CcUC03G058710 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G058710
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	serine/arginine-rich splicing factor 11
Location	CicolChr03: 30558683 .. 30561590 (-)
RNA-Seq Expression	CcUC03G058710
Synteny	CcUC03G058710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCTCATCTTCCTCTGTGACATCCTACACTTCTGATTCATCGTCTTCTTCTCGCCGTCGTCGTCGCCGGAGGACTCGCCGTGAAAAAGATCGGGACACGCTTAGGGTTCGCAAGAAGTCTCGCTCTCATTCTAAACGCCATCTTAGGCACCGCCGTTCCTCTGATTCTCTCTCTTCCTCCGACTCTGAATCCGATTACTCCCGGTAACCTCAATAACTTGAATACTTTTTCTCGTAGGTTGCTTTTGCTTTGTTGTTTCTGATCTTTTGTTTCCTTGGTTGTTATTGATTAGAGTTCAAAACAGATTGGGAGGTTTAGTTATTCTGAGTTTTTGTGCGATTTTTCATACTTTTGTGGAACTCTGTTGAGCCTTTTCTGATTTGTTCTCTTTTGGTTTTCTGAAGTCTTGCGATATATGTAGTCTTAGTTATGATTAGGTTGTTAATGAGAGTTGCCTGGAGTGAGAACTTCCAACTCCTGGTTCAGAATTTGAAATTTATGGTCATTTCTGTTTAGGAAGCCAAGAATTTAGGGCTCATCTTCTATTTCCTACTCTCTTAAAAAAGAAAACAAAAATGTGTTTGCCTCTTGTAGTCAATATAAGGGAAATCTTTCTTAAAATGAAAAACAAGAAATTAAGGATAGTATCTAAACACTTATATTTCTCAATAATAAGAAACAAGAAACTGAACAATTGGAATGGAAACTTTACCCAGTAACCCCTTAAAGTGTCGGGGTGAAGAAATCAAGGATCAACTGCTCTAGGCTTATAAGTATAGCAGTTTTCTGTTTCTTTATTTAAATCTATTTGGTGTACGCTGGATTATGGTGGTTGGGCTCCATAGTTTTGTTGGAATTCTTAAGGCCCTATTTGAGCCCAGAGTTTTGTTGGAATTCTTAAGGCCCTATTTGATAATCATTTGATTTTTGGTCTGTAGTTTTTGAAAACTAAGCTTCTGAACACTTCTCCCTCCCATACATTTCTTTATTATGTTATCCACTTTCTACTAATGTTTGGCCAATTTTTATAATTAAAAAGAGTAGTTACTTATTTTTGTTTTTAGAATTTGACTAGGTATTCAAGCGTCGTTTCTCTAACAAAGATGAAAATCATAATTGAGAAATTGGATGAAAACAAAACTAAAAATGAAATAGTCGTCAAAGAGGGTCTAATTTATAACCTAATTTATACTTTTCAAGATCTTGTCTCAGTTAGCGGTGTTGCTGGATTTCTAGTCAATTATTTTTGCATAGCAGATGTTATGTACCCAAGATATTTCTTACCATTCCTTGTGTATACATGTAGAAGTAATAGCTCTTCTCAAAGCGAGCCTGAAACGTCGGGCCGTTCAAAGCGGCATAAGAAGAATGATAGATTGAAGAAGGTAGATGTTTTTATATAATATTTTTCCTATTTGGCTTTGTAGTTTCACTTGTGAATTTTTCACCTTCTTGTTATTCTCTCTCTCCCTGCATCTTAGGATAAGGAGAGGGAGCGAAGTAGGAGCCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGGTAGACCACTATCCTGTTTGTGTACTATTCCCCTTCCCTTTCCCCTCCCCCCTCTTTTTTTCATAAGTGTACTATTTTCCCTTTGTTGCTGCTAATGCTGTACTTTTGATGAACTGAGAAATTGCATGGAAATAACCACTTTGTTTCATGGCTTTTATTTGTATCTACATCCTTTTAGTTTTGACATATTACTTCAAAACATATTGTGATTAAGTCTATCTAACTTCTACCACATGCATCCAATGTCTTAAAAAGAAAGCAAAAAATCCAAAGGGGTGACACTCTTAAATAAGAATCTTATTTAGTCTTTTAAGTTTCTGCCTTCCATGTATGTTTAGTCCTTGGTAGTAGAATCAGTTGCAGCCTGAACTATCTCCACGAAATAGTGTAATACATGAACCTTCATATTTTTAAGAATAAGCATCAACATGATATCATTCTTCTAATCATTCCATGCCACTCCAAGCATCATTAAGGCACAATCCTCATGTATAAGAGTCCTTAACCACTTATAATCTAAAGAAGACATAAGCTTTCAGGCTAAAGTTTTGAGACAGTCAGACAAGCCATGCAATCTTTAGACCAAAGCTGAAAGTGTTGATCTATTTGCCAAATGAAATTATTGTTTTTAGTCATGCAATCTTTAGACTGCATTATAGTTGGTTCTGTTTTTTGAGGGGTTTCTAAATTGGATATGATGTGAGATGTTCTATGACTATTTACTGATTGATTCTTTGAAATTGGAGTTGGGGTCTGTGGCATGATGATCGGGCTGTTGATTGACTTGCCTTGAATGGTTTGTTATTCGGATTTGTCCTGGCATTCGGAGTCGATGTATAGAAACAACCAGAAGAGAGTGGTAGCCCTGTGCAGCTGTCTAAGGTTCCCTTCACAGCATTGTTTATTTTCAATTATCTTTGTTTCTCGGTATCTTTTATCTAAACTTTGCAGTTGCTTCATCTATTAACAGTTTTTAGCGCGGGAGAAGGAGGATGGTACACGACGGAGTGCTGTCTCTGGCAAGAAGGTGAAGGATCCATCTCTTACTTGTTTTTGCCCATGTTTTGGAGTGCTTTTGACATGGTTGAGAACACTTTTGCCTTGATCAAAAGCACTTGTCAGTTGTCACTCATACTCACCAGGTCTGGGAGATTTAAGAAGGACTTTGAAAAAAGTCGGTAGCAAAATTTAATAGAGCTTAGTGAGAAGAGAACTACTTGTAGAGTACTGTGGTAGTTATCATCATTATTATTATTATTTTGCAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

ATGGCGGCCTCATCTTCCTCTGTGACATCCTACACTTCTGATTCATCGTCTTCTTCTCGCCGTCGTCGTCGCCGGAGGACTCGCCGTGAAAAAGATCGGGACACGCTTAGGGTTCGCAAGAAGTCTCGCTCTCATTCTAAACGCCATCTTAGGCACCGCCGTTCCTCTGATTCTCTCTCTTCCTCCGACTCTGAATCCGATTACTCCCGAAGTAATAGCTCTTCTCAAAGCGAGCCTGAAACGTCGGGCCGTTCAAAGCGGCATAAGAAGAATGATAGATTGAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGCCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAACAACCAGAAGAGAGTGGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCGCGGGAGAAGGAGGATGGTACACGACGGAGTGCTGTCTCTGGCAAGAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

Coding sequence (CDS)

ATGGCGGCCTCATCTTCCTCTGTGACATCCTACACTTCTGATTCATCGTCTTCTTCTCGCCGTCGTCGTCGCCGGAGGACTCGCCGTGAAAAAGATCGGGACACGCTTAGGGTTCGCAAGAAGTCTCGCTCTCATTCTAAACGCCATCTTAGGCACCGCCGTTCCTCTGATTCTCTCTCTTCCTCCGACTCTGAATCCGATTACTCCCGAAGTAATAGCTCTTCTCAAAGCGAGCCTGAAACGTCGGGCCGTTCAAAGCGGCATAAGAAGAATGATAGATTGAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGCCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAACAACCAGAAGAGAGTGGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCGCGGGAGAAGGAGGATGGTACACGACGGAGTGCTGTCTCTGGCAAGAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

Protein sequence

MAASSSSVTSYTSDSSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRRSSDSLSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEKQPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

Homology

[Close]

BLAST of CcUC03G058710 vs. NCBI nr
Match: XP_038879353.1 (NKAP family protein [Benincasa hispida] >XP_038879354.1 NKAP family protein [Benincasa hispida] >XP_038879355.1 NKAP family protein [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-68
Identity = 171/182 (93.96%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAASSSS TSYTSD SSSSSRRRRRRR RREKDRDTLRVRKKSRSHSKRH RHRR SSDS
Sbjct: 1   MAASSSSATSYTSDSSSSSSRRRRRRRARREKDRDTLRVRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDYSR+NSSSQSEPETSGRSKRHK+NDR K+DKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRTNSSSQSEPETSGRSKRHKRNDRAKRDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEES SPVQLSKFLAREK+DGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180

[Close]

BLAST of CcUC03G058710 vs. NCBI nr
Match: XP_008450603.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66
Identity = 168/182 (92.31%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAASSS+ TS +SD SSSSSRRRRRRRTRREKDRDTLR+RKKSRSHSKRH RHRR SSDS
Sbjct: 1   MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDY+RSNSSS+SEPETS RSKRHKKNDR KKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEES SPVQLSKFLAREK+DGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180

[Close]

BLAST of CcUC03G058710 vs. NCBI nr
Match: XP_022136184.1 (serine/arginine-rich splicing factor 11 [Momordica charantia])

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63
Identity = 165/183 (90.16%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAASSSS TS+TSD SSSSSRRRRRRR+RR+KDRD LR+RKKSRSHSKR  RHRR SSDS
Sbjct: 1   MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSES+YSRS SSSQSEPETSGRSKRHKKNDR KKDKERERS+SHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHHKRRKHKAKEK 120

Query: 121 QPEE-SGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE S SPVQLSKFLAREK+DG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180

[Close]

BLAST of CcUC03G058710 vs. NCBI nr
Match: XP_031738322.1 (NKAP family protein isoform X1 [Cucumis sativus] >KAE8653363.1 hypothetical protein Csa_007551 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 5.4e-63
Identity = 163/182 (89.56%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAA+SS+ TS +SD SSSSSRRRRRR+TRR+KDRDTLR+RKKSRSHSKRH RHRR SSDS
Sbjct: 1   MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSS+DSESDYSR NSSS+SEPETS RSKRHKKNDR KKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSTDSESDYSR-NSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEES SPVQLSKFLAREK+DGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSS 180

[Close]

BLAST of CcUC03G058710 vs. NCBI nr
Match: XP_011659818.1 (NKAP family protein isoform X2 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-62
Identity = 161/182 (88.46%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAA+SS+ TS +SD SSSSSRRRRRR+TRR+KDRDTLR+RKKSRSHSKRH RHRR SSDS
Sbjct: 1   MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSS+DSESDYSR   SS+SEPETS RSKRHKKNDR KKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSTDSESDYSR---SSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEES SPVQLSKFLAREK+DGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSS 179

[Close]

BLAST of CcUC03G058710 vs. ExPASy TrEMBL
Match: A0A1S3BQ85 (peptidyl-prolyl cis-trans isomerase G OS=Cucumis melo OX=3656 GN=LOC103492142 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 8.7e-67
Identity = 168/182 (92.31%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAASSS+ TS +SD SSSSSRRRRRRRTRREKDRDTLR+RKKSRSHSKRH RHRR SSDS
Sbjct: 1   MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDY+RSNSSS+SEPETS RSKRHKKNDR KKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEES SPVQLSKFLAREK+DGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180

[Close]

BLAST of CcUC03G058710 vs. ExPASy TrEMBL
Match: A0A6J1C3K8 (serine/arginine-rich splicing factor 11 OS=Momordica charantia OX=3673 GN=LOC111007940 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.0e-64
Identity = 165/183 (90.16%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAASSSS TS+TSD SSSSSRRRRRRR+RR+KDRD LR+RKKSRSHSKR  RHRR SSDS
Sbjct: 1   MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSES+YSRS SSSQSEPETSGRSKRHKKNDR KKDKERERS+SHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHHKRRKHKAKEK 120

Query: 121 QPEE-SGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE S SPVQLSKFLAREK+DG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180

[Close]

BLAST of CcUC03G058710 vs. ExPASy TrEMBL
Match: A0A0A0LVZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569230 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.9e-62
Identity = 161/182 (88.46%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAA+SS+ TS +SD SSSSSRRRRRR+TRR+KDRDTLR+RKKSRSHSKRH RHRR SSDS
Sbjct: 1   MAATSSAATSNSSDSSSSSSRRRRRRKTRRDKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSS+DSESDYSR   SS+SEPETS RSKRHKKNDR KKDKERERSRSHHHKRRKHKAKEK
Sbjct: 61  LSSTDSESDYSR---SSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 180
           QPEES SPVQLSKFLAREK+DGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSS
Sbjct: 121 QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEETKRNELLKFLNSS 179

[Close]

BLAST of CcUC03G058710 vs. ExPASy TrEMBL
Match: A0A6J1HZG5 (probable splicing factor, arginine/serine-rich 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 9.6e-58
Identity = 161/183 (87.98%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAASSSS + YTSD SSSSSRRRRRRRTRREKDRD LR+RKKSRSHSKR  RHRR SS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS+SSSQSEPE SGRSKRHKKND  K  KERERS+S HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--KERERSKSQHHKRRKHKAKEK 120

Query: 121 QPEE-SGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE S SPVQLSKFLARE +DGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180

[Close]

BLAST of CcUC03G058710 vs. ExPASy TrEMBL
Match: A0A6J1I4D4 (NKAP family protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.6e-57
Identity = 160/183 (87.43%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MAASSSSVTSYTSD-SSSSSRRRRRRRTRREKDRDTLRVRKKSRSHSKRHLRHRR-SSDS 60
           MAASSSS + YTSD SSSSSRRRRRRRTRREKDRD LR+RKKSRSHSKR  RHRR SS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS+SSSQSEPE SGRSKRHKKND  KK   RERS+S HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK---RERSKSQHHKRRKHKAKEK 120

Query: 121 QPEE-SGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 180
           QPEE S SPVQLSKFLARE +DGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNS 179

[Close]

BLAST of CcUC03G058710 vs. TAIR 10
Match: AT5G27860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 108/182 (59.34%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 2   AASSSSVTSYTSDSSSSSRRR--RRRRTRREKDRDTLRVRKKSRSHSKRHLRHRRSSDSL 61
           A+SSSS +  +SDSS S RRR  RR   R ++DRD+L+VRKKSRS SK+  R + SSDS 
Sbjct: 3   ASSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRRRQHSSDS- 62

Query: 62  SSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK- 121
                 SD S S+SSS+S      +S+RHKK+++ KK K++ERS+SH HKR K++ ++K 
Sbjct: 63  ------SDSSYSDSSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKG 122

Query: 122 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 181
           + E S  PV+LSKFL R+K+DG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+S
Sbjct: 123 EGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNAS 177

[Close]

BLAST of CcUC03G058710 vs. TAIR 10
Match: AT5G27860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 23049 Blast hits to 11981 proteins in 648 species: Archae - 2; Bacteria - 589; Metazoa - 13464; Fungi - 1977; Plants - 1635; Viruses - 89; Other Eukaryotes - 5293 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 108/182 (59.34%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 2   AASSSSVTSYTSDSSSSSRRR--RRRRTRREKDRDTLRVRKKSRSHSKRHLRHRRSSDSL 61
           A+SSSS +  +SDSS S RRR  RR   R ++DRD+L+VRKKSRS SK+  R + SSDS 
Sbjct: 3   ASSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRRRQHSSDS- 62

Query: 62  SSSDSESDYSRSNSSSQSEPETSGRSKRHKKNDRLKKDKERERSRSHHHKRRKHKAKEK- 121
                 SD S S+SSS+S      +S+RHKK+++ KK K++ERS+SH HKR K++ ++K 
Sbjct: 63  ------SDSSYSDSSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKG 122

Query: 122 QPEESGSPVQLSKFLAREKEDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSS 181
           + E S  PV+LSKFL R+K+DG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+S
Sbjct: 123 EGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNAS 177

The following BLAST results are available for this feature:

BLAST of CcUC03G058710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879353.1	3.3e-68	93.96	NKAP family protein [Benincasa hispida] >XP_038879354.1 NKAP family protein [Ben...	[more]
XP_008450603.1	1.8e-66	92.31	PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]	[more]
XP_022136184.1	1.9e-63	90.16	serine/arginine-rich splicing factor 11 [Momordica charantia]	[more]
XP_031738322.1	5.4e-63	89.56	NKAP family protein isoform X1 [Cucumis sativus] >KAE8653363.1 hypothetical prot...	[more]
XP_011659818.1	6.0e-62	88.46	NKAP family protein isoform X2 [Cucumis sativus]	[more]

BLAST of CcUC03G058710 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC03G058710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQ85	8.7e-67	92.31	peptidyl-prolyl cis-trans isomerase G OS=Cucumis melo OX=3656 GN=LOC103492142 PE...	[more]
A0A6J1C3K8	9.0e-64	90.16	serine/arginine-rich splicing factor 11 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0LVZ3	2.9e-62	88.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569230 PE=4 SV=1	[more]
A0A6J1HZG5	9.6e-58	87.98	probable splicing factor, arginine/serine-rich 7 isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1I4D4	3.6e-57	87.43	NKAP family protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 ...	[more]

BLAST of CcUC03G058710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27860.1	1.2e-33	59.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G27860.2	1.2e-33	59.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..54
None	No IPR available	PANTHER	PTHR35760	SI:CH211-22I13.2	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G058710.1	CcUC03G058710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016853	isomerase activity