Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCACCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCACCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGTGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAGAGCAGATCCTCGTCTTCGCTCTCTGTCTCTGAAACTACTAACATTATACCTAACAAGTGA
mRNA sequence
ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCACCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCACCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGTGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAGAGCAGATCCTCGTCTTCGCTCTCTGTCTCTGAAACTACTAACATTATACCTAACAAGTGA
Coding sequence (CDS)
ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCACCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCACCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGTGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAGAGCAGATCCTCGTCTTCGCTCTCTGTCTCTGAAACTACTAACATTATACCTAACAAGTGA
Protein sequence
MAIPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAFIYFFKFRKQSKSRSSSSLSVSETTNIIPNK
Homology
BLAST of CcUC03G050460 vs. NCBI nr
Match:
XP_038895122.1 (uncharacterized protein LOC120083432 [Benincasa hispida])
HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70
Identity = 145/150 (96.67%), Postives = 146/150 (97.33%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
IPSFAAVFSSLAVILL GISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD
Sbjct: 8 IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 67
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLPPQWW RSHRNRSGAAADGGGGDHIRGALLVASLVCGIIG+SLLIASAF
Sbjct: 68 VALPKAMNTSLPPQWWNRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGISLLIASAF 127
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IYFFKFRKQ SRSSSSLSVSETTNIIPNK
Sbjct: 128 IYFFKFRKQ--SRSSSSLSVSETTNIIPNK 155
BLAST of CcUC03G050460 vs. NCBI nr
Match:
KAG6583852.1 (hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019473.1 hypothetical protein SDJN02_18434, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 244.2 bits (622), Expect = 7.3e-61
Identity = 130/150 (86.67%), Postives = 137/150 (91.33%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
I + AAV+ S+AVI L G SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7 IAAVAAVYCSVAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLP QWW RSHR+RSGAAADGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67 VALPKAMNTSLPSQWWNRSHRDRSGAAADGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IY FKFRKQ +RSSSSLSVSETTNII NK
Sbjct: 127 IYVFKFRKQ--NRSSSSLSVSETTNIIANK 154
BLAST of CcUC03G050460 vs. NCBI nr
Match:
XP_022927447.1 (uncharacterized protein LOC111434271 [Cucurbita moschata])
HSP 1 Score: 243.8 bits (621), Expect = 9.5e-61
Identity = 129/150 (86.00%), Postives = 137/150 (91.33%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
I + AA++ S+AVI L G SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7 IAAVAAIYCSVAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLP QWW RSHR+RSGAAADGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67 VALPKAMNTSLPSQWWNRSHRDRSGAAADGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IY FKFRKQ +RSSSSLSVSETTNII NK
Sbjct: 127 IYVFKFRKQ--NRSSSSLSVSETTNIIANK 154
BLAST of CcUC03G050460 vs. NCBI nr
Match:
XP_023519911.1 (uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 243.4 bits (620), Expect = 1.2e-60
Identity = 129/150 (86.00%), Postives = 136/150 (90.67%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
I + AA++ SLAVI L G SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7 IAAVAAIYCSLAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLP QWW RSHR+RSGAA DGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67 VALPKAMNTSLPSQWWNRSHRDRSGAAGDGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IY FKFRKQ +RSSSSLSVSETTNII NK
Sbjct: 127 IYVFKFRKQ--NRSSSSLSVSETTNIIANK 154
BLAST of CcUC03G050460 vs. NCBI nr
Match:
XP_023000949.1 (uncharacterized protein LOC111495232 [Cucurbita maxima])
HSP 1 Score: 242.3 bits (617), Expect = 2.8e-60
Identity = 129/150 (86.00%), Postives = 136/150 (90.67%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
I +FAA++ SLAVI L G SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 6 IAAFAAIYCSLAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 65
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLP QWW RSHR+RS AAADGG GDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 66 VALPKAMNTSLPSQWWNRSHRDRSEAAADGGSGDHIRGALLVASLVCGVIGVSLLIASAF 125
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IY FKFRKQ +RSSSSLSVSETTNII NK
Sbjct: 126 IYVFKFRKQ--NRSSSSLSVSETTNIIANK 153
BLAST of CcUC03G050460 vs. ExPASy TrEMBL
Match:
A0A6J1EH69 (uncharacterized protein LOC111434271 OS=Cucurbita moschata OX=3662 GN=LOC111434271 PE=4 SV=1)
HSP 1 Score: 243.8 bits (621), Expect = 4.6e-61
Identity = 129/150 (86.00%), Postives = 137/150 (91.33%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
I + AA++ S+AVI L G SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7 IAAVAAIYCSVAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLP QWW RSHR+RSGAAADGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67 VALPKAMNTSLPSQWWNRSHRDRSGAAADGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IY FKFRKQ +RSSSSLSVSETTNII NK
Sbjct: 127 IYVFKFRKQ--NRSSSSLSVSETTNIIANK 154
BLAST of CcUC03G050460 vs. ExPASy TrEMBL
Match:
A0A6J1KLE3 (uncharacterized protein LOC111495232 OS=Cucurbita maxima OX=3661 GN=LOC111495232 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 129/150 (86.00%), Postives = 136/150 (90.67%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
I +FAA++ SLAVI L G SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 6 IAAFAAIYCSLAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 65
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLP QWW RSHR+RS AAADGG GDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 66 VALPKAMNTSLPSQWWNRSHRDRSEAAADGGSGDHIRGALLVASLVCGVIGVSLLIASAF 125
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IY FKFRKQ +RSSSSLSVSETTNII NK
Sbjct: 126 IYVFKFRKQ--NRSSSSLSVSETTNIIANK 153
BLAST of CcUC03G050460 vs. ExPASy TrEMBL
Match:
A0A5D3C2L6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00520 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 7.3e-59
Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 0
Query: 3 IPSFAAVFSSLA--VILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSS 62
IPSFA ++SSLA ++LL +SNARDLRPSEHGL+YQNP A++NSSPQMQSFFKGNSWS+
Sbjct: 8 IPSFAVLYSSLALIILLLAPLSNARDLRPSEHGLDYQNPDAIQNSSPQMQSFFKGNSWSN 67
Query: 63 SDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIAS 122
SDVALPKAMNTSLPPQWW RSHRNRSGA+A GGDHIRGALLVASLVCGIIGVSLL+AS
Sbjct: 68 SDVALPKAMNTSLPPQWWNRSHRNRSGASA--AGGDHIRGALLVASLVCGIIGVSLLVAS 127
Query: 123 AFIYFFKFRKQSK-SRSSSSLSVSETTNIIPNK 153
AFIYFFKFRKQS+ S SSSSLS SETTNII NK
Sbjct: 128 AFIYFFKFRKQSRSSSSSSSLSASETTNIIANK 158
BLAST of CcUC03G050460 vs. ExPASy TrEMBL
Match:
A0A1S3BC63 (uncharacterized protein LOC103488324 OS=Cucumis melo OX=3656 GN=LOC103488324 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 7.3e-59
Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 0
Query: 3 IPSFAAVFSSLA--VILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSS 62
IPSFA ++SSLA ++LL +SNARDLRPSEHGL+YQNP A++NSSPQMQSFFKGNSWS+
Sbjct: 8 IPSFAVLYSSLALIILLLAPLSNARDLRPSEHGLDYQNPDAIQNSSPQMQSFFKGNSWSN 67
Query: 63 SDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIAS 122
SDVALPKAMNTSLPPQWW RSHRNRSGA+A GGDHIRGALLVASLVCGIIGVSLL+AS
Sbjct: 68 SDVALPKAMNTSLPPQWWNRSHRNRSGASA--AGGDHIRGALLVASLVCGIIGVSLLVAS 127
Query: 123 AFIYFFKFRKQSK-SRSSSSLSVSETTNIIPNK 153
AFIYFFKFRKQS+ S SSSSLS SETTNII NK
Sbjct: 128 AFIYFFKFRKQSRSSSSSSSLSASETTNIIANK 158
BLAST of CcUC03G050460 vs. ExPASy TrEMBL
Match:
A0A0A0LVV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538210 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 1.0e-52
Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 0
Query: 3 IPSFAAVFSSLAVILLTGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
IPS AA ++LL +SNARDLRPSEHGL+YQNP A+ +SSPQMQSFF+GNSWS+SD
Sbjct: 8 IPSIAAAL----ILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSD 67
Query: 63 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
VALPKAMNTSLPPQW R+HRNRSGA+A GDHIRGALLVASLVCGIIGVSLL+ASAF
Sbjct: 68 VALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRGALLVASLVCGIIGVSLLVASAF 127
Query: 123 IYFFKFRKQSKSRSSSSLSVSETTNIIPNK 153
IYFFKFRKQS+S SSSS+SVSETTNII NK
Sbjct: 128 IYFFKFRKQSRS-SSSSVSVSETTNIIANK 150
BLAST of CcUC03G050460 vs. TAIR 10
Match:
AT4G21740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 68.2 bits (165), Expect = 6.6e-12
Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 0
Query: 15 VILLTGISNARDLRPSEHGLEYQ--NPGAMENSSP-QMQSFFKGNSWSSS-----DVALP 74
+++ TG S A +LRPS+HGL+YQ +P +S P +M+SFF G+S SSS LP
Sbjct: 23 LVIFTGNSLAGELRPSDHGLQYQFSSPPTESHSPPGKMKSFF-GDSHSSSPPPSHPQLLP 82
Query: 75 K--AMNTSLPPQWWTRSHRNRSGAAADGGGGDHI-RGALLVASLVCGIIGVSLLIASAFI 134
K A + WW R GA G DH+ R L AS++CG+ GV+LL+ I
Sbjct: 83 KATAADGGDDDSWW------RDGA---GIRRDHVMRHVFLAASIICGVSGVALLVVFTLI 142
Query: 135 YFFKFRKQSKSRS 137
YFF++RK + S S
Sbjct: 143 YFFRYRKHNHSNS 145
BLAST of CcUC03G050460 vs. TAIR 10
Match:
AT1G30515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 61.2 bits (147), Expect = 8.1e-10
Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 0
Query: 4 PSFAAVFSSLAVILLTGISNARDLRPSEHGLE-YQNPGAMENSSPQMQSFFKGNSWSSSD 63
P ++ ++L + I NAR+LRPS+HGLE Y PG S +M SFF SS+D
Sbjct: 10 PPLISMLIMFIIVLESTIINARELRPSDHGLEYYYEPG----ESSEMTSFF--GPPSSND 69
Query: 64 VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 123
+ + ++S+ P + S D +H+ L+V SLVCG+ GV+L++ASA
Sbjct: 70 LTSISSPSSSILPSAVKSPMKTLSKDQDDDRVMNHV---LVVGSLVCGLSGVALMVASAL 129
Query: 124 IYFFKFRKQSKS 135
IYF + K S
Sbjct: 130 IYFLGYPKTQNS 132
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038895122.1 | 2.9e-70 | 96.67 | uncharacterized protein LOC120083432 [Benincasa hispida] | [more] |
KAG6583852.1 | 7.3e-61 | 86.67 | hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022927447.1 | 9.5e-61 | 86.00 | uncharacterized protein LOC111434271 [Cucurbita moschata] | [more] |
XP_023519911.1 | 1.2e-60 | 86.00 | uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo] | [more] |
XP_023000949.1 | 2.8e-60 | 86.00 | uncharacterized protein LOC111495232 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EH69 | 4.6e-61 | 86.00 | uncharacterized protein LOC111434271 OS=Cucurbita moschata OX=3662 GN=LOC1114342... | [more] |
A0A6J1KLE3 | 1.3e-60 | 86.00 | uncharacterized protein LOC111495232 OS=Cucurbita maxima OX=3661 GN=LOC111495232... | [more] |
A0A5D3C2L6 | 7.3e-59 | 83.01 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BC63 | 7.3e-59 | 83.01 | uncharacterized protein LOC103488324 OS=Cucumis melo OX=3656 GN=LOC103488324 PE=... | [more] |
A0A0A0LVV5 | 1.0e-52 | 78.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538210 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G21740.1 | 6.6e-12 | 41.35 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G30515.1 | 8.1e-10 | 36.36 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |