CcUC04G059950 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G059950
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	receptor-like kinase
Location	CicolChr04: 2241230 .. 2242287 (-)
RNA-Seq Expression	CcUC04G059950
Synteny	CcUC04G059950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTTCCCATCCTCTTTATCCATTAACATCACATGGTCAGTGTCCCTTTCTTCAACTAAAACAAATGGCCCTTCATTTTTCCCTCTTGTTATTCTTTTGTATACATTATGATTCATATTTCCCAAATGCAAAATTGTAAACTACTTTCATTCTACACCTATAAATTATATAGTGTTCCTCTGAACCTGCCTTCAATTTTGACCCTTTTGAGTGGGATGTAAAACCACCAACATGAATATATCTCAAGTGATTAAGATGTTCGAGAAAAGGTTAGCATTGCTTCTAATTACAAAACAACTGCAATGCAACTGATCTACCAAAAATTGGCCCTTTCTGTTTCTTGTATAAGGTGTGTGAACCATAATACCTAACTTTCCAATAGTAGTATATATATTATAACTCGTGTTCATGTTGGTTAACTTTTTGTATTTATTACATATTTCGGTCTTGAATTTTATGTTTTGCTTAGATTAAGTAGAGGCAAATCAATAATTATTTAGCCAAAAAGAACATTAGGACTGAATTACTTTAAAAGACACTATACAATATATTAACCAAAAGCTTTATACTTCAGTCCAACTAAACTAACATGAAAAGAAAAAGGAAAGTAAGGATAAGTATAGTTATGTATGTTACAAAATTTGCAATTGTGCAAAGTATTAGTATTTTATTAATATATTCGTGGTCTATTTTATTAATCTCATTTGGGAGACGATCCTAGATCAGATTTCTCTGTTAGGTTCTTAGTGAATGCTTGATTTTGGGAAGAATCACATTGAAGGGAAGCTTCCTGAGGGCGTTGGGGCTTTGAAGAATCTTCAAATTCTCAATCTCAGAAGCAACTTGATTTCTGGTACAGTGTTTTCTGTTGCCTTCCATAATCTGACTGAACTTCTTGTTGTTGATTTGTCAGAAAATTCTCATTTGTTGAGTGATATTCTTAGTGAGATTGGGAAGCTTGAGAAGCTTGAGAAGCTTAAGAAGCTATGGCTTTACAACTCTGGTTTCTATGGTGAAATCCCTTCTTCCCACCTTCTTCTTTGTTGGGTTTGA

mRNA sequence

ATGCTTCCTTCCCATCCTCTTTATCCATTAACATCACATGTGCTTGATTTTGGGAAGAATCACATTGAAGGGAAGCTTCCTGAGGGCGTTGGGGCTTTGAAGAATCTTCAAATTCTCAATCTCAGAAGCAACTTGATTTCTGGTACAGTGTTTTCTGTTGCCTTCCATAATCTGACTGAACTTCTTGTTGTTGATTTGTCAGAAAATTCTCATTTGTTGAGTGATATTCTTAGTGAGATTGGGAAGCTTGAGAAGCTTGAGAAGCTTAAGAAGCTATGGCTTTACAACTCTGGTTTCTATGGTGAAATCCCTTCTTCCCACCTTCTTCTTTGTTGGGTTTGA

Coding sequence (CDS)

ATGCTTCCTTCCCATCCTCTTTATCCATTAACATCACATGTGCTTGATTTTGGGAAGAATCACATTGAAGGGAAGCTTCCTGAGGGCGTTGGGGCTTTGAAGAATCTTCAAATTCTCAATCTCAGAAGCAACTTGATTTCTGGTACAGTGTTTTCTGTTGCCTTCCATAATCTGACTGAACTTCTTGTTGTTGATTTGTCAGAAAATTCTCATTTGTTGAGTGATATTCTTAGTGAGATTGGGAAGCTTGAGAAGCTTGAGAAGCTTAAGAAGCTATGGCTTTACAACTCTGGTTTCTATGGTGAAATCCCTTCTTCCCACCTTCTTCTTTGTTGGGTTTGA

Protein sequence

MLPSHPLYPLTSHVLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLLSDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHLLLCWV

Homology

[Close]

BLAST of CcUC04G059950 vs. NCBI nr
Match: XP_038880868.1 (probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32
Identity = 79/95 (83.16%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNHIEGK+PEG+GALKNLQILNLRSNLISGTV SV FHNLT+LL+VDLSENS+LL
Sbjct: 147 VLDFGKNHIEGKIPEGIGALKNLQILNLRSNLISGTVPSVVFHNLTDLLIVDLSENSYLL 206

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           SDI SEIGKLEKLE    L L++SGFYGEIPSS L
Sbjct: 207 SDIPSEIGKLEKLE---VLLLHSSGFYGEIPSSLL 238

[Close]

BLAST of CcUC04G059950 vs. NCBI nr
Match: TYK29844.1 (putative inactive leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-32
Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNHIEGK+PEG+GALK LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 148 VLDFGKNHIEGKIPEGIGALKTLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 207

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 208 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 239

[Close]

BLAST of CcUC04G059950 vs. NCBI nr
Match: XP_004144659.2 (probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-32
Identity = 77/95 (81.05%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNH+EGK+PEG+GALK+LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 166 VLDFGKNHVEGKIPEGIGALKSLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 225

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 226 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 257

[Close]

BLAST of CcUC04G059950 vs. NCBI nr
Match: KAE8649768.1 (hypothetical protein Csa_012284 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-32
Identity = 77/95 (81.05%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNH+EGK+PEG+GALK+LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 148 VLDFGKNHVEGKIPEGIGALKSLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 207

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 208 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 239

[Close]

BLAST of CcUC04G059950 vs. NCBI nr
Match: XP_008442262.1 (PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Cucumis melo] >KAA0035773.1 putative inactive leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-32
Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNHIEGK+PEG+GALK LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 148 VLDFGKNHIEGKIPEGIGALKTLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 207

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 208 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 239

[Close]

BLAST of CcUC04G059950 vs. ExPASy Swiss-Prot
Match: Q9FL51 (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana OX=3702 GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.7e-20
Identity = 53/93 (56.99%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           V+DF  NH+EG +PE +G L NLQ+LNL SNL++G V   A   L+EL+V+DLSENS+L+
Sbjct: 151 VIDFSSNHVEGMIPEDLGLLFNLQVLNLGSNLLTGIV-PPAIGKLSELVVLDLSENSYLV 210

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSS 107
           S+I S +GKL+KLE   +L L+ SGF+GEIP+S
Sbjct: 211 SEIPSFLGKLDKLE---QLLLHRSGFHGEIPTS 239

[Close]

BLAST of CcUC04G059950 vs. ExPASy Swiss-Prot
Match: Q9C637 (Receptor-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=RLP6 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-08
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           V+DF  N I+GK+PE VG LK L +LNL SN  +G + S +  NLT L  +D+S+N  + 
Sbjct: 808 VIDFAGNKIQGKIPESVGILKELHVLNLSSNAFTGHIPS-SLANLTNLESLDISQNK-IG 867

Query: 74  SDILSEIGKLEKLE 88
            +I  E+G L  LE
Sbjct: 868 GEIPPELGTLSSLE 879

[Close]

BLAST of CcUC04G059950 vs. ExPASy Swiss-Prot
Match: Q9M0G7 (MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.4e-08
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 11  TSHVLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENS 70
           T  VLDF  N + G++P  +  LKNLQ+LNL  N +SG++   A  +L +L V++L  N+
Sbjct: 285 TLKVLDFSDNALTGEIPMEITKLKNLQLLNLMRNKLSGSI-PPAISSLAQLQVLELWNNT 344

Query: 71  HLLSDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSS 107
            L  ++ S++GK   L+ L    + ++ F GEIPS+
Sbjct: 345 -LSGELPSDLGKNSPLQWLD---VSSNSFSGEIPST 375

[Close]

BLAST of CcUC04G059950 vs. ExPASy Swiss-Prot
Match: Q0JA29 (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Oryza sativa subsp. japonica OX=39947 GN=FLS2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 15  LDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLLS 74
           LD   N + G +P  +G L +LQ L+L +N ++GTV   +  NL  L +++LSEN HL  
Sbjct: 319 LDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTV-PASLTNLVNLTILELSEN-HLSG 378

Query: 75  DILSEIGKLEKLEKLKKLWLYNSGFYGEIPSS 107
            + + IG    L  L++L + N+   G+IP+S
Sbjct: 379 PLPASIG---SLRNLRRLIVQNNSLSGQIPAS 405

[Close]

BLAST of CcUC04G059950 vs. ExPASy Swiss-Prot
Match: C0LGQ5 (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana OX=3702 GN=GSO1 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           ++D   NH EG++P  +G LK L +L+LR N + G +   +  N  +L ++DL++N  L 
Sbjct: 460 MIDMFGNHFEGEIPPSIGRLKELNLLHLRQNELVGGL-PASLGNCHQLNILDLADN-QLS 519

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHLLL 111
             I S  G L+ LE   +L LYN+   G +P S + L
Sbjct: 520 GSIPSSFGFLKGLE---QLMLYNNSLQGNLPDSLISL 551

[Close]

BLAST of CcUC04G059950 vs. ExPASy TrEMBL
Match: A0A5D3E1U6 (Putative inactive leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00820 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-32
Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNHIEGK+PEG+GALK LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 148 VLDFGKNHIEGKIPEGIGALKTLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 207

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 208 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 239

[Close]

BLAST of CcUC04G059950 vs. ExPASy TrEMBL
Match: A0A5A7SYT4 (Putative inactive leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00550 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-32
Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNHIEGK+PEG+GALK LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 148 VLDFGKNHIEGKIPEGIGALKTLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 207

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 208 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 239

[Close]

BLAST of CcUC04G059950 vs. ExPASy TrEMBL
Match: A0A0A0KZH8 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G572330 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-32
Identity = 77/95 (81.05%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNH+EGK+PEG+GALK+LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 166 VLDFGKNHVEGKIPEGIGALKSLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 225

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 226 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 257

[Close]

BLAST of CcUC04G059950 vs. ExPASy TrEMBL
Match: A0A1S3B622 (probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Cucumis melo OX=3656 GN=LOC103486170 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-32
Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNHIEGK+PEG+GALK LQILNLRSNLISGTV S+ FHNLTELLVVDLSENS+LL
Sbjct: 148 VLDFGKNHIEGKIPEGIGALKTLQILNLRSNLISGTVPSLVFHNLTELLVVDLSENSYLL 207

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           S+I SEIGKLEKLE   +L L++SGFYGEIPSS L
Sbjct: 208 SEIPSEIGKLEKLE---ELLLHSSGFYGEIPSSLL 239

[Close]

BLAST of CcUC04G059950 vs. ExPASy TrEMBL
Match: A0A6J1DCU8 (probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Momordica charantia OX=3673 GN=LOC111019576 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.4e-32
Identity = 77/95 (81.05%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           VLDFGKNHIEGK+PEG+GAL+NLQ LNLRSNLISG V SV F NLTELLVVDLSENS+LL
Sbjct: 145 VLDFGKNHIEGKIPEGIGALRNLQTLNLRSNLISGRVPSVVFRNLTELLVVDLSENSYLL 204

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHL 109
           SDI S+IGKLEKLE   +LWL +SGFYGEIPSS L
Sbjct: 205 SDIPSDIGKLEKLE---ELWLQSSGFYGEIPSSLL 236

[Close]

BLAST of CcUC04G059950 vs. TAIR 10
Match: AT5G06940.1 (Leucine-rich repeat receptor-like protein kinase family protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.6e-21
Identity = 53/93 (56.99%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           V+DF  NH+EG +PE +G L NLQ+LNL SNL++G V   A   L+EL+V+DLSENS+L+
Sbjct: 151 VIDFSSNHVEGMIPEDLGLLFNLQVLNLGSNLLTGIV-PPAIGKLSELVVLDLSENSYLV 210

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSS 107
           S+I S +GKL+KLE   +L L+ SGF+GEIP+S
Sbjct: 211 SEIPSFLGKLDKLE---QLLLHRSGFHGEIPTS 239

[Close]

BLAST of CcUC04G059950 vs. TAIR 10
Match: AT1G45616.1 (receptor like protein 6 )

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-09
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           V+DF  N I+GK+PE VG LK L +LNL SN  +G + S +  NLT L  +D+S+N  + 
Sbjct: 808 VIDFAGNKIQGKIPESVGILKELHVLNLSSNAFTGHIPS-SLANLTNLESLDISQNK-IG 867

Query: 74  SDILSEIGKLEKLE 88
            +I  E+G L  LE
Sbjct: 868 GEIPPELGTLSSLE 879

[Close]

BLAST of CcUC04G059950 vs. TAIR 10
Match: AT4G28650.1 (Leucine-rich repeat transmembrane protein kinase family protein )

HSP 1 Score: 57.8 bits (138), Expect = 6.7e-09
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 11  TSHVLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENS 70
           T  VLDF  N + G++P  +  LKNLQ+LNL  N +SG++   A  +L +L V++L  N+
Sbjct: 285 TLKVLDFSDNALTGEIPMEITKLKNLQLLNLMRNKLSGSI-PPAISSLAQLQVLELWNNT 344

Query: 71  HLLSDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSS 107
            L  ++ S++GK   L+ L    + ++ F GEIPS+
Sbjct: 345 -LSGELPSDLGKNSPLQWLD---VSSNSFSGEIPST 375

[Close]

BLAST of CcUC04G059950 vs. TAIR 10
Match: AT1G68780.1 (RNI-like superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 15  LDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLLS 74
           LD   N++EGKLP  + +LKNL +L+LR+N +SG + S     +T L+ + LS N+ L  
Sbjct: 248 LDLSNNYLEGKLPRELESLKNLTLLDLRNNRLSGGL-SKEIQEMTSLVELVLS-NNRLAG 307

Query: 75  DILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHLLL 111
           D+     K   L+ L  L L N+G  GEIP S L L
Sbjct: 308 DLTGI--KWRNLKNLVVLDLSNTGLKGEIPGSILEL 339

[Close]

BLAST of CcUC04G059950 vs. TAIR 10
Match: AT4G20140.1 (Leucine-rich repeat transmembrane protein kinase )

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-08
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 14  VLDFGKNHIEGKLPEGVGALKNLQILNLRSNLISGTVFSVAFHNLTELLVVDLSENSHLL 73
           ++D   NH EG++P  +G LK L +L+LR N + G +   +  N  +L ++DL++N  L 
Sbjct: 460 MIDMFGNHFEGEIPPSIGRLKELNLLHLRQNELVGGL-PASLGNCHQLNILDLADN-QLS 519

Query: 74  SDILSEIGKLEKLEKLKKLWLYNSGFYGEIPSSHLLL 111
             I S  G L+ LE   +L LYN+   G +P S + L
Sbjct: 520 GSIPSSFGFLKGLE---QLMLYNNSLQGNLPDSLISL 551

The following BLAST results are available for this feature:

BLAST of CcUC04G059950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880868.1	1.8e-32	83.16	probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Be...	[more]
TYK29844.1	9.0e-32	82.11	putative inactive leucine-rich repeat receptor-like protein kinase [Cucumis melo...	[more]
XP_004144659.2	9.0e-32	81.05	probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Cu...	[more]
KAE8649768.1	9.0e-32	81.05	hypothetical protein Csa_012284 [Cucumis sativus]	[more]
XP_008442262.1	9.0e-32	82.11	PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At...	[more]

BLAST of CcUC04G059950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL51	3.7e-20	56.99	Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=...	[more]
Q9C637	5.5e-08	45.95	Receptor-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=RLP6 PE=3 SV=1	[more]
Q9M0G7	9.4e-08	38.54	MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1...	[more]
Q0JA29	2.7e-07	36.96	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Oryza sativa subsp. ja...	[more]
C0LGQ5	2.7e-07	36.08	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana O...	[more]

BLAST of CcUC04G059950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1U6	4.4e-32	82.11	Putative inactive leucine-rich repeat receptor-like protein kinase OS=Cucumis me...	[more]
A0A5A7SYT4	4.4e-32	82.11	Putative inactive leucine-rich repeat receptor-like protein kinase OS=Cucumis me...	[more]
A0A0A0KZH8	4.4e-32	81.05	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G572...	[more]
A0A1S3B622	4.4e-32	82.11	probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=...	[more]
A0A6J1DCU8	7.4e-32	81.05	probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=...	[more]

BLAST of CcUC04G059950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06940.1	2.6e-21	56.99	Leucine-rich repeat receptor-like protein kinase family protein	[more]
AT1G45616.1	3.9e-09	45.95	receptor like protein 6	[more]
AT4G28650.1	6.7e-09	38.54	Leucine-rich repeat transmembrane protein kinase family protein	[more]
AT1G68780.1	1.1e-08	41.67	RNI-like superfamily protein	[more]
AT4G20140.1	1.9e-08	36.08	Leucine-rich repeat transmembrane protein kinase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 5..111 e-value: 2.5E-16 score: 61.0
None	No IPR available	PANTHER	PTHR48056	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	coord: 13..108
None	No IPR available	PANTHER	PTHR48056:SF31	SUBFAMILY NOT NAMED	coord: 13..108
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 14..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G059950.1	CcUC04G059950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0033612	receptor serine/threonine kinase binding