CcUC03G045740 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATACAGAATCATTTCATCACAGTCTGTAAGCTAGAGGTTTGAATTTTCAAAGAAATACAGAAGAGAAGACTCAGTCTCTTTCTCTGACAGTTAAATAATAGACCATTTCTCCCGGAAAAAGCCTCTATGGACTGTGGGATACATAAAGAAACAATATTCATATTCTTTTCTTTGATCATATTCATCCGTGTGGCTTTTTGGCATTGCATTGACAACAACAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTGTGAGCTCCTCTGTCTCTGATTTTTTTTTTTTTAATTTTTGTTTTATTTTATTTTTACATTTTTCTTTTCTGAGTTCTTTATGGTCGATTGGTTGATGTCATGTCTTTTGGGGCTCTCTCTGAACCTTGGTTATAGCATCTTTTGTTGTGGGATTTTGTAACCATTGCAAAAGTTTCATATGTTGTAATTTACTTTACAAGTTAATGATATGCCTCGTTTTTCATGTCCTTTAAAGTTAATGGAAATGTGACTGGCAAGAGTTGCCAAGGTTTGCCTTTATGGTGTTCTGGTTTTGAAGAGGAGAAAAAGAAGTTAAGATCTTCTCTGCTTCGTTCGTATGAAATGTTATTGCTTAAAAAGAGGACTAAAAAGTAGTTTTGAAACATTTTAGAGGTATCCTTCAAAATTTTTGAGTCAATCCCATCTTAAAATCTCAATAAATTATGATCCTCACGGTTGTAAGTGGACTTTGGAGTAGGTGAAGCCTCTCCGGAGTTAGTTAGGTGGGCTACGAGCATAATGCAAGTAGCCGAGGTCTCGATAATCCGGTTAGAAAAAAAAGTTATTTGAGGATAAAAGTTAATAGCAGCTCCCCTTCAGTTTCTCAATTGTTTCTAATAGAAACTAGATGTTTGCTGTCATAATAGTTAGTTCTGGAGTTTATGTTGGTTCAAATATTGGAATGAAGCGATTATCTTATATTGAAATATCTTTATATGATGCAGTGCAGTTTCATTTCCAAGAGGCAAGGATGGTTCATCCTTCCAGATGAAATTAGTTTGTAACCATTTGACACCAGTCATTCTTTACTTGCTTCAATGGGTGGATTGCTCATGTTCATATCTATCTTTGAGTTACTTCAACCTATTCCACATAGTTCTGTACAAGGTGAGCAAGTTGACTAAGAAGTTCTAAAAGTATTTGATATAAATTAGATTTACCATAATCCACCTGCTTAAACTTTTAAGTTGATTGGTGATTTAACATGGTACCATTGTTGAGAAAAATATGACTTTTCCCGGATGAAATGAAAATTGGATTCATGTAACAAGAGAAAGGTTTCCCATTCCTTAGCCGGAAAAATATGTGGCCATGAAATAGGATTAAGTGGCCACAGTAGAAAATTATGTGTTTGAACCCTTGTAATGTCATTTACTCTAACAAGTTTCAAACTCACAACTGACAAAGTGTTAAAGAATTTGATATAATTAAATTTGGCATAATCCAACAACTTAAACTTTTAGGTTGATCGGTGATTTAACAAGAAGAAACAAAGATAAAAGGGTAAAAGAAGAGAATAATGAAGTTTGATAATTTATGTTAATCGACAGGTGGACTTTGATGGAAGGCCAGATATCTCATCATACAGAAGGAAAGCAACTATAAGTGAATTCTACTGTACGTGATCTATCTTTTCTGCTCCTTTATTTATCTTTATTGTTTTAAAGTTCTTTGAAGGTTGTGATATGTCAAGCAAAAAATTAGAATGTGCCTTTGTTCTGGCACGTTTCTTTTGTACATCAGTTGAAAACAATCATCCTCATGTATCTATTCTCTTCTGGAAAAGAGTTGTGGCAAACTGCTAACAATGTGCTTGCATATTGTTGTATAGTTAAAATAACCAGAAAACTTCAGTTCTTTTGTACTTCACAGTTTAAGATGATATTAATTCTCTTTAACATGAATGCAGCTGTTATATTGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATCCCCACAAGGGAATGGCCATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTAGATTTGGACATAGAAAGAGCAGATGAATGTGGGATCTGTTTGGAGTCGCATACCAAAATTGTCTTGCCACATTGTTGCCATGCCTTGTGCACAAAATGCTACCATGATTGGTATTACTATTGAAGGCTTCACTCTTATGTCCATGTTTTTGACTCACTATATTCTTTATGGCTGAATGTACTATTAGAGAGAAAAAAAAAAAAAAACCTTTGATGCTCCTTTCCCTCATCTGTTACAGGAAATCGAAGTCGGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGCAGTAATGACGTGGTCGACACTCATACTATCATGAAAGAAGATATGTTACGCTTCTATCTTTTCATAAACAACCTACCTGAGGATACACCTGATGTTCTATTCTTAATGTATTATGAGCACTTGTTGTAACAAACCAAATGATTAGAACATTGTACATTGGAGGACTTTGCTAATTATCCACAAATTTGGAGGGTTGGTTTTTGTTCTGATATCGGCTCTCGTTCTGTTTGACGTTTGGAATGCTGCATGCGTTCA TATACAGAATCATTTCATCACAGTCTGTAAGCTAGAGGTTTGAATTTTCAAAGAAATACAGAAGAGAAGACTCAGTCTCTTTCTCTGACAGTTAAATAATAGACCATTTCTCCCGGAAAAAGCCTCTATGGACTGTGGGATACATAAAGAAACAATATTCATATTCTTTTCTTTGATCATATTCATCCGTGTGGCTTTTTGGCATTGCATTGACAACAACAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTGTGAAGCCTCTCCGGAGTTAGTTAGGTGGGCTACGAGCATAATGCAAGTAGCCGAGGTGGACTTTGATGGAAGGCCAGATATCTCATCATACAGAAGGAAAGCAACTATAAGTGAATTCTACTCTGTTATATTGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATCCCCACAAGGGAATGGCCATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTAGATTTGGACATAGAAAGAGCAGATGAATGTGGGATCTGTTTGGAGTCGCATACCAAAATTGTCTTGCCACATTGTTGCCATGCCTTGTGCACAAAATGCTACCATGATTGGAAATCGAAGTCGGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGCAGTAATGACGTGGTCGACACTCATACTATCATGAAAGAAGATATGTTACGCTTCTATCTTTTCATAAACAACCTACCTGAGGATACACCTGATGTTCTATTCTTAATGTATTATGAGCACTTGTTGTAACAAACCAAATGATTAGAACATTGTACATTGGAGGACTTTGCTAATTATCCACAAATTTGGAGGGTTGGTTTTTGTTCTGATATCGGCTCTCGTTCTGTTTGACGTTTGGAATGCTGCATGCGTTCA ATGGACTGTGGGATACATAAAGAAACAATATTCATATTCTTTTCTTTGATCATATTCATCCGTGTGGCTTTTTGGCATTGCATTGACAACAACAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTGTGAAGCCTCTCCGGAGTTAGTTAGGTGGGCTACGAGCATAATGCAAGTAGCCGAGGTGGACTTTGATGGAAGGCCAGATATCTCATCATACAGAAGGAAAGCAACTATAAGTGAATTCTACTCTGTTATATTGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATCCCCACAAGGGAATGGCCATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTAGATTTGGACATAGAAAGAGCAGATGAATGTGGGATCTGTTTGGAGTCGCATACCAAAATTGTCTTGCCACATTGTTGCCATGCCTTGTGCACAAAATGCTACCATGATTGGAAATCGAAGTCGGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGCAGTAATGACGTGGTCGACACTCATACTATCATGAAAGAAGATATGTTACGCTTCTATCTTTTCATAAACAACCTACCTGAGGATACACCTGATGTTCTATTCTTAATGTATTATGAGCACTTGTTGTAA MDCGIHKETIFIFFSLIIFIRVAFWHCIDNNNFKQRGCWIVIRGFLLAILTKISLSFLKLIFAMPMLCEASPELVRWATSIMQVAEVDFDGRPDISSYRRKATISEFYSVILPSLQRLCDYASQVDSIEDPHKGMAISKRLEHKRELLDLDIERADECGICLESHTKIVLPHCCHALCTKCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPDVLFLMYYEHLL Homology
BLAST of CcUC03G045740 vs. NCBI nr
Match: XP_031737753.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus]) HSP 1 Score: 417.5 bits (1072), Expect = 8.0e-113 Identity = 213/289 (73.70%), Postives = 227/289 (78.55%), Query Frame = 0
BLAST of CcUC03G045740 vs. NCBI nr
Match: KAA0055299.1 (RING-H2 finger protein ATL47-like [Cucumis melo var. makuwa]) HSP 1 Score: 323.2 bits (827), Expect = 2.1e-84 Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0
BLAST of CcUC03G045740 vs. NCBI nr
Match: XP_016901782.1 (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo] >TYJ99223.1 RING-H2 finger protein ATL47-like [Cucumis melo var. makuwa]) HSP 1 Score: 323.2 bits (827), Expect = 2.1e-84 Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of CcUC03G045740 vs. NCBI nr
Match: XP_011651953.1 (E3 ubiquitin-protein ligase AIRP2 isoform X2 [Cucumis sativus] >KGN64372.1 hypothetical protein Csa_013044 [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 5.1e-83 Identity = 149/169 (88.17%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CcUC03G045740 vs. NCBI nr
Match: XP_022137104.1 (uncharacterized protein LOC111008662 [Momordica charantia]) HSP 1 Score: 305.8 bits (782), Expect = 3.4e-79 Identity = 144/169 (85.21%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of CcUC03G045740 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.6e-34 Identity = 70/165 (42.42%), Postives = 103/165 (62.42%), Query Frame = 0
BLAST of CcUC03G045740 vs. ExPASy TrEMBL
Match: A0A5A7UPB0 (RING-H2 finger protein ATL47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001420 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 1.0e-84 Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0
BLAST of CcUC03G045740 vs. ExPASy TrEMBL
Match: A0A5D3BIW1 (RING-H2 finger protein ATL47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004340 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 1.0e-84 Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of CcUC03G045740 vs. ExPASy TrEMBL
Match: A0A1S4E0L5 (RING-H2 finger protein ATL47-like OS=Cucumis melo OX=3656 GN=LOC103484120 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 1.0e-84 Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of CcUC03G045740 vs. ExPASy TrEMBL
Match: A0A0A0LU99 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050110 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 2.5e-83 Identity = 149/169 (88.17%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CcUC03G045740 vs. ExPASy TrEMBL
Match: A0A6J1C699 (uncharacterized protein LOC111008662 OS=Momordica charantia OX=3673 GN=LOC111008662 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.6e-79 Identity = 144/169 (85.21%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of CcUC03G045740 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein ) HSP 1 Score: 200.3 bits (508), Expect = 1.9e-51 Identity = 100/175 (57.14%), Postives = 126/175 (72.00%), Query Frame = 0
BLAST of CcUC03G045740 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein ) HSP 1 Score: 192.6 bits (488), Expect = 3.9e-49 Identity = 95/176 (53.98%), Postives = 124/176 (70.45%), Query Frame = 0
BLAST of CcUC03G045740 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein ) HSP 1 Score: 192.6 bits (488), Expect = 3.9e-49 Identity = 95/176 (53.98%), Postives = 124/176 (70.45%), Query Frame = 0
BLAST of CcUC03G045740 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein ) HSP 1 Score: 153.7 bits (387), Expect = 2.0e-37 Identity = 70/157 (44.59%), Postives = 105/157 (66.88%), Query Frame = 0
BLAST of CcUC03G045740 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein ) HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36 Identity = 73/162 (45.06%), Postives = 103/162 (63.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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