CcUC03G054380 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G054380
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Nuclear transcription factor Y subunit
Location	CicolChr03: 25197479 .. 25202232 (-)
RNA-Seq Expression	CcUC03G054380
Synteny	CcUC03G054380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATTTTGCATTTTTGGAATTCACCAAAAGGGATTAAATTTCAATCTCCCTCTTTTTCTTTTCTACTTTTCTTTTTTTTTAATTGTTATTATTATTATTATTGAATTCTCTCCGATTTCTCTTCTCCCCCATCGGATTTTTCCCTTTTCTCCATTTGGACGTTGCTCCAAATCCTTCCGGTAAGCTATTTTTCTTCAATTTTTTATTTTGCCTTTCTATGGCTGTATGTATATCTGGCCTTTGATTTCTAGGGTATTCGCGCAATTCGCTTTTTAAGGGATTCTTTTACTCTTTTTCGGGTTTTGGGTTTGTGGGTTGATTGATTTTGTAGGATTTAGTTTTGGTTTTGCGATTGTTGAGGAAATTGGAGATTATGTTATGGAAGTTGAAAGCTGATTGATGTGTGTTATGGATAAGAATTCCTGTGGTTCTCTGTTTTTCTTCGTTCTTCGGCTTCTTTTAGGGAGGATTTGAGGGTTTTTTTTTATGTGTTTTTTGTTTTTTTAGGTGTTTATGGAAGGTTACTGGATAATCATATGTTAGATGATCACAGATTTGAAACTGGATAAAGCATTTTAAAGATGATGATGGATAAAGGAACTGAAAATTTGCTTGTTACTTTTTTCGGTGGCTGGATTTCCTGATTCTAGCTAGTTCACTTTTGCATCATTTGAGTTACTAGAAACAGATAGCGGGTGGAATAATTCAGAGTCTTAACCTATAAACTGGATTTGCTGTTGATGTGAATTTAGTTCATGTAACTCTCTGTTAACTTGTGAATGACTATATTTATACTTAGTTTCTACTTTAATAACTTTAATGCGATATGGTAGGGGGACCAGAACTGAAGTGTTATTTCCTGAGATTAGTTATTTTTCTTCTTTGTTTATTTTAATTCTAATCATGCATCAAGTATGTGTGACTTGGGACTATGTTCTGTCCAATCTTAAAACAAGGCTAGGATGTTGGTGACCAACTATTTAGAGAAAATAGTTCTATTAATTGCAAGGTGAAGCTTTATAACTTCTCTAGGGTTGAGTATCTTTCAGGTTTTACTTTGTTCATTCATTTGGTGTATTAACTGATCATAAGGACGGGATCTATAAGTTCGTCTTATTGGTTTTGTTGATTAATTTGGGTTTTAACTAGGAATAGTTTCTGGGTTAACTTTATTTGGTTTGCTTTTGTTGGTCGAAAGAAATGCACTTGGTACAACTCCCAGTGATATGATGTGGTTAATAGTACTTTTTTGAGCTGTGTTTTTGGATATTTTGTGCCTTTTTGTCGCCCCAACTTAATGTGTTCTGCATCGTTTAAACAACTTTTGGAAAATTAAACCCTTAATTTTAAGATGTGTGCAGGGAAGAGGGGAGAGAGATGGGGGAGTGTAGCCATGCAGGAATCTAAATTGAGTGGTACATATTGCATAAAACAAAATAGATGTGGAGAACAATTTATTCAAAAGGCATTGAGAAGATGTAAATGTAATGGTACTGGATTGAATCATGAAAAACATTGGTATTGGAAAGATGTAATAGTACAGGACTGAATCATGAAAAATATGTTTTTTTTTTTTTGTTTTTTTTTTTTAATTTTTTATGTTGCAATTACTTTTAACTCCTTGCTGTTGCTAAAGTAGAGGGAGAAGAGAACTTTTCCCTAAAGAAAGAGACTGAAGATTTTAAGAGCTCCCCATCACCTGTGTGATTGGGTCAGATGGGCTTCTACCATTTTGGACCATGATAAAGGATCTGTGTTAGCTTTCAATTTACAGTTATCATAAATTAAAATGCTCGAAACAATGGGTAATGGATGATTTTGGAATCTAAGATTACAATTAATATGGAATAATACTTAAATTATAACTGGAGATAGGAAAGGGTGCTCTTTTTATTTTATTTTTTATTCTTTTGAACTATTGGTTATCAAAATTTACACTTTGTGGTAATTGAGAACTTGAGGTTCTTTTATTTGTTTCAAAGGGTCTGAAGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACAAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCCTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCGAAAGAAGCGCAAGCTACTGGATCTCCACATTCTGGTACATCATTAATCCATATCTCTTAGTGCAAGTTCTCTCTCCAATTAGCACCTCAGAGTCCTTGAGGTTTTCTGTTTTGTGCCTGACAATATTGAATCTTATCTGATTTGAAGGTGTTATTGTGAAATTGGAGAGAACAACTTTGGAAGTCAAAAGTTAACTCTGGTAGAATAATTTCTGAAAAAATCTTAAGAAGAAAACAATATAGAAAGAGAATGACCGTTTGTTGTTTTCACATATTTGTGTTTGATGGTTTTCTAAAGCAGCCATTCCATGCACAATGATAATTATTATGTCCATATTGTGATTTACTTTTATTACATTGTAACATATGAAAACTTTCATATTAAACTCACGATCAACTATTATTATATTATTATTATTCTTGTTGCTTTTCGTCTCTCTCTCTCTCTCTCTTGTAAAAACACCAAATGTCCCCTAATAACAATAGCATCTCAATGATTTCAGCGGGAAGCTACAGACTGGATGCTCAGAAGATGCAGCATGTTTCGTCCACTTTGCCAGCTATGCACGGTGAATGTGGGACGCAGTCCACTCAACTTGAACTTGTTGGTCACTCTATTGTAAGTTCGATTGCTGTCCAATCTTAGAAAATTCTTTATCTTGTTAGTACAAATATCATGCTTTTAGTCCCTAGTTTGAACATTCCAATAAAAAATTGGTCACGTTACAATTCTATAATTATATTAATGAATACTTTCTTGTGTTTCTTGTCATACTGTTGCAGGCTTGCGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGTCATCAGCCCTTGGTATGTAATTATCTGGACTACATACAATTGAGAGACTGGTTTCACTGTCATTATCTTTGCCATTACTCAGCTGTCCTCATCTATCATAGTGTTGAAATCAAAAGCAAAATGACACTTCTAATTCACACATGTAGTACTCTTGAAATCGAACTTCGAGTCCCAGTGCATGTGCAAAAGGGTTTTGGTCCAACTTCATGAAAAATGGTGCTTGTGCTTCTAAACCTGTTGAATGCAATTTGTTTGTTGTCATACATCAGTTAAATTTTTGCTTTTATTTTGAAAGTCATTTTTGTGAATGTTTCATGAAATATTACACCGACTGTTGAGTGGCTACTGTGATGATTTGACGTAGGACCTACACTTTTACATCCTATGCTTTTCATAGTATGGTTAGCTAGCTCAAAGGACACTTCTGAAATTTATACTCATCCAATTTTTTTTACTCACTGTGTAGTTTGTCTGCAGGGGTTATTGCATTGTGTTCCTCCTATCTTCAATTATTTAATGAAAGCTGCTTTTTTTTCCCCCATAAACCCTAAAATGAATGTATCATGTGATAATTCATTGTATCTAATATAGCTTTCAGAATACACAGAGTGCCGATGCTGCTTTGCACAAAGTCTTAACAAAATTCTCATGCTTTGTAGTTTATTTTTGTCATGGACAGGGCTATCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGGTGGATTTTGTATCTTTTTGGACTGGATTGTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGTGGTAGGTGCTATAGTTACTCCCACTAGCTTAATATATACAAAAGAATTCCAATTTTTTGGCCACGTTGCTCACTTTTCTTATTCAACAGCCATACCTTCATGAGTCTAGACATCAGCATGCCATAAGAAGGTCAAGGAGTAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGACCTCAGAATAGCAACAGGTGAATGCGGAGACAATGGCCGAAATTGGTTGGTGGGGAGGGATCAATTGCTTGTTTGTTAAGAGTATTACCGCGTTCCTAGCAAGCACTCGAGGTGGCAAATCATTCTTGGCTTTGTTCTGTCGTTTTGAAGAAAAAGAAAAATGAATGTGGAATGAAATGTGACTTGCAGGATCTCATTGCTTCAAAGGATTTCCTCAAAAGTCCAAGAGATTTCTTCATTTCATTCTCTTTTTTTGCCTTTTTGTACAGAGTTTATGATGACTTAAGGAGTGGGAACTTTGACCTCTTGTATGATATAGCAGAGTGAAACTAAATGAATCAGAAAGCTTAGGATAGATATAGAGATTGTGATTCACAAAGCTTACGCTTGAAAGATTTTAGATTTGAGTATTTAAGGTTGACAGATTATTGGTGCAAATTATAATTTTCAGGTAAAAGATGGATGGAGTTTAAATATCTTTCTTCAGCTTTGATGTCCACCATATGTATGTT

mRNA sequence

GAAATTTTGCATTTTTGGAATTCACCAAAAGGGATTAAATTTCAATCTCCCTCTTTTTCTTTTCTACTTTTCTTTTTTTTTAATTGTTATTATTATTATTATTGAATTCTCTCCGATTTCTCTTCTCCCCCATCGGATTTTTCCCTTTTCTCCATTTGGACGTTGCTCCAAATCCTTCCGGGTCTGAAGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACAAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCCTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCGAAAGAAGCGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACTGGATGCTCAGAAGATGCAGCATGTTTCGTCCACTTTGCCAGCTATGCACGGTGAATGTGGGACGCAGTCCACTCAACTTGAACTTGTTGGTCACTCTATTGCTTGCGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGTCATCAGCCCTTGGGCTATCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGGTGGATTTTCCATACCTTCATGAGTCTAGACATCAGCATGCCATAAGAAGGTCAAGGAGTAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGACCTCAGAATAGCAACAGGTGAATGCGGAGACAATGGCCGAAATTGGTTGGTGGGGAGGGATCAATTGCTTGTTTGTTAAGAGTATTACCGCGTTCCTAGCAAGCACTCGAGGTGGCAAATCATTCTTGGCTTTGTTCTGTCGTTTTGAAGAAAAAGAAAAATGAATGTGGAATGAAATGTGACTTGCAGGATCTCATTGCTTCAAAGGATTTCCTCAAAAGTCCAAGAGATTTCTTCATTTCATTCTCTTTTTTTGCCTTTTTGTACAGAGTTTATGATGACTTAAGGAGTGGGAACTTTGACCTCTTGTATGATATAGCAGAGTGAAACTAAATGAATCAGAAAGCTTAGGATAGATATAGAGATTGTGATTCACAAAGCTTACGCTTGAAAGATTTTAGATTTGAGTATTTAAGGTTGACAGATTATTGGTGCAAATTATAATTTTCAGGTAAAAGATGGATGGAGTTTAAATATCTTTCTTCAGCTTTGATGTCCACCATATGTATGTT

Coding sequence (CDS)

ATGCAGTCAAAGTCTGAAACCAATAATCAGCTTGATCCAAATGGTGCTCCATCCACAAGTATCTATTATGAACCCTGGTGGCGTGGTATGGGGTACAATACTTTTCCGTTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCCTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAGTCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCGAAAGAAGCGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACTGGATGCTCAGAAGATGCAGCATGTTTCGTCCACTTTGCCAGCTATGCACGGTGAATGTGGGACGCAGTCCACTCAACTTGAACTTGTTGGTCACTCTATTGCTTGCGCATCAAATCCCTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGTCATCAGCCCTTGGGCTATCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGGTGGATTTTCCATACCTTCATGAGTCTAGACATCAGCATGCCATAAGAAGGTCAAGGAGTAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGACCTCAGAATAG

Protein sequence

MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESNDGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE

Homology

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BLAST of CcUC03G054380 vs. NCBI nr
Match: XP_008450423.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_008450424.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >KAA0056302.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa] >TYK18850.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 496.1 bits (1276), Expect = 1.9e-136
Identity = 256/272 (94.12%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR D +KMQHVSSTLPAMHGEC TQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGK
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEADGK 240

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
           E HSDKV+ESGYRLNDGSEQQ GSSL NK SE
Sbjct: 241 EKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CcUC03G054380 vs. NCBI nr
Match: XP_008450422.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 1.9e-136
Identity = 256/272 (94.12%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 22  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 81

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR D +KMQHVSSTLPAMHGEC TQSTQ
Sbjct: 82  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 141

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 142 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 201

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGK
Sbjct: 202 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEADGK 261

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
           E HSDKV+ESGYRLNDGSEQQ GSSL NK SE
Sbjct: 262 EKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of CcUC03G054380 vs. NCBI nr
Match: XP_004139033.1 (nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus] >KGN66486.1 hypothetical protein Csa_007630 [Cucumis sativus])

HSP 1 Score: 494.6 bits (1272), Expect = 5.5e-136
Identity = 256/272 (94.12%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR D QKMQHVSSTLPAMHGEC  QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EA+GK
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEAEGK 240

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
           E HSDKVNES YRLNDGSEQQNGSSLTNK SE
Sbjct: 241 EKHSDKVNESDYRLNDGSEQQNGSSLTNKASE 269

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BLAST of CcUC03G054380 vs. NCBI nr
Match: XP_038879324.1 (nuclear transcription factor Y subunit A-1-like [Benincasa hispida])

HSP 1 Score: 491.9 bits (1265), Expect = 3.6e-135
Identity = 256/272 (94.12%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR DAQKMQHVSSTLPAMHGEC TQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKKNE DGK
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKNEVDGK 240

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
               DKVNESGYRLN+GSEQQNGSSLTN+ SE
Sbjct: 241 ----DKVNESGYRLNEGSEQQNGSSLTNRASE 265

[Close]

BLAST of CcUC03G054380 vs. NCBI nr
Match: XP_022154358.1 (nuclear transcription factor Y subunit A-1-like [Momordica charantia])

HSP 1 Score: 473.8 bits (1218), Expect = 1.0e-129
Identity = 245/274 (89.42%), Postives = 254/274 (92.70%), Query Frame = 0


Query: 1   MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSE 60
           MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTS EFPNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQS 120
           SNDGQSVSNND+NDEEDDV+KE QATGSPHSAGSYRLDAQKMQHVSSTLPAMHGEC TQS
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEAD 240
           AKQYQGILRRRQARAKAEAEKKLIKARK   PYLHESRHQHAIRR+R SGGRFAKK+EA+
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARK---PYLHESRHQHAIRRTRGSGGRFAKKDEAN 240

Query: 241 GKEMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
             EMHSDK NESGY LNDGSEQ+NGSS  NK S+
Sbjct: 241 ENEMHSDKANESGYCLNDGSEQRNGSSSMNKASQ 271

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BLAST of CcUC03G054380 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.5e-48
Identity = 125/266 (46.99%), Postives = 165/266 (62.03%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+S + PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGT 120
           ESND  S S +  +N E D   K++QA  S  S  ++ ++       + ++  MH +   
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKN 240
           +VNAKQY+GILRRR+ARAKAE E+K+I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRK---PYLHESRHKHAMRRARASGGRFAKKS 240

Query: 241 EADGKEMHSDKVNESGYRLN-DGSEQ 261
           E +  E    +  E G   N  GSEQ
Sbjct: 241 EVEAGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of CcUC03G054380 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.7e-44
Identity = 135/284 (47.54%), Postives = 164/284 (57.75%), Query Frame = 0


Query: 1   MQSKSET-NNQLDP--NGAPSTSI-YYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGG 60
           M SKS++  N++D   +G  S+SI    PW R          V  G+ SS +        
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----A 65

Query: 61  SESNDGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGT 120
            ESN  +S SN D     + V+KE+Q T SP SAG Y    Q+  H   T P  H     
Sbjct: 66  LESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP---- 125

Query: 121 QSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDP 180
                +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+P
Sbjct: 126 -----QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEP 185

Query: 181 VFVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKK 240
           VFVNAKQYQ ILRRRQARAKAE EKKLIK+RK   PYLHESRHQHA+RR R +GGRFAKK
Sbjct: 186 VFVNAKQYQAILRRRQARAKAELEKKLIKSRK---PYLHESRHQHAMRRPRGTGGRFAKK 245

Query: 241 NEAD-----GKEMHSDKVNESGYRLN-DGSEQQNGSSLTNKTSE 273
              +      +E  +  V +S    N D  E  NG   T +  E
Sbjct: 246 TNTEASKRKAEEKSNGHVTQSPSSSNSDQGEAWNGDYRTPQGDE 268

[Close]

BLAST of CcUC03G054380 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21
Identity = 69/153 (45.10%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 97  AQKMQHVSSTLPAMHGECGTQSTQLELV-GHSIACASNPYQDPYYGGMMAFYGHQPLGYP 156
           A+K +  S T P +     ++S     V    +A    PY DPYY  + A   + P  YP
Sbjct: 16  AKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYP 75

Query: 157 -----MVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFP 216
                ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  + IKA+K   P
Sbjct: 76  GVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKK---P 135

Query: 217 YLHESRHQHAIRRSRSSGGRF--AKKNEADGKE 242
           Y+HESRH HAIRR R  GGRF  AKK   D KE
Sbjct: 136 YMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165

[Close]

BLAST of CcUC03G054380 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-20
Identity = 74/186 (39.78%), Postives = 98/186 (52.69%), Query Frame = 0


Query: 91  GSYRLDAQKMQHVSSTLPAMHGECGTQSTQLELV------GHSIACASNPYQDPYYGGMM 150
           GS+    Q+  H    +P+       +S    LV       +S+A    PY DPYY  + 
Sbjct: 13  GSHEKQEQRDSHFQPPIPSAR---NYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIF 72

Query: 151 AFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLI 210
           A       G    ++G     +PLP +  ++PVFVNAKQY GILRRRQ+RA+ E++ K+I
Sbjct: 73  APPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVI 132

Query: 211 KARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGKEMHSDKVNESGYRLNDGSEQQN 269
           K+RK   PYLHESRH HAIRR R  GGRF    + D  E H D  +E    L+ G     
Sbjct: 133 KSRK---PYLHESRHLHAIRRPRGCGGRFLNAKKED--EHHEDSSHEEKSNLSAGKSAMA 190

[Close]

BLAST of CcUC03G054380 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-19
Identity = 67/146 (45.89%), Postives = 86/146 (58.90%), Query Frame = 0


Query: 135 YQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQ 194
           Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ
Sbjct: 137 YADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQ 196

Query: 195 ARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRF-------AKKNEADGKEMH 254
            RAK EA+ KLI+ARK   PYLHESRH HA++R R SGGRF        +  +A  +E  
Sbjct: 197 QRAKLEAQNKLIRARK---PYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQE 256

Query: 255 SDKVNESGYRLNDGSEQQNGSSLTNK 270
            DK+ +   R  + S  +      NK
Sbjct: 257 QDKLGQQVNRKTNMSRFEAHMLQNNK 279

[Close]

BLAST of CcUC03G054380 vs. ExPASy TrEMBL
Match: A0A1S3BPV3 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.2e-137
Identity = 256/272 (94.12%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR D +KMQHVSSTLPAMHGEC TQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGK
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEADGK 240

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
           E HSDKV+ESGYRLNDGSEQQ GSSL NK SE
Sbjct: 241 EKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CcUC03G054380 vs. ExPASy TrEMBL
Match: A0A5D3D5Q2 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00430 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.2e-137
Identity = 256/272 (94.12%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR D +KMQHVSSTLPAMHGEC TQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGK
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEADGK 240

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
           E HSDKV+ESGYRLNDGSEQQ GSSL NK SE
Sbjct: 241 EKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CcUC03G054380 vs. ExPASy TrEMBL
Match: A0A1S3BP85 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.2e-137
Identity = 256/272 (94.12%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 22  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 81

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR D +KMQHVSSTLPAMHGEC TQSTQ
Sbjct: 82  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 141

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 142 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 201

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EADGK
Sbjct: 202 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEADGK 261

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
           E HSDKV+ESGYRLNDGSEQQ GSSL NK SE
Sbjct: 262 EKHSDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of CcUC03G054380 vs. ExPASy TrEMBL
Match: A0A0A0M2S3 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G613580 PE=3 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.7e-136
Identity = 256/272 (94.12%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTS EFPNGGSESN
Sbjct: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQSTQ 120
           DGQSVSNNDVNDEEDDVSKE QATGSPHSAGSYR D QKMQHVSSTLPAMHGEC  QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEADGK 240
           QYQGILRRRQARAKAEAEKK IKARK   PYLHESRHQHAIRRSRSSGGRFAKK+EA+GK
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARK---PYLHESRHQHAIRRSRSSGGRFAKKSEAEGK 240

Query: 241 EMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
           E HSDKVNES YRLNDGSEQQNGSSLTNK SE
Sbjct: 241 EKHSDKVNESDYRLNDGSEQQNGSSLTNKASE 269

[Close]

BLAST of CcUC03G054380 vs. ExPASy TrEMBL
Match: A0A6J1DK42 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111021642 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.9e-130
Identity = 245/274 (89.42%), Postives = 254/274 (92.70%), Query Frame = 0


Query: 1   MQSKSETNNQL--DPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGSE 60
           MQSKSETNNQL  DPNGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTS EFPNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGTQS 120
           SNDGQSVSNND+NDEEDDV+KE QATGSPHSAGSYRLDAQKMQHVSSTLPAMHGEC TQS
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKNEAD 240
           AKQYQGILRRRQARAKAEAEKKLIKARK   PYLHESRHQHAIRR+R SGGRFAKK+EA+
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARK---PYLHESRHQHAIRRTRGSGGRFAKKDEAN 240

Query: 241 GKEMHSDKVNESGYRLNDGSEQQNGSSLTNKTSE 273
             EMHSDK NESGY LNDGSEQ+NGSS  NK S+
Sbjct: 241 ENEMHSDKANESGYCLNDGSEQRNGSSSMNKASQ 271

[Close]

BLAST of CcUC03G054380 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-49
Identity = 125/266 (46.99%), Postives = 165/266 (62.03%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+S + PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGT 120
           ESND  S S +  +N E D   K++QA  S  S  ++ ++       + ++  MH +   
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKN 240
           +VNAKQY+GILRRR+ARAKAE E+K+I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRK---PYLHESRHKHAMRRARASGGRFAKKS 240

Query: 241 EADGKEMHSDKVNESGYRLN-DGSEQ 261
           E +  E    +  E G   N  GSEQ
Sbjct: 241 EVEAGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of CcUC03G054380 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-49
Identity = 125/266 (46.99%), Postives = 165/266 (62.03%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+S + PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGT 120
           ESND  S S +  +N E D   K++QA  S  S  ++ ++       + ++  MH +   
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKKN 240
           +VNAKQY+GILRRR+ARAKAE E+K+I+ RK   PYLHESRH+HA+RR+R+SGGRFAKK+
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRK---PYLHESRHKHAMRRARASGGRFAKKS 240

Query: 241 EADGKEMHSDKVNESGYRLN-DGSEQ 261
           E +  E    +  E G   N  GSEQ
Sbjct: 241 EVEAGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of CcUC03G054380 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-48
Identity = 129/268 (48.13%), Postives = 163/268 (60.82%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+S + PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPA--MHGEC 120
           ESND  S S +  +N E D   K++QA      A S R D   M+     L    MH + 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGMEGNDPALSIRNMHDQP 120

Query: 121 GTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQD 180
             Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+
Sbjct: 121 LVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE 180

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAK 240
           PV+VNAKQY+GILRRR+ARAKAE E+K+I+ RK   PYLHESRH+HA+RR+R+SGGRFAK
Sbjct: 181 PVYVNAKQYEGILRRRKARAKAELERKVIRDRK---PYLHESRHKHAMRRARASGGRFAK 240

Query: 241 KNEADGKEMHSDKVNESGYRLN-DGSEQ 261
           K+E +  E    +  E G   N  GSEQ
Sbjct: 241 KSEVEAGEDAGGRDRERGSATNSSGSEQ 256

[Close]

BLAST of CcUC03G054380 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-48
Identity = 129/268 (48.13%), Postives = 163/268 (60.82%), Query Frame = 0


Query: 1   MQSKSETNNQLDPN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+S + PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPA--MHGEC 120
           ESND  S S +  +N E D   K++QA      A S R D   M+     L    MH + 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGMEGNDPALSIRNMHDQP 120

Query: 121 GTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQD 180
             Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+
Sbjct: 121 LVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE 180

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAK 240
           PV+VNAKQY+GILRRR+ARAKAE E+K+I+ RK   PYLHESRH+HA+RR+R+SGGRFAK
Sbjct: 181 PVYVNAKQYEGILRRRKARAKAELERKVIRDRK---PYLHESRHKHAMRRARASGGRFAK 240

Query: 241 KNEADGKEMHSDKVNESGYRLN-DGSEQ 261
           K+E +  E    +  E G   N  GSEQ
Sbjct: 241 KSEVEAGEDAGGRDRERGSATNSSGSEQ 256

[Close]

BLAST of CcUC03G054380 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 179.1 bits (453), Expect = 4.8e-45
Identity = 135/284 (47.54%), Postives = 164/284 (57.75%), Query Frame = 0


Query: 1   MQSKSET-NNQLDP--NGAPSTSI-YYEPWWRGMGYNTFPLPVVGGNASSSTSPEFPNGG 60
           M SKS++  N++D   +G  S+SI    PW R          V  G+ SS +        
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----A 65

Query: 61  SESNDGQSVSNNDVNDEEDDVSKEAQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECGT 120
            ESN  +S SN D     + V+KE+Q T SP SAG Y    Q+  H   T P  H     
Sbjct: 66  LESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP---- 125

Query: 121 QSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDP 180
                +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+P
Sbjct: 126 -----QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEP 185

Query: 181 VFVNAKQYQGILRRRQARAKAEAEKKLIKARKVDFPYLHESRHQHAIRRSRSSGGRFAKK 240
           VFVNAKQYQ ILRRRQARAKAE EKKLIK+RK   PYLHESRHQHA+RR R +GGRFAKK
Sbjct: 186 VFVNAKQYQAILRRRQARAKAELEKKLIKSRK---PYLHESRHQHAMRRPRGTGGRFAKK 245

Query: 241 NEAD-----GKEMHSDKVNESGYRLN-DGSEQQNGSSLTNKTSE 273
              +      +E  +  V +S    N D  E  NG   T +  E
Sbjct: 246 TNTEASKRKAEEKSNGHVTQSPSSSNSDQGEAWNGDYRTPQGDE 268

The following BLAST results are available for this feature:

BLAST of CcUC03G054380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450423.1	1.9e-136	94.12	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]
XP_008450422.1	1.9e-136	94.12	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_004139033.1	5.5e-136	94.12	nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuc...	[more]
XP_038879324.1	3.6e-135	94.12	nuclear transcription factor Y subunit A-1-like [Benincasa hispida]	[more]
XP_022154358.1	1.0e-129	89.42	nuclear transcription factor Y subunit A-1-like [Momordica charantia]	[more]

BLAST of CcUC03G054380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	4.5e-48	46.99	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	6.7e-44	47.54	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.6e-21	45.10	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.0e-20	39.78	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	3.4e-19	45.89	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CcUC03G054380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPV3	9.2e-137	94.12	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A5D3D5Q2	9.2e-137	94.12	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BP85	9.2e-137	94.12	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A0A0M2S3	2.7e-136	94.12	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G61358...	[more]
A0A6J1DK42	4.9e-130	89.42	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CcUC03G054380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	3.2e-49	46.99	nuclear factor Y, subunit A1	[more]
AT5G12840.3	3.2e-49	46.99	nuclear factor Y, subunit A1	[more]
AT5G12840.2	1.6e-48	48.13	nuclear factor Y, subunit A1	[more]
AT5G12840.4	1.6e-48	48.13	nuclear factor Y, subunit A1	[more]
AT3G20910.1	4.8e-45	47.54	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 208..231 score: 68.52 coord: 174..196 score: 74.15
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 170..234 e-value: 1.3E-31 score: 121.1
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 174..231 e-value: 2.4E-23 score: 82.5
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 33..264
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 171..234 score: 32.139683
None	No IPR available	GENE3D	6.10.250.2430		coord: 171..236 e-value: 3.0E-27 score: 96.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..272
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 33..264
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 176..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G054380.1	CcUC03G054380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity