CcUC03G052890 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G052890
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr03: 19804301 .. 19810309 (-)
RNA-Seq ExpressionCcUC03G052890
SyntenyCcUC03G052890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAACATAGGCTTGGAACTGAGCAGAAGAGCGCCCAAAAATAAATTGCAAGACCGCAAAGACAAAGAGCATGTGATCAGAAACAAAAAAGAAGGTAATGGAAAGCTTTGTAACGTGGGTCAAGCAGAGGCATTAAAATGCAACAAGTTCCAAATATCAACTCGCGAAATGGAGGAAACAAGGCCACTTTGTCCATCATACCACAATAAAGGAGACACCAGCCCAAAAGAATTAAACGCCACCTCAAAGTGGATGGTACATAACAAGAAATTTATGAGCAGGAGCAACATACCTATCATAAGATTCAGCCCTTGTATATGCTTGGATCACCCAATTATATGTCTCAGTATCAGGTTTCATGTAATCTGTCATATGATAAAGGTGTAAAGCATCAAAACTTCAACCATGGAGAATATGAGCAGAGCTCAGTTACAAACTGCACATAAAAGCAAAACCAGCTGAAACAAGACCATATTTATTGAATGTTTCATTCTTCATATAGATATACCAAAATACTGTTACTAGACAAATAAACCAAAACAGACGGTAATTATAGAAACCCTCTAGAAGGATTTGTACTGTTGAGTTGAGTTTGTTTTTTTTTGCTTTTTCTTTTGTGTCTTGAGCATAATGAGACATTATGAATGGATGAAAATCAGCTTAAACATCCAACACTAGAGCTTTTTTGTGGTTGACTTTTAAGCTATCACCACATTCCCCAATTCTCTTCCACAACCACTCTTCTTCACCATAGCAAGCCCACAGTTTCCGCTCACATTCTCTCTCTCTGGGACTTTCACTCTCTTACCCTAATGGGCTTTACACTTTCACTCTTGCCTTCCTCTTTTTTCGTTTCCCTTCACTCAATTCGGGGGTGGGCTGGTGTGTTCCTTCATTGTCAAATTCATCTTGTTAGGGTGGGTTAATCCCGAATTCTAGCAATGCCTCCTTTCGTTTGGTTGTGGATTCCTCTGGCAAATGTGCAACAGTATTTTGTTTGGTTTGGTTTGGCTTATTATTTGTACTAAGGTTTTTACTTTGTTTTGTCTTCTTATTATGACCCCAGTTAGAGATCTTAGAAGTCGGGTATGCACTCATGTTTTTGGATTTTGTCTTGGAATATACCAAGATATCATCAATAAAATCTATCACAAAAGTGTCAAGAAACTCTTTGAACACCCTGTTAATCAAGTCCATAAACACTGCAGGATCATTGGCCAAATCCAAAAGACATTATAAAGAATTCATAATGTTCATATCTAGCCCTAAACATTGTCTTGGGGATGTCACTATCTTTTAATCTTAATTGATGGTAATCGAAACAAAGGTCGATCTTAGAGAAAATTGTGGCTCCCTATAATTGATCAAAGAGATCGTCAATCTTAGGAAGAGGGTACGTGTTCTTGATGGTTACTTTGTTCAACTCCCCATGCAGTGAACCATCATTTTTCTTCACAAACAAAATTGGTGAAGCCTGGGGTAACACACTCGGACATATGAAACTCTTATCAAGCAACTTTTGAATCTGGGTCTTAAGCTCCTATAACTCAACTAGAGGCATTCTGTATAGGGCTTAAGATATTCGCCAGTATCAACAACATTGGAGAAATCAAGAATGAAAAAAGAGGCAACATATTTTTGAACTTCGGTGATAATGATATTGTTAAAGAGTCTAGATTCATTAAGGATGATTTATTCATCAAGGATTTTACTAATCCTATTGATTTAGTAAGACTGAACCAGGTTGCAAGTGATGAAGCTATTAAAGTGAATTTGCCATCTCACTAATGGGACTTCCTAAAGCAGAACAACCAAGCTTCTCTCGAAATCCTTTTTAAGGTTCTATCCAAAAGCAATTCATGTGAAGCCATCATCGGAGACCAAGAATCCTTTATCGAAAAACAGATGAAGCCTCACTGCCAATATTATTAATTCGAATAAGCAATTAGGTGTGAAAGCGATTGAAGTAAACGAGTTTTAGGCCGTTGAAGAGGTCAATTCATTGAAGAGAGAAAAAAGACAGTTGCGCCATTACTGAGACCCTTAAAGTTCCTTGTGAAGTCTCACATCCCAACAGAACTTTAAATTTCAAACCATTAGTGTACTCTAACATTCCTGTACAAGAAGATCAAACGTCGGCAGGCCCCAATAGAAAGATCGTCCCAGCTAACCTTGGCTTTTGGTATTCCAATATTGATGAGGATGATCCGCTAGCAAATCTATCCCAAGTTTGTGAATCTATTGTCCCCTTCAGAAAAACCACGCCGTCAACCTTAAAGAAGCGACCACATCTGTTCAAGCCATTCCCAAAACATTATGCTAGGCGAAGAACATCCATCTTCAACTATTGGTCTGCCTTAGTCAATTCTGATTTGCTTGAAGAAAGTTGTGCATGAATTCTTTCTCCTAGTCTCCTTCCCAACGAGTCAGTGAAAGCTCCCCCATCTTCTCAAAACTTTAAACATTCAATGATAAATCTCCCTGGCTCAAACATGACTTTTGTCCAAGGTATTTCGAACTCGGAAGCATCTAAATCAAGCCCTACTCAGCAAGACTATAATGTTGAATCAATTGTTTGTGCTAGTAGCAAAGAAGTTGATCAATGTGAAGCTGATGATGACCAAGATGAGATAGAAACTGTAGATTCATATGGCAAAGGCGTTGCTAAATTGTTCCAGTCAAAAGATAACCCGATAATAGGCAAGGTTGATGCTTCCCTTTTCTCTCCCAATTGCAAGAAGACTATCCCTCAGAACTTGATAGCTATCATGGAAGCTTGTGGTATTACTCTCAGTTAATCCTGGGAGCCAGAAGCGAAGTCAGGGTTAGTAGAGGCAGTTGTATACTACAAAAATTCAACCAACATGAAAATTTTATCGTAGAATAAAAGGGGGCTAGGCGATTATTGGAACCAATTAGCTTTAAAGCGTCTAGTGCAAAATACAAATTCAGACATGGTTTTAATCCAAGAGACAAAGAGGGACTCCTTTGACATAGATTTCATTAAATCGTTATGGAGCTCAAAGGACATGGGATGGGTTTTCGTTGAAGCATATGGCAAATTAGGAGGAATGTTTACAATGTGGGACGAAAATAAAACCTCACTCATAGAAGTTCGTGAAGGGGGATATTCGCTGTCAGTTAAATGTACAACTATTAGTAGAAAGTATTGTTGGGTGACAAATGTGTACGGTCCAACCGACTACAAAGAAAGAAAACTCATTTGGCCTAAACTTATATCCCTCTCAGGTTATTGTTTAGGTTCTTGGTGTATCAGTGGAGACTTTAACATTACTAGAAGAATTCAAGAGAAATTTCCCGTGGGAAGAATCACTAGAGGAATGCAAAAATTTAATAAGTTTATATCTGAAGCAAATTTGTTAGAAATTCCTCTCTCAAATGGCAAGTTTACTTGGTCAAGAGAAGGAAGCGTGGTGTCCAGGTCATTGATTGATAGATTTCTAGTATCTAATGAGTGGGATAAAGCACTTGAAAACTCTAGAGTATCAAGGCAAACTCGAGTCTCCTCATATCATTTTCTAATTCTTCTAGAAGTTGGATCCTTCGAACGAGGCCCTTCACCCCTTCATTTTTGCAACAGCTGGCATAAAAGATGCTGTCAGATTATTGAAAGATCCTTAAGCAGTATCAGTTGTCTTGGTTGCTTAAGACCAGAAATTTAGCTTTGTTATCTAAATGGGAATGCGCTTTATGAATTGGGGAAATTCACTTTAGAAGCAAGTAATTAAGAGCATTGACGAAAGTAGTCGCTTCAAATGGCACACGGCTGGTAAGGTGTATGTTAGTCTAAGGAGCCCTTGGATTAGTATATCACATTCGTGGCTGAAAATTGAGGAGTTGGTTGTATTTAAACCAGGGAATGGCAGCCAAATCGCCTTTTGGCTAACCCTAGGATAGATAAAACTTCCTTGATTAATTGGTCTCCAAGACTTCATCAAATTGCAATTAATCCTAATGGATCTGTTGGAGAACATTGGGATTCTTCATCAAATTCATGGAACATCTCCTTTTGTAGATTATTAAAGGAAGAAGAGATTGATGATTTCCAAATTCTCATTGGCATTTTTCATGGGACAATGTGCTCCAAATTCTAATTGGTCCAACCCTCAAAAAGGGCCCCAAATTGTGTTGGTCAAATGCGGCAAAGGTCGTGCTTCCATAATTATGGTTTGAAAGGAACCAACGAGTCTTTCACAATAAAGCTTCTCCTTGGCTTGATCGATTCGAGAATGCAAGACTCAATGCATCCTCTTGGTGCACACTCTGCAGATCTTTTGAAGACTTCTTTATTCAAGTTCTGAATTTGAATTAGAGAGCTTTTATATTCTAGTTGATTAGACCCTTTTATACCATGTTTTGGCCACCTTTGTATTGTCTTGTTGCTCTTAGCTTTGATCTGTATTTGTTCGATGTATCTGCCTAGCCATAGGGGCTTAGTTTCTTTCAATTTTGGTCCTTTGTATTTGGGACTTTCTTCTTTGAACCTTAGAGTACCTTTTGGTTAATTTGTTGCTATTAGTTTGGAGATATGAGAGTGCTACAGAGATGTCAACCTAGTTGAGATGTCCTGGTGTACTACCTGATCCTTAGGTTACTTTATGTTATATGCTTTTGTAAATTGAGATATTGTCTAAATTCATTATATCAATGAAAGAGACTTGTTTCCTTTTCGAAAAAAAAAAGTATCAACACTGGCCAATATGCCCCATGTGTCTTTGTTGATCAACTTTCTTGCTTTTATAGCTAAAACTACTTTAAGCAAGACCTTGGTCTTGACCCCTTTAAATTTAAAATTGGTTTTCACTGGATAAGCAACCTCCTTAAGGAAGCAATCTATGTTTGCATGATTTTCAACCAACCAACCCATGCCTAAGATGACATCAAAGTCTCGCATGTCTGGAATTATCAAAGTTACATCTAACATTCATTGTGTTAATAAAACCTAACATGTTTTTACTCTTTAACATGCCAAAACAATAACTCAAGATGGAGTAGAAACCGACAAAACATTCTATAAAGGTTTTCATGCTAGCATATTTTCTCATCAGACATCACTGGAACTATCACAACAGTATTAGAATTCTAGAACTCTCGTCGAGTCGTAACGTAAACCCTGACTTGTTGCTGTTGTCTTCCCGAAGATGATAGCAACAAGACCCTAACTACTTTTAGCACTACAAGATCTTCCAGTGCCAAGAACACAAGGAAATGTCCAAAATGTGCCTACAGGAGATCTACCTCAAGACCCACCAATGGTCCCACAGCTGCAACCCCACCCAATTTTTAGAATGATTTCGCTGCTACGATTAGGAGTGGTCATGGTTTGGTGGTAAAGCCAAACCAAAAATTGTTAAAAATGTATATGTAAAACCAAACCAAATTGCTTTCACAATTCAATTATCGGTTTTGATTTTTTCGTTTTTTCTTTTTTTTTTTTTTTTGTTTTATTCTTTTTGTTTAACGCTTGTCTTTGAAGTTTTAACAACAAAAGGAAAGATTCATTTGAATGATTTGTTCAAAACCCCTTTTGTTTGTTTGATGAGAAAAAGGAGAGTATCAAAGTGAAAAAATTGCACAATGTAAACAAGAAGAATCTGTCCAAAATACCAACAAGTTCCCAAAAACTAAATTAACGATCATCCAAGACGAAGGATCTGTCCAAAATGCCAACCATTCTCCCAAATGTTTTTATGCTAGCATATTTTCTCATCAGACATCACTGGAACTCTAGAGAAAATATCATTGTCAAAGAAGGAAGATGAGTGACGATCGGCTTGAGATCTGATAAGTGAGCTGCATATCTAAGAGGTGAGAGCCAAGAGAGAGGAGACGAGTGACAGAGGGGATTCGAAGCGAAATCGAGAGAGACGGATGGAGGGAGACAAGGGACGAAGGGACGAGAGGAGGATGGACAATGGAGGGAGACAAGAGTTCAAGAGACTGAGAGGAGGATGGACAATGGAGGGAGACAAGAGTTCAAGAGACTGA

mRNA sequence

AAAAACATAGGCTTGGAACTGAGCAGAAGAGCGCCCAAAAATAAATTGCAAGACCGCAAAGACAAAGAGCATGTGATCAGAAACAAAAAAGAAGGTAATGGAAAGCTTTGTAACGTGGGTCAAGCAGAGGCATTAAAATGCAACAAGTTCCAAATATCAACTCGCGAAATGGAGGAAACAAGGCCACTTTGTCCATCATACCACAATAAAGGAGACACCAGCCCAAAAGAATTAAACGCCACCTCAAAGTGGATGATATACCAAAATACTGTTACTAGACAAATAAACCAAAACAGACGCAACAAGACCCTAACTACTTTTAGCACTACAAGATCTTCCAGTGCCAAGAACACAAGGAAATGTCCAAAATGTGCCTACAGGAGATCTACCTCAAGACCCACCAATGAGGTGAGAGCCAAGAGAGAGGAGACGAGTGACAGAGGGGATTCGAAGCGAAATCGAGAGAGACGGATGGAGGGAGACAAGGGACGAAGGGACGAGAGGAGGATGGACAATGGAGGGAGACAAGAGTTCAAGAGACTGAGAGGAGGATGGACAATGGAGGGAGACAAGAGTTCAAGAGACTGA

Coding sequence (CDS)

AAAAACATAGGCTTGGAACTGAGCAGAAGAGCGCCCAAAAATAAATTGCAAGACCGCAAAGACAAAGAGCATGTGATCAGAAACAAAAAAGAAGGTAATGGAAAGCTTTGTAACGTGGGTCAAGCAGAGGCATTAAAATGCAACAAGTTCCAAATATCAACTCGCGAAATGGAGGAAACAAGGCCACTTTGTCCATCATACCACAATAAAGGAGACACCAGCCCAAAAGAATTAAACGCCACCTCAAAGTGGATGATATACCAAAATACTGTTACTAGACAAATAAACCAAAACAGACGCAACAAGACCCTAACTACTTTTAGCACTACAAGATCTTCCAGTGCCAAGAACACAAGGAAATGTCCAAAATGTGCCTACAGGAGATCTACCTCAAGACCCACCAATGAGGTGAGAGCCAAGAGAGAGGAGACGAGTGACAGAGGGGATTCGAAGCGAAATCGAGAGAGACGGATGGAGGGAGACAAGGGACGAAGGGACGAGAGGAGGATGGACAATGGAGGGAGACAAGAGTTCAAGAGACTGAGAGGAGGATGGACAATGGAGGGAGACAAGAGTTCAAGAGACTGA

Protein sequence

KNIGLELSRRAPKNKLQDRKDKEHVIRNKKEGNGKLCNVGQAEALKCNKFQISTREMEETRPLCPSYHNKGDTSPKELNATSKWMIYQNTVTRQINQNRRNKTLTTFSTTRSSSAKNTRKCPKCAYRRSTSRPTNEVRAKREETSDRGDSKRNRERRMEGDKGRRDERRMDNGGRQEFKRLRGGWTMEGDKSSRD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G052890.1CcUC03G052890.1mRNA