CcUC03G059270 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G059270
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Germin-like protein
Location	CicolChr03: 31212740 .. 31213476 (-)
RNA-Seq Expression	CcUC03G059270
Synteny	CcUC03G059270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCAAACAATAACCCATGGCCTCCATTACTCCCATTTCTCTCTTCACATTTGTTCTCCTTCTTGCAACTTCTGCTGCTGACATTGACTTGCTTCAAGATATTTGTGTCGCTGATCTCGCTTCTGGTATTTCCAATTTTTACTCCCTCTCCATTTCTTCACTTCATGATCTTTAGTCTAAGTGACTAATTTTGGTAGGGATTAAAGTGAACGGGTTTGTATGCAAAACAGACATATCTGCTACCGATTTCTTCTTTGACGGACTTGCCAACCCCGGTCTCACCAACACTACGTCAGGCGCGGTGATCACTGGAGCTAATGTCCAAAATATCCCAGGCCCCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACGCCCCTGGTGGCCGGAATCCACCCCACACGCACCCATGAGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGATGTCAGCTTCATAACTACAGGCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAGAAGAACAATGGGAAGGACGCTGCTACAGTGGTTGCGGCATTCAACAGCCAATTTCCAGGAACTCAGTCCATAGCTACCACTCTATTTGCAACAACTCCTTCAGTGCCAAATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTCTGCCCCCACAAACTAA

mRNA sequence

CAACCAAACAATAACCCATGGCCTCCATTACTCCCATTTCTCTCTTCACATTTGTTCTCCTTCTTGCAACTTCTGCTGCTGACATTGACTTGCTTCAAGATATTTGTGTCGCTGATCTCGCTTCTGACATATCTGCTACCGATTTCTTCTTTGACGGACTTGCCAACCCCGGTCTCACCAACACTACGTCAGGCGCGGTGATCACTGGAGCTAATGTCCAAAATATCCCAGGCCCCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACGCCCCTGGCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAGAAGAACAATGGGAAGGACGCTGCTACAGTGGTTGCGGCATTCAACAGCCAATTTCCAGGAACTCAGTCCATAGCTACCACTCTATTTGCAACAACTCCTTCAGTGCCAAATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTCTGCCCCCACAAACTAA

Coding sequence (CDS)

ATGGCCTCCATTACTCCCATTTCTCTCTTCACATTTGTTCTCCTTCTTGCAACTTCTGCTGCTGACATTGACTTGCTTCAAGATATTTGTGTCGCTGATCTCGCTTCTGACATATCTGCTACCGATTTCTTCTTTGACGGACTTGCCAACCCCGGTCTCACCAACACTACGTCAGGCGCGGTGATCACTGGAGCTAATGTCCAAAATATCCCAGGCCCCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACGCCCCTGGCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAGAAGAACAATGGGAAGGACGCTGCTACAGTGGTTGCGGCATTCAACAGCCAATTTCCAGGAACTCAGTCCATAGCTACCACTCTATTTGCAACAACTCCTTCAGTGCCAAATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTCTGCCCCCACAAACTAA

Protein sequence

MASITPISLFTFVLLLATSAADIDLLQDICVADLASDISATDFFFDGLANPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATTLFATTPSVPNDVLTKAFQVGTKEVEKIKSRSAPTN

Homology

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BLAST of CcUC03G059270 vs. NCBI nr
Match: XP_038878935.1 (germin-like protein 5-1 isoform X2 [Benincasa hispida])

HSP 1 Score: 258.1 bits (658), Expect = 5.6e-65
Identity = 149/210 (70.95%), Postives = 158/210 (75.24%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS--------DISATDFFFDGLANPG 60
           MAS+ PISL TF L+LA S AD DLLQDICVADLAS        +ISATDFFF+GLA+PG
Sbjct: 1   MASMAPISLLTFALILAISTADFDLLQDICVADLASVNGFACKTNISATDFFFNGLASPG 60

Query: 61  LTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG------------------------ 120
           LTNTTSGAV+TGANVQ I G NTLGVSLARIDYAPG                        
Sbjct: 61  LTNTTSGAVVTGANVQKIQGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGKLDV 120

Query: 121 ------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATTLFA 173
                 NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAA V+AAFNSQ PGTQSIA TLFA
Sbjct: 121 GFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAATLFA 180

[Close]

BLAST of CcUC03G059270 vs. NCBI nr
Match: XP_038878934.1 (germin-like protein 5-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 149/213 (69.95%), Postives = 158/213 (74.18%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-----------DISATDFFFDGLA 60
           MAS+ PISL TF L+LA S AD DLLQDICVADLAS           +ISATDFFF+GLA
Sbjct: 1   MASMAPISLLTFALILAISTADFDLLQDICVADLASGIKVNGFACKTNISATDFFFNGLA 60

Query: 61  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG--------------------- 120
           +PGLTNTTSGAV+TGANVQ I G NTLGVSLARIDYAPG                     
Sbjct: 61  SPGLTNTTSGAVVTGANVQKIQGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGK 120

Query: 121 ---------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                    NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAA V+AAFNSQ PGTQSIA T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

[Close]

BLAST of CcUC03G059270 vs. NCBI nr
Match: XP_022157615.1 (germin-like protein subfamily 2 member 4 [Momordica charantia])

HSP 1 Score: 251.5 bits (641), Expect = 5.2e-63
Identity = 143/213 (67.14%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-----------DISATDFFFDGLA 60
           MASI  IS+ TFV+++ T AAD+DLLQDICVADL+S           +ISA DFFFDGLA
Sbjct: 1   MASIAAISVLTFVVIVGTCAADVDLLQDICVADLSSGIKVNGFPCKTNISAADFFFDGLA 60

Query: 61  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG--------------------- 120
            PGLTNTTSGA +TGANVQ IPG NTLGVSLAR+DYAPG                     
Sbjct: 61  KPGLTNTTSGAAVTGANVQKIPGLNTLGVSLARVDYAPGGLNPPHTHPRATEIVFVLEGE 120

Query: 121 ---------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                    NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAA V+AAFNSQ PGTQSIA T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

[Close]

BLAST of CcUC03G059270 vs. NCBI nr
Match: XP_022969982.1 (germin-like protein 5-1 [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 4.4e-62
Identity = 142/213 (66.67%), Postives = 155/213 (72.77%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-----------DISATDFFFDGLA 60
           MA I  IS+  F ++  +SAAD DLLQDICVADLAS           ++SATDFFFDGLA
Sbjct: 1   MAYIAAISVLVFAVIATSSAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAP---------------------- 120
            PGLTNTTSGAV+TGANVQ IPG NTLGVSLARIDYAP                      
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQ 120

Query: 121 --------GNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                   GNVLISKSIKKGEIFVFPKGLVHFQKNNGK+AA V+AAFNSQ PGTQS+A T
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

[Close]

BLAST of CcUC03G059270 vs. NCBI nr
Match: KAG6588513.1 (Germin-like protein 5-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-61
Identity = 141/213 (66.20%), Postives = 154/213 (72.30%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-----------DISATDFFFDGLA 60
           MA I  IS+  F ++  + AAD DLLQDICVADLAS           ++SATDFFFDGLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAP---------------------- 120
            PGLTNTTSGAV+TGANVQ IPG NTLGVSLARIDYAP                      
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 121 --------GNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                   GNVLISKSIKKGEIFVFPKGLVHFQKNNGK+AA V+AAFNSQ PGTQS+A T
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

[Close]

BLAST of CcUC03G059270 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.6e-46
Identity = 110/206 (53.40%), Postives = 131/206 (63.59%), Query Frame = 0


Query: 13  VLLLA-----TSAADIDLLQDICVADLASDISAT-----------DFFFDGLANPGLTNT 72
           VLLLA     ++A D DLLQDICVADL S +              DF+F GLA  G TN 
Sbjct: 13  VLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLAAAGNTNN 72

Query: 73  TSGAVITGANVQNIPGPNTLGVSLARIDYAPG---------------------------- 132
           T G+V+TGANV+ +PG NTLGVS++RIDYAPG                            
Sbjct: 73  TYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFIT 132

Query: 133 --NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATTLFATTPS 173
             N L +K+I  G++FVFP+GL+HFQKNNG   A V++AFNSQ PGTQS+A TLFA +P 
Sbjct: 133 TANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPE 192

[Close]

BLAST of CcUC03G059270 vs. ExPASy Swiss-Prot
Match: Q9S8P4 (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-44
Identity = 109/215 (50.70%), Postives = 130/215 (60.47%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADL-------------ASDISATDFFFDG 60
           M  I  + L         +AAD D LQD+CVAD              AS+++A DFF + 
Sbjct: 1   MKLIAVLLLVVLATATTATAADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNL 60

Query: 61  LANPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG------------------- 120
           L   G TN T G+++TGANVQ IPG NTLGVS+ARIDYAPG                   
Sbjct: 61  LVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 121 -----------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIA 173
                      N LI+K+I KGE FVFPKGLVHFQKNNG + ATV+A FNSQ PGT +I 
Sbjct: 121 GQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIP 180

[Close]

BLAST of CcUC03G059270 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 3.3e-44
Identity = 104/213 (48.83%), Postives = 132/213 (61.97%), Query Frame = 0


Query: 3   SITPISLFTFVLLLATSAADIDLLQDICVADL-------------ASDISATDFFFDGLA 62
           ++T + L T V    +S+AD D+LQD+CVADL             A+ +++ DFF  GLA
Sbjct: 5   TLTLLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLA 64

Query: 63  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG--------------------- 122
            PGLTN T GA++TGANV  IPG NTLGVSL+RIDYAPG                     
Sbjct: 65  KPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGT 124

Query: 123 ---------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                    N LIS+S+KKG++F FPKGLVHFQKNNG   A+V+AAFNSQ PGTQS+  T
Sbjct: 125 LDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGAT 184

[Close]

BLAST of CcUC03G059270 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-42
Identity = 103/210 (49.05%), Postives = 129/210 (61.43%), Query Frame = 0


Query: 10  FTFVLL---LATSAADIDLLQDICVADLA-------------SDISATDFFFDGLANPGL 69
           F F LL   +   A D D LQD+CVAD               S+I+A+DFFF G+  P +
Sbjct: 8   FFFTLLSLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAV 67

Query: 70  TNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG------------------------- 129
            N T G+ +TGANV+ I G NTLGVSLARIDYAPG                         
Sbjct: 68  VNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVG 127

Query: 130 -----NVLISKSIKKGEIFVFPKGLVHFQKNNGK-DAATVVAAFNSQFPGTQSIATTLFA 173
                N L +K++KKGE+FVFP+GL+H+QKNN K   A+V++AFNSQ PGTQSIA TLF 
Sbjct: 128 FITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFT 187

[Close]

BLAST of CcUC03G059270 vs. ExPASy Swiss-Prot
Match: Q9FZ27 (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.9e-42
Identity = 100/211 (47.39%), Postives = 130/211 (61.61%), Query Frame = 0


Query: 4   ITPISLFTFVLLLATSAADIDLLQDICVADLAS-------------DISATDFFFDGLAN 63
           I+ I   + +++ +  A D D LQD+CVAD +              +I+ +DFFF G++ 
Sbjct: 6   ISIIIALSCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISK 65

Query: 64  PGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG---------------------- 123
           P + N+T G+ +TGANV+ IPG NTL VSLARIDYAPG                      
Sbjct: 66  PAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGEL 125

Query: 124 --------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATTL 172
                   N L +K+IK GE+FVFP+GLVHFQKNNGK  A+V++AFNSQ PGT S+A TL
Sbjct: 126 EVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATL 185

[Close]

BLAST of CcUC03G059270 vs. ExPASy TrEMBL
Match: A0A6J1DTK8 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111024271 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.5e-63
Identity = 143/213 (67.14%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-----------DISATDFFFDGLA 60
           MASI  IS+ TFV+++ T AAD+DLLQDICVADL+S           +ISA DFFFDGLA
Sbjct: 1   MASIAAISVLTFVVIVGTCAADVDLLQDICVADLSSGIKVNGFPCKTNISAADFFFDGLA 60

Query: 61  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG--------------------- 120
            PGLTNTTSGA +TGANVQ IPG NTLGVSLAR+DYAPG                     
Sbjct: 61  KPGLTNTTSGAAVTGANVQKIPGLNTLGVSLARVDYAPGGLNPPHTHPRATEIVFVLEGE 120

Query: 121 ---------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                    NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAA V+AAFNSQ PGTQSIA T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

[Close]

BLAST of CcUC03G059270 vs. ExPASy TrEMBL
Match: A0A6J1HXU8 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469013 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 142/213 (66.67%), Postives = 155/213 (72.77%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-----------DISATDFFFDGLA 60
           MA I  IS+  F ++  +SAAD DLLQDICVADLAS           ++SATDFFFDGLA
Sbjct: 1   MAYIAAISVLVFAVIATSSAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAP---------------------- 120
            PGLTNTTSGAV+TGANVQ IPG NTLGVSLARIDYAP                      
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQ 120

Query: 121 --------GNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                   GNVLISKSIKKGEIFVFPKGLVHFQKNNGK+AA V+AAFNSQ PGTQS+A T
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

[Close]

BLAST of CcUC03G059270 vs. ExPASy TrEMBL
Match: A0A6J1EK67 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435222 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.1e-62
Identity = 141/213 (66.20%), Postives = 154/213 (72.30%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-----------DISATDFFFDGLA 60
           MA I  IS+  F ++  + AAD DLLQDICVADLAS           ++SATDFFFDGLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG--------------------- 120
            PGLTNTTSGAV+TGANVQ IPG NTLGVSLARIDYAPG                     
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 121 ---------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                    NVLISKSIKKGEIFVFPKGLVHFQKNNGK+AA V+AAFNSQ PGTQS+A T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

[Close]

BLAST of CcUC03G059270 vs. ExPASy TrEMBL
Match: A0A6A1UFN8 (Germin-like protein OS=Morella rubra OX=262757 GN=CJ030_MR0G027019 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.1e-58
Identity = 133/215 (61.86%), Postives = 150/215 (69.77%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-------------DISATDFFFDG 60
           M +I P+ + TF L+L  +AAD DLLQD+CVADL S             +ISA DFFFDG
Sbjct: 1   MVAIVPLLVTTFALVLTAAAADPDLLQDVCVADLTSGVKVNGFTCKDLANISAADFFFDG 60

Query: 61  LANPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG------------------- 120
           LA PGLTNTT G+++T ANVQ IPG NTLGVSL+RIDYAPG                   
Sbjct: 61  LAKPGLTNTTFGSLVTAANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIVFVLE 120

Query: 121 -----------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIA 173
                      NVLISKSIKKGEIFVFP+GLVHFQKNNGK+ A V+AAFNSQ PGTQSIA
Sbjct: 121 GGLDVGFITTANVLISKSIKKGEIFVFPRGLVHFQKNNGKEPAAVIAAFNSQLPGTQSIA 180

[Close]

BLAST of CcUC03G059270 vs. ExPASy TrEMBL
Match: A0A5N6QL60 (Germin-like protein OS=Carpinus fangiana OX=176857 GN=FH972_004398 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.9e-56
Identity = 134/215 (62.33%), Postives = 148/215 (68.84%), Query Frame = 0


Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLAS-------------DISATDFFFDG 60
           MA++ P+ + TF LLLA +AAD DLLQD+CVADL S             +ISA DF F G
Sbjct: 1   MAALVPLFVTTFALLLAAAAADPDLLQDVCVADLNSGINVNGFTCKSVANISAEDFSFGG 60

Query: 61  LANPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG------------------- 120
           LA PGLTN T G+++T ANVQ IPG NTLGVSL+RIDYAPG                   
Sbjct: 61  LAKPGLTNNTFGSLVTAANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIAFVLE 120

Query: 121 -----------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIA 173
                      NVLISKSIKKGEIFVFPKGLVHFQKNNGK  A V+ AFNSQ PGTQSIA
Sbjct: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIVAFNSQLPGTQSIA 180

[Close]

BLAST of CcUC03G059270 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-45
Identity = 104/213 (48.83%), Postives = 132/213 (61.97%), Query Frame = 0


Query: 3   SITPISLFTFVLLLATSAADIDLLQDICVADL-------------ASDISATDFFFDGLA 62
           ++T + L T V    +S+AD D+LQD+CVADL             A+ +++ DFF  GLA
Sbjct: 5   TLTLLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLA 64

Query: 63  NPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG--------------------- 122
            PGLTN T GA++TGANV  IPG NTLGVSL+RIDYAPG                     
Sbjct: 65  KPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGT 124

Query: 123 ---------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATT 173
                    N LIS+S+KKG++F FPKGLVHFQKNNG   A+V+AAFNSQ PGTQS+  T
Sbjct: 125 LDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGAT 184

[Close]

BLAST of CcUC03G059270 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 )

HSP 1 Score: 174.5 bits (441), Expect = 7.5e-44
Identity = 103/210 (49.05%), Postives = 129/210 (61.43%), Query Frame = 0


Query: 10  FTFVLL---LATSAADIDLLQDICVADLA-------------SDISATDFFFDGLANPGL 69
           F F LL   +   A D D LQD+CVAD               S+I+A+DFFF G+  P +
Sbjct: 8   FFFTLLSLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAV 67

Query: 70  TNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG------------------------- 129
            N T G+ +TGANV+ I G NTLGVSLARIDYAPG                         
Sbjct: 68  VNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVG 127

Query: 130 -----NVLISKSIKKGEIFVFPKGLVHFQKNNGK-DAATVVAAFNSQFPGTQSIATTLFA 173
                N L +K++KKGE+FVFP+GL+H+QKNN K   A+V++AFNSQ PGTQSIA TLF 
Sbjct: 128 FITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFT 187

[Close]

BLAST of CcUC03G059270 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 171.8 bits (434), Expect = 4.9e-43
Identity = 100/211 (47.39%), Postives = 130/211 (61.61%), Query Frame = 0


Query: 4   ITPISLFTFVLLLATSAADIDLLQDICVADLAS-------------DISATDFFFDGLAN 63
           I+ I   + +++ +  A D D LQD+CVAD +              +I+ +DFFF G++ 
Sbjct: 6   ISIIIALSCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISK 65

Query: 64  PGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG---------------------- 123
           P + N+T G+ +TGANV+ IPG NTL VSLARIDYAPG                      
Sbjct: 66  PAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGEL 125

Query: 124 --------NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATTL 172
                   N L +K+IK GE+FVFP+GLVHFQKNNGK  A+V++AFNSQ PGT S+A TL
Sbjct: 126 EVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATL 185

[Close]

BLAST of CcUC03G059270 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 )

HSP 1 Score: 168.3 bits (425), Expect = 5.4e-42
Identity = 89/168 (52.98%), Postives = 113/168 (67.26%), Query Frame = 0


Query: 36  SDISATDFFFDGLANPGLTNTTSGAVITGANVQNIPGPNTLGVSLARIDYAPG------- 95
           S+I+A+DFFF G+  P + N T G+ +TGANV+ I G NTLGVSLARIDYAPG       
Sbjct: 21  SNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHT 80

Query: 96  -----------------------NVLISKSIKKGEIFVFPKGLVHFQKNNGK-DAATVVA 155
                                  N L +K++KKGE+FVFP+GL+H+QKNN K   A+V++
Sbjct: 81  HPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVIS 140

Query: 156 AFNSQFPGTQSIATTLFATTPSVPNDVLTKAFQVGTKEVEKIKSRSAP 173
           AFNSQ PGTQSIA TLF  TP++P+ VLT  FQ+GTKE+EKIKS+ AP
Sbjct: 141 AFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAP 188

[Close]

BLAST of CcUC03G059270 vs. TAIR 10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 87/207 (42.03%), Postives = 125/207 (60.39%), Query Frame = 0


Query: 9   LFTFVLLLATSAADIDLLQDICVADL-------------ASDISATDFFFDGLANPGLTN 68
           L   V +L  + A  ++LQD+CVADL             ++ I+  DF+F GLAN   TN
Sbjct: 8   LVVVVTMLFVAMASAEMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATN 67

Query: 69  TTSGAVITGANVQNIPGPNTLGVSLARIDYAPGNV------------------------- 128
           T++G+V+TGANV+ +PG NTLG+S++RIDYAP  +                         
Sbjct: 68  TSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFV 127

Query: 129 -----LISKSIKKGEIFVFPKGLVHFQKNNGKDAATVVAAFNSQFPGTQSIATTLFATTP 173
                LI+K++ KG++F FPKGL+HFQKN     A+V+AAF+SQ PGTQS+  +LF    
Sbjct: 128 TTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFG--- 187

The following BLAST results are available for this feature:

BLAST of CcUC03G059270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878935.1	5.6e-65	70.95	germin-like protein 5-1 isoform X2 [Benincasa hispida]	[more]
XP_038878934.1	1.2e-64	69.95	germin-like protein 5-1 isoform X1 [Benincasa hispida]	[more]
XP_022157615.1	5.2e-63	67.14	germin-like protein subfamily 2 member 4 [Momordica charantia]	[more]
XP_022969982.1	4.4e-62	66.67	germin-like protein 5-1 [Cucurbita maxima]	[more]
KAG6588513.1	1.7e-61	66.20	Germin-like protein 5-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC03G059270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6I544	4.6e-46	53.40	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500...	[more]
Q9S8P4	1.1e-44	50.70	Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2	[more]
P94014	3.3e-44	48.83	Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4...	[more]
Q9M263	1.1e-42	49.05	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]
Q9FZ27	6.9e-42	47.39	Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]

BLAST of CcUC03G059270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTK8	2.5e-63	67.14	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111024271 PE=3 SV=1	[more]
A0A6J1HXU8	2.1e-62	66.67	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469013 PE=3 SV=1	[more]
A0A6J1EK67	8.1e-62	66.20	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435222 PE=3 SV=1	[more]
A0A6A1UFN8	7.1e-58	61.86	Germin-like protein OS=Morella rubra OX=262757 GN=CJ030_MR0G027019 PE=3 SV=1	[more]
A0A5N6QL60	3.9e-56	62.33	Germin-like protein OS=Carpinus fangiana OX=176857 GN=FH972_004398 PE=3 SV=1	[more]

BLAST of CcUC03G059270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09560.1	2.3e-45	48.83	germin-like protein 5	[more]
AT3G62020.1	7.5e-44	49.05	germin-like protein 10	[more]
AT1G02335.1	4.9e-43	47.39	germin-like protein subfamily 2 member 2 precursor	[more]
AT3G62020.2	5.4e-42	52.98	germin-like protein 10	[more]
AT5G26700.1	1.2e-36	42.03	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 127..142 score: 48.69 coord: 94..114 score: 55.7
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 46..164 e-value: 2.4E-6 score: 37.1
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 48..88 e-value: 1.8E-4 score: 21.1 coord: 92..163 e-value: 2.5E-18 score: 66.1
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 21..89 e-value: 8.8E-17 score: 63.1 coord: 90..172 e-value: 1.3E-29 score: 105.0
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 8..88 coord: 89..170
None	No IPR available	PANTHER	PTHR31238:SF199	GERMIN-LIKE PROTEIN	coord: 8..88 coord: 89..170
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 22..169 e-value: 2.97146E-52 score: 163.535
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 39..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G059270.1	CcUC03G059270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030145	manganese ion binding