CcUC04G059770 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G059770
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ras-related protein RABA4d
Location	CicolChr04: 1430212 .. 1434211 (-)
RNA-Seq Expression	CcUC04G059770
Synteny	CcUC04G059770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATCTATATGGGGATTATAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTAGGCAAAACCCAACTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCCGGACAAGAAAGGTTTGTGCCCTTTCTTTTTATTTTCTTTTTGTGGGGTTCATTGGTTTTTGTTTTCTTTCTCATGGAGACGACTTCATTGTTCAAGGGGTTTGGATCTGTGATAGCTTGTGAAATGGTAAAATCCAAATGTGCTTTTGAGCTTTTGTGATAATTACTAGGTTTAATGAAATGAATGAATGTATGATAGAAGATAGAATTAGACAGCAAGGAGTTTGGAATCCTCTAATGGAATTATGACTTGTTTGTTCTTGCCTGTTCTCTGTACTTTTAAATCCACAGAGGATGCAGATACCCTATTGGTGTTTGAATGCAGTTGTTGTGATTGGAATTGTGTTGGGGTAAAAGTTTTAACTCAACTTTTTTAAATTGGCCTAGTCTACTCTCAATTGTAGTGTTTGGATTGGAAGGAATGTCCGTAGTGGTGAAAAACCAAGCCTTGGGAGGATATCATCTGAAGAAGTAAAACATGGTGTTAGACAATGATGTCTAGTTGAGATTGTTTCTCACTCATTTTAGAGTTGTCCTTAGGTAGATTTCCTCCTCGGCTTACATTGTTGATATTAGGTTTTGCTGTTTAAATCATATTTAGCTGCAGCTTTGGTGCAATCTGTGCGTTTCAGATTAAATGAAATTATTGTGATAGGATTAGTAAGCCATAGGTTTGTCATACATATGCTCAGGAAAGAATGAGAGAATGAGTTGCTAGAAGAAAGCTAATGTGAAGGTGAAGGGTGCGAGTTATGTCCAATGGAGATAGTTTGGAGTAGTGTGGCCCATCAATGAGAATGCATGTAAAAGGAGAGAGAGGTAAAGCATAAATTTGATTTAAAGAAGATGAAAGAAGATGGGAGAGTTTTCAAAAAGATGAGCGAGTCAGGGAGAGTTGGAGGCATCTCTCAAGGTTGCAACATTTTGTAGTTTGGTTCAGAAGATTACTACAAAAGCGCCTTTACCAATTCAAAATTTCGATGATTAGAGCATTTTCTCAGGGATTCCTAAAGTGAAAAAATTGTAATTTGGGTTGGGTGTTGGAAAGCCCTAAATACTTGGGTGATAGAAAAGAATACTGTCCTTTTGTCGATGGGATAAATAAATTGCTGCGGTAAAAGGGATGAGTAACAATTGGTGATGAATAAAGACATTCTTGATAAGGGTAAGGTGATTGTTGAAGAGTCGAATGAAGGTGAGATTAGTAAGACGGTGAGGAGGGAGACAATCATCACCTACACCGAAGAAAGGAAAGAGCGAGATGGATGGATGAATCTTTCAAGCCAAAGGCTATTTCAAGATTATTCAGCAAAATGGATGCAAGTTCTGGAGATCAATATGGTGAGAGAGGGTCTTGCTTGGTATTTGTTTGATGGAGAGTCATCAATCTTTCTGGCGCAAGGTGAAGTTCAAGCTGGTGATGATTGCTCGATTTTTTAATTGCAGTAAAGTACACTATATGAGCATTTATTATCTTTCCAACTCGAGGGCAGCTTGCGTCAGTACAGGAAGATGTTGGAAATTCTGACTGATGCTGAGTTGCATCAGTGCAGAAAGTTGGGTGTATGTTTTCGGTGCGAGCTATGGATAGTTGGTATGCCACTTAGTAAGAACAAGGAGTTGAAAACCTTTTTTAATCCAGGACAATAAGAAAGAGTACTATCGTCAGGGCCAGGGATGTATGGCTACCCCATTTCAGCTACTGTATTGCAAACCTCCGCCTTCATTGGTGTACAACCTTCTGTCATCACGGACCAAACTCTTACAAAACTATTATGATTAATTCTTTGGATGATATTAAGTTTTACCTCATCCAGGAGCAGCAGGATTATGAAGGATAATGCCAACAACCGCAGATAAGACATTACTTTTAAGATTTGGGACATGACATTCTTACTAAACCTGAAGCCACTAAATAATTTCTTATGTCATTTCTTCCCCATCCCTCTACTTATAATGAATCCCTGCTATCAAACTCCTTAGCAATTACTGAGGGTTTATTTGGTAAGTGATCCAAAAACAAGAGACTCAATGAATAACAAAGTTGTATTTCAAGTTTTCAATGTTTTCAAACATGCAATTAGTCCTTGATTTAGAAACTGTATCTCAATTTTAAACGTTGTTCAAAGTGGGTTTGGTAATATATTTATAAACAAAAGCTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATTCTAGGGAGAGGATGAAAGGATGGAGTAACCATTACAAAGCTAATCATAAAGAGTGTGAGTTATGAAGGGCCTAGCTAGTTAGGAGTAGCAGGGGCAGGTGCACTTTTCGCAATTTCATTAGAAGCGAAAGGGAAGAGTTATGGAAAAGCTGAGGGAAATTGAGGAAAGTTGTGAACCTCTCTAAAGTTTCACTACCTTAAATACTTTTGTTTTGCATGAAGAAAATGTGGAAAGATGATTATCCATTTGTCAACTTTTTCTGGCTTTGATACACATAATTAAATCTCTTCAGTTAGATTTGAGAACAAGTAATGATATCTTGGATCCAATCAATAATCTAGTAGTCATTACCTTTTTGTCCGACTTCCTTGCAATTGATGTATGACATTGCTAGAATCTTTGTATTATCACTCAAACAAAATATTGTATTTTTAAGTTCATCTCCTCTTAAATTCATAATTGAACAGCCTCTTTGTTGTATGATTATCAGACATTAAACAAGTTTGGCATGTGGAATGCTAGGAGTCTGTGGTATCAACAATTTAGTATTTGTATTTAAGGCTCATATTGTAATATTTTCCATTTGGTTGCTGATATCAAAACTGACTTATGAAACATTCTGCTTTACATATTTCATTCGGTGTTTGTCAATTTTGACAATGGATCCAACATTGTATCTGATGAAATAGCACACGTGAATTTGACGTTGTTATGTACTTAATTCGTGAATATTGCTGTTAAGCTGGCTATAGTTTCTGAAACTATGTCATTTTTCACATTGCCAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGATCACATGGCAAGGTGGCTGGAGGAACTAAGAGGACATGCTGACAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGACTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGGGCTGTTTAAAGGAACTAGTATAATTGTTCCCGGACAGGACCAGGATTCTGGGAGAAAAGGATGTTGCTTTGCCTCATGA

mRNA sequence

ATGTCGAATCTATATGGGGATTATAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTAGGCAAAACCCAACTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCCGGACAAGAAAGGTTTGTGCCCTTTCTTTTTATTTTCTTTTTGTGGGGTTCATTGGTTTTTGTTTTCTTTCTCATGGAGACGACTTCATTGTTCAAGGGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGATCACATGGCAAGGTGGCTGGAGGAACTAAGAGGACATGCTGACAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGACTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGGGCTGTTTAAAGGAACTAGTATAATTGTTCCCGGACAGGACCAGGATTCTGGGAGAAAAGGATGTTGCTTTGCCTCATGA

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTAGGCAAAACCCAACTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCCGGACAAGAAAGGTTTGTGCCCTTTCTTTTTATTTTCTTTTTGTGGGGTTCATTGGTTTTTGTTTTCTTTCTCATGGAGACGACTTCATTGTTCAAGGGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGATCACATGGCAAGGTGGCTGGAGGAACTAAGAGGACATGCTGACAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGACTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGGGCTGTTTAAAGGAACTAGTATAATTGTTCCCGGACAGGACCAGGATTCTGGGAGAAAAGGATGTTGCTTTGCCTCATGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQDQDSGRKGCCFAS

Homology

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BLAST of CcUC04G059770 vs. NCBI nr
Match: XP_038881448.1 (ras-related protein RABA4d [Benincasa hispida])

HSP 1 Score: 427.2 bits (1097), Expect = 1.0e-115
Identity = 221/252 (87.70%), Postives = 223/252 (88.49%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTNIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSGRKGCCFAS
Sbjct: 241 QDSGRKGCCFAS 223

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BLAST of CcUC04G059770 vs. NCBI nr
Match: XP_004150166.1 (ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Csa_014745 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 2.2e-115
Identity = 221/252 (87.70%), Postives = 222/252 (88.10%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKGTSI+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTSIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSGRKGCCFAS
Sbjct: 241 QDSGRKGCCFAS 223

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BLAST of CcUC04G059770 vs. NCBI nr
Match: XP_008460801.1 (PREDICTED: ras-related protein RABA4d [Cucumis melo] >KAA0053214.1 ras-related protein RABA4d [Cucumis melo var. makuwa])

HSP 1 Score: 422.5 bits (1085), Expect = 2.5e-114
Identity = 219/252 (86.90%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTNIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSG KGCCFAS
Sbjct: 241 QDSGTKGCCFAS 223

[Close]

BLAST of CcUC04G059770 vs. NCBI nr
Match: XP_022925137.1 (ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related protein RABA4d [Cucurbita pepo subsp. pepo] >KAG7027618.1 Ras-related protein RABA4d [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.5 bits (1059), Expect = 2.6e-111
Identity = 214/252 (84.92%), Postives = 217/252 (86.11%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFF ILTEIYRIISKKSLAAGE IDIG NP LFKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGESIDIGVNPALFKGTNIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           Q  GRKGCCFAS
Sbjct: 241 QAGGRKGCCFAS 223

[Close]

BLAST of CcUC04G059770 vs. NCBI nr
Match: XP_022151622.1 (ras-related protein RABA4d-like [Momordica charantia])

HSP 1 Score: 411.8 bits (1057), Expect = 4.4e-111
Identity = 215/252 (85.32%), Postives = 219/252 (86.90%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKK+LAAGEEIDIG  PG FKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKTLAAGEEIDIG-GPGHFKGTNIVVPGQD 222

Query: 241 QDSGRKGCCFAS 253
            DSGRKGCCFAS
Sbjct: 241 SDSGRKGCCFAS 222

[Close]

BLAST of CcUC04G059770 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.3e-101
Identity = 193/249 (77.51%), Postives = 202/249 (81.12%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  NKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMA+WLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALE+TNVETAF TILTEIYRIISKKSL A ++ D   N  L KGT II+P + 
Sbjct: 181 LFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD-DADGNSSLLKGTRIIIPSEQ 219

Query: 241 QDSGRKGCC 250
           +   R GCC
Sbjct: 241 ESGKRGGCC 219

[Close]

BLAST of CcUC04G059770 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.8e-92
Identity = 174/252 (69.05%), Postives = 199/252 (78.97%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           +KT+KAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  RKTIKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYD+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK DLG+LRAVPTEDA+EFA+REN
Sbjct: 121 MLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSAL+S NVE +F T+LTEIYRI+SKK+L A EE + G +  L +GT I+V G++
Sbjct: 181 LFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESGGDSSLLQGTKIVVAGEE 223

Query: 241 QDSGRKGCCFAS 253
            +S  KGCC  S
Sbjct: 241 TESKGKGCCGTS 223

[Close]

BLAST of CcUC04G059770 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 339.0 bits (868), Expect = 4.7e-92
Identity = 176/248 (70.97%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 68  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 127

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           D+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK DLG+LR VPTEDA+EFAERENLFFM
Sbjct: 128 DITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFM 187

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQDQDSG 244
           ETSALESTNVE AF T+LTEIYRI+SKK+L A EE+D   N  L KGT I+VPGQ+    
Sbjct: 188 ETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPP 226

Query: 245 RKGCCFAS 253
            K  C  S
Sbjct: 248 TKASCCMS 226

[Close]

BLAST of CcUC04G059770 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.2e-84
Identity = 167/250 (66.80%), Postives = 191/250 (76.40%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 67  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 126

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           D+TKRQ+FDH+ RWLEELR HADKNIVI+LIGNKCDL + R VPTEDA+EFAE+E LFF+
Sbjct: 127 DITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFL 186

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQDQD-- 244
           ETSALE+TNVE+AF T+LTEIY I++KKSLAA E    G++  L  G  II+PG  Q+  
Sbjct: 187 ETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASL-SGQKIIIPGPAQEIP 226

Query: 245 SGRKGCCFAS 253
           + R  CC AS
Sbjct: 247 AKRNMCCQAS 226

[Close]

BLAST of CcUC04G059770 vs. ExPASy Swiss-Prot
Match: Q40520 (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 7.5e-82
Identity = 161/250 (64.40%), Postives = 188/250 (75.20%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+LARF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            K+VKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  HKSVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYD+TKRQ+FDH+ RWLEELR HAD+NIVIML GNK DL   RAVPTEDA+EFA++E 
Sbjct: 121 MLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEG 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFF+ETSA+E+T +E AF T+LTEI+ I++KK+LAA +E    SNP    G  I+VPG  
Sbjct: 181 LFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAA-DENQSNSNPASLTGKKILVPGPG 220

Query: 241 Q-DSGRKGCC 250
           Q   G+K CC
Sbjct: 241 QVIPGKKACC 220

[Close]

BLAST of CcUC04G059770 vs. ExPASy TrEMBL
Match: A0A0A0KW90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 221/252 (87.70%), Postives = 222/252 (88.10%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKGTSI+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTSIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSGRKGCCFAS
Sbjct: 241 QDSGRKGCCFAS 223

[Close]

BLAST of CcUC04G059770 vs. ExPASy TrEMBL
Match: A0A5A7UD85 (Ras-related protein RABA4d OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00440 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.2e-114
Identity = 219/252 (86.90%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTNIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSG KGCCFAS
Sbjct: 241 QDSGTKGCCFAS 223

[Close]

BLAST of CcUC04G059770 vs. ExPASy TrEMBL
Match: A0A1S3CDP9 (ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.2e-114
Identity = 219/252 (86.90%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTNIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSG KGCCFAS
Sbjct: 241 QDSGTKGCCFAS 223

[Close]

BLAST of CcUC04G059770 vs. ExPASy TrEMBL
Match: A0A6J1EAZ2 (ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.2e-111
Identity = 214/252 (84.92%), Postives = 217/252 (86.11%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFF ILTEIYRIISKKSLAAGE IDIG NP LFKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGESIDIGVNPALFKGTNIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           Q  GRKGCCFAS
Sbjct: 241 QAGGRKGCCFAS 223

[Close]

BLAST of CcUC04G059770 vs. ExPASy TrEMBL
Match: A0A6J1DE05 (ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111019535 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.1e-111
Identity = 215/252 (85.32%), Postives = 219/252 (86.90%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKK+LAAGEEIDIG  PG FKGT+I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKTLAAGEEIDIG-GPGHFKGTNIVVPGQD 222

Query: 241 QDSGRKGCCFAS 253
            DSGRKGCCFAS
Sbjct: 241 SDSGRKGCCFAS 222

[Close]

BLAST of CcUC04G059770 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 369.0 bits (946), Expect = 3.0e-102
Identity = 193/249 (77.51%), Postives = 202/249 (81.12%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  NKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMA+WLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSALE+TNVETAF TILTEIYRIISKKSL A ++ D   N  L KGT II+P + 
Sbjct: 181 LFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD-DADGNSSLLKGTRIIIPSEQ 219

Query: 241 QDSGRKGCC 250
           +   R GCC
Sbjct: 241 ESGKRGGCC 219

[Close]

BLAST of CcUC04G059770 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 339.7 bits (870), Expect = 2.0e-93
Identity = 174/252 (69.05%), Postives = 199/252 (78.97%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           +KT+KAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  RKTIKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYD+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK DLG+LRAVPTEDA+EFA+REN
Sbjct: 121 MLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQD 240
           LFFMETSAL+S NVE +F T+LTEIYRI+SKK+L A EE + G +  L +GT I+V G++
Sbjct: 181 LFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESGGDSSLLQGTKIVVAGEE 223

Query: 241 QDSGRKGCCFAS 253
            +S  KGCC  S
Sbjct: 241 TESKGKGCCGTS 223

[Close]

BLAST of CcUC04G059770 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 298.9 bits (764), Expect = 3.8e-81
Identity = 161/248 (64.92%), Postives = 187/248 (75.40%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 67  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 126

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           D+T+RQ+FDH+ RWLEELR HADKNIVI+LIGNK DL   RA+PTEDA+EFAE+E LFF+
Sbjct: 127 DITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFL 186

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSI-IVPGQDQDS 244
           ETSA  +TNVE+AF T+LTEI+ I++KKSLAA E+ + G NPG   G  I IVPG  Q  
Sbjct: 187 ETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQENG-NPGSLAGKKIDIVPGPGQVI 224

Query: 245 GRKG--CC 250
             K   CC
Sbjct: 247 PNKSNMCC 224

[Close]

BLAST of CcUC04G059770 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 290.0 bits (741), Expect = 1.8e-78
Identity = 152/250 (60.80%), Postives = 185/250 (74.00%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLLARF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 67  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 126

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           DMTKR++F+H+ RWLEELR HADKNIVI+LIGNK DL   RAVPTEDA+EFAE+E LFF+
Sbjct: 127 DMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFL 186

