CcUC03G051850 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G051850
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Translocase subunit seca
Location	CicolChr03: 13528017 .. 13529696 (+)
RNA-Seq Expression	CcUC03G051850
Synteny	CcUC03G051850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAGAGAGGAAATCTCTCCATCTCTCTCTCTATATCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCCATTCTCTCTCTCTTCCCTTTTCATTTTATTTTCCAATTAACAAATCCGATTCCCTGTCTCTTTGTCCCTTCTCTTATGTTCTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGTATAATCTCTCTGCTATCACTTTTCTTTTCTTTGTTTTTTCTTCCTCTTTCATTCTAACTTCCAGCCTCTTTCACTTCCAACTTTCAATTTACAGATCTAAGTATTTACAGGATTGTGTTTTTAGCTTAGATGTTAAGCAAGAACTAAATTTTTTAGAGAGATTTAAGTTGTTTTTTAACTACCATATGCTTCTGCTATAACTATTGTGAATTGGGTTTCCTTTTCCTGTTTGTTTACAAGATTTGTTTGTCTTGTCTGTACAGCCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCGTGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCATCGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTTGATCTCCTCTTCTTTAAGGTACATAATTTTTGCTTTTAATTATTGAAATTTAATCGATTTCATCCCATAAAAGAAGATGTTTCTTTTTCAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGACGAGAAGCCAAAGCTGCTCCCTCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAGAAACCCGATCCAAGTGGAGCTGAGCCGAGCCGATTGAGCAATGATGATGAAGAAGAAAACAAACACATGGATTTTTATTTTTTTTCCCTACAATTTTAAATTAAATATTTAAAGTAAAATTTTGAAAAGAAAAAGAACTTTTTTGACCAAAACACCATTATTGTAAATAATGTGAAAAAGAAATCCAAGTAAATATTATGTTAAAAGAAAAGCGGGGGAGGGGCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGGTTGAGAGTCCTTGTTTGACCAATTGAAGAATAAAAGGCAGAAGGAGAGAGAGATTATTCATAGGTTTTTGTGAATTGAGAGAATTAATTTGCCCTCTCTCTTTATCTTCTCTATTTTGTAATATATGTAAGTGTTTTTCTTTTATCTTTTATCTTTTTTCTTTAGGAGAGTCCAAGAGACCAAGATTGTTTCTTTGTGTAATTCAAGGGCAAACTTTTTGTTGCAGCTTGAGAATGAAAAAACATGTACAAATTGAAGCTGCATAAATTTAATATCAATCAAGTAAAACTTTATTTTGTCTTATAGACTTTTCCTTCTCTCTTTTGGG

mRNA sequence

AATAGAGAGGAAATCTCTCCATCTCTCTCTCTATATCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCCATTCTCTCTCTCTTCCCTTTTCATTTTATTTTCCAATTAACAAATCCGATTCCCTGTCTCTTTGTCCCTTCTCTTATGTTCTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGCCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCGTGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCATCGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTTGATCTCCTCTTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGACGAGAAGCCAAAGCTGCTCCCTCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAGAAACCCGATCCAAGTGGAGCTGAGCCGAGCCGATTGAGCAATGATGATGAAGAAGAAAACAAACACATGGATTTTTATTTTTTTTCCCTACAATTTTAAATTAAATATTTAAAGTAAAATTTTGAAAAGAAAAAGAACTTTTTTGACCAAAACACCATTATTGTAAATAATGTGAAAAAGAAATCCAAGTAAATATTATGTTAAAAGAAAAGCGGGGGAGGGGCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGGTTGAGAGTCCTTGTTTGACCAATTGAAGAATAAAAGGCAGAAGGAGAGAGAGATTATTCATAGGTTTTTGTGAATTGAGAGAATTAATTTGCCCTCTCTCTTTATCTTCTCTATTTTGTAATATATGTAAGTGTTTTTCTTTTATCTTTTATCTTTTTTCTTTAGGAGAGTCCAAGAGACCAAGATTGTTTCTTTGTGTAATTCAAGGGCAAACTTTTTGTTGCAGCTTGAGAATGAAAAAACATGTACAAATTGAAGCTGCATAAATTTAATATCAATCAAGTAAAACTTTATTTTGTCTTATAGACTTTTCCTTCTCTCTTTTGGG

Coding sequence (CDS)

ATGAATTGGCTTTGTGAAGAGATGATGAGCGCCGCCGCGGCCGACCGCCGTGAGCGAGTGGTTTGCCCAAAACCCCGCCGTCTCGGTCTTATGAATAATACCGGCATCGACAACCCATTTAGACACTCTTTTGATTCAGATGCTCTTGATCTCCTCTTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACCGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCGTTAATCCAAGACGCTAGATTTGGGGACGAGAAGCCAAAGCTGCTCCCTCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGCCCTCGGCCGGTCGGAAAGGCGGATGTGTGCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATACCTGCTCTGGCTTAG

Protein sequence

MNWLCEEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGLENFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA

Homology

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BLAST of CcUC03G051850 vs. NCBI nr
Match: XP_038906747.1 (uncharacterized protein LOC120092671 [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 6.6e-81
Identity = 147/159 (92.45%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEMM+  AADRRER+VCPKPRRLGLMN+ G DNPFRH FDSDALDLLFFKGGCGL
Sbjct: 1   MNWVCEEMMT--AADRRERLVCPKPRRLGLMNDAGNDNPFRHRFDSDALDLLFFKGGCGL 60

Query: 61  ENFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN SSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA
Sbjct: 61  ENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           GRKGGCVR+NFGNNPAVRIEGFDCRLDRERRNRS+PALA
Sbjct: 121 GRKGGCVRINFGNNPAVRIEGFDCRLDRERRNRSVPALA 157

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BLAST of CcUC03G051850 vs. NCBI nr
Match: XP_004140334.1 (uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical protein Csa_007795 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 5.8e-77
Identity = 142/159 (89.31%), Postives = 148/159 (93.08%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM + AA DRRER+VCPKPRRLGL+N+T  DNPFRH FDSDALDLLF KGGCGL
Sbjct: 1   MNWVCEEMQT-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL 60

Query: 61  ENFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN S+ QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP SPPPSA
Sbjct: 61  ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           GRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of CcUC03G051850 vs. NCBI nr
Match: XP_008465783.1 (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 141/159 (88.68%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM S AA DRRER+VCPKPRRLGL+N+T  DNPFRH FDSDA+DLLF KGGCGL
Sbjct: 1   MNWVCEEMRS-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGL 60

Query: 61  ENFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           E FN S+TQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSA
Sbjct: 61  EKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of CcUC03G051850 vs. NCBI nr
Match: KAA0047427.1 (uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK04136.1 uncharacterized protein E5676_scaffold2119G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 7.3e-72
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 9   MSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGLENFNRSST 68
           M +AA DRRER+VCPKPRRLGL+N+T  DNPFRH FDSDA+DLLF KGGCGLE FN S+T
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 69  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGRKGGCVR 128
           QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 129 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

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BLAST of CcUC03G051850 vs. NCBI nr
Match: XP_022971782.1 (uncharacterized protein LOC111470460 [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64
Identity = 128/159 (80.50%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 6   EEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDS----DALDLLFFKGGCGLE 65
           EEMM AA  DRRER+VCPKPRRLGL+N T  DNPFRH FDS    DALDLLFFKGGC LE
Sbjct: 15  EEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLE 74

Query: 66  NFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPSSPPPSA 125
           NF  SSTQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPPS 
Sbjct: 75  NFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 126 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CcUC03G051850 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77
Identity = 142/159 (89.31%), Postives = 148/159 (93.08%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM + AA DRRER+VCPKPRRLGL+N+T  DNPFRH FDSDALDLLF KGGCGL
Sbjct: 1   MNWVCEEMQT-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL 60

Query: 61  ENFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           ENFN S+ QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP SPPPSA
Sbjct: 61  ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           GRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of CcUC03G051850 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.3e-76
Identity = 141/159 (88.68%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MNWLCEEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGL 60
           MNW+CEEM S AA DRRER+VCPKPRRLGL+N+T  DNPFRH FDSDA+DLLF KGGCGL
Sbjct: 1   MNWVCEEMRS-AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGL 60

Query: 61  ENFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSA 120
           E FN S+TQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSA
Sbjct: 61  EKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSA 120

Query: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of CcUC03G051850 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.5e-72
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 9   MSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGLENFNRSST 68
           M +AA DRRER+VCPKPRRLGL+N+T  DNPFRH FDSDA+DLLF KGGCGLE FN S+T
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 69  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGRKGGCVR 128
           QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 129 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

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BLAST of CcUC03G051850 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 128/159 (80.50%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 6   EEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDS----DALDLLFFKGGCGLE 65
           EEMM AA  DRRER+VCPKPRRLGL+N T  DNPFRH FDS    DALDLLFFKGGC LE
Sbjct: 15  EEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLE 74

Query: 66  NFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPSSPPPSA 125
           NF  SSTQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPPS 
Sbjct: 75  NFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 126 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CcUC03G051850 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 128/159 (80.50%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 6   EEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDS----DALDLLFFKGGCGLE 65
           EEM  AA  DRRER+VCPKPRRLGL+N T  DNPFRH FDS    DALDLLFFKGGC LE
Sbjct: 15  EEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLE 74

Query: 66  NFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPSSPPPSA 125
           NFN SSTQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPPS 
Sbjct: 75  NFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPST 134

Query: 126 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
            R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 135 DRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of CcUC03G051850 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-32
Identity = 82/156 (52.56%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 20  VVCPKPRRLGLMNN-----TGIDNPFRHSF-------DSDALDLLFFKGGCGLENFNRSS 79
           VVCPKPRR+GL NN       +   F H         ++D LD++  K G G E  N+  
Sbjct: 32  VVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDIILTKDGYGAEQVNK-- 91

Query: 80  TQLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP--AASPPSSPPPSAGRKG 139
            Q+  SP P+ CGSPPSRVANPL QDARF DE   +  +  P     P SSP  S+GRKG
Sbjct: 92  -QVIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKG 151

Query: 140 GC-VRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
           GC VR NFGN+P VR+EGFDC LDR+ RN SIPALA
Sbjct: 152 GCVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

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BLAST of CcUC03G051850 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 7.4e-30
Identity = 84/170 (49.41%), Postives = 99/170 (58.24%), Query Frame = 0


Query: 6   EEMMSAAAADRRERVVCPKPRRLGLMNNTGIDNPFRHSFDSDALDLLFFKGGCGL----- 65
           EEMM     DR++ VVCPKPRR+GL+ N  I  P R      A DL   K G  L     
Sbjct: 81  EEMM---GFDRKDLVVCPKPRRVGLLANNVI-RPLRLHMSQAAADLCDSKAGAELLEIIR 140

Query: 66  --ENFNRSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------PKLLPLFSPAA 125
             E+       L+SSPPYF GSPPSR ANPL QDARF DEK        P L P +S   
Sbjct: 141 RKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQP-YSATG 200

Query: 126 SPPSSPPPSAGRKGGCVRVNFG-NNPAVRIEGFDCRLDRERRNRSIPALA 160
            P  S   S+    GCVR+ FG N+PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 201 FPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

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BLAST of CcUC03G051850 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 6   EEM-MSAAAADRRERVVCPKPRRLGLMN---NTGIDNPFRHSFD-------SDALDLLFF 65
           EEM  +AA +DRR+ V+CPKPRR+G +N   +  +     H  +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNRSSTQLASSPP-YFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP 125
           KGG G     +  T+   +PP +F GSPPSRV+NPL +D+ F +E   LL + SP+ S P
Sbjct: 73  KGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTP 132

Query: 126 SS---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
            +    PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 RATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

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BLAST of CcUC03G051850 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 6   EEM-MSAAAADRRERVVCPKPRRLGLMN---NTGIDNPFRHSFD-------SDALDLLFF 65
           EEM  +AA +DRR+ V+CPKPRR+G +N   +  +     H  +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNRSSTQLASSPP-YFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPP 125
           KGG G     +  T+   +PP +F GSPPSRV+NPL +D+ F +E   LL + SP+ S P
Sbjct: 73  KGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTP 132

Query: 126 SS---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 160
            +    PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 RATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of CcUC03G051850 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-25
Identity = 78/146 (53.42%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 18  ERVVCPKPRRLGLMNNTGIDNPFRHSFD-SDALDLLFFKGGCG-LENFNRSSTQLASSPP 77
           + VVCPKPRR    NN  +  PFR  F  S A D+   K G   L+ F R  +  + SPP
Sbjct: 29  DSVVCPKPRR---ANN--VIRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 78  YFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAGR-KGGCVRVNFGNN 137
           +F GSPPSR ANPL QDARFGDEK   L   SP+ SP     PSA R K GC R+ FG  
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEK---LNTVSPSLSPLL---PSASRVKSGCGRMKFGVK 148

Query: 138 PA-VRIEGFDCRLDRERRNRSIPALA 160
           PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 PATVRVEGFDC-LNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:

BLAST of CcUC03G051850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906747.1	6.6e-81	92.45	uncharacterized protein LOC120092671 [Benincasa hispida]	[more]
XP_004140334.1	5.8e-77	89.31	uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical ...	[more]
XP_008465783.1	1.1e-75	88.68	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 P...	[more]
KAA0047427.1	7.3e-72	88.74	uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_022971782.1	4.3e-64	80.50	uncharacterized protein LOC111470460 [Cucurbita maxima]	[more]

BLAST of CcUC03G051850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC03G051850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRF1	2.8e-77	89.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1	[more]
A0A1S3CR46	5.3e-76	88.68	uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=...	[more]
A0A5D3C147	3.5e-72	88.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1I2X1	2.1e-64	80.50	uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460...	[more]
A0A6J1E6Z2	2.7e-64	80.50	uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]

BLAST of CcUC03G051850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	2.7e-32	52.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16110.1	7.4e-30	49.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	1.9e-25	43.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	1.9e-25	43.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02555.1	2.5e-25	53.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..126
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 8..159
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 8..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G051850.1	CcUC03G051850.1	mRNA