CcUC03G054330 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G054330
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCCHC-type domain-containing protein
LocationCicolChr03: 25125277 .. 25126050 (+)
RNA-Seq ExpressionCcUC03G054330
SyntenyCcUC03G054330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACTCTTTTTCAGGTCTTGCAGCTCCAAGAAATTCAATGGCGATCATTCTTTAGAAGATGAAGAATATGTTGAAAAAGGGAAAAGTTTAGTGAAATGGAAGATGCCAAAAGTCCCAACCCACAAAATCTATGAAGAAAGAAGAAAAAATACCTTCATTATTTTTTCTTCTAAAATTTATGATCGTTCCATCAGAACCACAGAAGGCCAAATCAGCTTTGGAAATGCAGGTGGAGTTTTTAGATTGTTTAATGAAACTCCTTTAATTGATGGTGGAGGATCAACATTCAACACAATGAACATAGGGCTTGTTCAAATTGGTGTCAAAACCCTAACAAGAAAAATCCCTTCAAATGCTTCGATAATTTTATGTCTTCGTGACAATAGAGTTGAAAAACTTGAAGATTCACTAATAGCTTTGGTTGAATCAAATTTAAGAGATGGACCATTTTATTTCAATGTTTTTCCAAACATAAACTTGTCTTTGTTTTCAACAATCACTAATGTTTTGAGTGTTCATGTTTTGGTCAAAGGGTTTGACCAGCTTCCAAAAGGGTGTGAGCCAATTGTAGTGACATGTAGAACATGTTACAAGTTCAATCAAAACAACTTTGGACCAGAGGCTTTGCTTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGACAGAGATTCTCGGAGATAATAATGATGTTGTTCAAAAAGTGACCATGTGGGACCAAGTTCATTTGCCTTCTAATTGGCCTCCTCAGCTGCGTTCATTTGCCTTCTAA

mRNA sequence

ATGTCACTCTTTTTCAGGTCTTGCAGCTCCAAGAAATTCAATGGCGATCATTCTTTAGAAGATGAAGAATATGTTGAAAAAGGGAAAAGTTTAGTGAAATGGAAGATGCCAAAAGTCCCAACCCACAAAATCTATGAAGAAAGAAGAAAAAATACCTTCATTATTTTTTCTTCTAAAATTTATGATCGTTCCATCAGAACCACAGAAGGCCAAATCAGCTTTGGAAATGCAGGTGGAGTTTTTAGATTGTTTAATGAAACTCCTTTAATTGATGGTGGAGGATCAACATTCAACACAATGAACATAGGGCTTGTTCAAATTGGTGTCAAAACCCTAACAAGAAAAATCCCTTCAAATGCTTCGATAATTTTATGTCTTCGTGACAATAGAGTTGAAAAACTTGAAGATTCACTAATAGCTTTGGTTGAATCAAATTTAAGAGATGGACCATTTTATTTCAATGTTTTTCCAAACATAAACTTGTCTTTGTTTTCAACAATCACTAATGTTTTGAGTGTTCATGTTTTGGTCAAAGGGTTTGACCAGCTTCCAAAAGGGTGTGAGCCAATTGTAGTGACATGTAGAACATGTTACAAGTTCAATCAAAACAACTTTGGACCAGAGGCTTTGCTTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGACAGAGATTCTCGGAGATAATAATGATGTTGTTCAAAAAGTGACCATGTGGGACCAAGTTCATTTGCCTTCTAATTGGCCTCCTCAGCTGCGTTCATTTGCCTTCTAA

Coding sequence (CDS)

ATGTCACTCTTTTTCAGGTCTTGCAGCTCCAAGAAATTCAATGGCGATCATTCTTTAGAAGATGAAGAATATGTTGAAAAAGGGAAAAGTTTAGTGAAATGGAAGATGCCAAAAGTCCCAACCCACAAAATCTATGAAGAAAGAAGAAAAAATACCTTCATTATTTTTTCTTCTAAAATTTATGATCGTTCCATCAGAACCACAGAAGGCCAAATCAGCTTTGGAAATGCAGGTGGAGTTTTTAGATTGTTTAATGAAACTCCTTTAATTGATGGTGGAGGATCAACATTCAACACAATGAACATAGGGCTTGTTCAAATTGGTGTCAAAACCCTAACAAGAAAAATCCCTTCAAATGCTTCGATAATTTTATGTCTTCGTGACAATAGAGTTGAAAAACTTGAAGATTCACTAATAGCTTTGGTTGAATCAAATTTAAGAGATGGACCATTTTATTTCAATGTTTTTCCAAACATAAACTTGTCTTTGTTTTCAACAATCACTAATGTTTTGAGTGTTCATGTTTTGGTCAAAGGGTTTGACCAGCTTCCAAAAGGGTGTGAGCCAATTGTAGTGACATGTAGAACATGTTACAAGTTCAATCAAAACAACTTTGGACCAGAGGCTTTGCTTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGACAGAGATTCTCGGAGATAATAATGATGTTGTTCAAAAAGTGACCATGTGGGACCAAGTTCATTTGCCTTCTAATTGGCCTCCTCAGCTGCGTTCATTTGCCTTCTAA

Protein sequence

MSLFFRSCSSKKFNGDHSLEDEEYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSKIYDRSIRTTEGQISFGNAGGVFRLFNETPLIDGGGSTFNTMNIGLVQIGVKTLTRKIPSNASIILCLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTITNVLSVHVLVKGFDQLPKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNNDVVQKVTMWDQVHLPSNWPPQLRSFAF
Homology
BLAST of CcUC03G054330 vs. NCBI nr
Match: KGN66493.1 (hypothetical protein Csa_007053 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 2.1e-105
Identity = 202/257 (78.60%), Postives = 221/257 (85.99%), Query Frame = 0

Query: 1   MSLFFRSCSSKKFNGDHSLEDEEYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSKI 60
           MSLFF+SCSSK F GDHSLE+EEYVEKGKSLVKWKMP+VP HKIYEERRKN F IF SK 
Sbjct: 1   MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSK- 60

Query: 61  YDRSIRTTEGQISFGNAGGVFRLFNETP---LIDGGGSTFNTMNIGLVQIGVKTLTRKIP 120
            D SIRTTEGQISFGN GG F+L+ +TP         S FNTMNIGLVQIGVKTLT+KIP
Sbjct: 61  NDPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIP 120

Query: 121 SNASIILCLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTITNVLSVHVL 180
            NASIILCLRDNR+EKLEDSL+ALVES L DGPFYFNVFPNINLSL FS+ITNVLSVHVL
Sbjct: 121 PNASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVL 180

Query: 181 VKGFDQLPKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEIL-GDNNDVVQK 240
           VKG D++PKG  PIVVTCRTCYK NQN+FG EAL+ESPVGKTVFFQ EI   D++DVVQK
Sbjct: 181 VKGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQK 240

Query: 241 VTMWDQVHLPSNWPPQL 253
           VTMW+QV LPS+WPP+L
Sbjct: 241 VTMWNQVQLPSDWPPRL 256

BLAST of CcUC03G054330 vs. NCBI nr
Match: KAG6590198.1 (hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.1 bits (954), Expect = 3.9e-99
Identity = 192/262 (73.28%), Postives = 211/262 (80.53%), Query Frame = 0

Query: 1   MSLFFRSCSSKKFNGDHSLEDEEYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSKI 60
           MSLFFRSCSS KF  DHSLEDEEYVEKG +LVKW MP VP HK+YE + K     FS+KI
Sbjct: 1   MSLFFRSCSS-KFVDDHSLEDEEYVEKGNNLVKWTMPNVPIHKLYEHQTKKKLFTFSTKI 60

Query: 61  YDRSIRTTEGQISFGNAGGVFRLFNETPLIDG-GGSTFNTMNIGLVQIGVKTLTRKIPSN 120
            DRSIR TEGQISFGN GG F+L+ + P   G  G  ++ MNIGLVQIGVKT+TRKIPSN
Sbjct: 61  -DRSIRITEGQISFGNGGGSFKLYKQAPSSYGQKGKFYSVMNIGLVQIGVKTITRKIPSN 120

Query: 121 ASIILCLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF--STITNVLSVHVLV 180
           ASIILC+RDNR+EK+EDS+IA+VES L DGPFYFNVFPN+N SLF  S I NVLSVHVLV
Sbjct: 121 ASIILCVRDNRIEKVEDSIIAMVESKLGDGPFYFNVFPNMNFSLFEASLIMNVLSVHVLV 180

Query: 181 KGFDQLPKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNN------- 240
           KGFDQL KG EPIVV+CRTCYK NQ  FGPEALLESPVGKTVFFQT+I+G  N       
Sbjct: 181 KGFDQLAKGSEPIVVSCRTCYKLNQTKFGPEALLESPVGKTVFFQTQIVGKLNGGGGGGG 240

Query: 241 DVVQKVTMWDQVHLPSNWPPQL 253
           DVVQKVT WDQV LPSNWPPQL
Sbjct: 241 DVVQKVTQWDQVQLPSNWPPQL 260

BLAST of CcUC03G054330 vs. NCBI nr
Match: KGN66494.1 (hypothetical protein Csa_006902 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 6.8e-51
Identity = 118/240 (49.17%), Postives = 157/240 (65.42%), Query Frame = 0

Query: 8   CSSKKF-NGDHSLEDEEYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSKIYDRSIR 67
           C S  F  G HSL+ EEY++KGK+L+KWK+PK+PT KIY   + N FI FS    D  I+
Sbjct: 5   CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIY---KSNPFIFFS----DPFIK 64

Query: 68  TTEGQISFGNAGGVFRLFNETPLIDGGGST--FNTMNIGLVQIGVKTLTRKIPSNASIIL 127
           T E  +   N   VFRL +  P++D       +  +N+G++QIGVKTLT KIPSNASIIL
Sbjct: 65  TKEETMPCENGSQVFRLISGNPMVDNFQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIIL 124

Query: 128 CLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF-STITNVLSVHVLVKGFDQL 187
           C+ D R +  EDS++ LVES L DGP +FN+FPNI + +F   +     +  +V+GF+QL
Sbjct: 125 CVFDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQL 184

Query: 188 PKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNNDVV-QKVTMWDQV 243
           P+G  PI +  RTCYK  Q +  P AL+ESP GKTVFFQT    +N+ V  QKV+ WD+V
Sbjct: 185 PQGTSPISLMWRTCYKL-QASALPTALIESPQGKTVFFQTNF--ENSKVADQKVSQWDEV 234

BLAST of CcUC03G054330 vs. NCBI nr
Match: KAG6588193.1 (hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-43
Identity = 111/256 (43.36%), Postives = 156/256 (60.94%), Query Frame = 0

Query: 6   RSCSSKKFNGDHSLEDEEY--VEKGK-SLVKWKMPKVPTHKIYEERRKNTFIIFSSKIYD 65
           R  S  K    H+L+ +EY  VEKGK  L+ W +P +PT KIY   + N F  FS    +
Sbjct: 6   RRSSCSKSASSHTLDTDEYDIVEKGKDDLLTWNIPTLPTSKIY---KTNLFTHFSR---N 65

Query: 66  RSIRTTEGQISFGNAGGVFRLFNETPLIDGGGSTFNTMNIGLVQIGVKTLTRKIPSNASI 125
             ++T EG     N GG   L  E   +    + + T++IG+VQIGVK LTR  P NA +
Sbjct: 66  SLLKTKEGNSPLSNGGGYLNLIREDDDLWHLQNKYRTIHIGMVQIGVKALTRG-PLNAKV 125

Query: 126 ILCLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFS-TITNVLSVHVLVKGFD 185
           +LCLRD R   L+DSL+ +VE+NL+DGP YFNVFPNI  SL +  + ++L ++  V+ F+
Sbjct: 126 LLCLRDARHRNLQDSLLGMVEANLKDGPLYFNVFPNIVESLSAPRLDDLLFLNAKVREFE 185

Query: 186 QLPKGCEPIVVTCRTCYKFNQNNFGPEALLESPV-GKTVFFQTEILGDNNDVVQKVTMWD 245
           QLP+G + IVV  R CYK  +       LL++P  G+T+FFQT+     ND  Q VT+W+
Sbjct: 186 QLPEGPKNIVVMYRVCYKVLKPGVETRVLLKTPSNGRTIFFQTDFETAMNDFEQGVTVWN 245

Query: 246 QVHLPSNWP-PQLRSF 256
           +V LP NWP P+ +S+
Sbjct: 246 EVQLPENWPTPRSKSY 254

BLAST of CcUC03G054330 vs. NCBI nr
Match: XP_038880673.1 (uncharacterized protein LOC120072292 [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-42
Identity = 106/245 (43.27%), Postives = 145/245 (59.18%), Query Frame = 0

Query: 1   MSLFFRSCSSKKF-NGDHSLEDEEYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSK 60
           M+  F+ C S  F  G H+L+ EEY++KG +L+KWK+PKVPT KIY   ++N F  FS  
Sbjct: 1   MATLFKPCCSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIY---KRNPFTFFS-- 60

Query: 61  IYDRSIRTTEGQISFGNAGGVFRLFNETPLIDGGGST--FNTMNIGLVQIGVKTLTRKIP 120
             D SI+T E ++S  N    FRL  + P++        + T+N+G++QIGVK +T KIP
Sbjct: 61  --DPSIKTEEEKMSCENGSQAFRLIAKNPIMASFNDNRFYTTINVGMIQIGVKIMTTKIP 120

Query: 121 SNASIILCLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFSTITNVLSVHVLV 180
           SNASIILC+ D+R E  ED+++ LVESNL                               
Sbjct: 121 SNASIILCVFDSRNENFEDAILGLVESNL------------------------------- 180

Query: 181 KGFDQLPKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNNDVVQKVT 240
            GF+QLP+G  PI +  RTCYK  ++   P ALLESP GKTV+FQT+ L ++   VQKV+
Sbjct: 181 -GFEQLPEGTRPISLMWRTCYKLQESAL-PNALLESPQGKTVYFQTD-LQNSKVAVQKVS 204

Query: 241 MWDQV 243
            WD+V
Sbjct: 241 KWDEV 204

BLAST of CcUC03G054330 vs. ExPASy TrEMBL
Match: A0A0A0LXM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.0e-105
Identity = 202/257 (78.60%), Postives = 221/257 (85.99%), Query Frame = 0

Query: 1   MSLFFRSCSSKKFNGDHSLEDEEYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSKI 60
           MSLFF+SCSSK F GDHSLE+EEYVEKGKSLVKWKMP+VP HKIYEERRKN F IF SK 
Sbjct: 1   MSLFFKSCSSKNFVGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSK- 60

Query: 61  YDRSIRTTEGQISFGNAGGVFRLFNETP---LIDGGGSTFNTMNIGLVQIGVKTLTRKIP 120
            D SIRTTEGQISFGN GG F+L+ +TP         S FNTMNIGLVQIGVKTLT+KIP
Sbjct: 61  NDPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIP 120

Query: 121 SNASIILCLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSL-FSTITNVLSVHVL 180
            NASIILCLRDNR+EKLEDSL+ALVES L DGPFYFNVFPNINLSL FS+ITNVLSVHVL
Sbjct: 121 PNASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVL 180

Query: 181 VKGFDQLPKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEIL-GDNNDVVQK 240
           VKG D++PKG  PIVVTCRTCYK NQN+FG EAL+ESPVGKTVFFQ EI   D++DVVQK
Sbjct: 181 VKGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQK 240

Query: 241 VTMWDQVHLPSNWPPQL 253
           VTMW+QV LPS+WPP+L
Sbjct: 241 VTMWNQVQLPSDWPPRL 256

BLAST of CcUC03G054330 vs. ExPASy TrEMBL
Match: A0A0A0LZS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.3e-51
Identity = 118/240 (49.17%), Postives = 157/240 (65.42%), Query Frame = 0

Query: 8   CSSKKF-NGDHSLEDEEYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSKIYDRSIR 67
           C S  F  G HSL+ EEY++KGK+L+KWK+PK+PT KIY   + N FI FS    D  I+
Sbjct: 5   CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIY---KSNPFIFFS----DPFIK 64

Query: 68  TTEGQISFGNAGGVFRLFNETPLIDGGGST--FNTMNIGLVQIGVKTLTRKIPSNASIIL 127
           T E  +   N   VFRL +  P++D       +  +N+G++QIGVKTLT KIPSNASIIL
Sbjct: 65  TKEETMPCENGSQVFRLISGNPMVDNFQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIIL 124

Query: 128 CLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLF-STITNVLSVHVLVKGFDQL 187
           C+ D R +  EDS++ LVES L DGP +FN+FPNI + +F   +     +  +V+GF+QL
Sbjct: 125 CVFDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQL 184

Query: 188 PKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNNDVV-QKVTMWDQV 243
           P+G  PI +  RTCYK  Q +  P AL+ESP GKTVFFQT    +N+ V  QKV+ WD+V
Sbjct: 185 PQGTSPISLMWRTCYKL-QASALPTALIESPQGKTVFFQTNF--ENSKVADQKVSQWDEV 234

BLAST of CcUC03G054330 vs. ExPASy TrEMBL
Match: A0A5D3D5V1 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 8.6e-36
Identity = 89/171 (52.05%), Postives = 117/171 (68.42%), Query Frame = 0

Query: 76  NAGGVFRLFNETPLIDG-GGSTFNTM-NIGLVQIGVKTLTRKIPSNASIILCLRDNRVEK 135
           N    FRL  + P++       F TM N+G++QIGVKTLT KIPSNASIILC+ D R + 
Sbjct: 5   NGSQAFRLIYDNPILASFQEKRFCTMLNMGMIQIGVKTLTTKIPSNASIILCVFDTRNDN 64

Query: 136 LEDSLIALVESNLRDGPFYFNVFPNINLSLF-STITNVLSVHVLVKGFDQLPKGCEPIVV 195
            EDS++ LVE+ L DGP +FN+FPNI +SLF   +   L +  +V+GF+QLP+G  PI +
Sbjct: 65  FEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTSPISL 124

Query: 196 TCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNNDV-VQKVTMWDQV 243
             RTCYK   + F P AL+ESP GKTVFFQT+   +N+ V VQKV+ WD+V
Sbjct: 125 MWRTCYKLQGSAF-PTALIESPQGKTVFFQTDF--ENSKVAVQKVSEWDEV 172

BLAST of CcUC03G054330 vs. ExPASy TrEMBL
Match: A0A5A7U9X3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 7.3e-35
Identity = 88/171 (51.46%), Postives = 116/171 (67.84%), Query Frame = 0

Query: 76  NAGGVFRLFNETPLIDG-GGSTFNTM-NIGLVQIGVKTLTRKIPSNASIILCLRDNRVEK 135
           N    FRL  + P++       F TM N+G++QIGVKTLT KI SNASIILC+ D R + 
Sbjct: 5   NGSQAFRLIYDNPILASFQEKRFCTMLNMGMIQIGVKTLTTKISSNASIILCVFDTRNDN 64

Query: 136 LEDSLIALVESNLRDGPFYFNVFPNINLSLF-STITNVLSVHVLVKGFDQLPKGCEPIVV 195
            EDS++ LVE+ L DGP +FN+FPNI +SLF   +   L +  +V+GF+QLP+G  PI +
Sbjct: 65  FEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTSPISL 124

Query: 196 TCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNNDV-VQKVTMWDQV 243
             RTCYK   + F P AL+ESP GKTVFFQT+   +N+ V VQKV+ WD+V
Sbjct: 125 MWRTCYKLQGSAF-PTALIESPQGKTVFFQTDF--ENSKVAVQKVSEWDEV 172

BLAST of CcUC03G054330 vs. ExPASy TrEMBL
Match: A0A224QT09 (Polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=ORF PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-23
Identity = 83/247 (33.60%), Postives = 129/247 (52.23%), Query Frame = 0

Query: 7   SCSSKKFNGDHSLEDE---EYVEKGKSLVKWKMPKVPTHKIYEERRKNTFIIFSSKIYDR 66
           SCSS+K  G  S+++     + +  KS+  WK+PKV   +IY      TF + S    D 
Sbjct: 17  SCSSEKSVGTMSVKNASSISFEDIEKSISNWKIPKVNIKEIY---HVGTFSLLS----DY 76

Query: 67  SIRTTEGQISFGNAGGVFRLFNETPLID-GGGSTFNTMNIGLVQIGVKTLTRKIPSNASI 126
            I+T E  I   +      L +E  +        ++ ++ GL+Q+ +++LTRK   N S+
Sbjct: 77  YIKTIEKTIPISSLHETLHLLSEREINSIRAKHQYHYLHFGLIQVAIRSLTRK-GLNVSV 136

Query: 127 ILCLRDNRVEKLEDSLIALVESNLRDGPFYFNVFPNINLSLFST-ITNVLSVHVLVKGFD 186
           + CLRD R ++ +DSL+ +VE++L +GP YFN FP+ ++SL  T I  VL++++   G+ 
Sbjct: 137 LACLRDCRNKRFKDSLLGMVEASLSNGPVYFNTFPDFSVSLSDTNIHKVLTLNLQTSGY- 196

Query: 187 QLPKGCEPIVVTCRTCYKFNQNNFGPEALLESPVGKTVFFQTEILGDNNDVVQKVTMWDQ 246
           +L  G E I VT R  YK       P A   +P G T   QT    +N     K   WD+
Sbjct: 197 ELEPGSENISVTYRVYYK-AMTTLAPCAKHYTPKGLTTLLQTN--PNNRCTTPKTLKWDE 251

Query: 247 VHLPSNW 249
           + LP  W
Sbjct: 257 ITLPEKW 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66493.12.1e-10578.60hypothetical protein Csa_007053 [Cucumis sativus][more]
KAG6590198.13.9e-9973.28hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN66494.16.8e-5149.17hypothetical protein Csa_006902 [Cucumis sativus][more]
KAG6588193.11.8e-4343.36hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038880673.12.0e-4243.27uncharacterized protein LOC120072292 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LXM31.0e-10578.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1[more]
A0A0A0LZS03.3e-5149.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1[more]
A0A5D3D5V18.6e-3652.05Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE... [more]
A0A5A7U9X37.3e-3551.46Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 P... [more]
A0A224QT092.2e-2333.60Polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=ORF PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028919Viral movement proteinPFAMPF01107MPcoord: 98..203
e-value: 1.4E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR46249FAMILY NOT NAMEDcoord: 96..250
coord: 1..76
NoneNo IPR availablePANTHERPTHR46249:SF37VIRAL MOVEMENT PROTEINcoord: 96..250
coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G054330.1CcUC03G054330.1mRNA