CcUC03G052430 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G052430
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBasic leucine zipper/W2 domain protein
LocationCicolChr03: 17569248 .. 17571279 (-)
RNA-Seq ExpressionCcUC03G052430
SyntenyCcUC03G052430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTGACAACCGTTGCTCGGATGAGAATGAGGGATATGGAGAACATAACCAACTCCGATCAACAACCATCGCACAACCACCAACAAACGTCTTCCACCGATTCATTTCCCGTCACCGATTCGTTTTCCGTCGATGAAGGAGACGTATCACAGGTTTAGAAGCTTTCGCGCCTTTGAAATTCAGCTTAAACTAGTAATTTTTCTTTTCCAATTTAGCACTGGGAATCTGGGTTTTCGTCAAATCTCATTTTCGGTCGACTGTACATAATATGTTTGATAAAATTCCTGAATGGAAGGAACTGCCATATTTTCACTCGTAATGAGCTTGCACTTGCTTTGGATCTTTGATGTGTCAGTTTTAATGAAGTGTTTTATGTTTGCTGCTGCATTTGCCTGGATGTATAAATTAGAAGGGCTGCCTCTTAGTTGAATTTGGTAGGTGATGAATGAGACAGTTCCTTAGGATGGGATTCATGTTTCATTTTCCAACGGCACTTTGTTTTCAGTAACCCTCTTTCTAAAGTTTTGTGGAGATCCTTTCAAAGTCCTTGTTTAGTTTCTTATTGACCTGGTGCTCCACTCCTTCCAATTCTCATAGAAACTTTTGTTGGTCAAATAGTTTTGTGTGGTTTTGAAATTCACTAAGTGGGGTAGTTTTTGTCTAATATTAGAATATGTATCACATAAAAATGTGTGTTGTGAGTAAAAGGCGCAAGCCAAAAATGATAACAAAATGAAAATAAAATAAAATAAAATAAAATAAATCAATGATCTTAACGACGAATGCTAGATTGTTCCATTTAGATTAATTTCAGTCCAATGTTTTCAAAACATCATCTCATTGGTGTTTTATTTTTCCTAAATGAATAGTTTGATCTATAGGAAGTCTTTATTTTGGTATGTTGCTGAGGATGCAAATGTTGATCACTATGAGCACGAGTTGAGGTTGCACAACTTGGCTCTTTTATAAGCCTTAAGATCAAGTTGAATGCCTATATGATTATGTTCCTCCTTTGCTTGGTGACGAAACTCCAGGAGAGTAATAAAAAAGCTCTAATAGGTTGGAACCAGAATTATTACGTTCATGAAATGTCTGATATTTTACGTACAGATTGCAATGGATTTGATGGTATGCACATATCGAACTTATATTTTACGATGTTCTTGAGTAGGATCTGTCTTCTTAACAACAAATTCGCGTCCTACATTCTTTTGTATGTTAAACACAAAACTGTTGTCTTGTGTAATTACTGCAAATGATAGCATGTTGAAAGGCATTGATGCCTTTTGGCTTATATGCAACGGATTCATCATCCACGAGAATTCAAAAGTTGAAAAGACAATAGGAATGACAAGCAATGCTTATATGTACCACATATTCTCGAAGGATTAACTTGTATAATCATTTGATGTTGTTTACCAGATATGTTGGTATAATCAACATTCATTTAATTTTATGTTGGTTTGGGATGAATTTCCAGAATGTTGTCTCGCTGAGCATTCCACCCATGTAGAAATATGTTGGAGAGGTTTATTAAAACATTACTGTCAATTGAACTTTCTGCTTTTGTAGTTAACTGATGATTGATAGAGTTGGAAACGCGGATGTTATACTGGCTTAAGAAACTTTGACCATCAATTAGGGATTTAATTGTATAGTAATTGTGTGTTTACAGAAACAAAATACTATTCTTAGTTGTCTACCAACAACTTGAAATGAATAATGTGCATGAGACTGAAGTTGTTATACAGTTGACTGATAGATGTTACATTCACCCTTTAGGAGTAGTGGACGACATCTTAGTTCAGCTTAAAATTTTGTTGATCATCTAAAGTATGCGAGTACTTAGGCGGTCTCGTTGCATTGACTGTTATAATGCGTAAGGAGCTGTCATCTGAACAAGAAGAAAATTTGGTTCAAACATTGAAAGGAGTACAAGTTGGCCATCAAGTGAATATTGGTTGA

mRNA sequence

ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTGACAACCGTTGCTCGGATGAGAATGAGGGATATGGAGAACATAACCAACTCCGATCAACAACCATCGCACAACCACCAACAAACGTCTTCCACCGATTCATTTCCCGTCACCGATTCGTTTTCCGTCGATGAAGGAGACGTATCACAGGAGAGTAATAAAAAAGCTCTAATAGGTTGGAACCAGAATTATTACGTTCATGAAATGTCTGATATTTTACGTACAGATTGCAATGGATTTGATGGCGGTCTCGTTGCATTGACTGTTATAATGCGTAAGGAGCTGTCATCTGAACAAGAAGAAAATTTGGTTCAAACATTGAAAGGAGTACAAGTTGGCCATCAAGTGAATATTGGTTGA

Coding sequence (CDS)

ATGGTGAGAGAGAAGAGCCCTGGCTTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTGACAACCGTTGCTCGGATGAGAATGAGGGATATGGAGAACATAACCAACTCCGATCAACAACCATCGCACAACCACCAACAAACGTCTTCCACCGATTCATTTCCCGTCACCGATTCGTTTTCCGTCGATGAAGGAGACGTATCACAGGAGAGTAATAAAAAAGCTCTAATAGGTTGGAACCAGAATTATTACGTTCATGAAATGTCTGATATTTTACGTACAGATTGCAATGGATTTGATGGCGGTCTCGTTGCATTGACTGTTATAATGCGTAAGGAGCTGTCATCTGAACAAGAAGAAAATTTGGTTCAAACATTGAAAGGAGTACAAGTTGGCCATCAAGTGAATATTGGTTGA

Protein sequence

MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPVTDSFSVDEGDVSQESNKKALIGWNQNYYVHEMSDILRTDCNGFDGGLVALTVIMRKELSSEQEENLVQTLKGVQVGHQVNIG
Homology
BLAST of CcUC03G052430 vs. NCBI nr
Match: XP_038878707.1 (uncharacterized protein LOC120070883 [Benincasa hispida])

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-26
Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPV 60
          M REKSPGLKILWVWTLGTAAIL+T+VARMRMRDMENI NSDQQPS +HQQTSSTDSFP+
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILITSVARMRMRDMENIINSDQQPSLHHQQTSSTDSFPI 60

Query: 61 TDSFSVDEGDVSQ 74
          TDSFSVDEGD SQ
Sbjct: 61 TDSFSVDEGDASQ 73

BLAST of CcUC03G052430 vs. NCBI nr
Match: KAA0038255.1 (hypothetical protein E6C27_scaffold270G001040 [Cucumis melo var. makuwa] >TYK30654.1 hypothetical protein E5676_scaffold84664G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-23
Identity = 66/114 (57.89%), Postives = 81/114 (71.05%), Query Frame = 0

Query: 1   MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
           MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQPS +HQQTSSTDSF
Sbjct: 1   MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQTSSTDSF 60

Query: 61  PVTDSFSVDEGDVSQESNKKALIGWNQNYYVHEMSDILRTDCNGFDGGLVALTV 113
           P+ DSFSVD+ D SQES   +   +   Y +  +  +   +C+ F    +A+ +
Sbjct: 61  PIPDSFSVDDADKSQESGFSSNPIFGGVYIICLIEFLNGKNCHNFSCSEIAIAL 114

BLAST of CcUC03G052430 vs. NCBI nr
Match: XP_008443690.1 (PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-22
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQPS +HQQTSSTDSF
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQTSSTDSF 60

Query: 61 PVTDSFSVDEGDVSQ 74
          P+ DSFSVD+ D SQ
Sbjct: 61 PIPDSFSVDDADKSQ 75

BLAST of CcUC03G052430 vs. NCBI nr
Match: XP_022987500.1 (uncharacterized protein LOC111485045 [Cucurbita maxima] >KAG7023767.1 hypothetical protein SDJN02_14793, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-20
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPV 60
          M R+KSPG+KILWVWTLGTAAILVT+VAR RMRDMEN+ NSDQQPS +HQQTSS      
Sbjct: 1  MARQKSPGVKILWVWTLGTAAILVTSVARRRMRDMENMINSDQQPSLHHQQTSS------ 60

Query: 61 TDSFSVDEGDVSQ 74
          TDSFSVDEGDVSQ
Sbjct: 61 TDSFSVDEGDVSQ 67

BLAST of CcUC03G052430 vs. NCBI nr
Match: XP_023516467.1 (uncharacterized protein LOC111780326 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 107.5 bits (267), Expect = 9.9e-20
Identity = 57/73 (78.08%), Postives = 62/73 (84.93%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPV 60
          M R+KSPG+KILWVWTLGTAAILVT+VAR RMRDMEN+ NSDQQPS +HQQTSS      
Sbjct: 1  MARQKSPGVKILWVWTLGTAAILVTSVARRRMRDMENMINSDQQPSLHHQQTSS------ 60

Query: 61 TDSFSVDEGDVSQ 74
          TDSFSVDEGD SQ
Sbjct: 61 TDSFSVDEGDASQ 67

BLAST of CcUC03G052430 vs. ExPASy TrEMBL
Match: A0A5D3E426 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00800 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 7.2e-24
Identity = 66/114 (57.89%), Postives = 81/114 (71.05%), Query Frame = 0

Query: 1   MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
           MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQPS +HQQTSSTDSF
Sbjct: 1   MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQTSSTDSF 60

Query: 61  PVTDSFSVDEGDVSQESNKKALIGWNQNYYVHEMSDILRTDCNGFDGGLVALTV 113
           P+ DSFSVD+ D SQES   +   +   Y +  +  +   +C+ F    +A+ +
Sbjct: 61  PIPDSFSVDDADKSQESGFSSNPIFGGVYIICLIEFLNGKNCHNFSCSEIAIAL 114

BLAST of CcUC03G052430 vs. ExPASy TrEMBL
Match: A0A1S3B9D1 (uncharacterized protein LOC103487223 OS=Cucumis melo OX=3656 GN=LOC103487223 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-22
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQPS +HQQTSSTDSF
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTINFNSDQQPSLHHQQTSSTDSF 60

Query: 61 PVTDSFSVDEGDVSQ 74
          P+ DSFSVD+ D SQ
Sbjct: 61 PIPDSFSVDDADKSQ 75

BLAST of CcUC03G052430 vs. ExPASy TrEMBL
Match: A0A6J1JH17 (uncharacterized protein LOC111485045 OS=Cucurbita maxima OX=3661 GN=LOC111485045 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPV 60
          M R+KSPG+KILWVWTLGTAAILVT+VAR RMRDMEN+ NSDQQPS +HQQTSS      
Sbjct: 1  MARQKSPGVKILWVWTLGTAAILVTSVARRRMRDMENMINSDQQPSLHHQQTSS------ 60

Query: 61 TDSFSVDEGDVSQ 74
          TDSFSVDEGDVSQ
Sbjct: 61 TDSFSVDEGDVSQ 67

BLAST of CcUC03G052430 vs. ExPASy TrEMBL
Match: A0A0A0LY21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G656450 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-16
Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENIT--NSDQQPSHNHQQTSSTDSF 60
          MVREKSPGLKILWVWTLGTAAIL T+V RMR+RDMEN    NSDQQ S +HQQTSS    
Sbjct: 1  MVREKSPGLKILWVWTLGTAAILATSVVRMRLRDMENTVNFNSDQQQSLHHQQTSS---- 60

Query: 61 PVTDSFSVDEGDVSQ 74
            TDSFS+D+ D SQ
Sbjct: 61 --TDSFSLDDADKSQ 69

BLAST of CcUC03G052430 vs. ExPASy TrEMBL
Match: A0A6J1EZE2 (uncharacterized protein LOC111440489 OS=Cucurbita moschata OX=3662 GN=LOC111440489 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15
Identity = 50/73 (68.49%), Postives = 56/73 (76.71%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQQPSHNHQQTSSTDSFPV 60
          M REKSPGLKILWVWTLGTAAILVT+VARMRMRDME+I  SDQQ    HQQ  ++     
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQQSMHQQRQTSS---- 60

Query: 61 TDSFSVDEGDVSQ 74
          TDSF V EG+ S+
Sbjct: 61 TDSFFVGEGETSE 69

BLAST of CcUC03G052430 vs. TAIR 10
Match: AT1G06010.1 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 3.6e-12
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0

Query: 1  MVREKSPGLKILWVWTLGTAAILVTTVARMRMRDMENITNSDQ-QPSHNHQQTSSTDSFP 60
          M REKSPGLKILWVWT+GTAAILVT+V R RM+DM+ + N +Q Q    +Q  S+ DS  
Sbjct: 1  MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQAPKENQNGSAGDSSV 60

Query: 61 VTDSFSVDEGD 71
          + D   + E D
Sbjct: 61 LMDETVLPESD 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878707.11.1e-2689.04uncharacterized protein LOC120070883 [Benincasa hispida][more]
KAA0038255.11.5e-2357.89hypothetical protein E6C27_scaffold270G001040 [Cucumis melo var. makuwa] >TYK306... [more]
XP_008443690.16.2e-2280.00PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo][more]
XP_022987500.13.4e-2079.45uncharacterized protein LOC111485045 [Cucurbita maxima] >KAG7023767.1 hypothetic... [more]
XP_023516467.19.9e-2078.08uncharacterized protein LOC111780326 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E4267.2e-2457.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B9D13.0e-2280.00uncharacterized protein LOC103487223 OS=Cucumis melo OX=3656 GN=LOC103487223 PE=... [more]
A0A6J1JH171.6e-2079.45uncharacterized protein LOC111485045 OS=Cucurbita maxima OX=3661 GN=LOC111485045... [more]
A0A0A0LY211.9e-1672.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G656450 PE=4 SV=1[more]
A0A6J1EZE22.7e-1568.49uncharacterized protein LOC111440489 OS=Cucurbita moschata OX=3662 GN=LOC1114404... [more]
Match NameE-valueIdentityDescription
AT1G06010.13.6e-1254.93unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G052430.1CcUC03G052430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane