CcUC03G046340 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGGGAAATAAAGGCGGATGGAAACAGTGAGAGTGCAGCAAAATTTCGTGAATTAACTCCAGAAGCCTCTGCAATGGAAACTGGGATGGAAGAAGACGATTCCGCCTCCGAACTCTTGAGGGACAGATTCCGACTCTCCACCATTTCTATTGCTGAAGCTGAAGGTTAATTCTCTTAATCTTCGACCTCTCTTGTTTTATATGTAATATAAGCTGAATGCCAGACGAATTTTTCATATTTTTGTTTGGCTTGCTCTATTTTTTTTTTCCAACTGTTTGGTTTGTTATGCAGCGAAGAGAAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCTGATTTAGCCTTCAAATATACAAGTTACTTTACTTTTCTTTTCTGCCTGTTTTGAGTCTGCAATGTTATTTTGAGCACTCTGTTTCTACATGACTACACCTTATATAACAGCATAATATATTGATCACTGAAGTTGCTCATCCCACCATTCGGAACACTTTCATTCTTCATTATTTTAGATAACCTAATTGCTAATTCTTTTAATTTTACATTTCTATATAATTTAGCATGCGTTCGGTTTGTTGGGACGCCTCTCTGTGCTGTGTTGTTAAATTGTGTGACCTAGTTGGAAGGAAACTGCATAATTTTGGTAAAGTTTAAGACAGAAAAGAGTTTCCAGAAGAACAAATGATGGAGAGACTATTGTGATAACTTAAATAATGTCTTTGCACGATACTTTTGGATTCTAATCAGATGTTCTTATAGTTCATATAAATGTTTCTTTGTTTAGATTTCAATCACGTAAAGAAGACATATAGTTATTATTTTAATTTATATCTATATATTTGCTTCAAGTTCGTTTTCTGTTACCGATGAATATTCTATTCATTATCTAAAAGAAGCAAATATATACTTATACTTACTTATCTCATATGCATGAAATTAGTGTAGTCCTTCATCATAGGCATGAATGATTTGGTAGGTTTACAAAATTTCAACCAGACTTTGAGTTCATATCTTGGTATAGGGTCACACTTATGTTTGTAGTCACAGGGCTAACATATGAACCGCCAATGGTGTGTATAATACATGCAAGGAAAACAATTTTTTGTCAATTACTCTGCTGCAGTAGTTCTAGTTGCTAACCAGCAAGGAAAGAAGATAATTCTGTCATAGTTGTGTTTACGTTGTTTTTATGATTCTCAAAGTGTTGCAATGAGATAACGGAATGATAACTTGTGTAGCAGAACAGTTGGCAAAGGACCTTGAGTTATTTGTTCAGCATGCTGGTCGGAAATCTGTGAATACAGAAGATGTAATACTATCAGGTTAGATGGTCTGATTCCCAAGTTGTTGTTGTTACTGTCTAGTTATATTTAGTCCATATGCAACAGACTTGAAGTAATACATAATTGCCTGAACCTCTTTGCTTCTGCTTCATTTTGGTCTCAGCCCATAGAAACGAGCATTTGGCTGCTATATTAACATCCATTTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGAAAAAAGGCACAAAAAAAAGAAGATAGAGATAGAGGTGCAGTGCATATTACCGACGCCTAAGCACATCTCCCATCGGGCTGATCTAGTTAACAAGGGTGCATACCAACAAGCAATGGCAATAGCTTATGATCTCTTTCCTTTTTCTTGGTTATACTAATTAGTAATACTGTTTTCAAATCACATGGGCCTATGGAGTTCTTCTGATTTAAAGGATAAGCTTCTGCACCATGCAAATTCATTTGTGTTGGTTTGTTTTAGGTATTTGAGATTGTCGAAGCTTGAGTTTCAATGTTCATTGGTGACCAACTCTGAACGGGGAGATAAATTGCTCTTTGTAAATCTACAGCACAAGTGTATGATTTAAGACTTTTAGTTAAGTACTCA GGAGGGAAATAAAGGCGGATGGAAACAGTGAGAGTGCAGCAAAATTTCGTGAATTAACTCCAGAAGCCTCTGCAATGGAAACTGGGATGGAAGAAGACGATTCCGCCTCCGAACTCTTGAGGGACAGATTCCGACTCTCCACCATTTCTATTGCTGAAGCTGAAGCGAAGAGAAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCTGATTTAGCCTTCAAATATACAAATAACGGAATGATAACTTGTGTAGCAGAACAGTTGGCAAAGGACCTTGAGTTATTTGTTCAGCATGCTGGTCGGAAATCTGTGAATACAGAAGATGTAATACTATCAGCCCATAGAAACGAGCATTTGGCTGCTATATTAACATCCATTTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGAAAAAAGGCACAAAAAAAAGAAGATAGAGATAGAGGTGCAGTGCATATTACCGACGCCTAAGCACATCTCCCATCGGGCTGATCTAGTTAACAAGGGTGCATACCAACAAGCAATGGCAATAGCTTATGATCTCTTTCCTTTTTCTTGGTTATACTAATTAGTAATACTGTTTTCAAATCACATGGGCCTATGGAGTTCTTCTGATTTAAAGGATAAGCTTCTGCACCATGCAAATTCATTTGTGTTGGTTTGTTTTAGGTATTTGAGATTGTCGAAGCTTGAGTTTCAATGTTCATTGGTGACCAACTCTGAACGGGGAGATAAATTGCTCTTTGTAAATCTACAGCACAAGTGTATGATTTAAGACTTTTAGTTAAGTACTCA ATGGAAACTGGGATGGAAGAAGACGATTCCGCCTCCGAACTCTTGAGGGACAGATTCCGACTCTCCACCATTTCTATTGCTGAAGCTGAAGCGAAGAGAAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCTGATTTAGCCTTCAAATATACAAATAACGGAATGATAACTTGTGTAGCAGAACAGTTGGCAAAGGACCTTGAGTTATTTGTTCAGCATGCTGGTCGGAAATCTGTGAATACAGAAGATGTAATACTATCAGCCCATAGAAACGAGCATTTGGCTGCTATATTAACATCCATTTGCAATGATCTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGAAAAAAGGCACAAAAAAAAGAAGATAGAGATAGAGGTGCAGTGCATATTACCGACGCCTAA METGMEEDDSASELLRDRFRLSTISIAEAEAKRSGMEISEPVMTCVADLAFKYTNNGMITCVAEQLAKDLELFVQHAGRKSVNTEDVILSAHRNEHLAAILTSICNDLKTKEPQSERKRKKAQKKEDRDRGAVHITDA Homology
BLAST of CcUC03G046340 vs. NCBI nr
Match: XP_011652290.1 (protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 homolog isoform X1 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 1.9e-55 Identity = 121/138 (87.68%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of CcUC03G046340 vs. NCBI nr
Match: XP_038894698.1 (protein MHF1 homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 3.2e-55 Identity = 122/138 (88.41%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of CcUC03G046340 vs. NCBI nr
Match: XP_004154006.1 (protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 homolog isoform X2 [Cucumis sativus] >KGN64440.1 hypothetical protein Csa_013391 [Cucumis sativus]) HSP 1 Score: 224.2 bits (570), Expect = 7.1e-55 Identity = 120/138 (86.96%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of CcUC03G046340 vs. NCBI nr
Match: XP_038894699.1 (protein MHF1 homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54 Identity = 121/138 (87.68%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of CcUC03G046340 vs. NCBI nr
Match: XP_008440142.1 (PREDICTED: centromere protein S isoform X1 [Cucumis melo] >KAA0055356.1 centromere protein S isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53 Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy Swiss-Prot
Match: Q9FI55 (Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35 Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy Swiss-Prot
Match: Q2TBR7 (Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 36/113 (31.86%), Postives = 57/113 (50.44%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy Swiss-Prot
Match: Q8N2Z9 (Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05 Identity = 37/131 (28.24%), Postives = 63/131 (48.09%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy Swiss-Prot
Match: O74807 (Inner kinetochore subunit mhf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mhf1 PE=3 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05 Identity = 32/106 (30.19%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy Swiss-Prot
Match: Q6NRI8 (Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.1e-05 Identity = 31/121 (25.62%), Postives = 59/121 (48.76%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy TrEMBL
Match: A0A0A0LR97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.4e-55 Identity = 120/138 (86.96%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy TrEMBL
Match: A0A5A7UM53 (Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002010 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 8.4e-54 Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy TrEMBL
Match: A0A1S3B159 (centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 8.4e-54 Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy TrEMBL
Match: A0A5D3BHQ8 (Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004950 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53 Identity = 117/138 (84.78%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CcUC03G046340 vs. ExPASy TrEMBL
Match: A0A1S3B173 (centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53 Identity = 117/138 (84.78%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CcUC03G046340 vs. TAIR 10
Match: AT5G50930.1 (Histone superfamily protein ) HSP 1 Score: 150.6 bits (379), Expect = 9.2e-37 Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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