CcUC03G054070 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G054070
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr03: 24578363 .. 24579632 (-)
RNA-Seq Expression	CcUC03G054070
Synteny	CcUC03G054070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATTGAAGTTCAAAGTTTGGAAATTGTTTTTGAAGAAAATGATAAACAAGCTCAAATACATAAGGTTTGATTCTTCTCTTAAAATACTTTTTCTTCTAAATCTCATTGATTCTCATAGATAGAAGTCTATCGTTGTTTATCTTTTATAGAAAATAGTAATAGTGAATAAATTTTTTTTATTGCAGGAAATTGAAGTTGAAGGTGGGAAAATGGTTGTTGAAGATGATAATGAAGAAGTTGAAATACAAAAGGTTTGATTTTTTCCTTAAGCTAATTTGACTGGTTTGATTATTTTTTTGAGCTATTTGATTTTTTTTTTTTTTAACTACATTCTTTACTCAATGAAACTGATAGACATTGATAAAGATCTATCATTGTCTATCTTTGATAGAAAAAAAATAACAATTTGTATATATTTTATTACAAGAAACTGCAGTTGAAGGTATGGAAAATGAAGATAATAATGTAGAAGATGAAAATGATGAAAAAGAAAATAGAAGAAGAGAAAGCAAATCAAAACAATTAAGAGAATCTAATATATCTGGTGAGGAAGAAAATGTAAGAATGAAAAATAGATCAAAGCAAAAAAAAAATTGAGAAAAAGGTAAATATACTCAACAATAATTGTACAACATGTATATTTAAATAACTATATTATTGTTTTAGTGTCCATCCAAAAAGGATCTCATATCATTCTTTCTATCGGTGTCTAATCATATCATTCTTGCTAAGAAATTGTTGTTGTAGTCTTTTAAGTCTCTAAGTCTTATGAATAAATAGTAGGATAGACAGTGATTGATAGTAGTCTACTGCTATCTATTAAGGATAGATAGTGATAGATAGTAGTCTATAACTCTCAATCACAATAATAGGCTAAGAAAACTCTGTTGTGGTCTTCTAAGTCTTTAAGTCTTATTAATTGTGGGATAAATAGGAGGATAGACAGTGAGGATAACAGTGATAGATAGTAGTCTATCACTCTTTATCACAGTGATAGTGTTGTTGATATGTTGTTTTATTTCTTAAAAAAACTAAGTATCTCATATCATTCTTTTTATCGGTATCTATCGACCTTCTTCTTCTTCTTCTTCTTCTTCTGCTATCAGTATCACATATCATTGTTTTTATAAGTTGTTTTCTTGCAGCCTATTGAGGATGAACATCAAGTTTAGGAAGATAAACTTGAGGAAGACCAACCTCAAGTTGATGAAGAGATTGAAAAGAATCAAGAAATAGAAAAAATAGAAAAGCAAACAAGTGAAAAGAAG

mRNA sequence

GAAATTGAAGTTCAAAGTTTGGAAATTGTTTTTGAAGAAAATGATAAACAAGCTCAAATACATAAGGAAATTGAAGTTGAAGGTGGGAAAATGGTTGTTGAAGATGATAATGAAGAAGTTGAAATACAAAAGCCTATTGAGGATGAACATCAAGAAGATAAACTTGAGGAAGACCAACCTCAAGTTGATGAAGAGATTGAAAAGAATCAAGAAATAGAAAAAATAGAAAAGCAAACAAGTGAAAAGAAG

Coding sequence (CDS)

GAAATTGAAGTTCAAAGTTTGGAAATTGTTTTTGAAGAAAATGATAAACAAGCTCAAATACATAAGGAAATTGAAGTTGAAGGTGGGAAAATGGTTGTTGAAGATGATAATGAAGAAGTTGAAATACAAAAGCCTATTGAGGATGAACATCAAGAAGATAAACTTGAGGAAGACCAACCTCAAGTTGATGAAGAGATTGAAAAGAATCAAGAAATAGAAAAAATAGAAAAGCAAACAAGTGAAAAGAAG

Protein sequence

EIEVQSLEIVFEENDKQAQIHKEIEVEGGKMVVEDDNEEVEIQKPIEDEHQEDKLEEDQPQVDEEIEKNQEIEKIEKQTSEKK

Homology

The following BLAST results are available for this feature:

BLAST of CcUC03G054070 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC03G054070 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC03G054070 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC03G054070 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G054070.1	CcUC03G054070.1	mRNA