CcUC04G059680 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G059680
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S ribosomal protein L6
Location	CicolChr04: 1106285 .. 1112547 (-)
RNA-Seq Expression	CcUC04G059680
Synteny	CcUC04G059680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATCCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTTTTCCCTCGCCACGATGCCAAGCCTAAGGCCGATGCTCCAGCAGAGAAGCCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTAACAAGCGCAAAGCCAAGCCCACCAAACTTAGGTTCACTCTCTCTCAATCTTCTTTCTTTCGATGTTATTTTACTGTAGTGTCTTTGAACCCATTTTGCTTGCTCTATTGTTGACTTTGGTATGGTTGGAAAGCTGAGGAATTGGAGTAAATAGAGTTCACACTGTAGCTATGGAAAAGGGGGAATTCTTACACCTAAGTGAGAGTCATAAAAGAGTGATTTATTTAACACTTGATTTGAGTTTTGGGTTTTGAATTGGGTGAAATGAAGTAATGTTGCCCATTTTCCAAATAATGAACATTGGATCCAGGGGGTGTATTCATCTAACATAGTTTTATCAATTTTATACTATTTGCAGGTCTAGTATTACTCCTGGAACCGTTCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGGGTCGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTGGTGACTGGTGTGTCTTGACTATTTCTCCAATTGCCTTTCTTTTATGATTTTTTTTTCTACTATCACACCATGTTGGGGAATCTGTTCACGGGGATTGGCTTTTCTTTTTCTACATTCTTTGTGAAGTTGTGTTAGATTTGCATTGGAAGTCTCATTCATGGTATCTTAGCATCATAACAATTGTTTGCCTTAGGTTTGCATGTCATCTTAAATGTGTTGCCTGGAAGTAGGATACTTTGGGTTTACATTTTGGCAGTATTTATAGTTGAACCTTGAAATCAATTAATATTGAAATGTCTCATGCCTTGCATTTTGCCCATATGCCCTGCCAATGGTCTTTACACCTCCTATTCTGATTATATGCTCTGCTAATGATCTCTACATGCCATAAGTTTCTAAGCTTTATGTGCAATCTCTTACTGTTCTCTTCTGATGGTTGTGGGTAGGGGGAGGGTTTTGGCTTGGCGATGTGGATTTTATTCGTACATGTTTAGGAGAACGGATGTATATAAAGTAGTGATTAGCCAAGGTTTTTGATTTTAAATCTGCGATTCATGAACCTGCTAGCGATTATCTGAATTTAAAGTTTGTCATTTTAGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCAACCAAGGTCGACATTGCAGGAGTTAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGACGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGTTCGTAGTTGTTTTCCATCCTTTTTTTTTTTTTTTTGTTCAAATACTTAGAAAGATTCATTCCTTTGTCCTAATTTCTGGTTGCCCTTGTTACATGTAGGAAAAAACTGCACTCCCACAAGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCCCTCCTAAAGTCCATCGAGGTAGTTGCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCATGAGCTTGTTTTCTAGATATTTTCTCTTTGGTGCTGATACTTTTCTTGTGGAATTATTTGATCCCTACAATCCTATTGTTCATGTTTTGTTATGAGGATTCTAGATTTGAAATTATGTCTCACAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTGCATTACGTTAGCTTCCTTTGACTAATAGTGATACGAGTGTAGTTTTTGTTCAATTGCTGTCTGGTGAAACTCGAGAGAAACATTTGAAAAGATAGATGGCTTGACTTGCATGGTGCATGGCCATGTTTGATTAGTTTGCAACAACATGCTTTATGGGTAATTTATGCTCGAGTCTCAAATATTTGGGGTTTCTTTTTCAATTTGGTTAAAATGATCTTTTTAAAGTCTTTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGCAAATGATAATTTCCAGCAAATGATAATGTGATATCAATAATTCTCTTGTTGGCACGTTTAAGAGTGATATTGAAAGGATTAAAATCACTTTTACATGCTTTTAATCATTGGAAAACAATTGTAATGGTATGCAAATTGGATTTTAAAGTGTAAAATTAAACATTTAGAGGTGTTTTAAATTGATTTTAAACATGACATGCAATGTTATCGATTGACAATGCTTGATATAAACTGGTGAAGCTACACATTAGAATGACTAATTTGTATTATAATTCTGGATAGAAAGTTGACCTTTTAAGAAATTGATGATACAGTAGCAATTGATAAGTTGATGCAAAATTTATTTTATGAACTATATAGTAATATCATAAAAACGTTAATGATGTGAGAGACGAGACGAAATTGGAAAAATTGTTTGGAGCTAAATTCAGTTACATATTTGGCGAAGAAAGAGTGTAATTAATTCATAATGTTATTTGCGAGTTATATTATGGCCAAGGGAAGCTCTTACATAAGCATGGCGTTGCTGTGACGAGAAACAATTTTCGAAGTTGAGGAAAATTCATCCGACTTAAATATTGATGCAATTGACTTTATAAGCCATAACAAACTGTGAATCTCTTGAAAAAATAGCTAAAGAAACTCCAAACAAACTGTGAATCACTTCCAGATATGCTATGAAAAGGCTAGTAGTGGCTAGAAACTCTGATGGTACAGAATTTCTAGTTCTACATGCCAGTGGGGAACATGTCCAGAAAAATCAGTTCAAAGATAAGGAACAAAATGTGCTCATGCATGGATGTCATAGGGCTTCTTCTTCGTCTAGGTTTACTTGGTCTTCCACGAACCAATTGAAACATGCTATTCATATATGACTTTTTTGTTGGGTTAATGACACAACTTGTTGTATTTATTTTCTTTGCAAACACGTTACCAAATTTGTTTATTAGTTTTCTTATATTTAGTTTACCAACTTTTTTTGTTATATATCAAAGTTCTTATTTATGTTTAGAAACATAAGTGTAATGGTAGTTATGAAACTGATAACTTTCCTCAAGTATGAGCATTTTTTTTTTTTTTAACATTTAACAAATTTTGATGAAATGTATTTTATTTGACACTCGAATATTATCATCAGTCAAGCTTTAATGACGATAAACAAGTATCATTTTATGTAATTATGTGGTGTTTTGAAAGTGTCACGTATTAAGGTTTTCTTGATAGCATAAATATGATATTATTATTGTTTTTATGACAGATTCTCAATGTTAATATATAAGTTTAGCTGACAAGAAAAGTATAGACTAAATATACATAACTTTAGAAAGTCAAAAATTAGTATTATATAATTCAACATTTTAATATATATTTTGTTGCAAAATTTGGGAAGGGACAGAACACACTTGACATTCACATGCATCGATAGTGAACCTCTTGATTTGGGAGAAAGATATGACCTAAAAAAAAAATTGCTACGACGTTTGCCAACACATCTTTGATGCTTAAGTCAAATATGAAGAAAATAGCGTGTAGATAATGTGACAAGGAAAAAGTTATATCTTTTGAGGTAAAAATAATACATTTATATGATGATTGACATAGCAATTTCAATTTTTCTTTAGGATAGCATCAAAAGACTTTGAACAAGATTGTTCGCTGTGTCGAGACTTGCCAAACTAAGATGGATCTCACTACTCTAGCTCGTAGAACAAGTGGATGAACCCCAAGGCAAGCAATATAATCAATTTTTCAATATTGAACTTCAAAAGCAAAAAAATAAGGGAGTTTTGGTTCACTAAATAAGGAAAGTAAATGAAATATAAAGAAATTAAATCTTATCGAAGTTTCCAATTCAAGGTAGTTTCATCCAATTACAATTTTCGAGGTTACAAAATTAATCACTCAATATCTAACAATTACTTAGTCTACTTAGCTTATTCGAAAAAGTTGGGATAATGTTAGTTTTCCTAAGTCTATTGATTTAACAAAGCATTACAACCAACACTTATAATCTAATTAATTGGGCATGTGAAGACTAAGATAAAATCAATGAGGTAAGATAGCTACACCTACAAAACTTAGTTTCTTTTATCATACTAGCTATGCACTTGTGGAAAAGTTATAGAAAAAACACACTTGAGCCATCTCCGATAATACGTACTAAAATCAAATAAATTCACTACCATTATGAATCTTGAAATCATGCATTGCGTACATATAAGAAATCAATACGATGCGTCAATTCAATAATGAAAGCTCATAAAGAATAGGAACAAGAACAAAAGAATACTTAAATAAATACAGAACATTATAATGAAGTTTAAAGTCTCATGATTTTACAATTGGATTGAATCGACCCTTATATTAGAAGTTCAAACTCTAGCCAAACATCGTGTTATAGCTAAAGTTCTACTTAAAACCCATAAAAGCTAAAAGTGTAGATTGAAATTAAATAGAGCGGAACAAGACTATAGGTAATTCACCCAAGTTAGATACTATTAAGAAATTGGCAAATAAATATGAACAGAAAACATAAATCAATAGAGAATTGATACACAAATTTACATGGTTCACTAACACTATATTAGCTACATCCATAGGTAGAAGGAGAGTAGTTTATTATTACAGAGAATAATTATTATTACAGAGTCAGAGGCGCCTCTAGGGTTAGCGAATTTATATATTTCACTTCTCTAAACCCTAGAGTAAAAAACATAGATAATGTAAATATGACAAATACGAATACAAGACTCCAGTAGTTGGTTGTTCGAAGTGTCAAATATCGAATTTAAGGCATTCCAATTAATCCACCTTTGACTTAAATTTTCTCACATTTAACAAATTGGTATCAGAGTAGGTCTTGACATAGCCATGTCGGAAAAATTCTCAAGTGGTAAACAAAGAAGTGAGAGCCTCTGAAGATGTAGTTATGGTAGTATCTGTCCATGGTTGAGGCTTTAGATGGGCAGTGTGCTCATATGTAATTTGGAGAGATGACTATTTGAGGGGAAGCTTGATGGTTCTTTATGTAGGAATTGAATTCCTTTTGCGAAAGCATGTGATCGCTTTTGCCCAATTTTGTTACAAGAATTTTACACAGAACAAAAAAACAACATAAGTTTAAGCAAGTTTAACATGAAAGATAAGAAAGCAAATTGAAATACCTTTTGGAGAACACTTCTACAAAATTCCACCCAACCTAGAAAACACAGCTACATGAACCAATTTGATTCAGACACCACCAATATGGTCTTCTCCACGATTCTCTTGGAACAAGGGGGATTGTGGAATCCGTTGTGACAGGGTTGGGAGAAAACACAGAGAACTTTTCTCTGTTTTGCTTTTTGCAGAAAGATTTTGAAAGAGGTGAGTCAGAATTCTTATCAGAGAGATCTCAAAATAAAATGTAGTTCCCCTCTTAAAAATAGATAGATTTCTCCATTTAGGAAAAATAATACGAGGGGAGTTACCACTCTCCCCACTCACCATTCCCTTACTTTGTAGTAGGGTTGGCAAAAATCTGGTCGAGTCTTTGTGCGTACCCGCCTCAATCGGAGCGAGGAATCCCTTGTTTAACAGGAGATGAGGATCAAATTGGGGACACAAAATGGGTCCCCAGTCGGGGACGAGAAGGGTATCCCCGCCCTGAATAACTTTTTATTTATATATATATATATATATAGCAGTAACTTATTTTTATTATAAGCTACTGTTTGTGTTTTTTTTAAATATTTTTTTTAAAATTTCATTTCTTAGTATATATATAATTAAATTTTAACTTTATATTAGATTTACTATAAAAAAATCTAAAATGTTTCTTAATTATTAATGTAAATAAATAAAACAATAACAATACCCTAGAATGTTATGGTGTGCTAAATACCAATGAACTTTTTGGGCATAAACATAATTTATGGCTATATGAATGAACTTTGTATAATTTCTAAGGTGGGATAATTACGATATGAAGTTTATTAGTTGTTGGATGCAAGATCTAAGGTGTCTGTTATTTTTCTTATCAAACCGTGTACACCCTATGACTGTGAACCTTCAGGTTCAATACTTATGACTATGACTTGATTCCCCTTGGGATCGCCACCTATGCTTATGATGGTGACCTTCGGGTTTCCTACCTATGA

mRNA sequence

ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATCCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTTTTCCCTCGCCACGATGCCAAGCCTAAGGCCGATGCTCCAGCAGAGAAGCCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTAACAAGCGCAAAGCCAAGCCCACCAAACTTAGGTCTAGTATTACTCCTGGAACCGTTCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGGGTCGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTGGTGACTGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCAACCAAGGTCGACATTGCAGGAGTTAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGACGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAACTGCACTCCCACAAGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCCCTCCTAAAGTCCATCGAGGTAGTTGCAGACTTAAAGACCTACTTAGCTGCAAGACACCACCAATATGGTCTTCTCCACGATTCTCTTGGAACAAGGGGGATTGTGGAATCCGTTGTGACAGGGTTGGGAGAAAACACAGAGAACTTTTCTCTGTTTTGCTTTTTGCAGAAAGATTTTGAAAGAGTAGGGTTGGCAAAAATCTGGTCGAGTCTTTGTGCGTACCCGCCTCAATCGGAGCGAGGAATCCCTTGTTTAACAGGAGATGAGGATCAAATTGGGGACACAAAATGGGTCCCCAGTCGGGGACGAGAAGGGTTCAATACTTATGACTATGACTTGATTCCCCTTGGGATCGCCACCTATGCTTATGATGGTGACCTTCGGGTTTCCTACCTATGA

Coding sequence (CDS)

ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATCCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTTTTCCCTCGCCACGATGCCAAGCCTAAGGCCGATGCTCCAGCAGAGAAGCCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTAACAAGCGCAAAGCCAAGCCCACCAAACTTAGGTCTAGTATTACTCCTGGAACCGTTCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGGGTCGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTGGTGACTGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCAACCAAGGTCGACATTGCAGGAGTTAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGACGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAACTGCACTCCCACAAGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCCCTCCTAAAGTCCATCGAGGTAGTTGCAGACTTAAAGACCTACTTAGCTGCAAGACACCACCAATATGGTCTTCTCCACGATTCTCTTGGAACAAGGGGGATTGTGGAATCCGTTGTGACAGGGTTGGGAGAAAACACAGAGAACTTTTCTCTGTTTTGCTTTTTGCAGAAAGATTTTGAAAGAGTAGGGTTGGCAAAAATCTGGTCGAGTCTTTGTGCGTACCCGCCTCAATCGGAGCGAGGAATCCCTTGTTTAACAGGAGATGAGGATCAAATTGGGGACACAAAATGGGTCCCCAGTCGGGGACGAGAAGGGTTCAATACTTATGACTATGACTTGATTCCCCTTGGGATCGCCACCTATGCTTATGATGGTGACCTTCGGGTTTCCTACCTATGA

Protein sequence

MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEEKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAARHHQYGLLHDSLGTRGIVESVVTGLGENTENFSLFCFLQKDFERVGLAKIWSSLCAYPPQSERGIPCLTGDEDQIGDTKWVPSRGREGFNTYDYDLIPLGIATYAYDGDLRVSYL

Homology

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BLAST of CcUC04G059680 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409.1 bits (1050), Expect = 3.7e-110
Identity = 210/217 (96.77%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE V+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

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BLAST of CcUC04G059680 vs. NCBI nr
Match: XP_038880885.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 3.7e-110
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLQSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE VADLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 217

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BLAST of CcUC04G059680 vs. NCBI nr
Match: XP_004149609.1 (60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_001784 [Cucumis sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 1.4e-109
Identity = 209/217 (96.31%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE V+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CcUC04G059680 vs. NCBI nr
Match: XP_023528566.1 (60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405.6 bits (1041), Expect = 4.1e-109
Identity = 208/217 (95.85%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE V+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CcUC04G059680 vs. NCBI nr
Match: XP_022983464.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 4.1e-109
Identity = 209/217 (96.31%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE V+ LKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSYLKTYLAAR 217

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BLAST of CcUC04G059680 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.7e-95
Identity = 175/216 (81.02%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           K  +PQ+KK+DQK VD+AL+KSIE V +LK YL AR
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGAR 219

[Close]

BLAST of CcUC04G059680 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 6.0e-95
Identity = 176/214 (82.24%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IE V +LKTYL AR
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

[Close]

BLAST of CcUC04G059680 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.0e-94
Identity = 176/214 (82.24%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IE V +LKTYL AR
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

[Close]

BLAST of CcUC04G059680 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-91
Identity = 173/210 (82.38%), Postives = 186/210 (88.57%), Query Frame = 0


Query: 8   VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADD 67
           VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 127
           VKKPL+NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 128 PLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEEKTALPQ 187
           PLRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K  +KK KKGEGEFFEAEK+E   LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 188 DKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           +KKDDQKAVD ALLK+IE V +LK YL AR
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGAR 220

[Close]

BLAST of CcUC04G059680 vs. ExPASy Swiss-Prot
Match: Q2YGT9 (60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3)

HSP 1 Score: 173.7 bits (439), Expect = 3.4e-42
Identity = 109/229 (47.60%), Postives = 142/229 (62.01%), Query Frame = 0


Query: 9   SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKP--------- 68
           SRNP L+RG+G+YSRS MY ++ L+  K            K +  A   KP         
Sbjct: 41  SRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT 100

Query: 69  --------PKFYPADDVKKPLVNKRKAKP-----TKLRSSITPGTVLIILTGRFKGKRVV 128
                   P++YP +DV + L++  K KP      KLR+SITPGT+LIILTGR +GKRV+
Sbjct: 101 RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVI 160

Query: 129 FLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNV-EKFDDKYFSKDVQK 188
           FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DI+GV + E   D YF K   +
Sbjct: 161 FLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLR 220

Query: 189 KKKKGEGEFFEAEKEEKTALPQDKKDDQKAVDSALLKSIEVVADLKTYL 215
           K +  EGE F+ EK EK  + + +K DQKAVDS +L+ I+ V  L+ YL
Sbjct: 221 KPRHQEGEIFDTEK-EKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYL 267

[Close]

BLAST of CcUC04G059680 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.8e-110
Identity = 210/217 (96.77%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE V+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CcUC04G059680 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.8e-110
Identity = 209/217 (96.31%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE V+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CcUC04G059680 vs. ExPASy TrEMBL
Match: A0A6J1J7G9 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 2.0e-109
Identity = 209/217 (96.31%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIE V+ LKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSYLKTYLAAR 217

[Close]

BLAST of CcUC04G059680 vs. ExPASy TrEMBL
Match: A0A5D3CKB9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00210 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.6e-109
Identity = 208/217 (95.85%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQK VDSALLKSIE V+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CcUC04G059680 vs. ExPASy TrEMBL
Match: A0A1S3CFY6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.6e-109
Identity = 208/217 (95.85%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSK+VQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           EK+ALPQDKKDDQK VDSALLKSIE V+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CcUC04G059680 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 350.1 bits (897), Expect = 1.9e-96
Identity = 175/216 (81.02%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KTALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
           K  +PQ+KK+DQK VD+AL+KSIE V +LK YL AR
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGAR 219

[Close]

BLAST of CcUC04G059680 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 349.0 bits (894), Expect = 4.2e-96
Identity = 176/214 (82.24%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IE V +LKTYL AR
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

[Close]

BLAST of CcUC04G059680 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 348.2 bits (892), Expect = 7.2e-96
Identity = 176/214 (82.24%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKDVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEVVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IE V +LKTYL AR
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

The following BLAST results are available for this feature:

BLAST of CcUC04G059680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935449.1	3.7e-110	96.77	60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal...	[more]
XP_038880885.1	3.7e-110	97.70	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_004149609.1	1.4e-109	96.31	60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Cs...	[more]
XP_023528566.1	4.1e-109	95.85	60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983464.1	4.1e-109	96.31	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]

BLAST of CcUC04G059680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	2.7e-95	81.02	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C6	6.0e-95	82.24	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9C9C5	1.0e-94	82.24	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P34091	1.1e-91	82.38	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
Q2YGT9	3.4e-42	47.60	60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3	[more]

BLAST of CcUC04G059680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5G0	1.8e-110	96.77	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A0A0L9J7	6.8e-110	96.31	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
A0A6J1J7G9	2.0e-109	96.31	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1	[more]
A0A5D3CKB9	2.6e-109	95.85	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFY6	2.6e-109	95.85	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1	[more]

BLAST of CcUC04G059680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	1.9e-96	81.02	Ribosomal protein L6 family protein	[more]
AT1G74060.1	4.2e-96	82.24	Ribosomal protein L6 family protein	[more]
AT1G74050.1	7.2e-96	82.24	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 8.1E-17 score: 63.0
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..217 e-value: 5.1E-31 score: 107.5
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..218
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 4..59 e-value: 4.3E-16 score: 58.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..68
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..218
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..217 e-value: 1.08092E-71 score: 217.416
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 84..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G059680.1	CcUC04G059680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome