CcUC03G049260 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G049260
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr03: 7201947 .. 7202387 (+)
RNA-Seq Expression	CcUC03G049260
Synteny	CcUC03G049260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGCCAAACTGAAAACTTGGTAGAGAAAATAGAAAATGCTCTAAAGAACCCAACCAGCTTTGAGTTTTGTAATTGTAGCTGTGGGATCCCAATTCCCACAGCTTCTCCCTCAATTTCCATGGCAAGAAGCTCTCATCTTCCATTGCCGCTCTCCATTTTCCTCCTCTCCTTCCTTTTCTTCTTCTTCTTCCTCTGCTTGTCATGTAATGCCTTATCCCCAGATCGCAAATCCAACTTTCCCAGTTCGGATCGTACTTTATTGAGCTTACAGAGGAGGAGAGATCAACAAATCTCTAATTGCGGCGAAAAGGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGCGATGTCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCCTGTGATTGA

mRNA sequence

ATGGATAGCCAAACTGAAAACTTGGTAGAGAAAATAGAAAATGCTCTAAAGAACCCAACCAGCTTTGAGTTTTGTAATTGTAGCTGTGGGATCCCAATTCCCACAGCTTCTCCCTCAATTTCCATGGCAAGAAGCTCTCATCTTCCATTGCCGCTCTCCATTTTCCTCCTCTCCTTCCTTTTCTTCTTCTTCTTCCTCTGCTTGTCATGTAATGCCTTATCCCCAGATCGCAAATCCAACTTTCCCAGTTCGGATCGTACTTTATTGAGCTTACAGAGGAGGAGAGATCAACAAATCTCTAATTGCGGCGAAAAGGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGCGATGTCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCCTGTGATTGA

Coding sequence (CDS)

ATGGATAGCCAAACTGAAAACTTGGTAGAGAAAATAGAAAATGCTCTAAAGAACCCAACCAGCTTTGAGTTTTGTAATTGTAGCTGTGGGATCCCAATTCCCACAGCTTCTCCCTCAATTTCCATGGCAAGAAGCTCTCATCTTCCATTGCCGCTCTCCATTTTCCTCCTCTCCTTCCTTTTCTTCTTCTTCTTCCTCTGCTTGTCATGTAATGCCTTATCCCCAGATCGCAAATCCAACTTTCCCAGTTCGGATCGTACTTTATTGAGCTTACAGAGGAGGAGAGATCAACAAATCTCTAATTGCGGCGAAAAGGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGCGATGTCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCCTGTGATTGA

Protein sequence

MDSQTENLVEKIENALKNPTSFEFCNCSCGIPIPTASPSISMARSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

Homology

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BLAST of CcUC03G049260 vs. NCBI nr
Match: KAG6573331.1 (hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.5 bits (415), Expect = 7.0e-37
Identity = 83/105 (79.05%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 42  MARSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISN 101
           M RS HL  PLSIFL+SFL FF F+C+S NALS  RK N PSSDR LLSLQRRRD++I N
Sbjct: 1   MGRSFHLHTPLSIFLVSFL-FFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPN 60

Query: 102 CGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           CGEKVSALQCS+TP CRWCRSD IDDTCF+RAEALRLPQQVFSCD
Sbjct: 61  CGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD 104

[Close]

BLAST of CcUC03G049260 vs. NCBI nr
Match: KAA0044701.1 (hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa] >TYK16886.1 hypothetical protein E5676_scaffold130G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-29
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 73  LSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTR 132
           LSPDRK N PSS RTL +LQRRRDQQISNCGEKVSA QCSQT KCRWCRSDVIDDTCFTR
Sbjct: 4   LSPDRKFNSPSSYRTLSNLQRRRDQQISNCGEKVSASQCSQTLKCRWCRSDVIDDTCFTR 63

Query: 133 AEALRLPQQVFSCD 147
           AEALRLPQQVFSCD
Sbjct: 64  AEALRLPQQVFSCD 77

[Close]

BLAST of CcUC03G049260 vs. NCBI nr
Match: OMO65460.1 (hypothetical protein COLO4_31211 [Corchorus olitorius])

HSP 1 Score: 92.0 bits (227), Expect = 4.4e-15
Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 53  SIFLLSFLFFFFFLCLS--CNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQ 112
           +I  LS LF   FL LS      + D +  + S  R+LL+LQR    QI NCGE +S  Q
Sbjct: 4   TICKLSTLFPILFLLLSTLSQLSAADVEDPYVSRFRSLLALQRNNKNQIPNCGEMMSRSQ 63

Query: 113 CSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           C Q PKCRWCRS+ +DD CF ++EA RLPQQVF CD
Sbjct: 64  CLQNPKCRWCRSEALDDMCFIKSEAWRLPQQVFLCD 99

[Close]

BLAST of CcUC03G049260 vs. NCBI nr
Match: KDP21149.1 (hypothetical protein JCGZ_21620 [Jatropha curcas])

HSP 1 Score: 88.2 bits (217), Expect = 6.4e-14
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 57  LSFLFFFFFLCL----SCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCS 116
           +SF  F  FL      S +  S  +  +  +S R+LL+ QR   QQI NC   V+  QCS
Sbjct: 8   ISFSIFLIFLATLLQSSLSYASTTQDPSLIASHRSLLAAQRNAQQQIPNCSGMVARSQCS 67

Query: 117 QTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           Q PKCRWC+S+ +DD CF++ EA RLPQQVF CD
Sbjct: 68  QNPKCRWCKSEALDDMCFSKIEAWRLPQQVFVCD 101

[Close]

BLAST of CcUC03G049260 vs. NCBI nr
Match: EOY27907.1 (Uncharacterized protein TCM_029626 [Theobroma cacao])

HSP 1 Score: 88.2 bits (217), Expect = 6.4e-14
Identity = 51/100 (51.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 57  LSFLFFFFFLCL-------SCNALSPDR---KSNFPSSDRTLLSLQRRRDQQISNCGEKV 116
           LS LF   FL L       S ++ SPD    K    S  RTLL LQR    QI +CGE +
Sbjct: 8   LSALFPILFLLLLTLSQSSSSSSSSPDNITGKEPSVSRYRTLLGLQRNTKNQIPSCGEMM 67

Query: 117 SALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           S  QC Q PKCRWC S+ +D+ CF++AEA RLPQQVF CD
Sbjct: 68  SRSQCLQNPKCRWCHSEALDNLCFSKAEAWRLPQQVFLCD 107

[Close]

BLAST of CcUC03G049260 vs. ExPASy TrEMBL
Match: A0A0A0LX55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G467180 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.6e-42
Identity = 91/103 (88.35%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 44  RSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCG 103
           RSSHL  PLSIFL+SFLFFFF   +SCNALSPDRK N PSS RTL SLQRRRDQQISNCG
Sbjct: 4   RSSHLSSPLSIFLISFLFFFF---ISCNALSPDRKFNSPSSYRTLSSLQRRRDQQISNCG 63

Query: 104 EKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           EKVSALQCSQTPKCRWCRSD+IDDTCFTRAEALRLPQQVFSCD
Sbjct: 64  EKVSALQCSQTPKCRWCRSDIIDDTCFTRAEALRLPQQVFSCD 103

[Close]

BLAST of CcUC03G049260 vs. ExPASy TrEMBL
Match: A0A5A7TT10 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00180 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 73  LSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTR 132
           LSPDRK N PSS RTL +LQRRRDQQISNCGEKVSA QCSQT KCRWCRSDVIDDTCFTR
Sbjct: 4   LSPDRKFNSPSSYRTLSNLQRRRDQQISNCGEKVSASQCSQTLKCRWCRSDVIDDTCFTR 63

Query: 133 AEALRLPQQVFSCD 147
           AEALRLPQQVFSCD
Sbjct: 64  AEALRLPQQVFSCD 77

[Close]

BLAST of CcUC03G049260 vs. ExPASy TrEMBL
Match: A0A1R3H5C1 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31211 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.1e-15
Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 53  SIFLLSFLFFFFFLCLS--CNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQ 112
           +I  LS LF   FL LS      + D +  + S  R+LL+LQR    QI NCGE +S  Q
Sbjct: 4   TICKLSTLFPILFLLLSTLSQLSAADVEDPYVSRFRSLLALQRNNKNQIPNCGEMMSRSQ 63

Query: 113 CSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           C Q PKCRWCRS+ +DD CF ++EA RLPQQVF CD
Sbjct: 64  CLQNPKCRWCRSEALDDMCFIKSEAWRLPQQVFLCD 99

[Close]

BLAST of CcUC03G049260 vs. ExPASy TrEMBL
Match: A0A061GFG8 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029626 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.1e-14
Identity = 51/100 (51.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 57  LSFLFFFFFLCL-------SCNALSPDR---KSNFPSSDRTLLSLQRRRDQQISNCGEKV 116
           LS LF   FL L       S ++ SPD    K    S  RTLL LQR    QI +CGE +
Sbjct: 8   LSALFPILFLLLLTLSQSSSSSSSSPDNITGKEPSVSRYRTLLGLQRNTKNQIPSCGEMM 67

Query: 117 SALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           S  QC Q PKCRWC S+ +D+ CF++AEA RLPQQVF CD
Sbjct: 68  SRSQCLQNPKCRWCHSEALDNLCFSKAEAWRLPQQVFLCD 107

[Close]

BLAST of CcUC03G049260 vs. ExPASy TrEMBL
Match: A0A067JNS3 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21620 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.1e-14
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 57  LSFLFFFFFLCL----SCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCS 116
           +SF  F  FL      S +  S  +  +  +S R+LL+ QR   QQI NC   V+  QCS
Sbjct: 8   ISFSIFLIFLATLLQSSLSYASTTQDPSLIASHRSLLAAQRNAQQQIPNCSGMVARSQCS 67

Query: 117 QTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD 147
           Q PKCRWC+S+ +DD CF++ EA RLPQQVF CD
Sbjct: 68  QNPKCRWCKSEALDDMCFSKIEAWRLPQQVFVCD 101

The following BLAST results are available for this feature:

BLAST of CcUC03G049260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573331.1	7.0e-37	79.05	hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0044701.1	4.1e-29	90.54	hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa] >TYK1688...	[more]
OMO65460.1	4.4e-15	52.08	hypothetical protein COLO4_31211 [Corchorus olitorius]	[more]
KDP21149.1	6.4e-14	47.87	hypothetical protein JCGZ_21620 [Jatropha curcas]	[more]
EOY27907.1	6.4e-14	51.00	Uncharacterized protein TCM_029626 [Theobroma cacao]	[more]

BLAST of CcUC03G049260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC03G049260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX55	4.6e-42	88.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G467180 PE=4 SV=1	[more]
A0A5A7TT10	2.0e-29	90.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1R3H5C1	2.1e-15	52.08	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31211 PE=4 SV=1	[more]
A0A061GFG8	3.1e-14	51.00	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029626 PE=4 SV=1	[more]
A0A067JNS3	3.1e-14	47.87	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21620 PE=4 SV=1	[more]

BLAST of CcUC03G049260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36896	OS01G0729500 PROTEIN	coord: 58..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G049260.1	CcUC03G049260.1	mRNA