Homology
BLAST of CcUC03G052850 vs. NCBI nr
Match:
XP_038879303.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879304.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879305.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879306.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879307.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida])
HSP 1 Score: 1287.3 bits (3330), Expect = 0.0e+00
Identity = 681/824 (82.65%), Postives = 712/824 (86.41%), Query Frame = 0
Query: 1 MRAMNPSLPFPNQTC-----LNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVANQ 60
MRAMNPS PFPNQT NPNPN IPDSSH QPQNPPLDL SSLSSLKNLI+VANQ
Sbjct: 1 MRAMNPS-PFPNQTFPSLLPSNPNPNFHIPDSSHFQPQNPPLDLFSSLSSLKNLINVANQ 60
Query: 61 TLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQLL 120
TLQSLSYLTLTP PS Y N+S LVQC FDRRHRVPPHSLFRHSL+CPSASLPRIDPTQLL
Sbjct: 61 TLQSLSYLTLTPTPSHYGNDSYLVQCHFDRRHRVPPHSLFRHSLICPSASLPRIDPTQLL 120
Query: 121 QSLLYPQT-LHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSL YPQT LHSSRQLVNEKRF QMLPDSD DLCFSLND+TDA+SNFFY+DCP VVA SN
Sbjct: 121 QSLHYPQTLLHSSRQLVNEKRFSQMLPDSDADLCFSLNDFTDATSNFFYLDCPSVVASSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDE+SKVFTLPR+LAVHCANF+GND PEMKSTL+G+RILPSDLWVLRSEVE W++YP+MY
Sbjct: 181 LDEISKVFTLPRILAVHCANFIGNDHPEMKSTLKGLRILPSDLWVLRSEVEAWDEYPNMY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEMAMDSHLMTWIIANSPRYG V+DVAMRDH+FLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMAMDSHLMTWIIANSPRYGAVLDVAMRDHVFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
QIAL NGN GS N CF CPILIQVLMWLASQLSVLYGET+GKFFAI+MLRQCILDAA
Sbjct: 301 QIALENGNGMEGGSGNSCFNCPILIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LRLLL PSE KP ESLTL EGSHNLETSCSDTQSVKLNELDQKVVNN NVTG+ETVNCR
Sbjct: 361 LRLLLLPSEQKPVESLTLGEGSHNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRE 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIK LRFSHLQTKYQRVSEYNYISQRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKTLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQFHNE
Sbjct: 481 IIEHDGLPKQQFHNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
DTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 ---------------DTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIGCFVKGPEE G KSEQPTDHNITRNIIADGHTKGSNDS+GDA SSSHSK
Sbjct: 601 MEEIMKAGGIGCFVKGPEERGTKSEQPTDHNITRNIIADGHTKGSNDSHGDARLSSSHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQSNYDS Y S+KPQK HYGH G PEDERKSS+KDKYDRDH+HRFSD+SSSPSQSHKWK
Sbjct: 661 KQSNYDSGYSFSEKPQKDHYGHNGSPEDERKSSNKDKYDRDHHHRFSDRSSSPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYPSDRDDEVLAETRHHETRKLSSSSSN+HGFRSSSSSRSGGGSSARKDGHKLRASDSRK
Sbjct: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNYHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 763
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKSR 813
RNMADNHSSEHLVFNSFNDRYTPSECHD+LEDDYST S+LS+SR
Sbjct: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDKLEDDYSTASRLSRSR 763
BLAST of CcUC03G052850 vs. NCBI nr
Match:
TYJ97003.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 641/824 (77.79%), Postives = 678/824 (82.28%), Query Frame = 0
Query: 1 MRAMNPSLPF-PNQTC-----LNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVAN 60
MRA+NPSLPF PNQT NPNPN I DSSHS+ Q+P LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C FDRRHRVPPHSLFRHSLLCPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSD DLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDEMSKVFTLPRVLAVHCANFVGND EM STL GIRILPSDLW+LRSEVEIWNDYP+ Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEM ++SHLMTWII NSPRYGVVIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
Q+AL GN GS N CFKCPILIQVLMWLASQLSVLYGET+GKFFA+NMLRQCILDAA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LRLLL PSE K E LTL +G H+LE SCSD QSVK+NELDQKVVNN NVTG ETVNCRV
Sbjct: 361 LRLLL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQ +NE
Sbjct: 481 IIEHDGLPKQQSYNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
D NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 ---------------DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIGCFVKGPEE GIKSEQP+DHNITRNI+AD HT+GSND GDA HSS HSK
Sbjct: 601 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQS +DS YL S KPQKGHY HYG PEDERK S KDKYDRDHYHRFSDQSS PSQSHKWK
Sbjct: 661 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYP+DRDDEV AETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 721 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 756
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKSR 813
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVS+LSKSR
Sbjct: 781 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of CcUC03G052850 vs. NCBI nr
Match:
XP_008443753.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo])
HSP 1 Score: 1177.9 bits (3046), Expect = 0.0e+00
Identity = 640/823 (77.76%), Postives = 677/823 (82.26%), Query Frame = 0
Query: 1 MRAMNPSLPF-PNQTC-----LNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVAN 60
MRA+NPSLPF PNQT NPNPN I DSSHS+ Q+P LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C FDRRHRVPPHSLFRHSLLCPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSD DLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDEMSKVFTLPRVLAVHCANFVGND EM STL GIRILPSDLW+LRSEVEIWNDYP+ Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEM ++SHLMTWII NSPRYGVVIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
Q+AL GN GS N CFKCPILIQVLMWLASQLSVLYGET+GKFFA+NMLRQCILDAA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LRLLL PSE K E LTL +G H+LE SCSD QSVK+NELDQKVVNN NVTG ETVNCRV
Sbjct: 361 LRLLL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQ +NE
Sbjct: 481 IIEHDGLPKQQSYNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
D NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 ---------------DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIGCFVKGPEE GIKSEQP+DHNITRNI+AD HT+GSND GDA HSS HSK
Sbjct: 601 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQS +DS YL S KPQKGHY HYG PEDERK S KDKYDRDHYHRFSDQSS PSQSHKWK
Sbjct: 661 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYP+DRDDEV AETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 721 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 755
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKS 812
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVS+LSKS
Sbjct: 781 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755
BLAST of CcUC03G052850 vs. NCBI nr
Match:
KAA0038392.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 640/824 (77.67%), Postives = 677/824 (82.16%), Query Frame = 0
Query: 1 MRAMNPSLPF-PNQTC-----LNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVAN 60
MRA+NPSLPF PNQT NPNPN I DSSHS+ Q+P LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C FDRRHRVPPHSLFRHSLLCPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSD DLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDEMSKVFTLPRVLAVHCANFVGND EM STL GIRILPSDLW+LRSEVEIWNDYP+ Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEM ++SHLMTWII NSPRYGVVIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
Q+AL GN GS N CFKCPILIQVLMWLASQLSVLYGET+GKFFA+NMLRQCILDAA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LRLLL PSE K E LTL +G H+LE SCSD QSVK+NELDQKVVNN NVTG ETVNCRV
Sbjct: 361 LRLLL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQ +NE
Sbjct: 481 IIEHDGLPKQQSYNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
D NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 ---------------DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIGCFVKGPEE GIKSEQP+DHNITRNI+AD HT+GSND GDA HSS HSK
Sbjct: 601 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQS +DS YL S KPQKGHY YG PEDERK S KDKYDRDHYHRFSDQSS PSQSHKWK
Sbjct: 661 KQSFHDSRYLVSDKPQKGHYEQYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYP+DRDDEV AETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 721 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 756
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKSR 813
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVS+LSKSR
Sbjct: 781 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of CcUC03G052850 vs. NCBI nr
Match:
XP_031743009.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus] >XP_031743013.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus])
HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 639/824 (77.55%), Postives = 672/824 (81.55%), Query Frame = 0
Query: 1 MRAMNPSLP------FPNQTCLNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVAN 60
MRA+NPSLP FPN NPNPN I DSSHSQ Q+PPLDLSSS SSL NLIH AN
Sbjct: 1 MRAINPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFAN 60
Query: 61 QTLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQL 120
QTLQSLSYLT PS +AN+S L+ C FDRRHRVPPHSLFRHSLLCPSASL IDPTQL
Sbjct: 61 QTLQSLSYLT----PSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSSRQLVNE RF Q+LPDSD DLCFSL DY+DA+SNFFYVDCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDEMSKVFTLPRVLAVHCANFVGND EM STL GIRILPSDLW LRSEVEIWNDYPS Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEMA++SHLMTWII NSPRYGVVIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGNG----SANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
Q+AL GNG S N CFKCPILIQVLMWLASQLSVLYGET+G FFA+NMLRQCILDAA
Sbjct: 301 QVALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LLL SE K ESLTL EGSH+LE SCSDTQSVK+NELDQKVVNN VNC V
Sbjct: 361 SGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNN-----GHAVNCSV 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIKALRF+HLQTKYQRVSEYN I QRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQ HNE
Sbjct: 481 IIEHDGLPKQQSHNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
QD NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 --------------QDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIG FVKGPEE GIKSEQP+DHN+T+NI AD HT+GSNDSYGDA HSS HSK
Sbjct: 601 MEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITADVHTRGSNDSYGDARHSSGHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQSNYDS YL S+KPQK HYGHY PEDERK SSKDKYDRDHYHRF DQSS PSQSHKWK
Sbjct: 661 KQSNYDSRYLASEKPQKSHYGHYVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYP+DRDDEV AETRHHET+KL+SSSS HG RSSSSSRSGGGSSARK +KLRASDS K
Sbjct: 721 RYPNDRDDEVTAETRHHETKKLTSSSS--HG-RSSSSSRSGGGSSARKVSNKLRASDSWK 753
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKSR 813
N ADNHSSEHLVFNSFNDRYTPS+CHD+LED+YSTVS+LSKSR
Sbjct: 781 MNTADNHSSEHLVFNSFNDRYTPSDCHDELEDEYSTVSRLSKSR 753
BLAST of CcUC03G052850 vs. ExPASy Swiss-Prot
Match:
Q9M8X2 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP48 PE=3 SV=1)
HSP 1 Score: 404.8 bits (1039), Expect = 2.3e-111
Identity = 306/828 (36.96%), Postives = 424/828 (51.21%), Query Frame = 0
Query: 5 NPSLPFPNQTCLNPNPNI-----------PDSSHSQPQNPPL-DLSSSLSSLKNLIHVAN 64
NP+L F + N NPN P++ P PP+ +LS +LSSLK+L+
Sbjct: 14 NPNL-FYHYPPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELSGTLSSLKSLLSECQ 73
Query: 65 QTLQSLSYLTLTPNPS--RYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPT 124
+TL SLS + S + N V+C FD H +PP +LF HSL CP+ +D
Sbjct: 74 RTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT----LDLI 133
Query: 125 QLLQSL-LYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVA 184
LL+S Y TL +L L + DGDLC SL+D D SNFFY DCPG V
Sbjct: 134 HLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFYRDCPGAVK 193
Query: 185 LSNLDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEG-IRILPSDLWVLRSEVEIWNDY 244
S LD + TLP VL+V C++FVG+D+ K L+ + +LPSDL +++E++ W D+
Sbjct: 194 FSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKNEIDQWRDF 253
Query: 245 PSMYSFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKE 304
PS YS VL S++GS++ S L WI+ NS RYGV+ID MRDHIFLLFRLC + KE
Sbjct: 254 PSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVKE 313
Query: 305 ALGFQI---ALVNGNGSANGC----FKCPILIQVLMWLASQLSVLYGETSGKFFAINMLR 364
A GF++ A G C F+CP+ IQVL WLASQL+VLYGE +GKFFA++M +
Sbjct: 314 ACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMFK 373
Query: 365 QCILDAALRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELD---QKVVNNCN- 424
QCI+++A +++LF E ++ + E D +L D +K N +
Sbjct: 374 QCIVESASQVMLFRLEGTRSKCSGVVE----------DLDDARLRNKDVIMEKPFENSSG 433
Query: 425 -VTGKETVNCRVILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRA 484
GK + +VI VS+V+AAVAAL+ER LLEEKI+A+R++ T+YQR +E +++ +A
Sbjct: 434 GECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRAAELGFMTAKA 493
Query: 485 CEERKRRCSYRPIIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAI 544
EER RRCSYRPII+HDG P+Q+ N
Sbjct: 494 DEERNRRCSYRPIIDHDGRPRQRSLN---------------------------------- 553
Query: 545 NDEAAAGQLLNVQLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRS 604
QD +K KTREELLAEERDYKRRRMSYRGKK KR+
Sbjct: 554 --------------------------QDMDKMKTREELLAEERDYKRRRMSYRGKKVKRT 613
Query: 605 TLQVTRDIIEEYMEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDS 664
QV D+IEEY EEI AGGIGCF KG ++S P
Sbjct: 614 PRQVLHDMIEEYTEEIKLAGGIGCFEKGMP---LQSRSPI-------------------- 673
Query: 665 YGDAIHSSSHSKKQSNYDSSYLGSQKPQKG-HYGHYGCPEDERKSSSKDKYDRDHYHRFS 724
+ +K+S++ S + K KG + P D R++S K K + +
Sbjct: 674 --------GNDQKESDFGYSIPSTDKQWKGENRADIEYPIDNRQNSDKVK----RHDEYD 710
Query: 725 DQSSSPSQSHKWKRYPSDRDDEV--LAETRHHE--------TRKLSSSSSNFHGFRSSSS 784
SS QSH+ ++ RDD++ + +H++ T++ S ++ +RSS
Sbjct: 734 SGSSQRQQSHRSYKHSDRRDDKLRDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSSRE 710
Query: 785 SRSGGGSSARKDGHKLRASDSRKRNMADNHSSEHLVFNSFNDRYTPSE 794
S + R D + R+ R +N+ F DRY P+E
Sbjct: 794 KSSSDYKTKRDDPYDRRSQQPRNQNL-------------FEDRYIPTE 710
BLAST of CcUC03G052850 vs. ExPASy TrEMBL
Match:
A0A5D3BCH1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00550 PE=4 SV=1)
HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 641/824 (77.79%), Postives = 678/824 (82.28%), Query Frame = 0
Query: 1 MRAMNPSLPF-PNQTC-----LNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVAN 60
MRA+NPSLPF PNQT NPNPN I DSSHS+ Q+P LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C FDRRHRVPPHSLFRHSLLCPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSD DLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDEMSKVFTLPRVLAVHCANFVGND EM STL GIRILPSDLW+LRSEVEIWNDYP+ Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEM ++SHLMTWII NSPRYGVVIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
Q+AL GN GS N CFKCPILIQVLMWLASQLSVLYGET+GKFFA+NMLRQCILDAA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LRLLL PSE K E LTL +G H+LE SCSD QSVK+NELDQKVVNN NVTG ETVNCRV
Sbjct: 361 LRLLL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQ +NE
Sbjct: 481 IIEHDGLPKQQSYNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
D NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 ---------------DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIGCFVKGPEE GIKSEQP+DHNITRNI+AD HT+GSND GDA HSS HSK
Sbjct: 601 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQS +DS YL S KPQKGHY HYG PEDERK S KDKYDRDHYHRFSDQSS PSQSHKWK
Sbjct: 661 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYP+DRDDEV AETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 721 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 756
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKSR 813
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVS+LSKSR
Sbjct: 781 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of CcUC03G052850 vs. ExPASy TrEMBL
Match:
A0A1S3B9I2 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487266 PE=4 SV=1)
HSP 1 Score: 1177.9 bits (3046), Expect = 0.0e+00
Identity = 640/823 (77.76%), Postives = 677/823 (82.26%), Query Frame = 0
Query: 1 MRAMNPSLPF-PNQTC-----LNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVAN 60
MRA+NPSLPF PNQT NPNPN I DSSHS+ Q+P LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C FDRRHRVPPHSLFRHSLLCPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSD DLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDEMSKVFTLPRVLAVHCANFVGND EM STL GIRILPSDLW+LRSEVEIWNDYP+ Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEM ++SHLMTWII NSPRYGVVIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
Q+AL GN GS N CFKCPILIQVLMWLASQLSVLYGET+GKFFA+NMLRQCILDAA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LRLLL PSE K E LTL +G H+LE SCSD QSVK+NELDQKVVNN NVTG ETVNCRV
Sbjct: 361 LRLLL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQ +NE
Sbjct: 481 IIEHDGLPKQQSYNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
D NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 ---------------DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIGCFVKGPEE GIKSEQP+DHNITRNI+AD HT+GSND GDA HSS HSK
Sbjct: 601 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQS +DS YL S KPQKGHY HYG PEDERK S KDKYDRDHYHRFSDQSS PSQSHKWK
Sbjct: 661 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYP+DRDDEV AETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 721 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 755
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKS 812
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVS+LSKS
Sbjct: 781 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755
BLAST of CcUC03G052850 vs. ExPASy TrEMBL
Match:
A0A5A7T4I0 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002790 PE=4 SV=1)
HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 640/824 (77.67%), Postives = 677/824 (82.16%), Query Frame = 0
Query: 1 MRAMNPSLPF-PNQTC-----LNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVAN 60
MRA+NPSLPF PNQT NPNPN I DSSHS+ Q+P LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C FDRRHRVPPHSLFRHSLLCPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSD DLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMY 240
LDEMSKVFTLPRVLAVHCANFVGND EM STL GIRILPSDLW+LRSEVEIWNDYP+ Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVL+S+LGSEM ++SHLMTWII NSPRYGVVIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAA 360
Q+AL GN GS N CFKCPILIQVLMWLASQLSVLYGET+GKFFA+NMLRQCILDAA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRV 420
LRLLL PSE K E LTL +G H+LE SCSD QSVK+NELDQKVVNN NVTG ETVNCRV
Sbjct: 361 LRLLL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRP 480
ILVSQVAAAVAALHERFLLEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRC+YRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNV 540
IIEHDGLPKQQ +NE
Sbjct: 481 IIEHDGLPKQQSYNE--------------------------------------------- 540
Query: 541 QLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
D NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 541 ---------------DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 600
Query: 601 MEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDAIHSSSHSK 660
MEEIMKAGGIGCFVKGPEE GIKSEQP+DHNITRNI+AD HT+GSND GDA HSS HSK
Sbjct: 601 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 660
Query: 661 KQSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWK 720
KQS +DS YL S KPQKGHY YG PEDERK S KDKYDRDHYHRFSDQSS PSQSHKWK
Sbjct: 661 KQSFHDSRYLVSDKPQKGHYEQYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 720
Query: 721 RYPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 780
RYP+DRDDEV AETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 721 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 756
Query: 781 RNMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSKLSKSR 813
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVS+LSKSR
Sbjct: 781 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of CcUC03G052850 vs. ExPASy TrEMBL
Match:
A0A6J1KU07 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497626 PE=4 SV=1)
HSP 1 Score: 1098.2 bits (2839), Expect = 0.0e+00
Identity = 600/814 (73.71%), Postives = 650/814 (79.85%), Query Frame = 0
Query: 4 MNPSLP-----FPNQTCLNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVANQTLQ 63
MNPSLP FP NPNPN +PDS + PPLDLSSSLSSL+NLIHVANQTLQ
Sbjct: 1 MNPSLPSSNLTFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTLQ 60
Query: 64 SLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQLLQSL 123
SLSYLTL PS ++S VQC FDRRHRVPPHSLF HSLLCPSA PRIDPTQLLQSL
Sbjct: 61 SLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSL 120
Query: 124 LYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSNLDEM 183
LYP+TL SSR+LVNEKRF Q +PDSD DLCFSLNDY+D SSNFFY+DCPGVVALSN DEM
Sbjct: 121 LYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDEM 180
Query: 184 SKVFTLPRVLAVHCANFVGND--DPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMYSF 243
SKVFTLPRVLAV CANFV +D D EMKS+L+GIR+LPSDLW LR EVE+WNDYPS+YS
Sbjct: 181 SKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSH 240
Query: 244 VVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGFQI 303
+V++S+LGSEMA+D+ L TWIIANSPRYGV+IDVAMRDHIFLLFRLCFMAI KEA+GFQI
Sbjct: 241 IVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQI 300
Query: 304 ALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAALR 363
AL NGN GS N FKCPIL+QVL+WLASQLSVLYGE SGKFFAINMLRQ IL AA
Sbjct: 301 ALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASG 360
Query: 364 LLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRVIL 423
L L P E K ES TL EGSHNL +SCSDTQSV L +LD KV+NN VTG+ETVNCRVI
Sbjct: 361 LSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVIF 420
Query: 424 VSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRPII 483
VSQVAAAVAALHERFLLEEKIKALRFSHLQTK+Q VSE+NYISQRACEERKRRCSYRPII
Sbjct: 421 VSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPII 480
Query: 484 EHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNVQL 543
EHDGLPKQQ H+E
Sbjct: 481 EHDGLPKQQSHDE----------------------------------------------- 540
Query: 544 LMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYME 603
QD +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+
Sbjct: 541 ------------QDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMD 600
Query: 604 EIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDA-IHSSSHSKK 663
EIMKAGGIG FVKG EE GIKSEQPTDH ITR+ IADGHTKGSN SYG+ HSSSHS+K
Sbjct: 601 EIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSRK 660
Query: 664 QSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWKR 723
QSNYD+ Y S+KP KG GHYG PEDERK SKDKYDR+HYHRFS++SSSPSQSHKWKR
Sbjct: 661 QSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSHKWKR 720
Query: 724 YPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRKR 783
YPSDRDDE AETRHH++R LSSSSSN+HGFRSSSSSRSGG SSARKD HKLRASDS KR
Sbjct: 721 YPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASDSWKR 750
Query: 784 NMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYS 804
N ADNHSS+ LV NSFNDRYTPS+CHDQLEDD+S
Sbjct: 781 NTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHS 750
BLAST of CcUC03G052850 vs. ExPASy TrEMBL
Match:
A0A6J1KPX5 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497626 PE=4 SV=1)
HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 599/814 (73.59%), Postives = 649/814 (79.73%), Query Frame = 0
Query: 4 MNPSLP-----FPNQTCLNPNPN--IPDSSHSQPQNPPLDLSSSLSSLKNLIHVANQTLQ 63
MNPSLP FP NPNPN +PDS + PPLDLSSSLSSL+NLIHVANQTLQ
Sbjct: 1 MNPSLPSSNLTFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTLQ 60
Query: 64 SLSYLTLTPNPSRYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPTQLLQSL 123
SLSYLTL PS ++S VQC FDRRHRVPPHSLF HSLLCPSA PRIDPTQLLQSL
Sbjct: 61 SLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSL 120
Query: 124 LYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVALSNLDEM 183
LYP+TL SSR+LVNEKRF Q +PDSD DLCFSLNDY+D SSNFFY+DCPGVVALSN DEM
Sbjct: 121 LYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDEM 180
Query: 184 SKVFTLPRVLAVHCANFVGND--DPEMKSTLEGIRILPSDLWVLRSEVEIWNDYPSMYSF 243
SKVFTLPRVLAV CANFV +D D EMKS+L+GIR+LPSDLW LR EVE+WNDYPS+YS
Sbjct: 181 SKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSH 240
Query: 244 VVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKEALGFQI 303
+V++S+LGSEMA+D+ L TWIIANSPRYGV+IDVAMRDHIFLLFRLCFMAI KEA+GFQI
Sbjct: 241 IVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQI 300
Query: 304 ALVNGN----GSANGCFKCPILIQVLMWLASQLSVLYGETSGKFFAINMLRQCILDAALR 363
AL NGN GS N FKCPIL+QVL+WLASQLSVLYGE SGKFFAINMLRQ IL AA
Sbjct: 301 ALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASG 360
Query: 364 LLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELDQKVVNNCNVTGKETVNCRVIL 423
L L P E K ES TL EGSHNL +SCSDTQSV L +LD KV+NN VTG+ETVNCRVI
Sbjct: 361 LSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVIF 420
Query: 424 VSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCSYRPII 483
VSQVAAAVAALHERFLLEEKIKALRFSHLQTK+Q VSE+NYISQRACEERKRRCSYRPII
Sbjct: 421 VSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPII 480
Query: 484 EHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAINDEAAAGQLLNVQL 543
EHDGLPKQQ H+E
Sbjct: 481 EHDGLPKQQSHDE----------------------------------------------- 540
Query: 544 LMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYME 603
D +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+
Sbjct: 541 -------------DRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMD 600
Query: 604 EIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDSYGDA-IHSSSHSKK 663
EIMKAGGIG FVKG EE GIKSEQPTDH ITR+ IADGHTKGSN SYG+ HSSSHS+K
Sbjct: 601 EIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSRK 660
Query: 664 QSNYDSSYLGSQKPQKGHYGHYGCPEDERKSSSKDKYDRDHYHRFSDQSSSPSQSHKWKR 723
QSNYD+ Y S+KP KG GHYG PEDERK SKDKYDR+HYHRFS++SSSPSQSHKWKR
Sbjct: 661 QSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSHKWKR 720
Query: 724 YPSDRDDEVLAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRKR 783
YPSDRDDE AETRHH++R LSSSSSN+HGFRSSSSSRSGG SSARKD HKLRASDS KR
Sbjct: 721 YPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASDSWKR 749
Query: 784 NMADNHSSEHLVFNSFNDRYTPSECHDQLEDDYS 804
N ADNHSS+ LV NSFNDRYTPS+CHDQLEDD+S
Sbjct: 781 NTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHS 749
BLAST of CcUC03G052850 vs. TAIR 10
Match:
AT3G04160.1 (unknown protein; Has 1711 Blast hits to 1353 proteins in 195 species: Archae - 0; Bacteria - 64; Metazoa - 693; Fungi - 201; Plants - 207; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). )
HSP 1 Score: 404.8 bits (1039), Expect = 1.6e-112
Identity = 306/828 (36.96%), Postives = 424/828 (51.21%), Query Frame = 0
Query: 5 NPSLPFPNQTCLNPNPNI-----------PDSSHSQPQNPPL-DLSSSLSSLKNLIHVAN 64
NP+L F + N NPN P++ P PP+ +LS +LSSLK+L+
Sbjct: 14 NPNL-FYHYPPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELSGTLSSLKSLLSECQ 73
Query: 65 QTLQSLSYLTLTPNPS--RYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPT 124
+TL SLS + S + N V+C FD H +PP +LF HSL CP+ +D
Sbjct: 74 RTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT----LDLI 133
Query: 125 QLLQSL-LYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVA 184
LL+S Y TL +L L + DGDLC SL+D D SNFFY DCPG V
Sbjct: 134 HLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFYRDCPGAVK 193
Query: 185 LSNLDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEG-IRILPSDLWVLRSEVEIWNDY 244
S LD + TLP VL+V C++FVG+D+ K L+ + +LPSDL +++E++ W D+
Sbjct: 194 FSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKNEIDQWRDF 253
Query: 245 PSMYSFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKE 304
PS YS VL S++GS++ S L WI+ NS RYGV+ID MRDHIFLLFRLC + KE
Sbjct: 254 PSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVKE 313
Query: 305 ALGFQI---ALVNGNGSANGC----FKCPILIQVLMWLASQLSVLYGETSGKFFAINMLR 364
A GF++ A G C F+CP+ IQVL WLASQL+VLYGE +GKFFA++M +
Sbjct: 314 ACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMFK 373
Query: 365 QCILDAALRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELD---QKVVNNCN- 424
QCI+++A +++LF E ++ + E D +L D +K N +
Sbjct: 374 QCIVESASQVMLFRLEGTRSKCSGVVE----------DLDDARLRNKDVIMEKPFENSSG 433
Query: 425 -VTGKETVNCRVILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYISQRA 484
GK + +VI VS+V+AAVAAL+ER LLEEKI+A+R++ T+YQR +E +++ +A
Sbjct: 434 GECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRAAELGFMTAKA 493
Query: 485 CEERKRRCSYRPIIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPVAI 544
EER RRCSYRPII+HDG P+Q+ N
Sbjct: 494 DEERNRRCSYRPIIDHDGRPRQRSLN---------------------------------- 553
Query: 545 NDEAAAGQLLNVQLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAKRS 604
QD +K KTREELLAEERDYKRRRMSYRGKK KR+
Sbjct: 554 --------------------------QDMDKMKTREELLAEERDYKRRRMSYRGKKVKRT 613
Query: 605 TLQVTRDIIEEYMEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSNDS 664
QV D+IEEY EEI AGGIGCF KG ++S P
Sbjct: 614 PRQVLHDMIEEYTEEIKLAGGIGCFEKGMP---LQSRSPI-------------------- 673
Query: 665 YGDAIHSSSHSKKQSNYDSSYLGSQKPQKG-HYGHYGCPEDERKSSSKDKYDRDHYHRFS 724
+ +K+S++ S + K KG + P D R++S K K + +
Sbjct: 674 --------GNDQKESDFGYSIPSTDKQWKGENRADIEYPIDNRQNSDKVK----RHDEYD 710
Query: 725 DQSSSPSQSHKWKRYPSDRDDEV--LAETRHHE--------TRKLSSSSSNFHGFRSSSS 784
SS QSH+ ++ RDD++ + +H++ T++ S ++ +RSS
Sbjct: 734 SGSSQRQQSHRSYKHSDRRDDKLRDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSSRE 710
Query: 785 SRSGGGSSARKDGHKLRASDSRKRNMADNHSSEHLVFNSFNDRYTPSE 794
S + R D + R+ R +N+ F DRY P+E
Sbjct: 794 KSSSDYKTKRDDPYDRRSQQPRNQNL-------------FEDRYIPTE 710
BLAST of CcUC03G052850 vs. TAIR 10
Match:
AT3G04160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage. )
HSP 1 Score: 393.3 bits (1009), Expect = 4.8e-109
Identity = 304/830 (36.63%), Postives = 420/830 (50.60%), Query Frame = 0
Query: 5 NPSLPFPNQTCLNPNPNI-----------PDSSHSQPQNPPL-DLSSSLSSLKNLIHVAN 64
NP+L F + N NPN P++ P PP+ +LS +LSSLK+L+
Sbjct: 14 NPNL-FYHYPPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELSGTLSSLKSLLSECQ 73
Query: 65 QTLQSLSYLTLTPNPS--RYANNSDLVQCQFDRRHRVPPHSLFRHSLLCPSASLPRIDPT 124
+TL SLS + S + N V+C FD H +PP +LF HSL CP+ +D
Sbjct: 74 RTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT----LDLI 133
Query: 125 QLLQSL-LYPQTLHSSRQLVNEKRFPQMLPDSDGDLCFSLNDYTDASSNFFYVDCPGVVA 184
LL+S Y TL +L L + DGDLC SL+D D SNFFY DCPG V
Sbjct: 134 HLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFYRDCPGAVK 193
Query: 185 LSNLDEMSKVFTLPRVLAVHCANFVGNDDPEMKSTLEG-IRILPSDLWVLRSEVEIWNDY 244
S LD + TLP VL+V C++FVG+D+ K L+ + +LPSDL +++E++ W D+
Sbjct: 194 FSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKNEIDQWRDF 253
Query: 245 PSMYSFVVLQSLLGSEMAMDSHLMTWIIANSPRYGVVIDVAMRDHIFLLFRLCFMAIYKE 304
PS YS VL S++GS++ S L WI+ NS RYGV+ID MRDHIFLLFRLC + KE
Sbjct: 254 PSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVKE 313
Query: 305 ALGFQI---ALVNGNGSANGC----FKCPILIQVLMWLASQLSVLYGETSGKFFAINMLR 364
A GF++ A G C F+CP+ IQVL WLASQL+VLYGE +GKFFA++M +
Sbjct: 314 ACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMFK 373
Query: 365 QCILDAALRLLLFPSEPKPAESLTLAEGSHNLETSCSDTQSVKLNELD---QKVVNNCN- 424
QCI+++A +++LF E ++ + E D +L D +K N +
Sbjct: 374 QCIVESASQVMLFRLEGTRSKCSGVVE----------DLDDARLRNKDVIMEKPFENSSG 433
Query: 425 -VTGKETVNCRVILVSQVAAAVAALHERFLLEEKIKALRFSHLQTKYQRVSEYNYIS--Q 484
GK + +VI VS+V+AAVAAL+ER LLEEKI+A+R++ T+YQR+ ++S
Sbjct: 434 GECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRIISCLHLSLIP 493
Query: 485 RACEERKRRCSYRPIIEHDGLPKQQFHNEELMRWLFRHSFPALPTPRSILFYIKKNKPPV 544
ER RRCSYRPII+HDG P+Q+ N
Sbjct: 494 HDVSERNRRCSYRPIIDHDGRPRQRSLN-------------------------------- 553
Query: 545 AINDEAAAGQLLNVQLLMMFPVCLVFKKQDTNKTKTREELLAEERDYKRRRMSYRGKKAK 604
QD +K KTREELLAEERDYKRRRMSYRGKK K
Sbjct: 554 ----------------------------QDMDKMKTREELLAEERDYKRRRMSYRGKKVK 613
Query: 605 RSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEEGGIKSEQPTDHNITRNIIADGHTKGSN 664
R+ QV D+IEEY EEI AGGIGCF KG ++S P
Sbjct: 614 RTPRQVLHDMIEEYTEEIKLAGGIGCFEKGMP---LQSRSPI------------------ 673
Query: 665 DSYGDAIHSSSHSKKQSNYDSSYLGSQKPQKG-HYGHYGCPEDERKSSSKDKYDRDHYHR 724
+ +K+S++ S + K KG + P D R++S K K +
Sbjct: 674 ----------GNDQKESDFGYSIPSTDKQWKGENRADIEYPIDNRQNSDKVK----RHDE 712
Query: 725 FSDQSSSPSQSHKWKRYPSDRDDEV--LAETRHHE--------TRKLSSSSSNFHGFRSS 784
+ SS QSH+ ++ RDD++ + +H++ T++ S ++ +RSS
Sbjct: 734 YDSGSSQRQQSHRSYKHSDRRDDKLRDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSS 712
Query: 785 SSSRSGGGSSARKDGHKLRASDSRKRNMADNHSSEHLVFNSFNDRYTPSE 794
S + R D + R+ R +N+ F DRY P+E
Sbjct: 794 REKSSSDYKTKRDDPYDRRSQQPRNQNL-------------FEDRYIPTE 712
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879303.1 | 0.0e+00 | 82.65 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_0... | [more] |
TYJ97003.1 | 0.0e+00 | 77.79 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa... | [more] |
XP_008443753.1 | 0.0e+00 | 77.76 | PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo] | [more] |
KAA0038392.1 | 0.0e+00 | 77.67 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa... | [more] |
XP_031743009.1 | 0.0e+00 | 77.55 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativ... | [more] |
Match Name | E-value | Identity | Description | |
Q9M8X2 | 2.3e-111 | 36.96 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BCH1 | 0.0e+00 | 77.79 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. maku... | [more] |
A0A1S3B9I2 | 0.0e+00 | 77.76 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 G... | [more] |
A0A5A7T4I0 | 0.0e+00 | 77.67 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. maku... | [more] |
A0A6J1KU07 | 0.0e+00 | 73.71 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 OS=Cucurbita m... | [more] |
A0A6J1KPX5 | 0.0e+00 | 73.59 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 OS=Cucurbita m... | [more] |
Match Name | E-value | Identity | Description | |
AT3G04160.1 | 1.6e-112 | 36.96 | unknown protein; Has 1711 Blast hits to 1353 proteins in 195 species: Archae - 0... | [more] |
AT3G04160.2 | 4.8e-109 | 36.63 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |