CcUC03G052070 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G052070
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein of unknown function (DUF1138)
Location	CicolChr03: 15869086 .. 15870262 (+)
RNA-Seq Expression	CcUC03G052070
Synteny	CcUC03G052070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTATAGGAGTCCTCATGGTTTGCTTGAGATGGCTAATAAGGATTTGCAAGAAAAGGCACCTCCTGGAACTTATCTGGTTAATGTAAAGGAACCACTAGGCAATGATATCCTTTCACTAAAAAATTCAGGTAATCATATGATTAATTTGGATATATATTTCTAAAAGAAATTTGGACACACTGATGTATCCAGACGCAGGACACACAAACACTTCAACTCGAAATTTAAATAAACACATTTAATTCGAGCCTTTACAATGCTTACTGCTGAACCCATTGCTTGGTAAAACCAAACCCTGAAACTTCACCTGGCCCTAAAAAACCGTTGAAAGGCAAAAAGAAACCACACACAGACATTTATTTCTCCCCCATGAGTGCATATCACGATGTTAAATTTACATGTCAATAGATGCATATATATTTCAAAGTTCATATTTTCAACTTGTTCGTGTCCTACTTTTCTGTTGTAGTTTGTGTTTGTGGTCCTCTTCATCTTTGTGCACGTGTCTGTCTGTGTTCAAGTCCACATTAGGATACTAGCTTTTGGTTCAATATGGGTGCAGTTTGATGTAATTCTGTTATAGTGTGGTTCAATTGATTTGGGAACATATTAGTCCATTGCAGTTTGAAGATGGCAGCAAAATACATAGTAGGTTCTTTGCTTGGAGCAACTGCAGTTGCGTATATTTCTGACCATCTTGTTGCTGACAAGAAAATATTTGGAGGTAATTACCAATCATCATTTAGTTTTGCTGTTTCTTTGATGTGCTACAATTGCTCTATTGTCCTGATTTCTCATTCCTTTTAATGGATTTTGTTCAGGAACAACCCCAAGTACTGTTTCAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCCTCGTCAAAACCCGCCCTGAAGCATAAATATTACTCTGGTTGTCAGTTTTTACACTTGTGATTGGATCATTCTGCTTTTGGAAGTACATCCTAGTCTAGCAGTTCTAATCTGCCTCACATTTTGAGTGGTGAACTTGACGGATTTCTTGTTTGTTGTTCTGATGGCCATTCTTATTTCCTGTTTAAGTTGCATCACTGGCTTGTTATGTTGATGGTGACAGGATGTTGA

mRNA sequence

ATGGCCTATAGGAGTCCTCATGGTTTGCTTGAGATGGCTAATAAGGATTTGCAAGAAAAGGCACCTCCTGGAACTTATCTGGTTAATAAGATGGCAGCAAAATACATAGTAGGTTCTTTGCTTGGAGCAACTGCAGTTGCGTATATTTCTGACCATCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCCTCTCTAGCAGTTCTAATCTGCCTCACATTTTGAGTGGATGTTGA

Coding sequence (CDS)

ATGGCCTATAGGAGTCCTCATGGTTTGCTTGAGATGGCTAATAAGGATTTGCAAGAAAAGGCACCTCCTGGAACTTATCTGGTTAATAAGATGGCAGCAAAATACATAGTAGGTTCTTTGCTTGGAGCAACTGCAGTTGCGTATATTTCTGACCATCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCAGTGGTCATGAACCCCATCAGTCGCCAGAATTTCCTCTCTAGCAGTTCTAATCTGCCTCACATTTTGAGTGGATGTTGA

Protein sequence

MAYRSPHGLLEMANKDLQEKAPPGTYLVNKMAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFLSSSSNLPHILSGC

Homology

[Close]

BLAST of CcUC03G052070 vs. NCBI nr
Match: XP_008467091.1 (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo] >KAA0043508.1 uncharacterized protein E6C27_scaffold335G00010 [Cucumis melo var. makuwa] >KAA0056128.1 uncharacterized protein E6C27_scaffold697G00060 [Cucumis melo var. makuwa] >TYK02516.1 uncharacterized protein E5676_scaffold784G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKYIVGSLLGATAVAYI DHL++DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFLSSS 107
           PVVMNPISRQNF+  S
Sbjct: 61  PVVMNPISRQNFIVKS 76

[Close]

BLAST of CcUC03G052070 vs. NCBI nr
Match: XP_038883759.1 (uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 uncharacterized protein LOC120074644 [Benincasa hispida])

HSP 1 Score: 149.1 bits (375), Expect = 2.4e-32
Identity = 69/73 (94.52%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKYIVGSLLGATA+AYISDHL+ADKKIFGGTTPSTVSN EWWEETDKKFQAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGATALAYISDHLIADKKIFGGTTPSTVSNREWWEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFL 104
           PVVMNPISRQNF+
Sbjct: 61  PVVMNPISRQNFI 73

[Close]

BLAST of CcUC03G052070 vs. NCBI nr
Match: XP_038876294.1 (uncharacterized protein LOC120068549 [Benincasa hispida])

HSP 1 Score: 141.0 bits (354), Expect = 6.6e-30
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKYIVGSLLGATA AYISD L+ADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGATAFAYISD-LIADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFL 104
           PVV+NPISRQNF+
Sbjct: 61  PVVVNPISRQNFI 72

[Close]

BLAST of CcUC03G052070 vs. NCBI nr
Match: XP_004149394.1 (uncharacterized protein LOC101213065 [Cucumis sativus] >XP_011653428.1 uncharacterized protein LOC101213065 [Cucumis sativus] >XP_011653429.1 uncharacterized protein LOC101213065 [Cucumis sativus] >XP_031739913.1 uncharacterized protein LOC101213065 [Cucumis sativus] >KGN53849.1 hypothetical protein Csa_019165 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-29
Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKYIVGSLLGA  VAYI DHL++DKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFL 104
           PVVMNPISRQNF+
Sbjct: 61  PVVMNPISRQNFI 73

[Close]

BLAST of CcUC03G052070 vs. NCBI nr
Match: KAF7144776.1 (hypothetical protein RHSIM_Rhsim04G0102100 [Rhododendron simsii])

HSP 1 Score: 138.7 bits (348), Expect = 3.3e-29
Identity = 64/85 (75.29%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 23  PGTYLVNKMAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQ 82
           P T L   M+ KYI+GSLLG   VAY+ DH +ADKKIFGGTTP TVSN EWWE TDKKFQ
Sbjct: 23  PVTCLRPNMSGKYIIGSLLGTCVVAYVVDHFIADKKIFGGTTPGTVSNKEWWEATDKKFQ 82

Query: 83  AWPRTAGPPVVMNPISRQNFLSSSS 108
           AWPRTAGPPVVMNPISRQNF+  SS
Sbjct: 83  AWPRTAGPPVVMNPISRQNFIVKSS 107

[Close]

BLAST of CcUC03G052070 vs. ExPASy TrEMBL
Match: A0A5A7UM13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00430 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.9e-33
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKYIVGSLLGATAVAYI DHL++DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFLSSS 107
           PVVMNPISRQNF+  S
Sbjct: 61  PVVMNPISRQNFIVKS 76

[Close]

BLAST of CcUC03G052070 vs. ExPASy TrEMBL
Match: A0A1S3CSQ7 (uncharacterized protein LOC103504527 OS=Cucumis melo OX=3656 GN=LOC103504527 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.9e-33
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKYIVGSLLGATAVAYI DHL++DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFLSSS 107
           PVVMNPISRQNF+  S
Sbjct: 61  PVVMNPISRQNFIVKS 76

[Close]

BLAST of CcUC03G052070 vs. ExPASy TrEMBL
Match: A0A0A0KYC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166930 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.5e-30
Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKYIVGSLLGA  VAYI DHL++DKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFL 104
           PVVMNPISRQNF+
Sbjct: 61  PVVMNPISRQNFI 73

[Close]

BLAST of CcUC03G052070 vs. ExPASy TrEMBL
Match: A0A6J1HPI7 (uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.7e-29
Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 31  MAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 90
           MAAKY+  SL+G  A+AYI+D+LV+DKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP
Sbjct: 1   MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 91  PVVMNPISRQNFL 104
           PVVMNPISRQNF+
Sbjct: 61  PVVMNPISRQNFI 73

[Close]

BLAST of CcUC03G052070 vs. ExPASy TrEMBL
Match: A0A6P5YTE5 (uncharacterized protein LOC111294408 isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111294408 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.5e-29
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 18  QEKAPPGTYLVNKMAAKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEET 77
           Q    PG+    KMAAKYI+ S+LG+ A+AY+SD LVA+KKIFGGTTP TVSN EWWEET
Sbjct: 39  QRPGKPGSL---KMAAKYIIVSILGSFAIAYVSDQLVAEKKIFGGTTPHTVSNKEWWEET 98

Query: 78  DKKFQAWPRTAGPPVVMNPISRQNFL 104
           DKKFQAWPRTAGPPVVMNPISRQNF+
Sbjct: 99  DKKFQAWPRTAGPPVVMNPISRQNFV 121

[Close]

BLAST of CcUC03G052070 vs. TAIR 10
Match: AT1G01170.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-27
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 33  AKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPV 92
           AKYI+G+L+G+  ++YI D +++D KIFGGTTP TVSN EWW  TD+KFQAWPRTAGPPV
Sbjct: 7   AKYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPV 66

Query: 93  VMNPISRQNFL 104
           VMNPISRQNF+
Sbjct: 67  VMNPISRQNFI 77

[Close]

BLAST of CcUC03G052070 vs. TAIR 10
Match: AT1G01170.2 (Protein of unknown function (DUF1138) )

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-27
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 33  AKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPV 92
           AKYI+G+L+G+  ++YI D +++D KIFGGTTP TVSN EWW  TD+KFQAWPRTAGPPV
Sbjct: 7   AKYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPV 66

Query: 93  VMNPISRQNFL 104
           VMNPISRQNF+
Sbjct: 67  VMNPISRQNFI 77

[Close]

BLAST of CcUC03G052070 vs. TAIR 10
Match: AT4G00860.1 (Protein of unknown function (DUF1138) )

HSP 1 Score: 105.1 bits (261), Expect = 3.7e-23
Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 33  AKYIVGSLLGATAVAYISDHLVADKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPV 92
           A YI+G+L G+  VAY+ D +++D K+FGGTTP T++N EW   T+++ QAWPR AGPPV
Sbjct: 4   ATYIIGALAGSAVVAYVCDKVISDDKLFGGTTPGTITNKEWGAATEERLQAWPRVAGPPV 63

Query: 93  VMNPISRQNFLSSS 107
           VMNPISRQNF+  S
Sbjct: 64  VMNPISRQNFIVKS 77

The following BLAST results are available for this feature:

BLAST of CcUC03G052070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467091.1	1.4e-32	92.11	PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo] >KAA0043508.1 unc...	[more]
XP_038883759.1	2.4e-32	94.52	uncharacterized protein LOC120074644 [Benincasa hispida] >XP_038883760.1 unchara...	[more]
XP_038876294.1	6.6e-30	93.15	uncharacterized protein LOC120068549 [Benincasa hispida]	[more]
XP_004149394.1	1.1e-29	90.41	uncharacterized protein LOC101213065 [Cucumis sativus] >XP_011653428.1 uncharact...	[more]
KAF7144776.1	3.3e-29	75.29	hypothetical protein RHSIM_Rhsim04G0102100 [Rhododendron simsii]	[more]

BLAST of CcUC03G052070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC03G052070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UM13	6.9e-33	92.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CSQ7	6.9e-33	92.11	uncharacterized protein LOC103504527 OS=Cucumis melo OX=3656 GN=LOC103504527 PE=...	[more]
A0A0A0KYC7	5.5e-30	90.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166930 PE=4 SV=1	[more]
A0A6J1HPI7	2.7e-29	84.93	uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138...	[more]
A0A6P5YTE5	3.5e-29	75.58	uncharacterized protein LOC111294408 isoform X1 OS=Durio zibethinus OX=66656 GN=...	[more]

BLAST of CcUC03G052070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01170.1	1.1e-27	71.83	Protein of unknown function (DUF1138)	[more]
AT1G01170.2	1.1e-27	71.83	Protein of unknown function (DUF1138)	[more]
AT4G00860.1	3.7e-23	59.46	Protein of unknown function (DUF1138)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009515	Protein of unknown function DUF1138	PFAM	PF06592	DUF1138	coord: 33..103 e-value: 3.2E-41 score: 139.2
IPR009515	Protein of unknown function DUF1138	PANTHER	PTHR34267	OS11G0161033 PROTEIN	coord: 31..106
None	No IPR available	PANTHER	PTHR34267:SF1	OS11G0161033 PROTEIN	coord: 31..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G052070.1	CcUC03G052070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane