTAATTATTATATCAATTATATCTTTATGGTTTAATAAGTAAATTAATTTAGACATTTATTAAAATTTCGTTTTAAAATTGTTAACACATAATTGTTACGTATGTGTAAGACTAATTTAAATGCATGTATTAACAAAATTCAAAAGAATATGATGTAATCAAATAAGTAGCACCCATTTTCATTAATATGAGTGTTTTATCATTTGTCTTTTTCCTCAAAATTTTCTCGAACTTTATAGAAAAACCTACACCATAAATTTTTCTTGCTGACTTTGGTAGAATTTTAGAAGAAGAATACTTTAATTTAAAGATTTTTGAGTTGATTTTAAATATAATCCAGTGAAAATAGCTATAAATTAATGACAAATAATTCACTTTCAAAAGTTTAAGATTTAAATTAATATAATTATTCGTTTGAGGTTTTTAATAGTTATAACCTCGAGAGTATAATTTATAGAGATAACATCAAGAGTTTGAAGAGTATAATAGATATAGCCTATTTTTCAAAATTGATAGATTAAATTGGCCAAATTAAATTCTTAGGAACCGAATGTACCTATTCTTAAAAATTTAAGAACTAAAATGTGATTTTTTTCTATTTATATATTTTTAGTTAAAATTACAAGTTTAGCCTCTATAATTGTACTTTTGTGTCAAATAGTTCTCTAATCTTTAAAAAAAAATTATCCAATATGTTATGAACTTTCAATTTTGTACCAAATAGGTAGTATTGCGTTCACCATTTTTTAAATTAACAAATTTAGACATTAAACTTCCAATTTTGTGTTTGTGTAAAAAAAAATTTTAATAAAAAATTAAAAATTCAGCAACTTAGAAAATAAATAATGTAAGGATTTAAACAAATACTCTAATAAGTAACAATTTATTCTCTATACTTTAAAATTTGTGATAATTTAGTCCCATCATAAAATTATCATGAAAATTAAGTGTTGATTTTGATTAAGTAATAACTTATTATATATATATATATATATATATATATATATATTAGTTTATCAATCTACATGTATAAAAAAACATTGTTAAGTCCTACAAAATTTTTAAGATAGTGACTAAATCAATACAAAATTTAAACTAAACATTTCCTTACTAAAGTTCATTAACTAAGGTTTCATTTGGTATTTGGTTTTTGTTTTTGAAAATTAAGTCTACAGAGACTACTTTCACCTCTAAATTACTATCTACTTTTTATCAATTGTATAAAAACCAAGCCAAATTATAAAAACTAAAAAATTAGCTTTAAAAAACTTGTATTTGTTTTTTAAATTTGGCTAAAAATTCAACCATTATACCAAATAATTGTAAGAAATTGAAGAAATGGGTTTAATTATGAGAAATCAAAAGTAAAAACAAAATTGTTACCCAACGAATCTAAGTTATTGCAAATTTAAAAGTATATACACTAAGGGTGTGGTTGGAATATATTTTCAAGCATTTAATTTAAACAATAAGTTATTTTGAAAAAATTAGAGTGTTTGGAAACCACTAAAAATACATTTTGAGATATATTTTAAACAGTTTCTATAAAAAGATAAGTTTAAACAAAAATGAGTTTTCTAAACAAATATTTTTTTTTTCAAAGATTAAATTGTAATTTTCGTGAAAATTGAGGACCAAAAGGCAAAAACTTATTCAAAACGTCTAAAGTTGAAAACATACCAAATAAAAAGTTGGATACAAAGCAGAAACCATTACCTCTATGCAATCGCAATCTCTGTTCTTTCTTAGCAGAAAGAAAAAGCTCAAATTTTCAGAATTACTTAAATGCAGCTGCTGCCGGACCCACCGCCGGAGACGACGGAGCCATCCCACTCCACTCGTCACTCCATCGAGACGCTGGTGGTTCTGCTGGCGGCGATCACTATTTTTGGTGTCATTGCCCGAGCTTTCGCTCGCCTCTGCGGCGGAGGAACCGACATTGAAGGTTGGGTTGAAAGAAGGTGCAAGAGCTGCATTGTCGGCGATCTCCCTGCTCCGTCGCCGCCGCCACCGGAAGTGGCGGAGGAGAAGAAGTGA

mRNA sequence

ATGGATCTGCTGCCGGACCCACCGCCGGAGACGACGGAGCCATCCCACTCCACTCGTCACTCCATCGAGACGCTGGTGGTTCTGCTGGCGGCGATCACTATTTTTGGTGTCATTGCCCGAGCTTTCGCTCGCCTCTGCGGCGGAGGAACCGACATTGAAGGTTGGGTTGAAAGAAGGTGCAAGAGCTGCATTGTCGGCGATCTCCCTGCTCCGTCGCCGCCGCCACCGGAAGTGGCGGAGGAGAAGAAGTGA

Coding sequence (CDS)

ATGGATCTGCTGCCGGACCCACCGCCGGAGACGACGGAGCCATCCCACTCCACTCGTCACTCCATCGAGACGCTGGTGGTTCTGCTGGCGGCGATCACTATTTTTGGTGTCATTGCCCGAGCTTTCGCTCGCCTCTGCGGCGGAGGAACCGACATTGAAGGTTGGGTTGAAAGAAGGTGCAAGAGCTGCATTGTCGGCGATCTCCCTGCTCCGTCGCCGCCGCCACCGGAAGTGGCGGAGGAGAAGAAGTGA

Protein sequence

MDLLPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGGTDIEGWVERRCKSCIVGDLPAPSPPPPEVAEEKK
Homology
BLAST of CcUC04G061750 vs. NCBI nr
Match: KGN53864.2 (hypothetical protein Csa_019149 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 5.2e-21
Identity = 60/86 (69.77%), Postives = 66/86 (76.74%), Query Frame = 0

Query: 1  MDLLPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGGTD---IEGWVE 60
          M LLP+PP    EPSHSTRHS+ TL+VLLAAITI GVIAR FARLCGGGTD   IEGWV+
Sbjct: 19 MQLLPEPP---AEPSHSTRHSLHTLLVLLAAITILGVIARVFARLCGGGTDDDNIEGWVQ 78

Query: 61 RRCKSCIVGDLPAPSPPPPEVAEEKK 84
           RC SCI G     SPPP +VAEE+K
Sbjct: 79 TRCNSCIDGS----SPPPSQVAEEEK 97

BLAST of CcUC04G061750 vs. NCBI nr
Match: XP_008460761.1 (PREDICTED: uncharacterized protein LOC103499518 [Cucumis melo] >KAA0056141.1 uncharacterized protein E6C27_scaffold697G00230 [Cucumis melo var. makuwa] >TYK14146.1 uncharacterized protein E5676_scaffold513G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 2.0e-20
Identity = 61/85 (71.76%), Postives = 67/85 (78.82%), Query Frame = 0

Query: 1  MDLLPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGGT-DIEGWVERR 60
          M LLP+PP    EPSHSTRHS++TL+VLLAAITI GVIAR FARLC GGT DIEGWV+ R
Sbjct: 15 MQLLPEPP---AEPSHSTRHSVQTLLVLLAAITILGVIARVFARLCDGGTDDIEGWVQTR 74

Query: 61 CKSCIVG-DLPAPSPPPPEVAEEKK 84
          C SCI G  LPA   PP EVAEE+K
Sbjct: 75 CNSCIDGSSLPA---PPSEVAEEEK 93

BLAST of CcUC04G061750 vs. NCBI nr
Match: XP_034693668.1 (uncharacterized protein LOC117920325 [Vitis riparia])

HSP 1 Score: 97.8 bits (242), Expect = 4.6e-17
Identity = 54/88 (61.36%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 4   LPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCG-------GGTDIEGWV 63
           L   PP   EPSHST  S+ETLVV+LA ITI GVIA   ARLCG       G  DIEGWV
Sbjct: 19  LVQAPPAVGEPSHSTHRSLETLVVVLAVITIVGVIAGIIARLCGGRHFGGNGENDIEGWV 78

Query: 64  ERRCKSCIVGDLPA-PSPPPPEVAEEKK 84
           ER+C+SCI G +PA P PPPP  AEE K
Sbjct: 79  ERKCRSCIDGGIPAPPPPPPPPPAEESK 106

BLAST of CcUC04G061750 vs. NCBI nr
Match: XP_010653790.1 (PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera] >RVX09549.1 hypothetical protein CK203_012350 [Vitis vinifera])

HSP 1 Score: 97.1 bits (240), Expect = 7.8e-17
Identity = 52/86 (60.47%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 4   LPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCG-------GGTDIEGWV 63
           L   PP   EPSHST  SIETLVV+LA ITI GVIA   ARLCG       G  DIEGWV
Sbjct: 19  LVQAPPAVGEPSHSTHRSIETLVVVLAVITIVGVIAGIIARLCGGRHFGGNGENDIEGWV 78

Query: 64  ERRCKSCIVGDLPAPSPPPPEVAEEK 83
           ER+C+SCI G +PA  PPPP   E K
Sbjct: 79  ERKCRSCIDGGIPAAPPPPPPAEESK 104

BLAST of CcUC04G061750 vs. NCBI nr
Match: XP_022928636.1 (uncharacterized protein LOC111435483 [Cucurbita moschata] >KAG6603224.1 hypothetical protein SDJN03_03833, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033532.1 hypothetical protein SDJN02_03254, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-16
Identity = 57/95 (60.00%), Postives = 62/95 (65.26%), Query Frame = 0

Query: 1   MDLLPDPPPET-TEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGG---------- 60
           M  LPDP P T TEPSHS + SI+TLVV+LA I I GVIAR  AR CGG           
Sbjct: 9   MQPLPDPTPATATEPSHSGQ-SIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGGDGE 68

Query: 61  TDIEGWVERRCKSCIVGDL-PAPSPPPPEVAEEKK 84
            DIEGWVER C+SCI G +   P PPPPE AEEKK
Sbjct: 69  NDIEGWVERTCRSCIDGGVGTPPPPPPPEAAEEKK 102

BLAST of CcUC04G061750 vs. ExPASy TrEMBL
Match: A0A0A0KWC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166970 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-21
Identity = 60/86 (69.77%), Postives = 66/86 (76.74%), Query Frame = 0

Query: 1  MDLLPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGGTD---IEGWVE 60
          M LLP+PP    EPSHSTRHS+ TL+VLLAAITI GVIAR FARLCGGGTD   IEGWV+
Sbjct: 15 MQLLPEPP---AEPSHSTRHSLHTLLVLLAAITILGVIARVFARLCGGGTDDDNIEGWVQ 74

Query: 61 RRCKSCIVGDLPAPSPPPPEVAEEKK 84
           RC SCI G     SPPP +VAEE+K
Sbjct: 75 TRCNSCIDGS----SPPPSQVAEEEK 93

BLAST of CcUC04G061750 vs. ExPASy TrEMBL
Match: A0A5A7URI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00170 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.6e-21
Identity = 61/85 (71.76%), Postives = 67/85 (78.82%), Query Frame = 0

Query: 1  MDLLPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGGT-DIEGWVERR 60
          M LLP+PP    EPSHSTRHS++TL+VLLAAITI GVIAR FARLC GGT DIEGWV+ R
Sbjct: 15 MQLLPEPP---AEPSHSTRHSVQTLLVLLAAITILGVIARVFARLCDGGTDDIEGWVQTR 74

Query: 61 CKSCIVG-DLPAPSPPPPEVAEEKK 84
          C SCI G  LPA   PP EVAEE+K
Sbjct: 75 CNSCIDGSSLPA---PPSEVAEEEK 93

BLAST of CcUC04G061750 vs. ExPASy TrEMBL
Match: A0A1S3CEC8 (uncharacterized protein LOC103499518 OS=Cucumis melo OX=3656 GN=LOC103499518 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.6e-21
Identity = 61/85 (71.76%), Postives = 67/85 (78.82%), Query Frame = 0

Query: 1  MDLLPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGGT-DIEGWVERR 60
          M LLP+PP    EPSHSTRHS++TL+VLLAAITI GVIAR FARLC GGT DIEGWV+ R
Sbjct: 15 MQLLPEPP---AEPSHSTRHSVQTLLVLLAAITILGVIARVFARLCDGGTDDIEGWVQTR 74

