CcUC03G053850 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G053850
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein LATERAL ROOT PRIMORDIUM 1
Location	CicolChr03: 23917297 .. 23920191 (-)
RNA-Seq Expression	CcUC03G053850
Synteny	CcUC03G053850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAAGGTGTGGAATGTCATACGTGACAAAATAGAAGACAAACTATAAAACAAAAACTCTACCATCTTTGTCTATAAGAAAAATAAAACAAAAACCAAAACAAATATGCTTCCAAAATTTATGGTAAAAATGTTAAAGATAATTTTTTTTTTTAAAAAATAACAATAAATTAGCGATGTGAGTAAATTTAAGATTTATTAAAAATATTAAAAATAAATTGATCAAATAAAAGTATAGTACCTAAAATAGTGTTTAAGATAAATATATTTAATTCAATGGCGTATAAAATAGTACAATTGTGTCCCAGTGAGATTGAGACAAGGTTTTTAGAGAGACAAAGAAAAAGGTAAAAAAAGAATAGAAAAAAGAAAAAGTTGGCGATGGTATTAATGGCTGCAGATACTGTGAAAACTACAAAAGCACTTTTTAGTGTTTCTTGAATCCATTGACAACCAAAACATCCTTCTCTCAATTCTCATTTCTCAATCTCAATTCTCTCTAAATTACCAACAAAAGAAAAAGAAAAAAAATCATAGATCCATGTTGCTTCATCAGTAAATCTCAGATCCAATTTAGATTTGTTTTTTTTATAGAAAAGGAAAATTAATTTAGGGTTTTTCTTCTTCTTCGCCGGAGATTTACCAGCTGTGGCTGCCGCACGCCGTCTTCCATCCGATTCCGGTGCCTTTGCCGACTGGGTGGCTCCTCCCTCTGCCATAGTCGCCGATGAACTCTCCCTCGGTTTCAGTTCCGGCGCCACAGTTCCACCGGCCAGGATGTGGCCCTCGTCCAGACCACTTGCCGTCGGTTACGGCCACACCGCGGCGCCAGCGCCAGACATGGTGGGTCTCATGGCTTCGGGCTTTGGAGTCGGCGTTAGCGTTTTGCCTCTCCTTACCGGCCTTGCGCCATCGAGTGTAGGAATTGAAGAGGCTAATTTAATGATCAGCCGTGGCAGCAGCAGCAGTGGGGTTCAATTCAACGGGAATAATTTGGATGGGTTTGGGATTTTGGGAGGTGGGTCGTCAAGTTTGAATTCCGGCGCTGGAACTTGCCATGACTGTGGGAACCAAGCGAAGAAAGATTGCAGCCACCGGCGGTGCCGGAGCTGCTGTAAAAGTCGTGGATTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTTCCGGCAGCTCGGCGAAGAGAACGTCAGATGCTGGGCGGCGTGTCAGAAGCGGCCGCCGCAGCCGGCGGCGGGACTTCATCTGGGTCAACCTCCGGCGGGAAGAAGCCGAGACTCATTGCTTCACAGACGACTACCAATTCCCATACTTCCACTTCCAACACTCCAACACCAAGCTTCGACGCTTCCTCAGGTCAAATCCCTCTCAGTTTTTTTCTTTTTTTTTTTTTTTTTAAAAAAATTAAATTTACTATTTTATTTTTTCAAAAAAAAAAAAAAAAAGAAAATGTATTTTAAGGTGCACCGATCTTTTTGTTCTTCCTCCCACCACATAATTGAAAATTTTTAAAAATATTTTAAGAAAAAGAGAAAAGAAGTATTTGTCACATAATTAAAGTGGATAAGTTGCAAATGAACAAAACTCATACTTGTTTTTTTTTAATTTTTCTAATTTTATATATATACACAGACATATATACACACTTTGATTTTTGATTTTTAATTCTCCATTTAACAATAATTTTTGGTTTCTGATTTTTGAAAGTTGGAGTTTTTGTAATTTCTTTTTGTTCATATTTCTTAAAAAACTCATCTACGAAGCTAAATTGTCTGAAAAAAAAACTAATTCTTTAGTTTCCAAAAGTTTGTTCAAATTTTCTATAAAATGGACAATAAAATATGAAAATTCAGTGTTTATAAGTTTAAGATTTAAATAGTAATTATCAAATGAAGTCTAAATTTTAAATGATTGATTTATATTCGACTTTGATCTTACAAAAACAAAAAAGAAAAAAAAAAGGATGCACACTCATATTTTGGTACTTTATCATTTTTTTCAACAAATGAATGACATATTTTGAATGTTTAAAGATTTGCCAAAGTGAAGCATGTGATGAGTATTGTGATGAGTATTATTAAGAGGGAAAATAATTATAACACAAAAACAATCTAATTAGTTATTTTTCAAAATTTAAAATCTAAAACCACACACACATATATATATATATATATATATATATAAGGAAAAGAAATGAGTTTTTACTTTATTTTATTTTTTATTTTAATATTGCTTGAATTAGATCTATGAACTTTTAAGGTTTCGTGTAATAATAAGCCTTCCAATTTTAAAAATTCTACTAAATTTTTAGATTTGATGTTTAATAAAATTTTAAATATATTTTAAAACATAGTCAAAATTAATAATAATAATAAAAATAAAACCTAAACATTCATAAAATTTGGTGACTTTATTACACAAAATAATAAAGAAGATTTTAGACAACCAAACTTATAATGAAATCTTGATTCTTTGAATTTATCCCAAAGAATGTGATGGAACTTTTTTGAGTTGTTTTGTGTTAACTTTAAGCAACACAGTGCAGCCGCCGATATGAGTTCTAAAAAGGCAAAGAAGCTGCCGGAACAAATCAGAGCGCCTGCGGTGTTCAAGTGCGTCCGGGTGACGGCGGTGGAAGGCGGCAGCGGCGGAGGAGGGAATGAATATGCTTATCAAGCCGTCGTGAAGATCGGCGGCCATATTTTTAAAGGTTATTTATACGACCATGGAGTAGAAGCTGCCAGAGATGGGTTTCCAACGTTGTCCAATTTGCATCTTGGAGATGGCGGTTCGGCATCGTCGCCGGTCATTGATCCTGCTGACGTTTATGGAAGCTCCGCCGCTCGCGGCGGGGGACTGGCTGGGGGTTCTGGCTATGGTAATCCCATAAATTGA

mRNA sequence

ATGCACAAGAAAAGGAAAATTAATTTAGGGTTTTTCTTCTTCTTCGCCGGAGATTTACCAGCTGTGGCTGCCGCACGCCGTCTTCCATCCGATTCCGGTGCCTTTGCCGACTGGGTGGCTCCTCCCTCTGCCATAGTCGCCGATGAACTCTCCCTCGGTTTCAGTTCCGGCGCCACAGTTCCACCGGCCAGGATGTGGCCCTCGTCCAGACCACTTGCCGTCGGTTACGGCCACACCGCGGCGCCAGCGCCAGACATGGTGGGTCTCATGGCTTCGGGCTTTGGAGTCGGCGTTAGCGTTTTGCCTCTCCTTACCGGCCTTGCGCCATCGAGTGTAGGAATTGAAGAGGCTAATTTAATGATCAGCCGTGGCAGCAGCAGCAGTGGGGTTCAATTCAACGGGAATAATTTGGATGGGTTTGGGATTTTGGGAGGTGGGTCGTCAAGTTTGAATTCCGGCGCTGGAACTTGCCATGACTGTGGGAACCAAGCGAAGAAAGATTGCAGCCACCGGCGGTGCCGGAGCTGCTGTAAAAGTCGTGGATTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTTCCGGCAGCTCGGCGAAGAGAACGTCAGATGCTGGGCGGCGTGTCAGAAGCGGCCGCCGCAGCCGGCGGCGGGACTTCATCTGGGTCAACCTCCGGCGGGAAGAAGCCGAGACTCATTGCTTCACAGACGACTACCAATTCCCATACTTCCACTTCCAACACTCCAACACCAAGCTTCGACGCTTCCTCAGCCGCCGATATGAGTTCTAAAAAGGCAAAGAAGCTGCCGGAACAAATCAGAGCGCCTGCGGTGTTCAAGTGCGTCCGGGTGACGGCGGTGGAAGGCGGCAGCGGCGGAGGAGGGAATGAATATGCTTATCAAGCCGTCGTGAAGATCGGCGGCCATATTTTTAAAGGTTATTTATACGACCATGGAGTAGAAGCTGCCAGAGATGGGTTTCCAACGTTGTCCAATTTGCATCTTGGAGATGGCGGTTCGGCATCGTCGCCGGTCATTGATCCTGCTGACGTTTATGGAAGCTCCGCCGCTCGCGGCGGGGGACTGGCTGGGGGTTCTGGCTATGGTAATCCCATAAATTGA

Coding sequence (CDS)

ATGCACAAGAAAAGGAAAATTAATTTAGGGTTTTTCTTCTTCTTCGCCGGAGATTTACCAGCTGTGGCTGCCGCACGCCGTCTTCCATCCGATTCCGGTGCCTTTGCCGACTGGGTGGCTCCTCCCTCTGCCATAGTCGCCGATGAACTCTCCCTCGGTTTCAGTTCCGGCGCCACAGTTCCACCGGCCAGGATGTGGCCCTCGTCCAGACCACTTGCCGTCGGTTACGGCCACACCGCGGCGCCAGCGCCAGACATGGTGGGTCTCATGGCTTCGGGCTTTGGAGTCGGCGTTAGCGTTTTGCCTCTCCTTACCGGCCTTGCGCCATCGAGTGTAGGAATTGAAGAGGCTAATTTAATGATCAGCCGTGGCAGCAGCAGCAGTGGGGTTCAATTCAACGGGAATAATTTGGATGGGTTTGGGATTTTGGGAGGTGGGTCGTCAAGTTTGAATTCCGGCGCTGGAACTTGCCATGACTGTGGGAACCAAGCGAAGAAAGATTGCAGCCACCGGCGGTGCCGGAGCTGCTGTAAAAGTCGTGGATTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTTCCGGCAGCTCGGCGAAGAGAACGTCAGATGCTGGGCGGCGTGTCAGAAGCGGCCGCCGCAGCCGGCGGCGGGACTTCATCTGGGTCAACCTCCGGCGGGAAGAAGCCGAGACTCATTGCTTCACAGACGACTACCAATTCCCATACTTCCACTTCCAACACTCCAACACCAAGCTTCGACGCTTCCTCAGCCGCCGATATGAGTTCTAAAAAGGCAAAGAAGCTGCCGGAACAAATCAGAGCGCCTGCGGTGTTCAAGTGCGTCCGGGTGACGGCGGTGGAAGGCGGCAGCGGCGGAGGAGGGAATGAATATGCTTATCAAGCCGTCGTGAAGATCGGCGGCCATATTTTTAAAGGTTATTTATACGACCATGGAGTAGAAGCTGCCAGAGATGGGTTTCCAACGTTGTCCAATTTGCATCTTGGAGATGGCGGTTCGGCATCGTCGCCGGTCATTGATCCTGCTGACGTTTATGGAAGCTCCGCCGCTCGCGGCGGGGGACTGGCTGGGGGTTCTGGCTATGGTAATCCCATAAATTGA

Protein sequence

MHKKRKINLGFFFFFAGDLPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFSSGATVPPARMWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGGLAGGSGYGNPIN

Homology

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BLAST of CcUC03G053850 vs. NCBI nr
Match: KAA0056003.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK27692.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 611.3 bits (1575), Expect = 5.5e-171
Identity = 324/367 (88.28%), Postives = 335/367 (91.28%), Query Frame = 0


Query: 10  GFFFFFAGDLPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFSSGATVPPARMWPSS 69
           GF F  A D PAVAAARRLPSDSGAFADWVAPPSAIVADELSLGF+S +++P  RMWPSS
Sbjct: 7   GFLFLSARDSPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSASSIPSPRMWPSS 66

Query: 70  RPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG----S 129
           RPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG     
Sbjct: 67  RPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDE 126

Query: 130 SSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 189
              G+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS
Sbjct: 127 GGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 186

Query: 190 THVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNSHTSTS 249
           THVKSTWVPAARRRERQM+G  S+AAA   GGTSSGSTSGGKKPRLIASQTTTNSHTSTS
Sbjct: 187 THVKSTWVPAARRRERQMMGAASDAAA---GGTSSGSTSGGKKPRLIASQTTTNSHTSTS 246

Query: 250 NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKI 309
           NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYAYQAVVKI
Sbjct: 247 NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKI 306

Query: 310 GGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGGLAGGS 369
           GGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RGGGLAGGS
Sbjct: 307 GGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS 366

Query: 370 GYGNPIN 373
           GYGN IN
Sbjct: 367 GYGNSIN 368

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BLAST of CcUC03G053850 vs. NCBI nr
Match: KAG6588219.1 (Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 540.0 bits (1390), Expect = 1.6e-149
Identity = 299/365 (81.92%), Postives = 317/365 (86.85%), Query Frame = 0


Query: 21  AVAAARRLPSDSGAFADWVAPPSAIVADELSLGFSSGATVPPARMWPSS---RPLAVGYG 80
           +VAAARRLPSDSGAFADWVAPP+A   DELSLGF+S A VP ARMWPSS   RP+A  YG
Sbjct: 12  SVAAARRLPSDSGAFADWVAPPTA--DDELSLGFNSAAAVPVARMWPSSSSTRPIAGAYG 71

Query: 81  HTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISR-------GSSSSGV 140
           HTA P  DMVGLMASG+GVG+SVLPLLTGLAPSSVGIEE NLMISR       G    GV
Sbjct: 72  HTAPPPTDMVGLMASGYGVGLSVLPLLTGLAPSSVGIEETNLMISRGGGGGDGGGGGGGV 131

Query: 141 QFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKS 200
           QF+GNN DGFG LGGG SSLNSG GTCHDCGNQAKKDC+HRRCRSCCKSRGFDC+THVKS
Sbjct: 132 QFHGNNFDGFGFLGGG-SSLNSGVGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCATHVKS 191

Query: 201 TWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTP 260
           TWVPAARRRERQ+L   + AAAAA GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPT 
Sbjct: 192 TWVPAARRRERQVLSAAA-AAAAATGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTR 251

Query: 261 SFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIF 320
           SFD  SAADMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG G GGNEYAYQAVVKIGGH+F
Sbjct: 252 SFDTCSAADMSYKRAKKLPEQVRAPAVFKCVRVTAVEGG-GSGGNEYAYQAVVKIGGHVF 311

Query: 321 KGYLYDHGVEAARDGFPTLSNLHL---GDGGSASSPVIDPADVYGSSAARGGGLAGGSGY 373
           KGYLYDHGVE AR+GFP LS+LHL   GDGGS SSP+IDP+DVYGSSA RGGGLAGGSGY
Sbjct: 312 KGYLYDHGVE-AREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSSAGRGGGLAGGSGY 370

[Close]

BLAST of CcUC03G053850 vs. NCBI nr
Match: XP_038878596.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 532.7 bits (1371), Expect = 2.5e-147
Identity = 286/313 (91.37%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 65  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISR- 124
           MWPSSRPLA+GYGHTAAP  DMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISR 
Sbjct: 1   MWPSSRPLAIGYGHTAAPPTDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 60

Query: 125 ----GSSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKS 184
               G    GVQFNGNNLDGFGILGGG SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKS
Sbjct: 61  GGDGGGGGGGVQFNGNNLDGFGILGGG-SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKS 120

Query: 185 RGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTN 244
           RGFDCSTHVKSTWVPAARRRERQML   S+ AA   GGTSSGSTSGGKKPRLIASQTTTN
Sbjct: 121 RGFDCSTHVKSTWVPAARRRERQMLSAASDVAA---GGTSSGSTSGGKKPRLIASQTTTN 180

Query: 245 SHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAY 304
           SHTSTSNTPTPSFDASSAADMS KKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYAY
Sbjct: 181 SHTSTSNTPTPSFDASSAADMSCKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAY 240

Query: 305 QAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGG 364
           QA+VKIGGHIFKGYLYDHGVE ARDGFPTLSNLHLGDGGS SSPVIDPADVYGSSAARGG
Sbjct: 241 QAIVKIGGHIFKGYLYDHGVE-ARDGFPTLSNLHLGDGGSTSSPVIDPADVYGSSAARGG 300

Query: 365 GLAGGSGYGNPIN 373
            LAGGSGYGNPIN
Sbjct: 301 ALAGGSGYGNPIN 308

[Close]

BLAST of CcUC03G053850 vs. NCBI nr
Match: XP_008450344.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 2.1e-146
Identity = 281/312 (90.06%), Postives = 288/312 (92.31%), Query Frame = 0


Query: 65  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 124
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 60

Query: 125 ----SSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 184
                   G+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDEGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 185 GFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNS 244
           GFDCSTHVKSTWVPAARRRERQM+G  S+AAA   GGTSSGSTSGGKKPRLIASQTTTNS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAA---GGTSSGSTSGGKKPRLIASQTTTNS 180

Query: 245 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQ 304
           HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYAYQ
Sbjct: 181 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQ 240

Query: 305 AVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGG 364
           AVVKIGGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RGGG
Sbjct: 241 AVVKIGGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGG 300

Query: 365 LAGGSGYGNPIN 373
           LAGGSGYGN IN
Sbjct: 301 LAGGSGYGNSIN 307

[Close]

BLAST of CcUC03G053850 vs. NCBI nr
Match: XP_011660164.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN66542.1 hypothetical protein Csa_007512 [Cucumis sativus])

HSP 1 Score: 524.2 bits (1349), Expect = 8.9e-145
Identity = 278/312 (89.10%), Postives = 286/312 (91.67%), Query Frame = 0


Query: 65  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 124
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLL+GLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLSGLAPSSVGIEEANLMISRG 60

Query: 125 ----SSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 184
                   G+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDDGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 185 GFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNS 244
           GFDCSTHVKSTWVPAARRRERQM+G  S+AAA   GGTSSGSTSGGKKPRLIASQTTTNS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAA---GGTSSGSTSGGKKPRLIASQTTTNS 180

Query: 245 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQ 304
           HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGG+ GGGNEYAYQ
Sbjct: 181 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGTSGGGNEYAYQ 240

Query: 305 AVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGG 364
           AVVKIGGH+FKGYLYDHGVE ARDGFP +SNLHLGDGGS SSPVIDPADVYGSS  RGGG
Sbjct: 241 AVVKIGGHVFKGYLYDHGVE-ARDGFPMMSNLHLGDGGSTSSPVIDPADVYGSSTTRGGG 300

Query: 365 LAGGSGYGNPIN 373
           LAGGSGYGN IN
Sbjct: 301 LAGGSGYGNSIN 307

[Close]

BLAST of CcUC03G053850 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.4e-55
Identity = 146/295 (49.49%), Postives = 182/295 (61.69%), Query Frame = 0


Query: 91  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSSGVQFNGNNLD------------ 150
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 35  AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 94

Query: 151 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 210
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 95  TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 154

Query: 211 RRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSF 270
           RRRERQ    V    A    G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF
Sbjct: 155 RRRERQ----VMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSF 214

Query: 271 DASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKG 330
           + SS+        +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+FKG
Sbjct: 215 ETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVFKG 274

Query: 331 YLYDHGVEAARDGFPTLSNLHLG------DGGSASSPVIDPAD-VYGSSAARGGG 361
           +LYD G+E  ++GFP++S+LHLG      +G SAS+P++DP + VYG     GGG
Sbjct: 275 FLYDQGLE-PKEGFPSMSDLHLGGSANNHNGVSASAPILDPPNVVYGGGGGSGGG 317

[Close]

BLAST of CcUC03G053850 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-30
Identity = 93/216 (43.06%), Postives = 122/216 (56.48%), Query Frame = 0


Query: 156 TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAG 215
           +C DCGNQAKKDC+H RCR+CCKSRGFDCSTHV+STW+P ARRRERQ    +  + +  G
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQ--QLHMSTSGGG 152

Query: 216 GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAP 275
           GG+ SG   GG        +  T   TS+S+   PS  A      +S      P ++ + 
Sbjct: 153 GGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSR-LPSHSAGLEMGEAS-----FPGEVSSD 212

Query: 276 AVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLG 335
           A+F+CV+++ V+    GG  +YAYQ  V IGGH+FKG LYD G        P  S +  G
Sbjct: 213 ALFRCVKMSGVD---DGGDGQYAYQTTVNIGGHLFKGILYDQG--------PESSYMSGG 272

Query: 336 DGGSASSPVIDPADVYGSSAARGGGLAGGSGYGNPI 372
            GGS           + SS+A GGG  GG  +  P+
Sbjct: 273 SGGSD----------HQSSSAGGGG--GGHPFNPPV 277

[Close]

BLAST of CcUC03G053850 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.1e-28
Identity = 85/226 (37.61%), Postives = 122/226 (53.98%), Query Frame = 0


Query: 125 SSSSGVQFNGNNLDGFGILGGGSSSLNSGAG----TCHDCGNQAKKDCSHRRCRSCCKSR 184
           +S++G+    +N       GG    + SG+G    +C DCGNQ+KKDCSH RCR+CCKSR
Sbjct: 84  TSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSR 143

Query: 185 GFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNS 244
           G DC THVKSTWVPAA+RRERQ      +     GG          ++   I +++T+ +
Sbjct: 144 GLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPK------RQRERIPARSTSMA 203

Query: 245 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQ 304
           +T   +  T   +  +            P ++ + AVF+CVRV++V+        EYAY+
Sbjct: 204 YTRIPSNNTSGLEVGN-----------FPPEVSSSAVFRCVRVSSVDDEE----EEYAYK 263

Query: 305 AVVKIGGHIFKGYLYDHGV---EAARDGFPTLSNLHLGDGGSASSP 344
             V IGGH+FKG LYD G     ++  G   L+ +  G   S+SSP
Sbjct: 264 TAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSP 288

[Close]

BLAST of CcUC03G053850 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 7.1e-28
Identity = 88/215 (40.93%), Postives = 120/215 (55.81%), Query Frame = 0


Query: 120 MISRGSSSSGVQFNGNNLDG---FGILG----GGSSSLNSGAGTCHDCGNQAKKDCSHRR 179
           M+  GSSS+    N NN      F ++     GG +    G   C DCGNQAKKDC H R
Sbjct: 85  MVPSGSSSN----NNNNRSRSLYFNVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMR 144

Query: 180 CRSCCKSRGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLI 239
           CR+CCKSRGF C THVKSTWVPAA+RRER     +++ A+      SS  T   K+ R  
Sbjct: 145 CRTCCKSRGFHCQTHVKSTWVPAAKRRER-----LAQLASLQHHSASSRETQNAKRLREA 204

Query: 240 ASQTTTNSH-------TSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTA 299
           +     +         ++ +NT   + +++S  ++S    + LP ++ +PA+F+CVRV++
Sbjct: 205 SGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVS----QHLPPEVNSPAIFRCVRVSS 264

Query: 300 VEGGSGGGGNEYAYQAVVKIGGHIFKGYLYDHGVE 321
           +E         YAYQ  V IGGHIFKG LYD G E
Sbjct: 265 IE--EDEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of CcUC03G053850 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 7.8e-27
Identity = 104/318 (32.70%), Postives = 142/318 (44.65%), Query Frame = 0


Query: 55  SSGATVPPARMWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVS---VLPLLTGLAPSS 114
           SS A +    +W +     + + H        +   A+G GVG S      +    + + 
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 115 VGIEEANLMISRGSSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHR 174
            G   A +MI  G S                 GGG     SG  +C DCGNQAKKDCSH 
Sbjct: 121 AGRAAAMMMIRSGGS-----------------GGG-----SGGVSCQDCGNQAKKDCSHM 180

Query: 175 RCRSCCKSRGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRL 234
           RCR+CCKSRGF+CSTHV+STWVPAA+RRERQ      +                  + +L
Sbjct: 181 RCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQ-----------------PQTQL 240

Query: 235 IASQTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSG 294
              ++    H       + S   +     S  +    P ++ + AVF+CVRV++VE G  
Sbjct: 241 PRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGE- 300

Query: 295 GGGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDG---FPTLSNLHLGDGGSASSPVIDPA 354
               E+AYQ  V IGGHIFKG LYD G  ++  G            G GG+    +I   
Sbjct: 301 ---EEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGGAQQLNLITAG 335

Query: 355 DVYGSSAARGGGLAGGSG 367
            V  ++A+      GG G
Sbjct: 361 SVTVATASSSTPNLGGIG 335

[Close]

BLAST of CcUC03G053850 vs. ExPASy TrEMBL
Match: A0A5A7UJ85 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00230 PE=3 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.7e-171
Identity = 324/367 (88.28%), Postives = 335/367 (91.28%), Query Frame = 0


Query: 10  GFFFFFAGDLPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFSSGATVPPARMWPSS 69
           GF F  A D PAVAAARRLPSDSGAFADWVAPPSAIVADELSLGF+S +++P  RMWPSS
Sbjct: 7   GFLFLSARDSPAVAAARRLPSDSGAFADWVAPPSAIVADELSLGFNSASSIPSPRMWPSS 66

Query: 70  RPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG----S 129
           RPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG     
Sbjct: 67  RPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDE 126

Query: 130 SSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 189
              G+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS
Sbjct: 127 GGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCS 186

Query: 190 THVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNSHTSTS 249
           THVKSTWVPAARRRERQM+G  S+AAA   GGTSSGSTSGGKKPRLIASQTTTNSHTSTS
Sbjct: 187 THVKSTWVPAARRRERQMMGAASDAAA---GGTSSGSTSGGKKPRLIASQTTTNSHTSTS 246

Query: 250 NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKI 309
           NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYAYQAVVKI
Sbjct: 247 NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKI 306

Query: 310 GGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGGLAGGS 369
           GGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RGGGLAGGS
Sbjct: 307 GGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS 366

Query: 370 GYGNPIN 373
           GYGN IN
Sbjct: 367 GYGNSIN 368

[Close]

BLAST of CcUC03G053850 vs. ExPASy TrEMBL
Match: A0A1S3BQ17 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103491981 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 1.0e-146
Identity = 281/312 (90.06%), Postives = 288/312 (92.31%), Query Frame = 0


Query: 65  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 124
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 60

Query: 125 ----SSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 184
                   G+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDEGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 185 GFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNS 244
           GFDCSTHVKSTWVPAARRRERQM+G  S+AAA   GGTSSGSTSGGKKPRLIASQTTTNS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAA---GGTSSGSTSGGKKPRLIASQTTTNS 180

Query: 245 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQ 304
           HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGS GGGNEYAYQ
Sbjct: 181 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQ 240

Query: 305 AVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGG 364
           AVVKIGGH+FKGYLYDHGVE ARDGFPT+SNLHLGDGGS SSPVIDP+DVYGSSA RGGG
Sbjct: 241 AVVKIGGHVFKGYLYDHGVE-ARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGG 300

Query: 365 LAGGSGYGNPIN 373
           LAGGSGYGN IN
Sbjct: 301 LAGGSGYGNSIN 307

[Close]

BLAST of CcUC03G053850 vs. ExPASy TrEMBL
Match: A0A0A0M099 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G628000 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 4.3e-145
Identity = 278/312 (89.10%), Postives = 286/312 (91.67%), Query Frame = 0


Query: 65  MWPSSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRG 124
           MWPSSRPL +GY HT AP PDMVGLMASGFGVGVSVLPLL+GLAPSSVGIEEANLMISRG
Sbjct: 1   MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLSGLAPSSVGIEEANLMISRG 60

Query: 125 ----SSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSR 184
                   G+QFNGNNLDGFGILGGG SSLNSG GTCHDCGNQAKKDCSHRRCRSCCKSR
Sbjct: 61  GGGDDGGGGIQFNGNNLDGFGILGGG-SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSR 120

Query: 185 GFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNS 244
           GFDCSTHVKSTWVPAARRRERQM+G  S+AAA   GGTSSGSTSGGKKPRLIASQTTTNS
Sbjct: 121 GFDCSTHVKSTWVPAARRRERQMMGAASDAAA---GGTSSGSTSGGKKPRLIASQTTTNS 180

Query: 245 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQ 304
           HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGG+ GGGNEYAYQ
Sbjct: 181 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGTSGGGNEYAYQ 240

Query: 305 AVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLGDGGSASSPVIDPADVYGSSAARGGG 364
           AVVKIGGH+FKGYLYDHGVE ARDGFP +SNLHLGDGGS SSPVIDPADVYGSS  RGGG
Sbjct: 241 AVVKIGGHVFKGYLYDHGVE-ARDGFPMMSNLHLGDGGSTSSPVIDPADVYGSSTTRGGG 300

Query: 365 LAGGSGYGNPIN 373
           LAGGSGYGN IN
Sbjct: 301 LAGGSGYGNSIN 307

[Close]

BLAST of CcUC03G053850 vs. ExPASy TrEMBL
Match: A0A6J1ID91 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472747 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.7e-131
Identity = 263/320 (82.19%), Postives = 279/320 (87.19%), Query Frame = 0


Query: 65  MWP---SSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMI 124
           MWP   SSRP+A  YGHTA P  DMVGLMASG+GVG+SVLPLLTG+APSSVGIEE NLMI
Sbjct: 1   MWPSSSSSRPIAGAYGHTAPPPTDMVGLMASGYGVGLSVLPLLTGIAPSSVGIEETNLMI 60

Query: 125 SR------GSSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRS 184
           SR      G    GVQF+GNN DGFG LGGG SSLNSG GTCHDCGNQAKKDC+HRRCRS
Sbjct: 61  SRGGGGDGGGGGGGVQFHGNNFDGFGFLGGG-SSLNSGVGTCHDCGNQAKKDCNHRRCRS 120

Query: 185 CCKSRGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQ 244
           CCKSRGFDC+THVKSTWVPAARRRERQ+L   + AAAAA GGTSSGSTSGGKKPRLIASQ
Sbjct: 121 CCKSRGFDCATHVKSTWVPAARRRERQVLS--AAAAAAATGGTSSGSTSGGKKPRLIASQ 180

Query: 245 TTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGN 304
           TTTNSHTSTSNTPT SFD  SAADMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG G GGN
Sbjct: 181 TTTNSHTSTSNTPTRSFDTCSAADMSYKRAKKLPEQVRAPAVFKCVRVTAVEGG-GSGGN 240

Query: 305 EYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHL---GDGGSASSPVIDPADVYG 364
           EYAYQAVVKIGGH+FKGYLYDHGVE AR+GFP LS+LHL   GDGGS SSP+IDP+DVYG
Sbjct: 241 EYAYQAVVKIGGHVFKGYLYDHGVE-AREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYG 300

Query: 365 SSAARGGGLAGGSGYGNPIN 373
           SSA RGGGLAGGSGYGNPIN
Sbjct: 301 SSAGRGGGLAGGSGYGNPIN 315

[Close]

BLAST of CcUC03G053850 vs. ExPASy TrEMBL
Match: A0A6J1F4X3 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440862 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.8e-130
Identity = 262/318 (82.39%), Postives = 278/318 (87.42%), Query Frame = 0


Query: 65  MWP---SSRPLAVGYGHTAAPAPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMI 124
           MWP   S+RP+A  YGHTA P  DMVGLMASG+GVG+SVLPLLTGLAPSSVGIEE NLMI
Sbjct: 1   MWPSTSSTRPIAGAYGHTAPPPTDMVGLMASGYGVGLSVLPLLTGLAPSSVGIEETNLMI 60

Query: 125 SR----GSSSSGVQFNGNNLDGFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCC 184
           SR    G    GVQF+GNN DGFG LGGG SSLNSG GTCHDCGNQAKKDC+HRRCRSCC
Sbjct: 61  SRGGDGGGGGGGVQFHGNNFDGFGFLGGG-SSLNSGVGTCHDCGNQAKKDCNHRRCRSCC 120

Query: 185 KSRGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTT 244
           KSRGFDC+THVKSTWVPAARRRERQ+L   + AAAAA GGTSSGSTSGGKKPRLIASQTT
Sbjct: 121 KSRGFDCATHVKSTWVPAARRRERQVLS--AAAAAAATGGTSSGSTSGGKKPRLIASQTT 180

Query: 245 TNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEY 304
           TNSHTSTSNTPT SFD  SAADMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG G GGNEY
Sbjct: 181 TNSHTSTSNTPTRSFDTCSAADMSYKRAKKLPEQVRAPAVFKCVRVTAVEGG-GTGGNEY 240

Query: 305 AYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHL---GDGGSASSPVIDPADVYGSS 364
           AYQAVVKIGGH+FKGYLYDHGVE AR+GFP LS+LHL   GDGGS SSP+IDP+DVYGSS
Sbjct: 241 AYQAVVKIGGHVFKGYLYDHGVE-AREGFPMLSDLHLGGGGDGGSTSSPIIDPSDVYGSS 300

Query: 365 AARGGGLAGGSGYGNPIN 373
           A RGGGLAG SGYGNPIN
Sbjct: 301 AGRGGGLAGSSGYGNPIN 313

[Close]

BLAST of CcUC03G053850 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 235.7 bits (600), Expect = 5.9e-62
Identity = 179/415 (43.13%), Postives = 228/415 (54.94%), Query Frame = 0


Query: 15  FAGDLPAVAAARR--LP-SDSGAFADWVAPPS--AIVADELSLGFSSGATVPPARM---- 74
           + G L +VA  RR  LP SDSGAF DW A  +  +   ++LSLGF++G++V    +    
Sbjct: 2   YIGALCSVATTRRHNLPTSDSGAFTDWAATTTTPSRATEDLSLGFNAGSSVIHGGLGSAS 61

Query: 75  -------WPSSRPLAVGYGHTAAPAP-DMVGL---------------------------M 134
                  WP    +  G   +AA     MVGL                            
Sbjct: 62  VAAGVPSWPPGSSVRYGLPSSAAATEMGMVGLRDVFLVAPAYHHQNAGVISGSDHMNSNA 121

Query: 135 ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSSGVQFNGNNLD------------ 194
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 122 AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 181

Query: 195 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 254
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 182 TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 241

Query: 255 RRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSF 314
           RRRERQ    V    A    G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF
Sbjct: 242 RRRERQ----VMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSF 301

Query: 315 DASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKG 361
           + SS+        +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+FKG
Sbjct: 302 ETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVFKG 361

[Close]

BLAST of CcUC03G053850 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 218.4 bits (555), Expect = 9.7e-57
Identity = 146/295 (49.49%), Postives = 182/295 (61.69%), Query Frame = 0


Query: 91  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSSGVQFNGNNLD------------ 150
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 35  AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 94

Query: 151 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 210
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 95  TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 154

Query: 211 RRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSF 270
           RRRERQ    V    A    G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF
Sbjct: 155 RRRERQ----VMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSF 214

Query: 271 DASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKG 330
           + SS+        +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+FKG
Sbjct: 215 ETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVFKG 274

Query: 331 YLYDHGVEAARDGFPTLSNLHLG------DGGSASSPVIDPAD-VYGSSAARGGG 361
           +LYD G+E  ++GFP++S+LHLG      +G SAS+P++DP + VYG     GGG
Sbjct: 275 FLYDQGLE-PKEGFPSMSDLHLGGSANNHNGVSASAPILDPPNVVYGGGGGSGGG 317

[Close]

BLAST of CcUC03G053850 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 218.4 bits (555), Expect = 9.7e-57
Identity = 146/295 (49.49%), Postives = 182/295 (61.69%), Query Frame = 0


Query: 91  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGSSSSGVQFNGNNLD------------ 150
           A+   +GV V+PLLT   P    +E+++  I+   ++   Q N NN +            
Sbjct: 35  AAAAALGVGVIPLLTAGTPQQ-NVEDSD--INFLGNNRRWQNNNNNHETQYLHFKSTNQT 94

Query: 151 --GFGILGGGSSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAA 210
             G      GS S  SG  TC DCGNQAKK+C  RRCR+CCKSRGFDCSTHVKSTWV AA
Sbjct: 95  TVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAA 154

Query: 211 RRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSF 270
           RRRERQ    V    A    G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF
Sbjct: 155 RRRERQ----VMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSF 214

Query: 271 DASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKG 330
           + SS+        +  P Q+RA AVFKCVRVTAVE G     +EYAYQAVVKIGGH+FKG
Sbjct: 215 ETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGD----DEYAYQAVVKIGGHVFKG 274

Query: 331 YLYDHGVEAARDGFPTLSNLHLG------DGGSASSPVIDPAD-VYGSSAARGGG 361
           +LYD G+E  ++GFP++S+LHLG      +G SAS+P++DP + VYG     GGG
Sbjct: 275 FLYDQGLE-PKEGFPSMSDLHLGGSANNHNGVSASAPILDPPNVVYGGGGGSGGG 317

[Close]

BLAST of CcUC03G053850 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-31
Identity = 93/216 (43.06%), Postives = 122/216 (56.48%), Query Frame = 0


Query: 156 TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAG 215
           +C DCGNQAKKDC+H RCR+CCKSRGFDCSTHV+STW+P ARRRERQ    +  + +  G
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQ--QLHMSTSGGG 152

Query: 216 GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAP 275
           GG+ SG   GG        +  T   TS+S+   PS  A      +S      P ++ + 
Sbjct: 153 GGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSR-LPSHSAGLEMGEAS-----FPGEVSSD 212

Query: 276 AVFKCVRVTAVEGGSGGGGNEYAYQAVVKIGGHIFKGYLYDHGVEAARDGFPTLSNLHLG 335
           A+F+CV+++ V+    GG  +YAYQ  V IGGH+FKG LYD G        P  S +  G
Sbjct: 213 ALFRCVKMSGVD---DGGDGQYAYQTTVNIGGHLFKGILYDQG--------PESSYMSGG 272

Query: 336 DGGSASSPVIDPADVYGSSAARGGGLAGGSGYGNPI 372
            GGS           + SS+A GGG  GG  +  P+
Sbjct: 273 SGGSD----------HQSSSAGGGG--GGHPFNPPV 277

[Close]

BLAST of CcUC03G053850 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 129.0 bits (323), Expect = 7.8e-30
Identity = 85/226 (37.61%), Postives = 122/226 (53.98%), Query Frame = 0


Query: 125 SSSSGVQFNGNNLDGFGILGGGSSSLNSGAG----TCHDCGNQAKKDCSHRRCRSCCKSR 184
           +S++G+    +N       GG    + SG+G    +C DCGNQ+KKDCSH RCR+CCKSR
Sbjct: 84  TSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSR 143

Query: 185 GFDCSTHVKSTWVPAARRRERQMLGGVSEAAAAAGGGTSSGSTSGGKKPRLIASQTTTNS 244
           G DC THVKSTWVPAA+RRERQ      +     GG          ++   I +++T+ +
Sbjct: 144 GLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPK------RQRERIPARSTSMA 203

Query: 245 HTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSGGGGNEYAYQ 304
           +T   +  T   +  +            P ++ + AVF+CVRV++V+        EYAY+
Sbjct: 204 YTRIPSNNTSGLEVGN-----------FPPEVSSSAVFRCVRVSSVDDEE----EEYAYK 263

Query: 305 AVVKIGGHIFKGYLYDHGV---EAARDGFPTLSNLHLGDGGSASSP 344
             V IGGH+FKG LYD G     ++  G   L+ +  G   S+SSP
Sbjct: 264 TAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSP 288

The following BLAST results are available for this feature:

BLAST of CcUC03G053850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056003.1	5.5e-171	88.28	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK27692.1 protein...	[more]
KAG6588219.1	1.6e-149	81.92	Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038878596.1	2.5e-147	91.37	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
XP_008450344.1	2.1e-146	90.06	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
XP_011660164.1	8.9e-145	89.10	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN66542.1 hypothetical pro...	[more]

BLAST of CcUC03G053850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	1.4e-55	49.49	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
O65517	1.5e-30	43.06	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9XGX0	1.1e-28	37.61	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9LQZ5	7.1e-28	40.93	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9SD40	7.8e-27	32.70	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]

BLAST of CcUC03G053850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJ85	2.7e-171	88.28	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BQ17	1.0e-146	90.06	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103491981 PE=3 S...	[more]
A0A0A0M099	4.3e-145	89.10	Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G628000 PE=3 SV=1	[more]
A0A6J1ID91	2.7e-131	82.19	protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1F4X3	1.8e-130	82.39	protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of CcUC03G053850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.4	5.9e-62	43.13	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.2	9.7e-57	49.49	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	9.7e-57	49.49	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	1.1e-31	43.06	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	7.8e-30	37.61	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 156..320 e-value: 5.8E-57 score: 192.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..268
None	No IPR available	PANTHER	PTHR31604:SF30	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 129..372
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 268..319 e-value: 5.6E-24 score: 81.8
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 156..198 e-value: 2.5E-25 score: 86.1
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 129..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G053850.1	CcUC03G053850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding