CcUC03G042890 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G042890
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionran-binding protein 1 homolog a
LocationCicolChr03: 577687 .. 581608 (-)
RNA-Seq ExpressionCcUC03G042890
SyntenyCcUC03G042890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAGAGCAAATAGAGAACTTTTTATGTAATTTGAGGGTTCATCTTCATTGTCACTCATTTTTTTCACTCCCACTTCACCCATATATAAACCCTAGTTTCTCCCAATTCCGATCCATTTCTTCCAATCTCACCTCACCTTCCACATTCTCAACCAAACCCTAAACCCTCTTCCATGGCGAGCAACGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGTATGCTTTTCTCTTTACTTCTTTATCTGATCTGCTCAATCTAGGTTTTAATCTTATTTTCTTCATGTGGGTTATTCGTATTCGTTGTTTTAGGAAATCCAAACTGTACCGATTCGACAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATTTAGGTTCGTCCTCAGTTCACTACTTGTTCCTTCGCGTATATATCAAGCTTCTTTGAGTTAATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTCTTCTTGATTTAGCTTTAGTTCTTCCCTCTTATCGTTTGATTTGTCGTGATTGTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGCATCAGATTCCCATCTATTGATAGTGAGTACAACTCTGAATCTTTTTTCTCTCTAAATCTTGGCTATAGATTGACTGAAAGACTCTTCTAGACTTTGGAAATATTGATATCTGGTAGTGGGCAATATTAGTGTTAAAAATGAATCTTTATATTGTTTCACGTTTTGTGTTTTCTTTTCCCCTTCGGGATAAATTATATGTGAGTGCTCTCTAGTTGTGTGGTTGTGTCCGGTTCCAAGTATCACTAGGATAATTCTTTTCATTGACAATCTAATCTTATTCGTTTTCTTGTTGTTTTGTATCTGCTTTTTATGCAGTTTGGTTTGTACAGTTTTTCATCATAAGAAATTACAGTATTGTCGTGGTATGTTTTAAGTTGAACGTTTTCCTGATGCCTATCAATACTTAGTGCTATTAGAAATTGAAGAATGGGATTTATTCTTAAAATCCATTGTATAGTTTTCATCCGTACATAATGGTAACTTTGTCCTTGACACTTCTACTTCTCTGCTTATTTTTACTGATTATTGACTCTATCCATGAATATATTTCTTTTTACTTTCATTTACATTTGTTTTCTCTACTAAAAAAATAGGAAGTTTACTATTCCTAGATCCATCTCTGTTAATCTGCACAGTTTCTTCAGCTATCTAATTCTCTACATGTTCACATTGTATGCCAGTTGTTTTGGCAATGGAAGAGTTGGAGTCTGTTCCTGAATGGCAGAAGTATTATATAGAGTTGCAATTCTATATAATGATAATTCGATAATAAAATTTGATAGGAAAAAGTAGGTGAAAGTTGAGTGGTTTCTTTGGTGAATAGTCGGTTGTAAGCTTACTTCAGAGGATTTTAATTGATGATACCTAGAAGAAAAAAGCTGAAAGACAGTAATGGTACGAATGGAAATTTCCCAGTTAACAATTATCTGTGGCTGCTGTTGCCCTTTGAGGTGTGTAATTGGTACATCGGATATGTTCTGGGTTTTCATCCTTAAATGCAGTGGACCTCTCTGCACGGGATACATCAAAACTGTTCGATGTAGCTTAGGTGTTGTAATTTTATTTAGAACTCCCTCTCCATGCATCACAAGCTTTCAATGATGTCTCCGATGACTATTAGTCCAAATTTGTCTAGGAATTAGGTTCTTTATCATTGTAACTCTCAATAAGGTAGATAAACCTGGATAAATAGACGTCATCCAACAGAGTGATCCAGTTCTTTCCCTTTCTTAGGGGTGGTGAGTGATGAAGCCTTTTGAATTAATTTAAGCATCATCTCTGCCAGGGCTTCATATCTTTGTGTCAGCTAGGAACTCAATCTATGACTTCTAACTCAAGTCATGGGTATTGCAGAAATCTTTTATTTGTTTGTGTTTTTGTTGTTACTAAATTATCAATCTAACAACATAGGATGTTGGATTAGTTTCTTCATACTATAGACTGCAAAACCCTCATGGAAACATTCCTAGAAGTCCTCTAGTCCCAAAAGATAGATAGTTTCTTTTGAACTGTGCTAATCAGGTTTTTTTGGGATGTCTTAGAAAATAAAAAAATTGCTGAAAATAATTACAAATATAGCAAAATTTTACTTTCTATCCATGATAGACCGCGATAGACTCAGATAAACATCTATTGCTTTACCAGATAGACACGAATAGATGTCTATTTGGGTCTATCGCGGTCTATCACAGATAGAAAGTGAAATTTTGCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTCCTTTTTTTCCATTGGTTATTTACTTGATCATTATTAATTCTTTTTTGGGTATTATTAGATTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCGGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGGAGCAGCTGGTCTACTTGAAAAGTTGAGCGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAGGACACACCTGCAAAACCTAAGGAAGAGGATAAGCCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAGGAGCAGAGCCTGTTTCCCCTGCCAGATATATACGGTAGGATTTAGCTCTACCTCTACCGGATACGTCTCATTCATCCATGTCTTGGTACATTAAAACACAGTCAATTCTTGGATTGGGTAACTTTTCTGGGCTGGAAAGTTAAGAGTTGTCTAAATTGTATGTTCGTTGGTCGGTCGGTTGGGGAGTCGTTTTCTATTGTTCTCCTTCCTTTCCTTTCAAAATGAGATTGATTTGTAGTCTGTCAAATGGTTGGTAGTGTGGTGATGGCCGTTTGTGAATCCTCAGAGTCAAATAGCATTTTTAGAAACCATAAAGTTTGTTTGCAGGGAGGGCCTGAGCTGAAGATGCTGCAGAGGGTGGGTTGGGTTAGTACCCAAACAAGAATATTTGCAGAGACATATATACTTCTTTTTGCTTCTTTTTTCTTGAGGAAAACATGGTTGGTTGTCTTGTGGTCATATTTTATTATTTAAGTTCTAGCTCTATTCTATTGTGGAGTGTGCTTTCTCTTTTGGACTGCTTTCTATTTACCTCTGTTTTCTGGATATGGTTTGTAGTTTTGTATTTTGGATTGCTTCTTTCAGGGAGGCCATTGGTGTCTCTTTTTTTTTCTTGGGCGAG

mRNA sequence

AAAGAAGAGCAAATAGAGAACTTTTTATGTAATTTGAGGGTTCATCTTCATTGTCACTCATTTTTTTCACTCCCACTTCACCCATATATAAACCCTAGTTTCTCCCAATTCCGATCCATTTCTTCCAATCTCACCTCACCTTCCACATTCTCAACCAAACCCTAAACCCTCTTCCATGGCGAGCAACGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTCGACAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATTTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGCATCAGATTCCCATCTATTGATAATTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCGGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGGAGCAGCTGGTCTACTTGAAAAGTTGAGCGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAGGACACACCTGCAAAACCTAAGGAAGAGGATAAGCCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAGGAGCAGAGCCTGTTTCCCCTGCCAGATATATACGGTAGGATTTAGCTCTACCTCTACCGGATACGTCTCATTCATCCATGTCTTGGTACATTAAAACACAGTCAATTCTTGGATTGGGTAACTTTTCTGGGCTGGAAAGTTAAGAGTTGTCTAAATTGTATGTTCGTTGGTCGGTCGGTTGGGGAGTCGTTTTCTATTGTTCTCCTTCCTTTCCTTTCAAAATGAGATTGATTTGTAGTCTGTCAAATGGTTGGTAGTGTGGTGATGGCCGTTTGTGAATCCTCAGAGTCAAATAGCATTTTTAGAAACCATAAAGTTTGTTTGCAGGGAGGGCCTGAGCTGAAGATGCTGCAGAGGGTGGGTTGGGTTAGTACCCAAACAAGAATATTTGCAGAGACATATATACTTCTTTTTGCTTCTTTTTTCTTGAGGAAAACATGGTTGGTTGTCTTGTGGTCATATTTTATTATTTAAGTTCTAGCTCTATTCTATTGTGGAGTGTGCTTTCTCTTTTGGACTGCTTTCTATTTACCTCTGTTTTCTGGATATGGTTTGTAGTTTTGTATTTTGGATTGCTTCTTTCAGGGAGGCCATTGGTGTCTCTTTTTTTTTCTTGGGCGAG

Coding sequence (CDS)

ATGGCGAGCAACGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTCGACAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATTTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGCATCAGATTCCCATCTATTGATAATTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCGGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGGAGCAGCTGGTCTACTTGAAAAGTTGAGCGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAGGACACACCTGCAAAACCTAAGGAAGAGGATAAGCCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAG

Protein sequence

MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVEDEKKAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD
Homology
[Close]
BLAST of CcUC03G042890 vs. NCBI nr
Match: XP_008457357.1 (PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-binding protein 1 homolog a [Cucumis sativus] >KAA0060033.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa] >KGN65824.1 hypothetical protein Csa_023197 [Cucumis sativus] >TYJ97290.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa])

HSP 1 Score: 384.4 bits (986), Expect = 6.4e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]
BLAST of CcUC03G042890 vs. NCBI nr
Match: XP_038894876.1 (ran-binding protein 1 homolog a [Benincasa hispida])

HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102
Identity = 205/216 (94.91%), Postives = 208/216 (96.30%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAED-TPAKPKEEDKPEGEAGKSDAEKKD 216
           D  K+EDKAED TP K KEEDKPEGEA KSDAEKK+
Sbjct: 181 D--KSEDKAEDTTPVKSKEEDKPEGEAKKSDAEKKE 214

[Close]
BLAST of CcUC03G042890 vs. NCBI nr
Match: XP_023519267.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 201/218 (92.20%), Postives = 208/218 (95.41%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   K+EDKAEDTP K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKAEDKSEDKAEDTPVKSEEKDKPEGEAEKSDAEKKE 218

[Close]
BLAST of CcUC03G042890 vs. NCBI nr
Match: KAG6583353.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019122.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.5 bits (968), Expect = 7.8e-101
Identity = 201/218 (92.20%), Postives = 207/218 (94.95%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   KAEDKAED P K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 218

[Close]
BLAST of CcUC03G042890 vs. NCBI nr
Match: XP_022970593.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 201/218 (92.20%), Postives = 207/218 (94.95%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   KAEDKAE TP K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

[Close]
BLAST of CcUC03G042890 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.1e-79
Identity = 163/220 (74.09%), Postives = 185/220 (84.09%), Query Frame = 0 

Query: 1   MASNDT--ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFD 60
           MA+N+   E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSKLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCV 120
           KD NQWKERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEHVGNEKSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLS 180
           WHA DFADGELKDELFCIRF SI+NCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VED---EKKAEDKAEDT-PAKPKEEDKPEGEAGKSDAEKK 215
           VE+   E+K E KA +T   + K E+K E EA KS   KK
Sbjct: 181 VEETKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

[Close]
BLAST of CcUC03G042890 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-74
Identity = 150/209 (71.77%), Postives = 175/209 (83.73%), Query Frame = 0 

Query: 3   SNDTER--REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 62
           SN+ ER  R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 122
           G+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 182
           A DF+DGELKDELFCIRF S++NCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 D---EKKAEDKAEDTPAKPKEEDKPEGEA 207
           +   EKK  +KAE+       E+K   E+
Sbjct: 185 EKESEKKPVEKAEENKKSEAVEEKKTEES 213

[Close]
BLAST of CcUC03G042890 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.2e-73
Identity = 152/218 (69.72%), Postives = 175/218 (80.28%), Query Frame = 0 

Query: 1   MASNDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDK 60
           MAS + ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 ED---EKKAEDKAEDTPAKPKEEDKPEGEAGKSDAEKK 215
           E+   E+KA++  E  PAK  +E K E    K + EKK
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETKKE----KVEEEKK 214

[Close]
BLAST of CcUC03G042890 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = 0 

Query: 2   ASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDG 61
           AS + E++  E     E         PIVKL  V   T EE E     +++KL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH- 121
           ++WKERG G  + LKHKETGK RLVMR+ KTLK+CANHL++P M +  +VG+++S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
           A D ++GE   E F IRF + +N   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

[Close]
BLAST of CcUC03G042890 vs. ExPASy Swiss-Prot
Match: P41920 (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YRB1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 72/159 (45.28%), Postives = 103/159 (64.78%), Query Frame = 0 

Query: 5   DTERREEEEAPAGED--EDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGN 64
           D E  +EE    G+D  E       P+V LE+V V T EE+E+ +  +++KL+RFD D  
Sbjct: 42  DEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAK 101

Query: 65  QWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHAT 124
           +WKERG G  KFLK+K+T KVR++MR+ KTLKICANH++ P  T++ +VG+++S V+  T
Sbjct: 102 EWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACT 161

Query: 125 -DFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
            D A+GE +   F IRF S +N   F E F++  E  KK
Sbjct: 162 ADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200

[Close]
BLAST of CcUC03G042890 vs. ExPASy TrEMBL
Match: A0A5A7UVN5 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00850 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]
BLAST of CcUC03G042890 vs. ExPASy TrEMBL
Match: A0A0A0LXN6 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]
BLAST of CcUC03G042890 vs. ExPASy TrEMBL
Match: A0A1S3C5A9 (ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]
BLAST of CcUC03G042890 vs. ExPASy TrEMBL
Match: A0A6J1I4C6 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.9e-101
Identity = 201/218 (92.20%), Postives = 207/218 (94.95%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   KAEDKAE TP K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

[Close]
BLAST of CcUC03G042890 vs. ExPASy TrEMBL
Match: A0A6J1HKC3 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464892 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.2e-100
Identity = 200/222 (90.09%), Postives = 207/222 (93.24%), Query Frame = 0 

Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKH+ETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA-------EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA       EDKAEDTP K +E+ KPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKSEDKAEDTPVKSEEKGKPEGEAEKSDAEKKE 222

[Close]
BLAST of CcUC03G042890 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 3.6e-80
Identity = 163/220 (74.09%), Postives = 185/220 (84.09%), Query Frame = 0 

Query: 1   MASNDT--ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFD 60
           MA+N+   E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSKLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCV 120
           KD NQWKERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEHVGNEKSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLS 180
           WHA DFADGELKDELFCIRF SI+NCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VED---EKKAEDKAEDT-PAKPKEEDKPEGEAGKSDAEKK 215
           VE+   E+K E KA +T   + K E+K E EA KS   KK
Sbjct: 181 VEETKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

[Close]
BLAST of CcUC03G042890 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-75
Identity = 150/209 (71.77%), Postives = 175/209 (83.73%), Query Frame = 0 

Query: 3   SNDTER--REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 62
           SN+ ER  R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 122
           G+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 182
           A DF+DGELKDELFCIRF S++NCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 D---EKKAEDKAEDTPAKPKEEDKPEGEA 207
           +   EKK  +KAE+       E+K   E+
Sbjct: 185 EKESEKKPVEKAEENKKSEAVEEKKTEES 213

[Close]
BLAST of CcUC03G042890 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-74
Identity = 152/218 (69.72%), Postives = 175/218 (80.28%), Query Frame = 0 

Query: 1   MASNDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDK 60
           MAS + ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 ED---EKKAEDKAEDTPAKPKEEDKPEGEAGKSDAEKK 215
           E+   E+KA++  E  PAK  +E K E    K + EKK
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETKKE----KVEEEKK 214

[Close]
BLAST of CcUC03G042890 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 48.5 bits (114), Expect = 7.7e-06
Identity = 49/158 (31.01%), Postives = 73/158 (46.20%), Query Frame = 0 

Query: 33  EEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKF-LKHKETGKVRLVMRQSK 92
           ++V+V TGEENE A     S ++ + + G  WKERG G +K  +   E  K RLVMR   
Sbjct: 320 QDVSVETGEENEKAAFTADSVMFEYLEGG--WKERGKGELKVNISTTENRKARLVMRSKG 379

Query: 93  TLKICANHLVLPSMTV--QEHVGNEKSCVWHATDFADGELKDELFCIRFPSIDNCKTFME 152
             ++  N  + P M +   +  G   +CV   +D  DG        ++F       T +E
Sbjct: 380 NYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGL---STLALKFKD----PTVVE 439

Query: 153 TFQEVAESQKKKEENKDASGAAGLLEKLSVEDEKKAED 188
            F+ V E  K  + +  A  AA L    + E+   AED
Sbjct: 440 EFRAVIEEHKDSKPSV-AEAAAPL---KTPENSPSAED 464

The following BLAST results are available for this feature:
BLAST of CcUC03G042890 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008457357.16.4e-10393.61PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-bi... [more]
XP_038894876.12.4e-10294.91ran-binding protein 1 homolog a [Benincasa hispida][more]
XP_023519267.13.5e-10192.20ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo][more]
KAG6583353.17.8e-10192.20Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
XP_022970593.11.0e-10092.20ran-binding protein 1 homolog a-like [Cucurbita maxima][more]
BLAST of CcUC03G042890 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LMK75.1e-7974.09Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ... [more]
Q8RWG81.7e-7471.77Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ... [more]
P929853.2e-7369.72Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ... [more]
Q097171.2e-3044.38Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97... [more]
P419201.2e-3045.28Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATC... [more]
BLAST of CcUC03G042890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UVN53.1e-10393.61Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A0A0LXN63.1e-10393.61RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4... [more]
A0A1S3C5A93.1e-10393.61ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=... [more]
A0A6J1I4C64.9e-10192.20ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534... [more]
A0A6J1HKC33.2e-10090.09ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648... [more]
BLAST of CcUC03G042890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07140.13.6e-8074.09Pleckstrin homology (PH) domain superfamily protein [more]
AT2G30060.11.2e-7571.77Pleckstrin homology (PH) domain superfamily protein [more]
AT5G58590.12.3e-7469.72RAN binding protein 1 [more]
AT3G15970.17.7e-0631.01NUP50 (Nucleoporin 50 kDa) protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainSMARTSM00160ranbd_3coord: 26..154
e-value: 1.7E-41
score: 153.9
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 37..154
e-value: 1.5E-39
score: 135.0
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 25..160
score: 34.429565
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 9..172
e-value: 7.3E-54
score: 183.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..215
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 6..215
NoneNo IPR availablePANTHERPTHR23138:SF156RAN-BINDING PROTEIN 1 HOMOLOG C-LIKEcoord: 6..215
NoneNo IPR availableCDDcd13179RanBD_RanBP1coord: 23..156
e-value: 3.60902E-68
score: 203.569
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 24..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G042890.1CcUC03G042890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046907 intracellular transport
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005643 nuclear pore
molecular_function GO:0005096 GTPase activator activity