Query: 61 CKSCIVG-DLPAPSPPPPEVAEEKK 84
          C SCI G  LPA   PP EVAEE+K
Sbjct: 75 CNSCIDGSSLPA---PPSEVAEEEK 93

BLAST of CcUC04G061750 vs. ExPASy TrEMBL
Match: A0A438JKT6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_012350 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.8e-17
Identity = 52/86 (60.47%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 4   LPDPPPETTEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCG-------GGTDIEGWV 63
           L   PP   EPSHST  SIETLVV+LA ITI GVIA   ARLCG       G  DIEGWV
Sbjct: 19  LVQAPPAVGEPSHSTHRSIETLVVVLAVITIVGVIAGIIARLCGGRHFGGNGENDIEGWV 78

Query: 64  ERRCKSCIVGDLPAPSPPPPEVAEEK 83
           ER+C+SCI G +PA  PPPP   E K
Sbjct: 79  ERKCRSCIDGGIPAAPPPPPPAEESK 104

BLAST of CcUC04G061750 vs. ExPASy TrEMBL
Match: A0A6J1EKU9 (uncharacterized protein LOC111435483 OS=Cucurbita moschata OX=3662 GN=LOC111435483 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16
Identity = 57/95 (60.00%), Postives = 62/95 (65.26%), Query Frame = 0

Query: 1   MDLLPDPPPET-TEPSHSTRHSIETLVVLLAAITIFGVIARAFARLCGGG---------- 60
           M  LPDP P T TEPSHS + SI+TLVV+LA I I GVIAR  AR CGG           
Sbjct: 9   MQPLPDPTPATATEPSHSGQ-SIQTLVVVLAVIIILGVIARILARFCGGNHSGGGGGDGE 68

Query: 61  TDIEGWVERRCKSCIVGDL-PAPSPPPPEVAEEKK 84
            DIEGWVER C+SCI G +   P PPPPE AEEKK
Sbjct: 69  NDIEGWVERTCRSCIDGGVGTPPPPPPPEAAEEKK 102

BLAST of CcUC04G061750 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 4.4e-18
Identity = 49/90 (54.44%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 8   PPETTEPSHSTRH-SIETLVVLLAAITIFGVIARAFARLC-------GGGTDIEGWVERR 67
           PP   +PSH++ H SIETLVV+LA ITI  V+A  FARLC       GG  DIEGWVER+
Sbjct: 23  PPSQDQPSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRHLSHGGDHDIEGWVERK 82

Query: 68  CKSCIVGDLPA-------PSPPPPEVAEEK 83
           C+SCI   +PA       P PPPP  AEE+
Sbjct: 83  CRSCIDAGIPAVSAAPSPPPPPPPATAEER 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN53864.25.2e-2169.77hypothetical protein Csa_019149 [Cucumis sativus][more]
XP_008460761.12.0e-2071.76PREDICTED: uncharacterized protein LOC103499518 [Cucumis melo] >KAA0056141.1 unc... [more]
XP_034693668.14.6e-1761.36uncharacterized protein LOC117920325 [Vitis riparia][more]
XP_010653790.17.8e-1760.47PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera] >RVX09549.1 hyp... [more]
XP_022928636.13.9e-1660.00uncharacterized protein LOC111435483 [Cucurbita moschata] >KAG6603224.1 hypothet... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWC62.5e-2169.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166970 PE=4 SV=1[more]
A0A5A7URI49.6e-2171.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CEC89.6e-2171.76uncharacterized protein LOC103499518 OS=Cucumis melo OX=3656 GN=LOC103499518 PE=... [more]
A0A438JKT63.8e-1760.47Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_012350 PE=4 SV=1[more]
A0A6J1EKU91.9e-1660.00uncharacterized protein LOC111435483 OS=Cucurbita moschata OX=3662 GN=LOC1114354... [more]
Match NameE-valueIdentityDescription
AT3G57500.14.4e-1854.44unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33429OS02G0708000 PROTEIN-RELATEDcoord: 7..82
NoneNo IPR availablePANTHERPTHR33429:SF19FISSION REGULATOR-LIKE PROTEINcoord: 7..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G061750.1CcUC04G061750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane