CcUC03G054550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G054550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ADP/ATP translocase
Location	CicolChr03: 25610183 .. 25612218 (+)
RNA-Seq Expression	CcUC03G054550
Synteny	CcUC03G054550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGACTCATCAACTCCCTCACCAGTAATATCACCTTTGTCACCATCCACTCAATCAACCCCAACCTGGTCCACTTCTTCACCTTCCACAGCATCATCTATATCACCTTCAACCCCTCTATCCAACCGTAATTCCTCATCATCATCTCAACCCAACACTATAACCTCCCTACCGACCAACATTCACCCCATGACAACCAGAGCCAAAATCGGTATCTCCAAACCTCATCAATTTTATGGTTGTCTTGCCCAACTTCCTACCTCTCACGATTGGTCTCAACTTGAACCTACTTCCTACCATGAAGTTGCCTCTTCTTCATTCTGGCGTCAAGCTATGGATAGTAAGTTTCAAGCTCTTCAATTCAATCATGCATGGGAGTTGGTACCTTACGCTGCTGCTCACAATATTGTGGATAGTAAATGGGTATATAGAATCAAAAGAAATGCTGCTGGTAACATTCAACGGTACAAAGCAAGGCTTGTTGCTTGGAGATACCTTAAGAACCTGGAGTTGATTATGAAGAAACTTATAGTCCAATTATTAAACCAACCTCCATTCGCTTAGTGTTTACAATGACACTAACTCGAAAATGGCCCATACAACAGCTAGATGTTAGTAATGCCTTTTTACATGGAACTCTCAAGGAAGAAGTTTATATCTCTCAACCTCAAAGCTATGTGAATCCCAAGTTTCCTCATCATGTTTGCAAACTTCGTAAGGCTCTTTATGGCCTTAAACAAGCCCCTCATGCATGGTATGAAGAGCTTCAATCCTTTTTACTCTGTGGAAATTTCATTCAATCCAAAGCAGATCTATCCCTTTTCATATACAACTCCTCAAAAGGCACCATTTTTCTACTTGTCTATGTCGATGACATCATTTTAACCGATTCTTCTCAACATCTTCTCTTCTCCTACATTTTGGAGTTACAACACACCTTTGTTGTCAAAGATCTTGGCAGTCTGCATTATTTCCTTGGAATTCAAGCACATTTTACTAATCATGGCCTTATTCTTTCTCAAACCAAATATATTCAAGATCTTCTTGCTCGCCTCAATTTTCAACACCTTAAACTGGCACCTTCTCCTATGATTACGGGCAAACATCTCTCAATTTGATTGTGATCTCATGCCTAATCCTCAACTTTATCAAAGCATGCTGGGATCTCTTCAATATCTTCAACATCGCGACCTAGCATTGCCTTTGCGGTCAATAAACTCAGTCAGTTTAATCAACATCCCACAATCATTCATTGGAGTGCTCTTAAACGTGATCTTCGTTACCTACAAGGCACACTTTCTTTTGGTTTGTGCCTTTCTCCCGCTCCCTCCCTCCACCTTAAAGTGTATTCAGATACTAACTAGGCATCTTCTCTCGATGATCGAAAGTCTATTGGTGGACATTGTATTCTCTTTGGCAATTCTCTTATTTCCTGATGCTCCAAAAAGCAAAGTGTTGTTGCCCGATCTAGTACTAAATTTGAGTACCGAGCTCTCTCACATGCTGCATGTAAATTATTGTGGATATGAGCATTACTTAAGGATCTTTATGCGACATAACACTGCTATGATATATTGTCGGACAAGTAAATCCTTTAACTTGTGTTGACTTACAATTATTTATTGACAGTAGGTAAGTCCACCTAATTCTCGGGTTAGTTAGGATTTTTCTTCTCTTTCACATCATTAATTGTGTATTTATAGTAAGGCTCCTTTGCATATGTGAATATGAGGAGTTTGAGTAATTTTACAGCAGATAACATTTACTCACTTCCTTCTATCTCTCTGCCTTCTCTCTCTGTCTCGCTGAAGCATTTACCTTCTTCATTATATCTCTCTGTCTCGCTGCCTCCTCTCTCTGTCTCGCTACCTCTTTTAAATTCAAACTTAGAGGATGCCTATGATCTTGAAATGGGGGATTCAAGATCAATTCTGATTTCACCACGACCTTGCAAATGGCTGATGAATTTCCATCATGATTTGTCGACGGTGGCTTTCATGGGCGGACTTGTACACACAATCGTTGCCCCAATTGAG

mRNA sequence

CATGACTCATCAACTCCCTCACCAGTAATATCACCTTTGTCACCATCCACTCAATCAACCCCAACCTGGTCCACTTCTTCACCTTCCACAGCATCATCTATATCACCTTCAACCCCTCTATCCAACCGTAATTCCTCATCATCATCTCAACCCAACACTATAACCTCCCTACCGACCAACATTCACCCCATGACAACCAGAGCCAAAATCGGCTCCTTTGCATATGTGAATATGAGGAGTTTGAGTAATTTTACAGCAGATAACATTTACTCACTTCCTTCTATCTCTCTGCCTTCTCTCTCTGTCTCGCTGAAGCATTTACCTTCTTCATTATATCTCTCTGTCTCGCTGCCTCCTCTCTCTGTCTCGCTACCTCTTTTAAATTCAAACTTAGAGGATGCCTATGATCTTGAAATGGGGGATTCAAGATCAATTCTGATTTCACCACGACCTTGCAAATGGCTGATGAATTTCCATCATGATTTGTCGACGGTGGCTTTCATGGGCGGACTTGTACACACAATCGTTGCCCCAATTGAG

Coding sequence (CDS)

CATGACTCATCAACTCCCTCACCAGTAATATCACCTTTGTCACCATCCACTCAATCAACCCCAACCTGGTCCACTTCTTCACCTTCCACAGCATCATCTATATCACCTTCAACCCCTCTATCCAACCGTAATTCCTCATCATCATCTCAACCCAACACTATAACCTCCCTACCGACCAACATTCACCCCATGACAACCAGAGCCAAAATCGGCTCCTTTGCATATGTGAATATGAGGAGTTTGAGTAATTTTACAGCAGATAACATTTACTCACTTCCTTCTATCTCTCTGCCTTCTCTCTCTGTCTCGCTGAAGCATTTACCTTCTTCATTATATCTCTCTGTCTCGCTGCCTCCTCTCTCTGTCTCGCTACCTCTTTTAAATTCAAACTTAGAGGATGCCTATGATCTTGAAATGGGGGATTCAAGATCAATTCTGATTTCACCACGACCTTGCAAATGGCTGATGAATTTCCATCATGATTTGTCGACGGTGGCTTTCATGGGCGGACTTGTACACACAATCGTTGCCCCAATTGAG

Protein sequence

HDSSTPSPVISPLSPSTQSTPTWSTSSPSTASSISPSTPLSNRNSSSSSQPNTITSLPTNIHPMTTRAKIGSFAYVNMRSLSNFTADNIYSLPSISLPSLSVSLKHLPSSLYLSVSLPPLSVSLPLLNSNLEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE

Homology

[Close]

BLAST of CcUC03G054550 vs. NCBI nr
Match: XP_023547314.1 (probable ADP,ATP carrier protein At5g56450 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 81.6 bits (200), Expect = 7.4e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +EDA DLEMGDSRS+ ISPR  KW++NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDADDLEMGDSRSVPISPRAYKWMVNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. NCBI nr
Match: XP_022962020.1 (probable ADP,ATP carrier protein At5g56450 [Cucurbita moschata] >KAG6598290.1 putative ADP,ATP carrier protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.6 bits (200), Expect = 7.4e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +EDA DLEMGDSRS+ ISPR  KW++NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDADDLEMGDSRSVPISPRAYKWMVNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. NCBI nr
Match: KAG7029262.1 (putative ADP,ATP carrier protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 81.6 bits (200), Expect = 7.4e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +EDA DLEMGDSRS+ ISPR  KW++NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDADDLEMGDSRSVPISPRAYKWMVNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. NCBI nr
Match: XP_038884164.1 (probable ADP,ATP carrier protein At5g56450 [Benincasa hispida])

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11
Identity = 39/50 (78.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +EDA DLEMGDSRSI ISPR  KW+ NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDADDLEMGDSRSIPISPRAYKWVTNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. NCBI nr
Match: XP_008444459.1 (PREDICTED: probable ADP,ATP carrier protein At5g56450 [Cucumis melo] >KAA0061002.1 putative ADP,ATP carrier protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-11
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +ED  DLEMGDSRSI +SPR  KWL NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDGDDLEMGDSRSIPVSPRAYKWLTNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. ExPASy TrEMBL
Match: A0A6J1HDV4 (ADP/ATP translocase OS=Cucurbita moschata OX=3662 GN=LOC111462612 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.6e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +EDA DLEMGDSRS+ ISPR  KW++NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDADDLEMGDSRSVPISPRAYKWMVNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. ExPASy TrEMBL
Match: A0A5A7UYM7 (ADP/ATP translocase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001370 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-11
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +ED  DLEMGDSRSI +SPR  KWL NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDGDDLEMGDSRSIPVSPRAYKWLTNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. ExPASy TrEMBL
Match: A0A1S3BB53 (ADP/ATP translocase OS=Cucumis melo OX=3656 GN=LOC103487779 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-11
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +ED  DLEMGDSRSI +SPR  KWL NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDGDDLEMGDSRSIPVSPRAYKWLTNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. ExPASy TrEMBL
Match: A0A0A0LKE3 (ADP/ATP translocase OS=Cucumis sativus OX=3659 GN=Csa_2G351660 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +EDA DLEMGDSRSI +SPR   WL NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDADDLEMGDSRSIPVSPRTYNWLTNFHRDLLAGAFMGGLVHTIVAPIE 52

[Close]

BLAST of CcUC03G054550 vs. ExPASy TrEMBL
Match: A0A6J1K992 (ADP/ATP translocase OS=Cucurbita maxima OX=3661 GN=LOC111492262 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-11
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 131 LEDAYDLEMGDSRSILISPRPCKWLMNFHHDLSTVAFMGGLVHTIVAPIE 181
           +EDA DLEM DSRS+ ISPR  KW++NFH DL   AFMGGLVHTIVAPIE
Sbjct: 3   VEDADDLEMRDSRSVPISPRAYKWMVNFHRDLLAGAFMGGLVHTIVAPIE 52

The following BLAST results are available for this feature:

BLAST of CcUC03G054550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547314.1	7.4e-12	76.00	probable ADP,ATP carrier protein At5g56450 [Cucurbita pepo subsp. pepo]	[more]
XP_022962020.1	7.4e-12	76.00	probable ADP,ATP carrier protein At5g56450 [Cucurbita moschata] >KAG6598290.1 pu...	[more]
KAG7029262.1	7.4e-12	76.00	putative ADP,ATP carrier protein, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_038884164.1	1.3e-11	78.00	probable ADP,ATP carrier protein At5g56450 [Benincasa hispida]	[more]
XP_008444459.1	2.1e-11	76.00	PREDICTED: probable ADP,ATP carrier protein At5g56450 [Cucumis melo] >KAA0061002...	[more]

BLAST of CcUC03G054550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC03G054550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDV4	3.6e-12	76.00	ADP/ATP translocase OS=Cucurbita moschata OX=3662 GN=LOC111462612 PE=3 SV=1	[more]
A0A5A7UYM7	1.0e-11	76.00	ADP/ATP translocase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G...	[more]
A0A1S3BB53	1.0e-11	76.00	ADP/ATP translocase OS=Cucumis melo OX=3656 GN=LOC103487779 PE=3 SV=1	[more]
A0A0A0LKE3	1.4e-11	76.00	ADP/ATP translocase OS=Cucumis sativus OX=3659 GN=Csa_2G351660 PE=3 SV=1	[more]
A0A6J1K992	3.0e-11	74.00	ADP/ATP translocase OS=Cucurbita maxima OX=3661 GN=LOC111492262 PE=3 SV=1	[more]

BLAST of CcUC03G054550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G054550.1	CcUC03G054550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0140021	mitochondrial ADP transmembrane transport
biological_process	GO:1990544	mitochondrial ATP transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0005471	ATP:ADP antiporter activity