CcUC03G044670 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G044670
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr03: 2634016 .. 2638996 (+)
RNA-Seq ExpressionCcUC03G044670
SyntenyCcUC03G044670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCAAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCGAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAATGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGCGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAATTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAACTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGTAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGACGGCTGATCATGATTGAGCTGGAATCATGGACCATGTGGTCTTAGAAGGCAGGACTTACATGTGAAATTTGATATCAGAACCACAAAGCGTCTTAGTCAGACCAAGCAGATAGAAAACCAATCTGTTTTGATTCCTGTCTTCCCAAATGTAGTTGTGTATCCATTGAAGGTTTAAGACTGACAGGTGTGATCTACTAAAAAGTTAAAAACCTATGATTTATCCAGATGCTTTGCTTTATATAGTTCTACATTGAGAAGACTACTGGAGAATCGTCATCCAATTGTGGCTACTCAGCTTATAGCTGGTACATACCTTTTGTGGCTACACACGGCTTATAAATGCTACAAAAATTAATCAATCAGAGGTTAGCCTCTTGAGACTACTTTAATAGTTCTTTTCAGTGACTTCAAAGAAATTTAAACAGTACTTGAAGCACTTTGACCTAGTTCTTTCACATTATAATAGGTGTATTCTTCTGTGATAGAGACGTCTTTGTGGGAGTTGAATTACAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTTTATCTCATCAAGTTCAAGGTACTTTTGCAAGCTGAGTTCATTTAACATTGATTTTTTGCTTGAAGAGCCAATAAAGAAAGTCATCCAAGTATAGGTTGTGTAAAAGATTACTCTCTGCACAGTGTGCACACTGACACATGGATTATCCCAAATACCAGTCCAGGAGGATAGTGCTCGATGTGTAGCATTATCCATGACAACATAATAGGTTCAATCTAGGTTAAATTGCATATTTGGTCTTTATGATTTGAAGAAAGTGAGAATTTAGTCCTTATAGTTTATAACTAGAATTGAGTCCCTATGGTTTGATAAAATCCTCGAAAATAGTCCCTATGCTAGGGATCTTCTATGATGATTTTATCAAATCATAGGAATCATTTATGAGGTTTCATCAAACCATTAGAACTAAATTCTAACTTTTAAAATTATAGGGACTGTATTCCAACTTTCTTATAGGGATCAAATTTGCAATTTAACCTAGCGTTTACTAATCTGATCATGCTACTGAACGACTGTGAAGTGTGAAGATTAGTAACCTAGTGTACTAGTCTTCATCTGCCAATCCCGAAATGGGCAAAGACATGTAATAAATATAGGAAAAGTGCAGAAAGAAGAAAGCATTTATTAGAACTATATAATATCACAGGTAGAATTTCATTTGAGGACAATAAGTTATGTATATCCGATTCCTTGGATAAAAAAAATTTGTATCACAGAATCTTGATGGTCATTTTGGCTGAAACAAATATTAGATTGGATTACCACTTGATTTTACTGGCCACAATCACCATTATCAACCCTTACAACAATTTGGGAAGATATTCTTAAAACCTAAGGAGGCAATGCATTGTTTCAATCTTTTACTAGTAGATTGGTGTCTAGTTGAATTTGCATTTAAGAACATGAAACATTGTAAGTAAACCAAATGTATGTTTATGATCTGAGAAATTGACCTCATTGTGTAAATTCAAATTATGAAGTCAAACTTTGTATTGAGCGAATAAAAATGATACATGAAGACGATTTTATGTGTAGCAATAAGGCAATAGCAAATAATATTTCCCATAAGAATTTGTACTTAATAACATGAAAAGTTGAAGTCAAGCTTGCTTATTTGGATATGTTTATAACATATGGTTAAGACACCTTTTACTATCTATATCAATTATTTGAAGGAAAAAAAGGGTCAAACATTGGAAGAAGAAGGTTATTTTTTATGTGGGTAATTGTTATAAATGACAAAACCGTTGGAAATATTTATGAATATAGCAAAATGTCATTTCTTGCTCTCATCTTTTCTACCTCCCCTTTTGACTTGTCTCTTCAGGGACATTCGATAAAATTAGAGCGATATCTCCCCTTTCGACTTTTCTCCCTCTCATCTCCTTCCTCCCACATTCTCATCTTTTCTATGTCCCCCTTTGTCTCCTTCCTCCTTCCTTCTTTTTTTCTCCCTCCTTCTCTGCTTCTCTCCACAATTAGAAACAAGAAGTCGTTCAAGATCGAGAGCATGAAAAAGAACAAGAGAGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGATTAAGAGCAAGATTGAGAGCATGACTGCGATTTAGAGCGAGAGTGCGAGCAAGATTTGAGAGCGACAACAAAATTAAGGAAGTGTATATTAACGAGAGCCTCTAGTACATTTTTACTTGTTATTCACCATCATAAAATATTACACAACCTTATTTTCAAAACATAGGTTAGATTCCAATTCAACTAAAAAATTTGGGTCATCCATACAAAATCCTCTTTAAACTTTTAGCTTGTATCTAAACGGTTCTTGAACTTTAAAATGTAGTGTATAACAAGTTTCTAAACTTTCAATTTTGTACCAAATAAGCCGCTGATATTCAAAAGTTTTAAAAATTAACTAATATATTAAATATAAAATTAAATTTTATGTTCAACAAGACTCTACACTTTCAATTTGGTGTTTAGTTGGTCAGTAAATTTTAAACTAGGTCAAATAGGTCAAGAACATATTTGACACAATTAAAATTTGAGAGACATGTTTAAAGTTGAAAGTTTAAAGATTAATACCTTTTTAAAAAGTTCGATGATCTATTAAATGCTTTCTAAATTTCATGGACCAAATAGACACAAATGCCAAAATTTGGAAACCAAACTTGCAATTTAGCCAACAAATAATCTTTGCTTCCTTCTAGTGAATAGACCATTGGTTTATTAATCAGCCTGTTATATTGATATTCATTTCATTTTCATGTCAAATCTTGTTAGTTATCAAAAGATTGTTGTTACAAAAGGAAAGTCTAGGATGGAACCTTTCCTAAAGATTATGAGATAAAAATAGAAGTCTAAATACCAAGATAGAAACCATACAACAAGACTTAACATCAATAACTTTTTTTTTTTTTCATGAACTTATCATGAATCTGTTCAATCCCTCAAAATCAATAAAGCCACTCTCAATTCTAGTCTGAACCATTAGATGTAGATAAAAAAGTTTAAGTTTAAATAACATTTTAGTCACGTTTGATCAATTCTAGTCTCTATACTTTTGTGCATCAAAAAGGCTTTCCTATTCAAGTTTAGCAGACTTTATTCACATTTAGCTACCATTCATTGCCAACCCAAAACTAGCTCACTCACGAAACACATACGTCATCACGTGGAAGACTAAGTGTTGTGAAGACTGGTTAACTAGATGATCCATTACTCAAAATTAGCTTACTCACAAAACACATACATTACTGTGACATAAATGCACTCCTATTTACTAGAATCAACTCCTAGTTCTTTAGTAGCAATCAGCGAAGGTTTAATGCTGCTTCTTCTAATCTAGATAGCCAAAAAAATCTTAAGCTTAAAATACTCCGTAAAAAATTGTTAACCACATTTAATAATTTCTACTTACAAAGCAACAAACAAAGGAAACAAAGCACCTTCCTGTTCAAATTTGGATTGTTTGCAAATTCAAAATATTGTTATTATGAGCTACAGGATTTAAGGGAGCAGCCGCAGGTTTGATGGAAAGGTAG

mRNA sequence

ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCAAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCGAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAATGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGCGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAATTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAACTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGTAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGTATTCTTCTGTGATAGAGACGTCTTTGTGGGAGTTGAATTACAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTTTATCTCATCAAGTTCAAGGATTTAAGGGAGCAGCCGCAGGTTTGATGGAAAGGTAG

Coding sequence (CDS)

ATGAACCTCCTCCTTCGCCTTTGCATTCAGCATTCATGGCGGTTGAATACTCATCATGGTAACCTCAGCCATTTTCTCCCTCTATCTCAAATCCAAAGCTATCCAGCTCCCAACCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCAAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCGAGTAAGAGGTTGAAATCCAGCCTCAAACCTACACTGGACGAAACCCAATTTCAGTTGGCAGTTTCTCGAATCCCTCCAAGGTTTACCTCCGAAGAACTTTGTAATGTCATTTCTCTCCAGGGAAATCCTTTGGTGTGTTTTGAGCTGTTCAACTGGGCTTCACAACAGCCTCGTTTCAGACATGATGTTTCCACTTATCAGATTACAATTAAGAAGCTGGGCGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAATTTGAACTGTAGGCCTTCAATTAGAACATATAATCTACTTTTTACTGCATTCTTGAGTCGTGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAACTGTATGATAAAAGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCACCAAATGGGTGTTGTGTATAACTGCTTACCAAATTCATTTTCCTATGACTATTTGATTCACGGGTTATGCGCCCAAGGGCGAACAGATAATGCAAGGGAGTTGTGCAAGGAAATGAAGGAAAAGGGGTTTATGCCTAGTAGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAGTAGAAGATCTCCTGATTTTATTACATATAGGACTGTATTGGATGAGCTGTGTAGACAAGGGAGGGTCGTAGAAGCGACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGTATTCTTCTGTGATAGAGACGTCTTTGTGGGAGTTGAATTACAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTTTATCTCATCAAGTTCAAGGATTTAAGGGAGCAGCCGCAGGTTTGATGGAAAGGTAG

Protein sequence

MNLLLRLCIQHSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSLLRELQEKDLVDGHTYRKLLYVYSSVIETSLWELNYKISSPKEACDPFMPLSHQVQGFKGAAAGLMER
Homology
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BLAST of CcUC03G044670 vs. NCBI nr
Match: XP_038893505.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 728.0 bits (1878), Expect = 4.8e-206
Identity = 360/390 (92.31%), Postives = 373/390 (95.64%), Query Frame = 0 

Query: 3   LLLRLCIQHSWRLN-THHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRR 62
           L LR    HSW LN  +HGN++HFLP SQI+S+PAPNL FTKFCLNFYSNRAPSRSFRRR
Sbjct: 28  LCLRRFSIHSWWLNELNHGNITHFLPPSQIRSHPAPNLFFTKFCLNFYSNRAPSRSFRRR 87

Query: 63  ASKRLKSSLKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRF 122
           ASKRLKSS+KPTLD+TQFQ AVS+IPPRFTSEELCNVISLQG+PLVCFELFNWASQQPRF
Sbjct: 88  ASKRLKSSIKPTLDDTQFQSAVSQIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRF 147

Query: 123 RHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAIN 182
           RHDVSTY ITIKKLGEAKMYEEMDHVVNQVL+VPSIGSETLYNTMIYFFTEARKLTRAIN
Sbjct: 148 RHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIYFFTEARKLTRAIN 207

Query: 183 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPD 242
           IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPD
Sbjct: 208 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPD 267

Query: 243 IFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELC 302
           IFTLN MIKGYVLSLHINDALRIFHQMGVVY+CLPNSFSYDYLIHGLCAQGRTDNARELC
Sbjct: 268 IFTLNSMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELC 327

Query: 303 KEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQ 362
            EMKEKGF+PS ISYNSIVNAMALNGEVEEAVNYLWEMID+RRSPDFITYRTVLDE CRQ
Sbjct: 328 NEMKEKGFVPSGISYNSIVNAMALNGEVEEAVNYLWEMIDNRRSPDFITYRTVLDEQCRQ 387

Query: 363 GRVVEATSLLRELQEKDLVDGHTYRKLLYV 392
           GRV EATSLLRELQEKDLVDGHTYRKLLYV
Sbjct: 388 GRVGEATSLLRELQEKDLVDGHTYRKLLYV 417

[Close]
BLAST of CcUC03G044670 vs. NCBI nr
Match: XP_008463631.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463637.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463644.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo])

HSP 1 Score: 701.4 bits (1809), Expect = 4.8e-198
Identity = 345/382 (90.31%), Postives = 362/382 (94.76%), Query Frame = 0 

Query: 11  HSWRL-NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HS  L NTHH NL+HFL +SQIQ+YPAPNLSFTKFCLNFYS  APSRSFRRRA+KRLK+S
Sbjct: 38  HSLSLNNTHHCNLTHFLRVSQIQTYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKAS 97

Query: 71  LKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKPTLDE QFQLAVS+IPPRFT EEL NVISLQ +PLVCFELFNWASQQPRF+HDVS+Y+
Sbjct: 98  LKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINH+YMETIRCLFRQMVNDDGIEPDIF LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVY+CLPNS+SYDYLIHGL AQ RTDNARELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATS 370
           +PSSISYNSIVNAMALNGEVE+AVNYLWEMID RRSPDFITY+TVLDELCR GRVVEATS
Sbjct: 338 VPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYV 392
           LLRELQEKDLVDGHTYRKLLYV
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYV 419

[Close]
BLAST of CcUC03G044670 vs. NCBI nr
Match: XP_004147297.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sativus] >XP_031736112.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sativus] >XP_031736113.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sativus] >KGN64750.1 hypothetical protein Csa_013140 [Cucumis sativus])

HSP 1 Score: 698.0 bits (1800), Expect = 5.3e-197
Identity = 340/382 (89.01%), Postives = 360/382 (94.24%), Query Frame = 0 

Query: 11  HSWRL-NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HSW L NTHH NL HFL +SQI  Y  PNLSFT F L FYS  APSRSFR+RA+KRLKSS
Sbjct: 38  HSWWLNNTHHYNLPHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSS 97

Query: 71  LKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKP LDETQFQLAVS+IPPRFTSEELCNVISLQ +PLVCFELFNWASQQPRFRHD S+Y+
Sbjct: 98  LKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINHMYMETIRCLFRQMVNDDGIEPDIF+LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVY+CLPNS+S+DYLIHGLCAQ RTDNA+ELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATS 370
           +PSSISYNSIVNA+ALNGEVE+AVNYLWEMID+RRSPDFITY+TVLDELCRQG+VVEATS
Sbjct: 338 VPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYV 392
           LLRELQEKDLVDGHTYRKLLYV
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYV 419

[Close]
BLAST of CcUC03G044670 vs. NCBI nr
Match: XP_022970418.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970419.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970420.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970421.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 696.8 bits (1797), Expect = 1.2e-196
Identity = 344/381 (90.29%), Postives = 361/381 (94.75%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HS  LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSNRAPSRSFRRRASKRLKS +
Sbjct: 38  HSLLLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+S+IPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALR+FHQMGVVY+ LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCRQGRV EATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYV 392
           LRE+QEK+LVDGHTYRKLLYV
Sbjct: 398 LREVQEKELVDGHTYRKLLYV 417

[Close]
BLAST of CcUC03G044670 vs. NCBI nr
Match: KAG6583499.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 692.6 bits (1786), Expect = 2.2e-195
Identity = 344/390 (88.21%), Postives = 362/390 (92.82%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HSW LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSN APSRSFRRRASKRLKS +
Sbjct: 38  HSWFLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+S+IPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNK 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYIN MYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALRIFHQMGVVY+ LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCR+GRV EATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYVYSSVIETSL 401
           LRE+QEK+LVDGHTYRKLLYV       SL
Sbjct: 398 LREVQEKELVDGHTYRKLLYVLEDDYGNSL 426

[Close]
BLAST of CcUC03G044670 vs. ExPASy Swiss-Prot
Match: Q9ZUY1 (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 459.9 bits (1182), Expect = 3.2e-128
Identity = 219/343 (63.85%), Postives = 276/343 (80.47%), Query Frame = 0 

Query: 49  YSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVC 108
           YS   P+RS RRR S R KSS KP L+ ++F   +S++PPRFT EEL + I+L+ +P +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 109 FELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIY 168
           F LFNWASQQPRF H+  +Y I I+KLG AKMY+EMD +VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 169 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 228
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 229 FRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGL 288
           FRQMV D GIEPD+F LNC++KGYVLSLH+NDALRIFHQM VVY+C PNSF+YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 289 CAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDF 348
           CAQGRT NAREL  EMK KGF+P+  SYNS+VNA AL+GE+++AV  LWEMI++ R  DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395

Query: 349 ITYRTVLDELCRQGRVVEATSLLRELQEKDLVDGHTYRKLLYV 392
           I+YRT++DE CR+G+  EAT LL  L+EK LVD  +Y KL+ V
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNV 437

[Close]
BLAST of CcUC03G044670 vs. ExPASy Swiss-Prot
Match: Q9LSF5 (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.7e-47
Identity = 110/354 (31.07%), Postives = 193/354 (54.52%), Query Frame = 0 

Query: 38  NLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSRIPPRFTSEELCN 97
           +LSF+    +  S+ +PSR   R            T  ETQF+  +  + P FT+ ++  
Sbjct: 33  SLSFSSVSSSPESHTSPSRIRTR------------TPLETQFETWIQNLKPGFTNSDVVI 92

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSI 157
            +  Q +P +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V+A    
Sbjct: 93  ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 152

Query: 158 GSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAY 217
            S  LYN +I F    + L  RA +++  M   R+ + +P + TY LL ++ L R     
Sbjct: 153 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLKRFNKLN 212

Query: 218 INHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLP 277
           + ++Y+  +R L +QM   +G+ PD F LN +IK Y   L +++A+R+F +M  +Y   P
Sbjct: 213 VCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-ALYGSEP 272

Query: 278 NSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYL 337
           N+++Y YL+ G+C +GR        KEM+ KG +P+   Y  ++ ++++   ++EAV  +
Sbjct: 273 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 332

Query: 338 WEMIDSRRSPDFITYRTVLDELCRQGRVVEATSLLRELQEKDLVDG-HTYRKLL 390
           ++M+ +  SPD +TY TVL ELCR GR  EA  ++ E +++D V G   YR L+
Sbjct: 333 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370

[Close]
BLAST of CcUC03G044670 vs. ExPASy Swiss-Prot
Match: Q9ZUU3 (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX=3702 GN=At2g37230 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.9e-28
Identity = 95/340 (27.94%), Postives = 164/340 (48.24%), Query Frame = 0 

Query: 59  RRRASKRLKSSLKPTLDE----TQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNW 118
           +R+  ++L+ ++   +D     T+ Q ++  + P +    + NV+          + F W
Sbjct: 80  KRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRW 139

Query: 119 ASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIG---SETLYNTMIYFFT 178
             +    RHD  T+   IK LGE     +++H    +L +P  G    E ++  +I  + 
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEV---SKLNHARCILLDMPEKGVPWDEDMFVVLIESYG 199

Query: 179 EARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQ 238
           +A  +  ++ IF+ M   ++L    +I++YN LF   L RGR       YM   R  F +
Sbjct: 200 KAGIVQESVKIFQKM---KDLGVERTIKSYNSLFKVILRRGR-------YMMAKR-YFNK 259

Query: 239 MVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQ 298
           MV+ +G+EP   T N M+ G+ LSL +  ALR F  M       P+  +++ +I+G C  
Sbjct: 260 MVS-EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM-KTRGISPDDATFNTMINGFCRF 319

Query: 299 GRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITY 358
            + D A +L  EMK     PS +SY +++        V++ +    EM  S   P+  TY
Sbjct: 320 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 379

Query: 359 RTVLDELCRQGRVVEATSLLRELQEKDLV--DGHTYRKLL 390
            T+L  LC  G++VEA ++L+ +  K +   D   + KLL
Sbjct: 380 STLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLL 403

[Close]
BLAST of CcUC03G044670 vs. ExPASy Swiss-Prot
Match: Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 5.0e-25
Identity = 75/279 (26.88%), Postives = 145/279 (51.97%), Query Frame = 0 

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVV--NQVLAVP 157
           +I+ Q +PL+  E+F++ASQQP FRH  S++ I I KLG  + +  +D V+  ++    P
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 158 SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNA 217
             G   ++  +I  + EA+   + ++ F  M      N  P  +  N +    +S     
Sbjct: 117 LTGE--IFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVS----- 176

Query: 218 YINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCL 277
             +  Y++    LF+      G+ P+  + N +++ + L+  ++ A ++F +M +  + +
Sbjct: 177 --HRGYLQKAFELFKSS-RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVV 236

Query: 278 PNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNY 337
           P+  SY  LI G C +G+ + A EL  +M  KGF+P  +SY +++N++    ++ EA   
Sbjct: 237 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 296

Query: 338 LWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSLLREL 375
           L  M     +PD + Y T++   CR+ R ++A  +L ++
Sbjct: 297 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321

[Close]
BLAST of CcUC03G044670 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.6e-25
Identity = 76/248 (30.65%), Postives = 121/248 (48.79%), Query Frame = 0 

Query: 132 IKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRN 191
           I KL EA+  E    ++ Q +   ++    +Y T+I  F +   +  A   F  M +   
Sbjct: 329 ICKLAEAE--EAFSEMIRQGILPDTV----VYTTLIDGFCKRGDIRAASKFFYEMHSR-- 388

Query: 192 LNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKG 251
            +  P + TY  + + F   G       ++ E   C         G+EPD  T   +I G
Sbjct: 389 -DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-C--------KGLEPDSVTFTELING 448

Query: 252 YVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMP 311
           Y  + H+ DA R+ + M +   C PN  +Y  LI GLC +G  D+A EL  EM + G  P
Sbjct: 449 YCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 508

Query: 312 SSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSLL 371
           +  +YNSIVN +  +G +EEAV  + E   +  + D +TY T++D  C+ G + +A  +L
Sbjct: 509 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 557

Query: 372 RELQEKDL 380
           +E+  K L
Sbjct: 569 KEMLGKGL 557

[Close]
BLAST of CcUC03G044670 vs. ExPASy TrEMBL
Match: A0A1S3CJQ6 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501729 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.3e-198
Identity = 345/382 (90.31%), Postives = 362/382 (94.76%), Query Frame = 0 

Query: 11  HSWRL-NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HS  L NTHH NL+HFL +SQIQ+YPAPNLSFTKFCLNFYS  APSRSFRRRA+KRLK+S
Sbjct: 38  HSLSLNNTHHCNLTHFLRVSQIQTYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKAS 97

Query: 71  LKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKPTLDE QFQLAVS+IPPRFT EEL NVISLQ +PLVCFELFNWASQQPRF+HDVS+Y+
Sbjct: 98  LKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINH+YMETIRCLFRQMVNDDGIEPDIF LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVY+CLPNS+SYDYLIHGL AQ RTDNARELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATS 370
           +PSSISYNSIVNAMALNGEVE+AVNYLWEMID RRSPDFITY+TVLDELCR GRVVEATS
Sbjct: 338 VPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYV 392
           LLRELQEKDLVDGHTYRKLLYV
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYV 419

[Close]
BLAST of CcUC03G044670 vs. ExPASy TrEMBL
Match: A0A0A0LS50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.6e-197
Identity = 340/382 (89.01%), Postives = 360/382 (94.24%), Query Frame = 0 

Query: 11  HSWRL-NTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSS 70
           HSW L NTHH NL HFL +SQI  Y  PNLSFT F L FYS  APSRSFR+RA+KRLKSS
Sbjct: 38  HSWWLNNTHHYNLPHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSS 97

Query: 71  LKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQ 130
           LKP LDETQFQLAVS+IPPRFTSEELCNVISLQ +PLVCFELFNWASQQPRFRHD S+Y+
Sbjct: 98  LKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYE 157

Query: 131 ITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN 190
           ITIKKLGEAKMYEEMDHVVNQ LAV SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNN
Sbjct: 158 ITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNN 217

Query: 191 RNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMI 250
           RNLNCRPSIRTYNLLFTAFLSRGRN YINHMYMETIRCLFRQMVNDDGIEPDIF+LNCMI
Sbjct: 218 RNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMI 277

Query: 251 KGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGF 310
           KGYVLSLH+NDALRIFHQMGVVY+CLPNS+S+DYLIHGLCAQ RTDNA+ELC EMKEKGF
Sbjct: 278 KGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGF 337

Query: 311 MPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATS 370
           +PSSISYNSIVNA+ALNGEVE+AVNYLWEMID+RRSPDFITY+TVLDELCRQG+VVEATS
Sbjct: 338 VPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATS 397

Query: 371 LLRELQEKDLVDGHTYRKLLYV 392
           LLRELQEKDLVDGHTYRKLLYV
Sbjct: 398 LLRELQEKDLVDGHTYRKLLYV 419

[Close]
BLAST of CcUC03G044670 vs. ExPASy TrEMBL
Match: A0A6J1I0J8 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469407 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 5.7e-197
Identity = 344/381 (90.29%), Postives = 361/381 (94.75%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HS  LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSNRAPSRSFRRRASKRLKS +
Sbjct: 38  HSLLLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+S+IPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALR+FHQMGVVY+ LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCRQGRV EATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYV 392
           LRE+QEK+LVDGHTYRKLLYV
Sbjct: 398 LREVQEKELVDGHTYRKLLYV 417

[Close]
BLAST of CcUC03G044670 vs. ExPASy TrEMBL
Match: A0A6J1HKI7 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111464950 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.4e-195
Identity = 342/381 (89.76%), Postives = 360/381 (94.49%), Query Frame = 0 

Query: 11  HSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSL 70
           HSW LNT HGN SH L LSQIQ+YPAP LSFTKFCLNFYSN APSRSFRRRASKRLKS +
Sbjct: 38  HSWFLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRI 97

Query: 71  KPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQI 130
           KP L+E QFQ A+S+IPPRF SEEL NVIS+QG+PLVCFELFNWASQQ RFRHDVSTY+I
Sbjct: 98  KPKLNEAQFQHAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEI 157

Query: 131 TIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNR 190
           TIKKLGEAKMYEEMD+VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+
Sbjct: 158 TIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNK 217

Query: 191 NLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIK 250
           NLNCRPSIRTYNLLFTAFLSRGRNAYIN MYMETIRCLFRQMVN DGIEPDIFTLNCMIK
Sbjct: 218 NLNCRPSIRTYNLLFTAFLSRGRNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIK 277

Query: 251 GYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFM 310
           GYVLSLH+NDALRIFHQMGVVY+ LPNSFSYDYLIHGLCAQ RTDNARELC EMKEKGF+
Sbjct: 278 GYVLSLHVNDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFV 337

Query: 311 PSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSL 370
           PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRSPDFITY+TVLDELCR+GRV EATSL
Sbjct: 338 PSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSL 397

Query: 371 LRELQEKDLVDGHTYRKLLYV 392
           LRE+QEK+LVDGHTYRKLLYV
Sbjct: 398 LREVQEKELVDGHTYRKLLYV 417

[Close]
BLAST of CcUC03G044670 vs. ExPASy TrEMBL
Match: A0A6J1DY00 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024542 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.9e-192
Identity = 340/387 (87.86%), Postives = 361/387 (93.28%), Query Frame = 0 

Query: 5   LRLCIQHSWRLNTHHGNLSHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASK 64
           LR    HS  LN++HGN   FL LSQI++ P P +SFTKF LNF+S+RAPSRSFRRRASK
Sbjct: 29  LRTFSTHSSLLNSNHGNCRSFLLLSQIRNCPVPVVSFTKFRLNFFSSRAPSRSFRRRASK 88

Query: 65  RLKSSLKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHD 124
           RLKSS+KP+LDET FQ AVS+IPPRF+ EELCNVISLQ +P+VCFELFNWASQQPRFRHD
Sbjct: 89  RLKSSIKPSLDETLFQAAVSQIPPRFSPEELCNVISLQEDPMVCFELFNWASQQPRFRHD 148

Query: 125 VSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFK 184
           VSTY+ITIKKLGEAKM+EEMD VVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFK
Sbjct: 149 VSTYEITIKKLGEAKMFEEMDDVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFK 208

Query: 185 HMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFT 244
           HMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN DGIEPDIFT
Sbjct: 209 HMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVN-DGIEPDIFT 268

Query: 245 LNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEM 304
           LNCMIKGYVLSLHINDALRIFHQMGVVY+ LPNSFSYDYLIHGLCAQGRTDNARELC EM
Sbjct: 269 LNCMIKGYVLSLHINDALRIFHQMGVVYSSLPNSFSYDYLIHGLCAQGRTDNARELCNEM 328

Query: 305 KEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRV 364
           KEKGF+PSSISYNSIVNAMALNGEVEEAVNYLWEMI +RRS DF+TYRTVLDE+CRQGRV
Sbjct: 329 KEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSADFVTYRTVLDEMCRQGRV 388

Query: 365 VEATSLLRELQEKDLVDGHTYRKLLYV 392
            EAT+LLRELQEKDLVDGHTYRKL YV
Sbjct: 389 GEATNLLRELQEKDLVDGHTYRKLCYV 414

[Close]
BLAST of CcUC03G044670 vs. TAIR 10
Match: AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 459.9 bits (1182), Expect = 2.3e-129
Identity = 219/343 (63.85%), Postives = 276/343 (80.47%), Query Frame = 0 

Query: 49  YSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVC 108
           YS   P+RS RRR S R KSS KP L+ ++F   +S++PPRFT EEL + I+L+ +P +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 109 FELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIY 168
           F LFNWASQQPRF H+  +Y I I+KLG AKMY+EMD +VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 169 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 228
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 229 FRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGL 288
           FRQMV D GIEPD+F LNC++KGYVLSLH+NDALRIFHQM VVY+C PNSF+YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 289 CAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDF 348
           CAQGRT NAREL  EMK KGF+P+  SYNS+VNA AL+GE+++AV  LWEMI++ R  DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395

Query: 349 ITYRTVLDELCRQGRVVEATSLLRELQEKDLVDGHTYRKLLYV 392
           I+YRT++DE CR+G+  EAT LL  L+EK LVD  +Y KL+ V
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNV 437

[Close]
BLAST of CcUC03G044670 vs. TAIR 10
Match: AT5G27300.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 302.4 bits (773), Expect = 6.0e-82
Identity = 174/393 (44.27%), Postives = 228/393 (58.02%), Query Frame = 0 

Query: 23  SHFLPLSQIQSYPAPNLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLA 82
           S  LP SQI+      L+    C   YS   P+RS RRR S R KSS KP L+E++FQ  
Sbjct: 43  SSSLPQSQIEG----RLASVSMCTQ-YSTSVPTRSLRRRISSRKKSSTKPILNESKFQET 102

Query: 83  VSRIPPRFTSEELCNVISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYE 142
           +S++PPRFT EEL + I+L+ +P +CF LFNWASQQPRF H+  +Y I I+KLG AK   
Sbjct: 103 ISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK--- 162

Query: 143 EMDHVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYN 202
                                         + KL RA+NIF+HM N+RNL CRP++RTY+
Sbjct: 163 ------------------------------SGKLIRAVNIFRHMVNSRNLECRPTMRTYH 222

Query: 203 LLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDAL 262
           +LF A L RG N++INH+YMET+R LFRQMV D GIEPD+F LNC++K            
Sbjct: 223 ILFKALLGRGNNSFINHLYMETVRSLFRQMV-DSGIEPDVFALNCLVK------------ 282

Query: 263 RIFHQMGVVYNCLPNSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNA 322
                                        GRT N REL  EMK KGF+P+  SYNS+VNA
Sbjct: 283 -----------------------------GRTINTRELLSEMKGKGFVPNGKSYNSLVNA 342

Query: 323 MALNGEVEEAVNYLWEMIDSRRSPDFITYRTVLDELCRQGRVVEATSLLRELQEKDLVDG 382
            AL+GE+++AV  LWEMI++ R  DFI+YRT++DE CR+G+  EAT LL  L+EK LVD 
Sbjct: 343 FALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDI 355

Query: 383 HTYRK--------LLYVYSSVIETSLWELNYKI 408
            +  K        L+ ++SS++ +   E  Y I
Sbjct: 403 DSDDKLKMYQMVILVLLFSSMLPSVCDESRYMI 355

[Close]
BLAST of CcUC03G044670 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 298.9 bits (764), Expect = 6.7e-81
Identity = 166/367 (45.23%), Postives = 218/367 (59.40%), Query Frame = 0 

Query: 49  YSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSRIPPRFTSEELCNVISLQGNPLVC 108
           YS   P+RS RRR S R KSS KP L+E++FQ  +S++PPRFT EEL + I+L+ +P +C
Sbjct: 89  YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148

Query: 109 FELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIGSETLYNTMIY 168
           F LFNWASQQPRF H+  +Y I I+KLG AK                             
Sbjct: 149 FHLFNWASQQPRFTHENCSYHIAIRKLGAAK----------------------------- 208

Query: 169 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 228
               + KL RA+NIF+HM N+RNL CRP++RTY++LF A L RG N++INH+YMET+R L
Sbjct: 209 ----SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 268

Query: 229 FRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGL 288
           FRQMV D GIEPD+F LNC++K                                      
Sbjct: 269 FRQMV-DSGIEPDVFALNCLVK-------------------------------------- 328

Query: 289 CAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDF 348
              GRT N REL  EMK KGF+P+  SYNS+VNA AL+GE+++AV  LWEMI++ R  DF
Sbjct: 329 ---GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 380

Query: 349 ITYRTVLDELCRQGRVVEATSLLRELQEKDLVDGHTYRK--------LLYVYSSVIETSL 408
           I+YRT++DE CR+G+  EAT LL  L+EK LVD  +  K        L+ ++SS++ +  
Sbjct: 389 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDIDSDDKLKMYQMVILVLLFSSMLPSVC 380

[Close]
BLAST of CcUC03G044670 vs. TAIR 10
Match: AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 3.3e-48
Identity = 110/354 (31.07%), Postives = 193/354 (54.52%), Query Frame = 0 

Query: 38  NLSFTKFCLNFYSNRAPSRSFRRRASKRLKSSLKPTLDETQFQLAVSRIPPRFTSEELCN 97
           +LSF+    +  S+ +PSR   R            T  ETQF+  +  + P FT+ ++  
Sbjct: 33  SLSFSSVSSSPESHTSPSRIRTR------------TPLETQFETWIQNLKPGFTNSDVVI 92

Query: 98  VISLQGNPLVCFELFNWASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSI 157
            +  Q +P +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V+A    
Sbjct: 93  ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 152

Query: 158 GSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAY 217
            S  LYN +I F    + L  RA +++  M   R+ + +P + TY LL ++ L R     
Sbjct: 153 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLKRFNKLN 212

Query: 218 INHMYMETIRCLFRQMVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLP 277
           + ++Y+  +R L +QM   +G+ PD F LN +IK Y   L +++A+R+F +M  +Y   P
Sbjct: 213 VCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-ALYGSEP 272

Query: 278 NSFSYDYLIHGLCAQGRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYL 337
           N+++Y YL+ G+C +GR        KEM+ KG +P+   Y  ++ ++++   ++EAV  +
Sbjct: 273 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 332

Query: 338 WEMIDSRRSPDFITYRTVLDELCRQGRVVEATSLLRELQEKDLVDG-HTYRKLL 390
           ++M+ +  SPD +TY TVL ELCR GR  EA  ++ E +++D V G   YR L+
Sbjct: 333 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370

[Close]
BLAST of CcUC03G044670 vs. TAIR 10
Match: AT2G37230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-29
Identity = 95/340 (27.94%), Postives = 164/340 (48.24%), Query Frame = 0 

Query: 59  RRRASKRLKSSLKPTLDE----TQFQLAVSRIPPRFTSEELCNVISLQGNPLVCFELFNW 118
           +R+  ++L+ ++   +D     T+ Q ++  + P +    + NV+          + F W
Sbjct: 80  KRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRW 139

Query: 119 ASQQPRFRHDVSTYQITIKKLGEAKMYEEMDHVVNQVLAVPSIG---SETLYNTMIYFFT 178
             +    RHD  T+   IK LGE     +++H    +L +P  G    E ++  +I  + 
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEV---SKLNHARCILLDMPEKGVPWDEDMFVVLIESYG 199

Query: 179 EARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQ 238
           +A  +  ++ IF+ M   ++L    +I++YN LF   L RGR       YM   R  F +
Sbjct: 200 KAGIVQESVKIFQKM---KDLGVERTIKSYNSLFKVILRRGR-------YMMAKR-YFNK 259

Query: 239 MVNDDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYNCLPNSFSYDYLIHGLCAQ 298
           MV+ +G+EP   T N M+ G+ LSL +  ALR F  M       P+  +++ +I+G C  
Sbjct: 260 MVS-EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM-KTRGISPDDATFNTMINGFCRF 319

Query: 299 GRTDNARELCKEMKEKGFMPSSISYNSIVNAMALNGEVEEAVNYLWEMIDSRRSPDFITY 358
            + D A +L  EMK     PS +SY +++        V++ +    EM  S   P+  TY
Sbjct: 320 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 379

Query: 359 RTVLDELCRQGRVVEATSLLRELQEKDLV--DGHTYRKLL 390
            T+L  LC  G++VEA ++L+ +  K +   D   + KLL
Sbjct: 380 STLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLL 403

The following BLAST results are available for this feature:
BLAST of CcUC03G044670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893505.14.8e-20692.31pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Benin... [more]
XP_008463631.14.8e-19890.31PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... [more]
XP_004147297.15.3e-19789.01pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sa... [more]
XP_022970418.11.2e-19690.29pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
KAG6583499.12.2e-19588.21Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
BLAST of CcUC03G044670 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZUY13.2e-12863.85Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... [more]
Q9LSF54.7e-4731.07Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop... [more]
Q9ZUU34.9e-2827.94Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX... [more]
Q8LDU55.0e-2526.88Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
Q0WVK78.6e-2530.65Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
BLAST of CcUC03G044670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CJQ62.3e-19890.31pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A0A0LS502.6e-19789.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1[more]
A0A6J1I0J85.7e-19790.29pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A6J1HKI71.4e-19589.76pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A6J1DY001.9e-19287.86pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordic... [more]
BLAST of CcUC03G044670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27800.12.3e-12963.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G27300.26.0e-8244.27pentatricopeptide (PPR) repeat-containing protein [more]
AT5G27300.16.7e-8145.23pentatricopeptide (PPR) repeat-containing protein [more]
AT3G25210.13.3e-4831.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G37230.13.5e-2927.94Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 314..347
e-value: 5.3E-4
score: 18.0
coord: 279..312
e-value: 1.7E-7
score: 29.0
coord: 349..379
e-value: 9.3E-5
score: 20.4
coord: 162..189
e-value: 0.0023
score: 16.0
coord: 243..277
e-value: 1.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 243..268
e-value: 0.023
score: 14.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 276..323
e-value: 4.7E-11
score: 42.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 345..373
e-value: 2.9E-7
score: 30.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 163..208
e-value: 2.1E-4
score: 21.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 9.909073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..311
score: 12.682281
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 9.88715
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 307..400
e-value: 6.0E-17
score: 63.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 219..306
e-value: 1.2E-19
score: 72.5
coord: 60..218
e-value: 1.8E-17
score: 65.5
NoneNo IPR availablePANTHERPTHR47932:SF23PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEINcoord: 44..394
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 44..394

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G044670.1CcUC03G044670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051641 cellular localization
cellular_component GO:0031083 BLOC-1 complex
molecular_function GO:0005515 protein binding