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQDQDSG 244
           ETSAL +TNVE +F T++T+IY  ++KK+LA+  +    +NPG   G  I++PG  Q+  
Sbjct: 187 ETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD---SNNPGSLAGKKILIPGSGQEIP 224

Query: 245 RK--GCCFAS 253
            K   CC +S
Sbjct: 247 AKTSTCCTSS 224

[Close]

BLAST of CcUC04G059770 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-68
Identity = 133/244 (54.51%), Postives = 175/244 (71.72%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
           +++ DY+FKVVLIGDS VGK+ LL+RF+RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 69  WDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVYDMTK 128
           WDTAGQER                             YRA+TSAYYRGA+GA+LVYD+TK
Sbjct: 66  WDTAGQER-----------------------------YRAITSAYYRGALGALLVYDVTK 125

Query: 129 RQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSA 188
             +F++++RWL+ELR HAD NIVIMLIGNK DL  LRAV TEDAQ +AE+E L F+ETSA
Sbjct: 126 PTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSA 185

Query: 189 LESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGTSIIVPGQDQDSGRKGC 248
           LE+ NVE AF TIL+E+YRIISKKS+++ +     +N  + +G +I V    + + +K C
Sbjct: 186 LEALNVEKAFQTILSEVYRIISKKSISSDQTT---ANANIKEGQTIDVAATSESNAKKPC 217

Query: 249 CFAS 253
           C +S
Sbjct: 246 CSSS 217

The following BLAST results are available for this feature:

BLAST of CcUC04G059770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881448.1	1.0e-115	87.70	ras-related protein RABA4d [Benincasa hispida]	[more]
XP_004150166.1	2.2e-115	87.70	ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Cs...	[more]
XP_008460801.1	2.5e-114	86.90	PREDICTED: ras-related protein RABA4d [Cucumis melo] >KAA0053214.1 ras-related p...	[more]
XP_022925137.1	2.6e-111	84.92	ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related prot...	[more]
XP_022151622.1	4.4e-111	85.32	ras-related protein RABA4d-like [Momordica charantia]	[more]

BLAST of CcUC04G059770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LH50	4.3e-101	77.51	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q9FE79	2.8e-92	69.05	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
P25766	4.7e-92	70.97	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q40191	6.2e-84	66.80	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q40520	7.5e-82	64.40	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]

BLAST of CcUC04G059770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW90	1.1e-115	87.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1	[more]
A0A5A7UD85	1.2e-114	86.90	Ras-related protein RABA4d OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3CDP9	1.2e-114	86.90	ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1	[more]
A0A6J1EAZ2	1.2e-111	84.92	ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV...	[more]
A0A6J1DE05	2.1e-111	85.32	ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111019535 P...	[more]

BLAST of CcUC04G059770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12160.1	3.0e-102	77.51	RAB GTPase homolog A4D	[more]
AT5G47960.1	2.0e-93	69.05	RAB GTPase homolog A4C	[more]
AT5G65270.1	3.8e-81	64.92	RAB GTPase homolog A4A	[more]
AT4G39990.1	1.8e-78	60.80	RAB GTPase homolog A4B	[more]
AT1G09630.1	8.3e-68	54.51	RAB GTPase 11C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 16..37 score: 50.9 coord: 183..205 score: 43.15 coord: 39..55 score: 34.43 coord: 57..79 score: 50.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..244 e-value: 0.0055 score: -5.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..208 e-value: 1.1E-91 score: 320.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..208 e-value: 1.3E-12 score: 58.0
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..78
None	No IPR available	PANTHER	PTHR47978:SF27	BNAA05G26830D PROTEIN	coord: 104..250
None	No IPR available	PANTHER	PTHR47978:SF27	BNAA05G26830D PROTEIN	coord: 1..78
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 104..250
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..249 score: 33.907452
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..209 score: 8.616596
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..206 e-value: 2.59507E-118 score: 332.988
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..204 e-value: 1.6E-7 score: -22.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 106..206 e-value: 2.9E-31 score: 108.3 coord: 17..95 e-value: 2.1E-23 score: 82.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..252 score: 16.129951
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..227 e-value: 3.1E-66 score: 224.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..211
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 106..200 e-value: 1.5E-13 score: 48.9 coord: 15..77 e-value: 7.9E-16 score: 56.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G059770.1	CcUC04G059770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080092	regulation of pollen tube growth
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0090404	pollen tube tip
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding