CcUC04G060370 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGTAGTGGAAGTAGGGTTGCAAGAGGAAGATGGAAGAATAGAAAGATTTGTGGTTCCCATATCATATTTATATCACCCTTTATTCAAGAAGCTCTTGGACAAAGCTCAAGAAATCTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTCGGTTGACGACTTTCTCCAGCTCCGGTGGCGGATTGAGAAAGAATCTGATCAAAACAACGAGAAACAAAATCACCACCACCATCGCCATCACTACCACCACTATCACCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGA ATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGTAGTGGAAGTAGGGTTGCAAGAGGAAGATGGAAGAATAGAAAGATTTGTGGTTCCCATATCATATTTATATCACCCTTTATTCAAGAAGCTCTTGGACAAAGCTCAAGAAATCTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTCGGTTGACGACTTTCTCCAGCTCCGGTGGCGGATTGAGAAAGAATCTGATCAAAACAACGAGAAACAAAATCACCACCACCATCGCCATCACTACCACCACTATCACCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGA ATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGTAGTGGAAGTAGGGTTGCAAGAGGAAGATGGAAGAATAGAAAGATTTGTGGTTCCCATATCATATTTATATCACCCTTTATTCAAGAAGCTCTTGGACAAAGCTCAAGAAATCTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCGTGCTCGGTTGACGACTTTCTCCAGCTCCGGTGGCGGATTGAGAAAGAATCTGATCAAAACAACGAGAAACAAAATCACCACCACCATCGCCATCACTACCACCACTATCACCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGA MPEKKKMKVKKGWLVVEVGLQEEDGRIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQNNEKQNHHHHRHHYHHYHLPLALSFQSC Homology
BLAST of CcUC04G060370 vs. NCBI nr
Match: KGN54862.1 (hypothetical protein Csa_012431 [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 1.9e-50 Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of CcUC04G060370 vs. NCBI nr
Match: KAG6603262.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207.2 bits (526), Expect = 7.2e-50 Identity = 100/113 (88.50%), Postives = 108/113 (95.58%), Query Frame = 0
BLAST of CcUC04G060370 vs. NCBI nr
Match: KAG6603263.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49 Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of CcUC04G060370 vs. NCBI nr
Match: XP_022154927.1 (auxin-responsive protein SAUR32-like [Momordica charantia]) HSP 1 Score: 198.7 bits (504), Expect = 2.6e-47 Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of CcUC04G060370 vs. NCBI nr
Match: KAF3972041.1 (hypothetical protein CMV_004413 [Castanea mollissima]) HSP 1 Score: 168.3 bits (425), Expect = 3.7e-38 Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-11 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.4e-09 Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.4e-08 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy TrEMBL
Match: A0A0A0L2M8 (SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_4G556180 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.2e-51 Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy TrEMBL
Match: A0A6J1DN07 (auxin-responsive protein SAUR32-like OS=Momordica charantia OX=3673 GN=LOC111022073 PE=3 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47 Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy TrEMBL
Match: A0A7N2MR82 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38 Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy TrEMBL
Match: A0A2N9INR0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53816 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.0e-38 Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 0
BLAST of CcUC04G060370 vs. ExPASy TrEMBL
Match: A0A2I4DN05 (auxin-induced protein 6B-like OS=Juglans regia OX=51240 GN=LOC108981711 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.9e-38 Identity = 80/111 (72.07%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of CcUC04G060370 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 75.9 bits (185), Expect = 2.3e-14 Identity = 35/94 (37.23%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of CcUC04G060370 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 72.4 bits (176), Expect = 2.6e-13 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of CcUC04G060370 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 69.7 bits (169), Expect = 1.7e-12 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CcUC04G060370 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of CcUC04G060370 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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