CcUC04G060920 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G060920
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 7392109 .. 7394581 (+)
RNA-Seq ExpressionCcUC04G060920
SyntenyCcUC04G060920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCGTGAGAGTTTCGTTTTAATAATTTCTTTTTTTTCCAAATTCAGGGCATTCGTACGAAAACTACTATCTTTTGTCCCAAACATAAACTTGGAAAGGGGATAATTTTGTCAATTGCCCAATTAACTCTCCTCCTTTTCGTGTATCAGCCCCTCGTTTGGTTCAATCAACCGCCGCACCCTCCCACCTTCAGCCTTCCTACTCCGGCCATCCACGCGAGGCCTCTTGCGAGTCGCCAACGGCGGTGTAAGGCTAGGGGCTCTCCCTCTTCGTGCGACCCACGAAAAACCCGCGAGGTTTATTCTCTGGGGAGCAGCTGCGAAACCCTGCCACGTCACCAATTTCGGCAACAGCGCCTTGCGAACAGGGACGCTTCTACCCAAGAACCTAACTCGTGGCGGTTCCCGGCGACGCCTCCGTGTACAAACGGCGGTTTCTTCTTCCTTATTCCAACGACCACACAGCAGCAGCAGCAAACCAACGTGACGTACGCGATTTCGGCAGTTTACAGTGCTTTTTCCTCATTCCGACAAGTTTTGGCTCTGACCCACTCCCACGGACCTTAGATTAGCGTTACTCACTCCCTAGCGGCTTCAAATCTACAGGTTTAAGCCTATTCAAACGCTAGTTCTAGGGCTGTTTTACAGCGTTCAGTAGGTACTAGCGTGCTTTAGTTCCTTACATACTTGATTTAAGTGTTGTGCATTGGTCTCTAACCCTTGGGCACTCTTGGCTTGTTTGGGATTGATTCGGATATTTGAATTAAGGTAAATTAACGTTTAAGATTGTTTTGGTCAAGAATTTTCCTTCTGTACGCCGTTTTGGCTTCAGCTAAGGTTTTCAACGAAGTTATAATCTTAGAATCTTGTTCTTATTGTTTTAGGGGTATATTGAATAGTTTAGTAGCGGTTTAGGATGTTTAGTAAGTAGAATTTTATTTTTTGGATCTGTTTGTTGTGTGTGCATGCTTTGTGTTTTACTTATTTGATTATAATATGCGTATTTTTATGAACGGTAGTGTTTTAGGATGAGTTTTGAGCTGATTTTGGATGTTAAGCGTGATGAGTTGTTGAGTGCATTGTGGTGATGAACATACTGATTTGTGGAGTTTATCCAGAAAAGTTTAACTTCTTTTAATCTGTGAGCATGTTGTGTAAATGTGATAATAAAGTATAGTCTAGAACGCATGTTTTAGGTTGTGCATGTCTGGATTTCTACGAGCCTATTTAGTGAGAAGGGTCAGGGTCAAGTGAATGTCAAAGCCTTGGGTTAAATGGTTGAGGGTGGATATGCCAATACATTGGACAAAGAGGAGCATCGAGGCCTTGGGTTAAATGGTCAAGGGTCAGTTTGATAATCTTGAGGCAAGTGTTTGGGCCTTGAGCTAAATAGTCCATGGTCAATGTGCTAAGGAGAACAATGGAATATCATGGGCTCTAGTTAAATTGTTGAGGGCTGGTATTGTTCTAAGGCAAGTAAGTGAGTATCAAGGCTACGGGTGAAATGGTCAAGGGTTGTAATGTCACTATTGGGTGTTGAGGTCTTGAGTTAGATGGTTGGGGGTTGATACACCAATATTAGATAAAGAGGACCATTGAGACCTTGGGTTAGATGGTCAAAGGTGTGTGTGATGAGTCTGAAGACAAGTGTTGAGTGGTCAAGGGTCAATTCGTTGTCAATTGTTGTGTGGCCTTGGGTTAAATGGTCATGGGTCAAACATTGAGTTCTATAGAGAAATGTTGAGAGAAATTAGCTTGTGAAGAGCTAACAATCGTGAGGACTCAGTAGAATGTGAGTGAGCCCGTTGACCTTGAGTTAGAGGATGGGCTTGTTAGACTTAGAGTACTAATAAGGGATATTTTGGGAATATTAGTAGGATAGTAGTAAGGGCATAGTGGTAATTAGATAGTGGTTGATTGGTTATAAATAAGGAAGGTGGGCACCTTCGGAGGGGAGATCATTTTGGTAAGTCAATCCATAGTAGGTTGATAATGCAATATAATTATCTATAGTATTTTCTTGTAATTTTTGTGTTTGGGTTCCTAAAAATTTGGTATCAGGGCACGCTCATCATGATATTAGAGAACTTGTTGGTGGTATAGAGGAATTTGGACTCAATGCGTTGAGGGCTTAAAAAATATTCAACCAACGCTAAAAGAAATGGAGAAGGGTTTGAGGACTTAATCACCAACGAATGGAAAGAGACCAGTGATAGTAATCAATGCAACGAAAAGGATAGAGATTAAGGAAAACCAAATTGAATCAAAGAAGAGCAACAAAATTGTTTAGAAACCATTAGATCACAAGCAGGGTTGAAGAATGGCAAGACGACGTTGTTCTTACTCCAGGGAAAATCAATCAACAAGGCGAGAGAGGAGGAAAGAGGAATCATTGATGGGCACATGTTCGGAAAAGCAACCAGGCAAGCACAGAGAGAACTCAGTGGTGGCCCAAAGAGGGAAAGGCGATGA

mRNA sequence

ATGTGCGGCATTCGTACGAAAACTACTATCTTTTGTCCCAAACATAAACTTGGAAAGGGGATAATTTTGTCAATTGCCCAATTAACTCTCCTCCTTTTCGTGTATCAGCCCCTCGTTTGGTTCAATCAACCGCCGCACCCTCCCACCTTCAGCCTTCCTACTCCGGCCATCCACGCGAGGCCTCTTGCGAGTCGCCAACGGCGGTGTAAGGCTAGGGGCTCTCCCTCTTCGTGCGACCCACGAAAAACCCGCGAGGTTTATTCTCTGGGGAGCAGCTGCGAAACCCTGCCACGTCACCAATTTCGGCAACAGCGCCTTGCGAACAGGGACGCTTCTACCCAAGAACCTAACTCGTGGCGGTTCCCGGCGACGCCTCCGTGTACAAACGGCGAAACCATTAGATCACAAGCAGGGTTGAAGAATGGCAAGACGACGTTGTTCTTACTCCAGGGAAAATCAATCAACAAGGCGAGAGAGGAGGAAAGAGGAATCATTGATGGGCACATGTTCGGAAAAGCAACCAGGCAAGCACAGAGAGAACTCAGTGGTGGCCCAAAGAGGGAAAGGCGATGA

Coding sequence (CDS)

ATGTGCGGCATTCGTACGAAAACTACTATCTTTTGTCCCAAACATAAACTTGGAAAGGGGATAATTTTGTCAATTGCCCAATTAACTCTCCTCCTTTTCGTGTATCAGCCCCTCGTTTGGTTCAATCAACCGCCGCACCCTCCCACCTTCAGCCTTCCTACTCCGGCCATCCACGCGAGGCCTCTTGCGAGTCGCCAACGGCGGTGTAAGGCTAGGGGCTCTCCCTCTTCGTGCGACCCACGAAAAACCCGCGAGGTTTATTCTCTGGGGAGCAGCTGCGAAACCCTGCCACGTCACCAATTTCGGCAACAGCGCCTTGCGAACAGGGACGCTTCTACCCAAGAACCTAACTCGTGGCGGTTCCCGGCGACGCCTCCGTGTACAAACGGCGAAACCATTAGATCACAAGCAGGGTTGAAGAATGGCAAGACGACGTTGTTCTTACTCCAGGGAAAATCAATCAACAAGGCGAGAGAGGAGGAAAGAGGAATCATTGATGGGCACATGTTCGGAAAAGCAACCAGGCAAGCACAGAGAGAACTCAGTGGTGGCCCAAAGAGGGAAAGGCGATGA

Protein sequence

MCGIRTKTTIFCPKHKLGKGIILSIAQLTLLLFVYQPLVWFNQPPHPPTFSLPTPAIHARPLASRQRRCKARGSPSSCDPRKTREVYSLGSSCETLPRHQFRQQRLANRDASTQEPNSWRFPATPPCTNGETIRSQAGLKNGKTTLFLLQGKSINKAREEERGIIDGHMFGKATRQAQRELSGGPKRERR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G060920.1CcUC04G060920.1mRNA