CcUC03G048650 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G048650
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr03: 6493030 .. 6496773 (-)
RNA-Seq ExpressionCcUC03G048650
SyntenyCcUC03G048650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGTATGTGGGGAGTCAACTTGGTAAGGTTTACAACAATGATCTTAGAATGGCCAATCAAATTCCATTGATGATGTTGTGGTAATTATGATATCAATTATTCCATGGGTAATAATTTGACAAACAGATAGATGGTCCATAACTTCATCCCTAATATGGATAAACTAGAGCTACCTAACCATTGGGACCATGTTCCTTAATTTGCTTGTTCATTAAATATCCCTCCCCCCAAAAGAAAAGAGCAAATTAATCATCCTAATAGTTTTATGATCTTGGTACACGTTATAGGTTCAAATCATCATGACCAAATGCTAAAATATTAAGCATCCCATAAATTTTCTAACACACAATATCGTATGGTGGGTCAAGAAATAGTGCTAAATGCTAATAGAATTAGTCGAAAGGCTTAATCTAGCCCAACAACTCACAATTATCTGCAATGGCCTGTACTTCTTCCTAGTATGCATTATATCCCATCCAGCACGGTTCAGAATTAGGGCTTCATAGATTTCACTTACATAGTAATTTAATCATGAGCCCATCTGTAAACAGTAAATATAGTTTCCTGGTTTTTTTACACAACTCAGGTGGGATGGGATTCATGTCCAGACTTCACAAAACTGTATCTATGAAGGGCCAGTAATGGATTTTTAAACGAAAAGGTTGTTAATTTGTTGTGTTTTGCAAAGCCAGCTGATTAAAGATCATTAAAACTATAACTTCATAGAATAGAAACACAAAACCTAGAGTACCATCAGTGATTCTATTGTTGGCCACTTCTAGAAAGAAAAGCACACCACCTTATTTTCATCCGTAATGCTGATGAGTAAATCTGTATGCATGAAAAGTCAGCCCACCTAAGCTAAAAGAGAATGTGAAAGCTCCATAACAATTAACATGTACAAAGTCTTCAAACCATGAAAAGGAAAAAGTAAACTGTACTAAAATGATAAACTATGGCATTGCCTGTCATGCAATGTTTCTACTATTACAAGCAAGTCTTTAGAGGAAAAGGCAAAAAGGAAAAGGAAAACGATGTAAAAAAGGCAAGTTACTTTAATGCATGAGAATGATGTCTAGGCAATGAGTTAGTTCATAAAAGAAGACGCTGGTGTTCAAAAACAAGGCTAATGATACGTACCATGCATGGGGAATGCAAGTGGTAATCCGCGTGGCTTTACGCCAAATGCAACCTACAATGCTACAAAAATGTCTGGATGGAAGGATATAAATGGAACAGGAGAAATCATCCCAATTGGTATGCCAATGTTCTGTTTGGCTTCCCACTGACACCATGATTATGTAGAAAATACCAGTAAGAAGACTGGAAATATTGTTGAGCTGGTTAATGATAGTATCAAGCAGTAAAAAGTAGGGAAATAGAACATAAAAGAAATAGTGGTGCACATACTTGTCCAGGGAGGAAAGGGTGCAGCTGCACAAAAAATAAATATATGCTCACGAAATGCAACTTTTAGTAAATACTATAGACCCAAGAGATCAGTTCATCAACTGAAGTTGCAGCAATTTCATAGCATTGCAAGCTTTTCATTCATCACAAAAACAATTAACTATGGTACTCCACATTTCTCTCTCAGGAATGCATCCATTAATCACCATCTCATCCAGAATTCTAGAAGTTTTAAGAAGATCTCTTTTGTTACAAAAGCATTTTAACAATGAATCAAAAGTATCAACAGTGATATTAATACCACGTGTCAGGACGCTAAGATACAACTGAAATGCACGATTTGAATCGTTGATAGTACAGAGACCGTGAATTACTCTATTATGGGTCTTGACATGAAGGCTCCATGTTACTCTATTAGGTGTGATCCCACAAAGGACCATCTCATCCAAGAAGTTTGCAGCTTCTTGGAATCTGCAAACATCACAGAGGCGATTAACTATTTTCCCATACAACCCGGCATCTGGCTTCAAACCTTGGAGTTTCATTCTGTCAAGAATCTCTAAAGCTTCATTTAGTTTTCTTTCATTACAAAGTCCATTAATCAATGTACTATAACTGATCATGTTGGGCCTCAAGCGTTTTTGGACCATCAACTCAAAGAGGTCTCTAGCTCGTGAAGAATGACCAGCCTTGCAAAATCCGTTCATTAGAGAACTATAAGTGAACACATTAGGTTCGATACCCTTGCCCATCATATCTTCAAGTAATCCCATTGCTTCATCCACATTGTTCAGCTGACACAGACCATGTATTAGTGAACTATAGGTGATGACAGAAGGTGAACAACCTTTTGTCTCCATCTCTTGCAATAATTCCTTTGCCCCAACAATGTTTCCGAATCTACATAATCCATTGATCAAAGTTCCATAAGTATATGAATCAGGTTCACACCCATGATTAGACATTTCCCGGAAAATGTGCATTGCTTTTTCCATGGTTACACTATTCTTACAAAAGGCTTTGATTAGAACATTAAGAGAAGCTACAGTAGGGGGAATACCTACTTTTCTCATATACCTATAAAATCTAAAAGCTAATCTTAATTGATTCTCTTCCACAAGAATGGCAAGCACTGAAATGTAAGACTTCTCTGTAGGCTTGCAATGGAAATCCTGCATTTTATGGAAAACTCTTATGGAATCCAATGGCTTATGGATACGACCATATGCCCTACAAATGGAGAGAAGTATATCCTCAGTGACATCAATTTTCTCCTCCTTCATCCTATCAAGAAGTGTTTCTGCTAACCTGAACTGGTTTGCAGAAACTAACTTGCTAATCATGAGCCTAAAAGTATTGGGATTGTGCTTAAAACCATTTGTATACTCGGCTGTTGCAGAGTCGAATATGAGAAGTGCCTTGTTTATGTCTTGTTCCGCTCGGATTAGTTGTTCAACATGAGCAGGTGTGACTGTTTTTGCCCATTTAAACATAGCTTTACTGCCCATTGTTCCTCTCTTGCTTAAAGCATCAGATTTTAACTTCCGACTGAACCTGAAGCATACGAATCTCATTCAATATTTTGAAGTCCATCCAAAAAAAATAATCGCAGTGCATATAAACTCTAGGAAAGTTTGAAGTTCTTAAAAAGATGCCAACAAATACAACAAACCCTTGATTCACATCACCAACGTTTTATTGTTTTAGGGAATAGAATAGAACATGCATTGCTACCACACTGTAGATGGTTCAGTAATCATTAAAGAATTTCACAACAAACCAAGTTTCTTGAAAATTAAGCAATGAAACATTTGCTACTAGAAGTAGTATAATACAGGGGAGGAGAATTATTTGAATGGGGATAAATTTGTTTAGTTCCCAAACTAAGTGGATGGGAACTCATACTTTTTGACACTAGAGAATGAATGTTCTAATGAATTAAAACCACAGGAGTGTGATAGGGTCTCAGGGGTAAAGGTGTACATTCGAAGGCATGAGAGAGGGTTAAAAAATATGAGTTAGTCATGAGAGTTTTTGTGAGGAATATTTGTTAGTTACTTGGGAGTTTTAGTATATATGGGGGAAGGAGTGATAGACCCCTGTAACGACCCGACCTTGAGACTAGCCGGCGCTACACTAACAAAATAGATGGAGATGCGCAAAGAAATCAACGAGTGAACCAAATCTCTTACCACGAACCCACAAAACCTACGAACCGGTGAGAAGGCTGCCGGCGGCTAGCGAAGGTGGCGGCTACTGCAATCAACGGGACCCACGAGCGGCGGAGAGGGAACGGAAACAGACGCGCGGCCGGCCGAACGACTCGACG

mRNA sequence

ATGGCTAGAATGCATCCATTAATCACCATCTCATCCAGAATTCTAGAAGTTTTAAGAAGATCTCTTTTGTTACAAAAGCATTTTAACAATGAATCAAAAGCTTGCAATGGAAATCCTGCATTTTATGGAAAACTCTTATGGAATCCAATGGCTTATGGATACGACCATATGCCCTACAAATGGAGAGAAAAATCAACGAGTGAACCAAATCTCTTACCACGAACCCACAAAACCTACGAACCGGTGAGAAGGCTGCCGGCGGCTAGCGAAGGTGGCGGCTACTGCAATCAACGGGACCCACGAGCGGCGGAGAGGGAACGGAAACAGACGCGCGGCCGGCCGAACGACTCGACG

Coding sequence (CDS)

ATGGCTAGAATGCATCCATTAATCACCATCTCATCCAGAATTCTAGAAGTTTTAAGAAGATCTCTTTTGTTACAAAAGCATTTTAACAATGAATCAAAAGCTTGCAATGGAAATCCTGCATTTTATGGAAAACTCTTATGGAATCCAATGGCTTATGGATACGACCATATGCCCTACAAATGGAGAGAAAAATCAACGAGTGAACCAAATCTCTTACCACGAACCCACAAAACCTACGAACCGGTGAGAAGGCTGCCGGCGGCTAGCGAAGGTGGCGGCTACTGCAATCAACGGGACCCACGAGCGGCGGAGAGGGAACGGAAACAGACGCGCGGCCGGCCGAACGACTCGACG

Protein sequence

MARMHPLITISSRILEVLRRSLLLQKHFNNESKACNGNPAFYGKLLWNPMAYGYDHMPYKWREKSTSEPNLLPRTHKTYEPVRRLPAASEGGGYCNQRDPRAAERERKQTRGRPNDST
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G048650.1CcUC03G048650.1mRNA