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CcUC03G043760 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAAAAGAAGTGATAGTTATTTGTTATTAGTGTAAAGTGGGAAAGACAATAAATAATCTCCCCTGTTTCTAACGTCCTCTTTCCCGTTTCTTCCTTCCTTCTTCTTCCCCCAAACCCCCAACCCACATGTCTGCTTCTGGAACTTCGTTTCCGGACCCCGACTGGCCCCGTCAAGATCCGACCCGACCCGAATTACCTTTCTCCCACCACCTACCCCCGGACCCTCTCCTCGACGCCGGCTCCTTCATCGACTCCTCCACCGTCCCATCCCGAACCCTACCTTCTTCTCCTCCCAACCACGCCCGAGATCTTGACCGGACTCCTCGCAAGAAATCCGATACTTCTTCCACTCGCCGATCTCCATTTCGTGCCCAGCCTCTCAACTCTTACAATCTCCCTTCCGATTCTCCGGCTCCCAGGAATGGAGATTCTCCCGCATCCAAGAAGGTCTCAGCCTCTACCTCCCGAGGAACCGACGCCTCCTCCAAATCTGCCTTGTCCGAGAGGCCTAATTGGCTGCCCCCGGGCTGGGTTGTTGAAGATAGAGTTCGTTCCTCTGGTGCTACAGCTGGAACTGTCGATAAGGTGAATTGAATCTTTCTTTTATCTCTTTTAATCTTGACTTCCTTCCTCTTGACTTCCTTCCTCTTTACTGCCGTTTCCTGTTCCAAGTGGAGATAAATTTTTGTTTTGGTAATTAATTGACCATGCAACTAGTACTCTATTCCATGCCTCACGCTACTGAACTTCACTGGATGACTGATGATAGAACAGAGGTTTACCGTTGCTGGAACTACTTTCCTTCTACTTATGAATGATTTCTGTGATACCTTTACTACGTTTGGAACTAAGGATTAACACATGAACCAATTGGGAAGAAGTTATCTTATCATTGTGCTACTGAAAATGATCTTTTGTTTGTATTGTAGTACCAAGTACCATTCCCTTGTCTGTTGTTAACTCATCAATTTTCGGGGAAATGAGGTCTATCAAGTAGATAAGGGTTTAATAACTACTCTGGATGTGATCATCTGAAAAATGGATCACTAGCGAAAAATTCGGTGCAATGTTGATGGGAATTGCAGTTTTAGTTACCTGATTGGGAATGAAGAAGTTCCTTAGGAACAATTGAACTATAGGAATTCATTTCATTCTCATGATCAGGCTCTTCCTCTCTCGATAAATTTGTTTGTCCTTTACTTGGTGTATAGTATTTGAGTACGTTTTGGTGCACGCTTTTGTATGAGCTCATTTAACAATCCATGCAATTCTGTCATGCAGTTAATGTAACAAGTCTTCTTGGTCCTTTTCTTTGGATGGTGAACAAGCCTCGATGAACTTTGATATATATTTATTTGGATTTTGGTACACTCTAGTTAGCTACTTCCCGTTTATATGAATTCAATTAGGACAACAGAGTTCGGTTGATTAGAATGAAGACCATGATTGGGAAAAGAATAACAAAAACCTCCAATGTTATGTTGATAACCAGTCCATAAACGGTGAGGATCAAATTTGTATGATAGTGTTGATTATTTGACTTCTCCATGCATGTTGATGAATAGATTTGAACTCGATACTTGGACTCTTGTATGAATTGTGCAGCTTATAGGAGTAGGATATGTGACTAGTGCTTGGTGCTTGATATATGATGCTTCCCTAGAAGTCATGTTTGAGATGGGACTGCACCTCAATTTCATATTCTTCATTTTCCCTGTTTAAAACTACATTGGGATTGTTGATAGACAAAACAAGCAAAAGCAATTTAAGTACAGTTTACAAGTACCATATAGCAATTATTGAGAACCGAGTTTGAGTGTCGTATGGAAATTGCTTATGAATTGAGTTCATGTCATGCTGAATTAATTGGGAGCATGCTTGGGCCCATTTATTTCTTGAGGCTCCCTTTCCTTGTTATCCTGTTTTAAATATTTATCAAACAAACAAACAGTAAAGAATGTCAAAAGAATCTAATCTATCCCCATGTCCCTTGCAGTACTACTTTGACCCAGTCTCAAACCGTCGATTCCGGTCTAAGATTGAGGTTCTTTACTTTCTGGAAACAGGAACATTAAGGAAACGGAAGAAATCATTAGATGGTAATCCAACGGTGAGTTGAAAGCTACCATTCCTTCTTTGGCACCCAATGGGATATTCCGATCTTCTCATCCATTTTTCAATTTTCCTGATTTGCAACTCTGCAGTCTACTGACGGTTCCGAAGAACCCAAGAGCAAGAAATCTTCCAGCAACACTAAAACTGCTCCTTTAGACTTTGATTTCTTCAATGTGCCTGAAAGGGTCGAATGGGTTCTCACAGACCCTTCTAAGGATGCTTGGACACCCTTTATCGACAAAGAGAAAGTACCCGAATATACTAAACGCGAATGGGTGGGAGCTTTTCAACTCCTTGGCCGATCGAAAGTTTGAAGGCAACTTCATCCCTTTTGGACATTTTTTGGGACAACCTATTCAGGCAAGAACCATCCTCCCTCCCTCCCTCCCTCCCTCTAACGGCTTCCCATCTGCAATTCTTTTGGTCTTTTTTTTTTCTTTGGAAGGAGCAGGTGAGGTTGAGGGGGAAGTGTTGTGAAAACCAGATTTGGTTGGGAAAAATTACTGCAAAAACATGACTCTATCTAACTGACTATGTCTTGGACTGGAAGAAGTGGTCAATTTGTGTAGAAGAGGGCTGCTCAGTTCATTCTCAATCAAAAGTATTTGAATGAGGGGCTATTTCATTTTGATTCTATGCTCTTGCTCTTCATTTTGATCTACGTCTGTATTTCTTTTATGATTCAAATATTTTTTTTGGGCAATTATATTGATGTTGCATAGAATCAATGAAAACTACCAATTCTAATGATAAAGACTAGAATTAGGAAGAAATTTATGGATTGAAATAAAAACAAAGTGGAAGAATTGTAGTTTGTCTGTTTTGCAAATCATGCCTCTATATTTTTAAGGGTGTAATTATTACTCTTAATTAAGACAACATTTCTTTTTCTTTTTTTAAAAAGGTTCAGAC GGGAAAAAGAAGTGATAGTTATTTGTTATTAGTGTAAAGTGGGAAAGACAATAAATAATCTCCCCTGTTTCTAACGTCCTCTTTCCCGTTTCTTCCTTCCTTCTTCTTCCCCCAAACCCCCAACCCACATGTCTGCTTCTGGAACTTCGTTTCCGGACCCCGACTGGCCCCGTCAAGATCCGACCCGACCCGAATTACCTTTCTCCCACCACCTACCCCCGGACCCTCTCCTCGACGCCGGCTCCTTCATCGACTCCTCCACCGTCCCATCCCGAACCCTACCTTCTTCTCCTCCCAACCACGCCCGAGATCTTGACCGGACTCCTCGCAAGAAATCCGATACTTCTTCCACTCGCCGATCTCCATTTCGTGCCCAGCCTCTCAACTCTTACAATCTCCCTTCCGATTCTCCGGCTCCCAGGAATGGAGATTCTCCCGCATCCAAGAAGGTCTCAGCCTCTACCTCCCGAGGAACCGACGCCTCCTCCAAATCTGCCTTGTCCGAGAGGCCTAATTGGCTGCCCCCGGGCTGGGTTGTTGAAGATAGAGTTCGTTCCTCTGGTGCTACAGCTGGAACTGTCGATAAGTACTACTTTGACCCAGTCTCAAACCGTCGATTCCGGTCTAAGATTGAGGTTCTTTACTTTCTGGAAACAGGAACATTAAGGAAACGGAAGAAATCATTAGATGGTAATCCAACGTCTACTGACGGTTCCGAAGAACCCAAGAGCAAGAAATCTTCCAGCAACACTAAAACTGCTCCTTTAGACTTTGATTTCTTCAATGTGCCTGAAAGGGTCGAATGGGTTCTCACAGACCCTTCTAAGGATGCTTGGACACCCTTTATCGACAAAGAGAAAGTACCCGAATATACTAAACGCGAATGGGTGGGAGCTTTTCAACTCCTTGGCCGATCGAAAGTTTGAAGGCAACTTCATCCCTTTTGGACATTTTTTGGGACAACCTATTCAGGCAAGAACCATCCTCCCTCCCTCCCTCCCTCCCTCTAACGGCTTCCCATCTGCAATTCTTTTGGTCTTTTTTTTTTCTTTGGAAGGAGCAGGTGAGGTTGAGGGGGAAGTGTTGTGAAAACCAGATTTGGTTGGGAAAAATTACTGCAAAAACATGACTCTATCTAACTGACTATGTCTTGGACTGGAAGAAGTGGTCAATTTGTGTAGAAGAGGGCTGCTCAGTTCATTCTCAATCAAAAGTATTTGAATGAGGGGCTATTTCATTTTGATTCTATGCTCTTGCTCTTCATTTTGATCTACGTCTGTATTTCTTTTATGATTCAAATATTTTTTTTGGGCAATTATATTGATGTTGCATAGAATCAATGAAAACTACCAATTCTAATGATAAAGACTAGAATTAGGAAGAAATTTATGGATTGAAATAAAAACAAAGTGGAAGAATTGTAGTTTGTCTGTTTTGCAAATCATGCCTCTATATTTTTAAGGGTGTAATTATTACTCTTAATTAAGACAACATTTCTTTTTCTTTTTTTAAAAAGGTTCAGAC ATGTCTGCTTCTGGAACTTCGTTTCCGGACCCCGACTGGCCCCGTCAAGATCCGACCCGACCCGAATTACCTTTCTCCCACCACCTACCCCCGGACCCTCTCCTCGACGCCGGCTCCTTCATCGACTCCTCCACCGTCCCATCCCGAACCCTACCTTCTTCTCCTCCCAACCACGCCCGAGATCTTGACCGGACTCCTCGCAAGAAATCCGATACTTCTTCCACTCGCCGATCTCCATTTCGTGCCCAGCCTCTCAACTCTTACAATCTCCCTTCCGATTCTCCGGCTCCCAGGAATGGAGATTCTCCCGCATCCAAGAAGGTCTCAGCCTCTACCTCCCGAGGAACCGACGCCTCCTCCAAATCTGCCTTGTCCGAGAGGCCTAATTGGCTGCCCCCGGGCTGGGTTGTTGAAGATAGAGTTCGTTCCTCTGGTGCTACAGCTGGAACTGTCGATAAGTACTACTTTGACCCAGTCTCAAACCGTCGATTCCGGTCTAAGATTGAGGTTCTTTACTTTCTGGAAACAGGAACATTAAGGAAACGGAAGAAATCATTAGATGGTAATCCAACGTCTACTGACGGTTCCGAAGAACCCAAGAGCAAGAAATCTTCCAGCAACACTAAAACTGCTCCTTTAGACTTTGATTTCTTCAATGTGCCTGAAAGGGTCGAATGGGTTCTCACAGACCCTTCTAAGGATGCTTGGACACCCTTTATCGACAAAGAGAAAGTACCCGAATATACTAAACGCGAATGGGTGGGAGCTTTTCAACTCCTTGGCCGATCGAAAGTTTGA MSASGTSFPDPDWPRQDPTRPELPFSHHLPPDPLLDAGSFIDSSTVPSRTLPSSPPNHARDLDRTPRKKSDTSSTRRSPFRAQPLNSYNLPSDSPAPRNGDSPASKKVSASTSRGTDASSKSALSERPNWLPPGWVVEDRVRSSGATAGTVDKYYFDPVSNRRFRSKIEVLYFLETGTLRKRKKSLDGNPTSTDGSEEPKSKKSSSNTKTAPLDFDFFNVPERVEWVLTDPSKDAWTPFIDKEKVPEYTKREWVGAFQLLGRSKV Homology
BLAST of CcUC03G043760 vs. NCBI nr
Match: XP_038893740.1 (LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing protein 6 [Benincasa hispida]) HSP 1 Score: 442.2 bits (1136), Expect = 3.2e-120 Identity = 230/270 (85.19%), Postives = 246/270 (91.11%), Query Frame = 0
BLAST of CcUC03G043760 vs. NCBI nr
Match: XP_022948610.1 (methyl-CpG-binding domain-containing protein 5-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 407.5 bits (1046), Expect = 8.7e-110 Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of CcUC03G043760 vs. NCBI nr
Match: XP_023523162.1 (methyl-CpG-binding domain-containing protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406.0 bits (1042), Expect = 2.5e-109 Identity = 214/265 (80.75%), Postives = 226/265 (85.28%), Query Frame = 0
BLAST of CcUC03G043760 vs. NCBI nr
Match: XP_022998335.1 (methyl-CpG-binding domain-containing protein 5-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 405.6 bits (1041), Expect = 3.3e-109 Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of CcUC03G043760 vs. NCBI nr
Match: XP_022948611.1 (methyl-CpG-binding domain-containing protein 5-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108 Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy Swiss-Prot
Match: Q9SNC0 (Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=MBD5 PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.3e-27 Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy Swiss-Prot
Match: Q9LTJ1 (Methyl-CpG-binding domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=MBD6 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.6e-27 Identity = 82/239 (34.31%), Postives = 124/239 (51.88%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy Swiss-Prot
Match: Q9Z2E1 (Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 GN=Mbd2 PE=2 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04 Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy Swiss-Prot
Match: Q9UBB5 (Methyl-CpG-binding domain protein 2 OS=Homo sapiens OX=9606 GN=MBD2 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 5.1e-04 Identity = 30/79 (37.97%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy TrEMBL
Match: A0A6J1GAC7 (methyl-CpG-binding domain-containing protein 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452236 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 4.2e-110 Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy TrEMBL
Match: A0A6J1KC76 (methyl-CpG-binding domain-containing protein 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493004 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109 Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy TrEMBL
Match: A0A6J1G9P7 (methyl-CpG-binding domain-containing protein 5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452236 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 6.0e-109 Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy TrEMBL
Match: A0A5D3BC42 (Methyl-CpG-binding domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002210 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.0e-108 Identity = 218/276 (78.99%), Postives = 226/276 (81.88%), Query Frame = 0
BLAST of CcUC03G043760 vs. ExPASy TrEMBL
Match: A0A6J1K9Z4 (methyl-CpG-binding domain-containing protein 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493004 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.0e-108 Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of CcUC03G043760 vs. TAIR 10
Match: AT3G46580.1 (methyl-CPG-binding domain protein 5 ) HSP 1 Score: 123.2 bits (308), Expect = 3.0e-28 Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 0
BLAST of CcUC03G043760 vs. TAIR 10
Match: AT5G59380.1 (methyl-CPG-binding domain 6 ) HSP 1 Score: 122.9 bits (307), Expect = 4.0e-28 Identity = 82/239 (34.31%), Postives = 124/239 (51.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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