CcUC03G042830 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC03G042830
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTranscription termination factor MTERF2
LocationCicolChr03: 524830 .. 530833 (+)
RNA-Seq ExpressionCcUC03G042830
SyntenyCcUC03G042830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTATGGCCTCCTTCTTCTTCCCCATTCCCACCATTAATGGCTGCACTAAATCCTCTCCTCTCATCCCTCTCCACCGTTTCATCCTTCCTCAATCTCCCTCCTTCTTTCCTCTCAACTTTCGCCCCTTCTCTTCCCGCTTTCACTCCTTCCTCGCCTCTTCCCATTTCGTTCCTTTCGCCTCTACTTCCTCCGACGCTCTTCCCTTTTCCGATGGCCCTCCAGAAAAAGACCCACTCCATTCTCTGGCCGAGGCCCGACTCGCCGTTTCCGAGTATCTACAGCGTTTCGGGGTTTCGGAGGACGAATCTGTCTCCATCGCCTCCAATTCCCCTCGTTTCTTGAAGATGCTCGTTGATGGAGTTCGGGAATTGGACGAGACATCCATGTGGATTTCCTGGAGTAAGGAAGGAGAAGAACAGCCGTTGGCTGATGATTTTGGGTTTAAGGAAAAGGTGGCTTTGATGGCCATGGAGAAAGGTGATTATGGGAAGGTTGCTTTCTTGGAAAGCGTCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGTGAGATGCTCCCATCTCTCATTTATAAGGTAGGGCACTACTTTTGTTGTTCATTGTTTTAGAATTAATGCTAAATTTTCTTCGAATTAGCAATCTCTTTGTCCCGATATTTCCTATAGAAATACTCACAGTTGACTAATTAGCGGAATGCATGAAATTAGTTTCTGATTCGAACTGTCAGAGTTCTTCTTTACTTGAGTTGATATCTGTTTGCGGTGTAAAATTGAAGATTGATTCGCTCGCCGACGTTGGTTTATTTTTACATTTCCTCTTTAGGTAAAATATATGAAGGAACTCTTCTCTTCTGGCAGCGGTGATGGAAAGCTCTTAGGAAAATGTGCTCGTCGAATGATGACGAACTTGTCGATTCCTCCTGATGATGACGTGCAACAGACTTTATCCTTTTTTGAGAAGGTCTTGTAACAGTCTCGCCATACGTAGTTTTCAGTTCCAAAGTTTCCAATTTCAAAGTTGGAACTTATTTTTTTTTTTCTTGTTTCTGTTTCATTCATTTTTGGATTTTCATATCATGTGTTGTCTTTATTAATATTGTTACAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCAAATGAAGAATCCTTTCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAGTAGAATCCCATGTAAAGCCAATGGTAGAATTTCTTGAAAACATTGACATCCCTAAGGAACGCATGAGGAGTATATTTCTACTGTTTCCACCCGTCATTTTCTTCAATGCTGAAGTCCTCAAATCAAGGATACTGGCTTTTGAGGAGGTACTATTTCTTGCATTTACGTACTTATATACATACATGCACACACAATCACACAAGGGACATGTATACATCATTAAAGTAATTTGATAATAGGTATGAAGTACCACGCTCTGTTTAGGAGTTTGATGAAAGTTCCTAAAACAAGAAGAAACCCCGATATCCTTGAGAATTTTGAACACCAGAGCAAGGTCACCCTTGCTTGAGTATGAAATTATGACTTTAGGCCAAAGTTCATCTCTTTTATGTATGAAATTATTGCTTGAGTTCTTTTGAAAGACTGAAAATGCCGAAAATTTCTTGAATTATATTACCCCTTACTTTCAAATGGAAGGTGGTTACGTTTGTAATCGTCCTTGGCTCGAAAGCTTGACCTCCTCCTTTTCTATGGTTTCATTTTTTCTCAATGATTCTAGTTTCTTATTGACAAAAGAGTTCACCGTATAGTATGATGTTGTGTTGATATTTTCTCACTACTTTTAGTTTATCGCTATTTATTTATCCTGTAGGTTGGCATAGAAGTGACGGTGGTTGGTAAATTGTTGCTTAAATATCCATGGATTACGGCCAATTGCATCCAAGGCAACCTTAAACAGATTGTTTCTTTCTTTGAATTGGAGAAGGTACACCTTCTGTCTGGCCGTTTTACCTTGCTTGTACTAATTTGATTAATTGCATGTTTAAAACCCTAGGAATTGATATATAATTATGCTCATGAGCGCTATTGGTTGGTATTTTGAGTTTTAGCAGCTGCCAGCTGATGTTCTGACCATCCTAAATCTCATATTCTTATTTAAAGAATGACAATGTATCTTTTTGAAGTTGAGTGAAAATGGGCACATTGAAAATAAAAAAGCAGAGATGGTAGATTGGGCCTAAGTGCAACTTTCCTTGAGAAGGCTTCGATCGAGAATCTGTCCTTTAAAGGTTTTCTTTGGGAAGGAGCTCAAGTGAAAGGAGATACCACTTGGTAAACATTGGACCAACATTTGCATTGGAACTCTGTAATAAGAAATTTCTGCCATCTTGCAAAATGGCTATGGAAATTCTGGTTTGACAAAGAGGATTAATGGTAATCTCACTACAAGAAAGATGATTGATGGAGAAGAGTTGTGGCTAAATTTTGAACCACCAATCGTGGTTCTTGGCTGGTCACTTCCTTCAAACTTTCTATGTTCTCGAACAGGATTGGAGTTGTGGGAAATCATAGTTCTGTAAGCTTTCAGAATGATTTTTGGATTGGTAATGTACCCTTTTAAAGGCTTTCGTATGAATATTCTCTCTTTCCAATTGGAAAACCTCTTCTGTCGAAGACATTTGGAATCCCCTGCTCAAAAATGGGACCTCGACTATTGAAGTACTTTTTGGATGTGTTATCCTAAGATGTGCCTCTATCTCAAATTCGCTCACCCATCTCCGTCAGTTCTGTACAAATGGATACCCTACCTACAACAACCTTTTATTGAAAGATATTGTGAGCAAGAGTGTCTCAGAGAAACGTTTTTTCATCCTCCTAGCTTAGTCAACGCTTTGGTGAAGATTGTTGCACTCAAACGTTTTTGATCTCTGTCCTCCTTTCTTTGCCTCTGTGGTTTAAGCTACCCGATATCTTGTCTTCCTTCATCTTTGTGCTGTCCATTCATATCGTTATTGTTCTCCTTCCATCTCTGTCTTCCTTTGTTTTCTTTTTTGCTTTCCCGAGACAAAACTCGTACGGGGTGTTTGTTTGAAGGGTTGGGCTTCGATGGGTTAGACATCCTAAACTTAACCTTTGGAGTAAGGGTTTAACCTTTTCCCATGGGGTTTAGGGTTTATGGTTTATCTTTTCTTCTCTCTCTCTCAAAATAAAATTTAATGACTAGAATATTTTTAAATACTCTTCTCTCTCTTCTATATTTTTTTCCTCTTGGGGCTTTTTTTTGACTCAATAGTTTTCTTGATTGTCTCTTGGTGTAAATTATCACCATTTTTTTACAACTATAGTTTCTCTCTGCTTTTTATCCAATTGGAGAATTTTATGTAACTCTTTTGGCTTAGGGTTGAAGCCCTATCTTTTGTAGTTTCATACCATCAAATTGATTGTGCTTGGGCATGTGAAGATATAGTATACCAGATAGTTGTCCCATGAACATAGTACCTATATGAAGTTGAGACATGAACTGTGTAATCCAATGTTTTCAGTTTTCAAAATTTGGAATATAAATCATTGAAACAAGTGAAGTTTTAGGGCAAATATGGACTTATACCCCTAAAATTTGGGAGTTGTATCTATTAAGTTCCAAAACTAATAGTTGTATCAATTTAAACTCCAAACTTTAATAAAAACCAAAATTTGCTTAATCCATTGTGATTCATATATTTGACAACAAGAAATTGAATTTATATCACATACCAAACGTGCCTTTGCCTTTTGGTAAATGAGCGTGATTTTGTAGTAGGTGCCCTTTAAGCTATTGAAAAATCAAGTCTGTGCTAATATGACGAATGTGCAGCTTGTATATATGGAAAATCTCGTTTACTAGATGATATTTCATGACAGGTACCAAATGCAAGCATTATCAATGCAATCAGCAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTGCAATTGATGGTGGAGAGGTTTGGTGGGCTAGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATAGCCACAAGTCCCCAGATATTACTTCAAAAACCTCAAGAATTTCTTCAGGTTGGTACCTAGTATTATCTACCATTCTTTGTTGTATCCTGTATTGCAATCAATGTCAAGACAAATTCATGAATACTTTCATCGTTGTTATAGATGTATGTTCAGATCATAATGCTTCAATATGTACTCATTTACTTCAATATTCTTGTATTCTAGATATAGCAAACCAATTGTGTACGTCAATTTATTTCTCATCTGACTGCCATATAACTTGCTTGTTCTCTTGTTTTATGTTCTTATATTTATATTCCAATACTAATTAGAAAATGCTATGTCATTGTGAAATATGATGATATTCTCTCTAGGTTTTGAACTTTCAATTATAGGAAAAATTGCTAAAGCTAACCCTCGAACTATGTGGGTTATGAACTTACCATCACATCCTCCAACGTTCAATTTGATTAATCACCTTTATAAGTTTATGAAATTGTTGTAATTAAACTCTTTTTTTGAAAAATGGAAACGATACTGTGATTTTGTACAAATGACCCAAATTTGATATTGAAAGTATTGTTAGTCCTAAACGATGTTGTAATTAAACTCTTCAATATTGCAAAATGCACTAATTAGCTATGTTCAGTGTTTTTCCGTAAAGAGATGTTTGCTCAAGGTTGATCTAACAAATTTAATCTTTTAGTTTTTAACATTATAGTTTTCAAACTTTATAGGGTAAAAAAATATTAGGTTAAATTTACAAATTTATAGTTTAAGGGCTGATTTTTACCGGCCTTATAGTTCAAAAGTAGATTGTGCATTAAATTCTTGTAAGTAAGGGTGGTAGATCAAATTGAAAATTCGAGAGTGTGGTTGTAACAACCTCTACAACTTAGTGGTGGCTTTTTCAATTTTTTGGAAATTTTTATTGCTTGGGAGTTTCGGAAGTTTATAATTATAAGTGTGCAAATACAGGTCATTTCATTTTTTGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATAATTACTCGTTGCCCAGAAGTATCTGCAACTAGTGTTGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTCATCAGTATTGGTATTTCTAAGACTCATCTACCTCGTGCAATTAGAAAATATCCCGAGCTTCTTGTGTCTGACCCTGACAAAACCTTACTCCCGCGGTAATGGTCAGACTTCACTTTTGCGTATGTATGTGTTTTTGATGTGGTTCAATTGGTGGGCATAGCTTCCATGGATGAAGCCATAATTTTTTTGAGAAGGGCAAAAATTATACGCATTTTGAAAATACGTCTTTATGTTAAAAGTACTTTTAGCATATCTGCTGTGTCAAAACTGAAATTGTCCAGATGTAACATTTGAATAGGTTGCTAATTGAATCGCCTTGCAATTCAAAATTTCAGTTGCAAATCAAGACTTTTCTCACTTCACTATTTAGAAAATAGAAAAAGGAAGAATAATTTATCTACTTGCAAAGAATGTATAATTAATTAGATTATAAATAGAAGTTGAAAAGTTTTTATCTAAAATTATTGATATGAATCTTCACACTACACTACACTATTCTGTTCTATGATGTGATGGCCCAAATTTTAATAATGATCAAAACGTTTTGCAGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAGAGAGGGACATTGCCTTCATGGTTGGTAGATTCTCTCCTCTTCTGGGGTATACTATAGAGGAGGTATTGAGACCCAAACTAGATTTCCTTGTAAATATAATGGAGAAGCCAATAAAGGAAGTGGTCGACTATCCAAGGTACTTTAGCTATTCGCTGGAAAAGAAGATAATTCCAAGGTTCCGGGTGTTGAAGGCGATGAATGTAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTCATGGGCTACAAAGGAACGAAACATTTAAGTTCTTCACCCACTTAA

mRNA sequence

ATGGCAGCTATGGCCTCCTTCTTCTTCCCCATTCCCACCATTAATGGCTGCACTAAATCCTCTCCTCTCATCCCTCTCCACCGTTTCATCCTTCCTCAATCTCCCTCCTTCTTTCCTCTCAACTTTCGCCCCTTCTCTTCCCGCTTTCACTCCTTCCTCGCCTCTTCCCATTTCGTTCCTTTCGCCTCTACTTCCTCCGACGCTCTTCCCTTTTCCGATGGCCCTCCAGAAAAAGACCCACTCCATTCTCTGGCCGAGGCCCGACTCGCCGTTTCCGAGTATCTACAGCGTTTCGGGGTTTCGGAGGACGAATCTGTCTCCATCGCCTCCAATTCCCCTCGTTTCTTGAAGATGCTCGTTGATGGAGTTCGGGAATTGGACGAGACATCCATGTGGATTTCCTGGAGTAAGGAAGGAGAAGAACAGCCGTTGGCTGATGATTTTGGGTTTAAGGAAAAGGTGGCTTTGATGGCCATGGAGAAAGGTGATTATGGGAAGGTTGCTTTCTTGGAAAGCGTCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGTGAGATGCTCCCATCTCTCATTTATAAGGTAAAATATATGAAGGAACTCTTCTCTTCTGGCAGCGGTGATGGAAAGCTCTTAGGAAAATGTGCTCGTCGAATGATGACGAACTTGTCGATTCCTCCTGATGATGACGTGCAACAGACTTTATCCTTTTTTGAGAAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCAAATGAAGAATCCTTTCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAGTAGAATCCCATGTAAAGCCAATGGTAGAATTTCTTGAAAACATTGACATCCCTAAGGAACGCATGAGGAGTATATTTCTACTGTTTCCACCCGTCATTTTCTTCAATGCTGAAGTCCTCAAATCAAGGATACTGGCTTTTGAGGAGGTTGGCATAGAAGTGACGGTGGTTGGTAAATTGTTGCTTAAATATCCATGGATTACGGCCAATTGCATCCAAGGCAACCTTAAACAGATTGTTTCTTTCTTTGAATTGGAGAAGGTACCAAATGCAAGCATTATCAATGCAATCAGCAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTGCAATTGATGGTGGAGAGGTTTGGTGGGCTAGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATAGCCACAAGTCCCCAGATATTACTTCAAAAACCTCAAGAATTTCTTCAGGTCATTTCATTTTTTGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATAATTACTCGTTGCCCAGAAGTATCTGCAACTAGTGTTGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTCATCAGTATTGGTATTTCTAAGACTCATCTACCTCGTGCAATTAGAAAATATCCCGAGCTTCTTGTGTCTGACCCTGACAAAACCTTACTCCCGCGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAGAGAGGGACATTGCCTTCATGGTTGGTAGATTCTCTCCTCTTCTGGGGTATACTATAGAGGAGGTATTGAGACCCAAACTAGATTTCCTTGTAAATATAATGGAGAAGCCAATAAAGGAAGTGGTCGACTATCCAAGGTACTTTAGCTATTCGCTGGAAAAGAAGATAATTCCAAGGTTCCGGGTGTTGAAGGCGATGAATGTAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTCATGGGCTACAAAGGAACGAAACATTTAAGTTCTTCACCCACTTAA

Coding sequence (CDS)

ATGGCAGCTATGGCCTCCTTCTTCTTCCCCATTCCCACCATTAATGGCTGCACTAAATCCTCTCCTCTCATCCCTCTCCACCGTTTCATCCTTCCTCAATCTCCCTCCTTCTTTCCTCTCAACTTTCGCCCCTTCTCTTCCCGCTTTCACTCCTTCCTCGCCTCTTCCCATTTCGTTCCTTTCGCCTCTACTTCCTCCGACGCTCTTCCCTTTTCCGATGGCCCTCCAGAAAAAGACCCACTCCATTCTCTGGCCGAGGCCCGACTCGCCGTTTCCGAGTATCTACAGCGTTTCGGGGTTTCGGAGGACGAATCTGTCTCCATCGCCTCCAATTCCCCTCGTTTCTTGAAGATGCTCGTTGATGGAGTTCGGGAATTGGACGAGACATCCATGTGGATTTCCTGGAGTAAGGAAGGAGAAGAACAGCCGTTGGCTGATGATTTTGGGTTTAAGGAAAAGGTGGCTTTGATGGCCATGGAGAAAGGTGATTATGGGAAGGTTGCTTTCTTGGAAAGCGTCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGTGAGATGCTCCCATCTCTCATTTATAAGGTAAAATATATGAAGGAACTCTTCTCTTCTGGCAGCGGTGATGGAAAGCTCTTAGGAAAATGTGCTCGTCGAATGATGACGAACTTGTCGATTCCTCCTGATGATGACGTGCAACAGACTTTATCCTTTTTTGAGAAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCAAATGAAGAATCCTTTCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAGTAGAATCCCATGTAAAGCCAATGGTAGAATTTCTTGAAAACATTGACATCCCTAAGGAACGCATGAGGAGTATATTTCTACTGTTTCCACCCGTCATTTTCTTCAATGCTGAAGTCCTCAAATCAAGGATACTGGCTTTTGAGGAGGTTGGCATAGAAGTGACGGTGGTTGGTAAATTGTTGCTTAAATATCCATGGATTACGGCCAATTGCATCCAAGGCAACCTTAAACAGATTGTTTCTTTCTTTGAATTGGAGAAGGTACCAAATGCAAGCATTATCAATGCAATCAGCAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTGCAATTGATGGTGGAGAGGTTTGGTGGGCTAGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATAGCCACAAGTCCCCAGATATTACTTCAAAAACCTCAAGAATTTCTTCAGGTCATTTCATTTTTTGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATAATTACTCGTTGCCCAGAAGTATCTGCAACTAGTGTTGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTCATCAGTATTGGTATTTCTAAGACTCATCTACCTCGTGCAATTAGAAAATATCCCGAGCTTCTTGTGTCTGACCCTGACAAAACCTTACTCCCGCGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAGAGAGGGACATTGCCTTCATGGTTGGTAGATTCTCTCCTCTTCTGGGGTATACTATAGAGGAGGTATTGAGACCCAAACTAGATTTCCTTGTAAATATAATGGAGAAGCCAATAAAGGAAGTGGTCGACTATCCAAGGTACTTTAGCTATTCGCTGGAAAAGAAGATAATTCCAAGGTTCCGGGTGTTGAAGGCGATGAATGTAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTCATGGGCTACAAAGGAACGAAACATTTAAGTTCTTCACCCACTTAA

Protein sequence

MAAMASFFFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHFVPFASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLSSAMNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERMRSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGTKHLSSSPT
Homology
[Close]
BLAST of CcUC03G042830 vs. NCBI nr
Match: XP_038895303.1 (transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038895304.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038895305.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 546/602 (90.70%), Postives = 571/602 (94.85%), Query Frame = 0 

Query: 1   MAAMASFFFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHFVP 60
           MA MASFFFPIPTINGCTKSSPL+PLHRF LPQ PSFFPL F PF SRF   L SSHFV 
Sbjct: 1   MATMASFFFPIPTINGCTKSSPLVPLHRFNLPQPPSFFPLTFCPFPSRFPFLLTSSHFVR 60

Query: 61  FASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLV 120
           FASTSSDALPFSDGPPE+DPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLV
Sbjct: 61  FASTSSDALPFSDGPPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLV 120

Query: 121 DGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLSSA 180
           DGVRELDETSMW+SWSKEG EQPL DDFGFKEKV LMAMEKGD+GKVAFLESVGMNLSSA
Sbjct: 121 DGVRELDETSMWVSWSKEGGEQPLVDDFGFKEKVGLMAMEKGDHGKVAFLESVGMNLSSA 180

Query: 181 MNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLS 240
           MNVARYLSGEMLPSLIYKVKYMK LF SGSGDG+++GK ARRMMTNLSIPPDDDVQQTLS
Sbjct: 181 MNVARYLSGEMLPSLIYKVKYMKGLFFSGSGDGEVIGKNARRMMTNLSIPPDDDVQQTLS 240

Query: 241 FFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERMRS 300
           FFEKIEARRGGLDML SNEESFRLLLESFP ML LSVESHVKP+VEFLENI IPKER RS
Sbjct: 241 FFEKIEARRGGLDMLCSNEESFRLLLESFPHMLFLSVESHVKPVVEFLENIGIPKERTRS 300

Query: 301 IFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFE 360
           +FLLFPP+IFF+ EVLKSRILAFEEVGIE T VGKLLLKYPWITANCIQGNLKQIVSF E
Sbjct: 301 MFLLFPPIIFFDTEVLKSRILAFEEVGIEATTVGKLLLKYPWITANCIQGNLKQIVSFLE 360

Query: 361 LEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQ 420
           LEKVPNASIINAISSWPLILGSSTSKLQLMV+RFGGLGV+SKKLGQVIATSPQILLQKPQ
Sbjct: 361 LEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVQSKKLGQVIATSPQILLQKPQ 420

Query: 421 EFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRAIR 480
           EFLQV+S+ EE+GFDK SVGRIITRCPE+SATSVEKTLKRK+EFLISIG+SKTHLPRAIR
Sbjct: 421 EFLQVVSYLEELGFDKGSVGRIITRCPEISATSVEKTLKRKIEFLISIGVSKTHLPRAIR 480

Query: 481 KYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNI 540
           KYPELLVSDPDKTLLPRIRYLRQRG SERDIAFMVGRFSP+LGY+IEEVLRPKLDFLVNI
Sbjct: 481 KYPELLVSDPDKTLLPRIRYLRQRGFSERDIAFMVGRFSPVLGYSIEEVLRPKLDFLVNI 540

Query: 541 MEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGT 600
           MEK IKEVVDYPRYFSYSLEKKI+PRFRVLK +NVECSLKDMLGKNDEEFAV+FMGYKGT
Sbjct: 541 MEKSIKEVVDYPRYFSYSLEKKIVPRFRVLKGINVECSLKDMLGKNDEEFAVQFMGYKGT 600

Query: 601 KH 603
           +H
Sbjct: 601 EH 602

[Close]
BLAST of CcUC03G042830 vs. NCBI nr
Match: XP_008457343.1 (PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo])

HSP 1 Score: 1021.5 bits (2640), Expect = 2.9e-294
Identity = 533/610 (87.38%), Postives = 557/610 (91.31%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD  PE+DPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGD G+VAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELF SGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFF+ EVLKSRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMV+RF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRA 480
           PQEFLQV+SF EE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIG+SKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLV 540
           I+KYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY+IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYPRYFSYSLE KIIPRF VLK MNVECSLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYPRYFSYSLENKIIPRFLVLKGMNVECSLKDMLGKNDEEFSVAFLNYK 600

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 602

[Close]
BLAST of CcUC03G042830 vs. NCBI nr
Match: XP_004145310.2 (transcription termination factor MTERF2, chloroplastic [Cucumis sativus] >KAE8653288.1 hypothetical protein Csa_023221 [Cucumis sativus])

HSP 1 Score: 979.2 bits (2530), Expect = 1.7e-281
Identity = 515/602 (85.55%), Postives = 540/602 (89.70%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHF 60
           M  MASF  FFP PTI G +KSSPLIPLH  ILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MPTMASFFLFFPTPTITGSSKSSPLIPLHPSILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD PP++DPLHSLAEA+LAVSEYLQRFGV EDE+VSIASNSPRFLKM
Sbjct: 61  LPLASISPDALPFSDDPPQEDPLHSLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLS 180
           LVD VRELDETSMW SWSKE  E    D FGFKEKVA MAMEKGD GKVAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWDSWSKERGE---LDGFGFKEKVASMAMEKGDCGKVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMK LF SGSGDG L+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERM 300
           LSFFEKIEARRGGLDMLSSNEESF LLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFLEKIGIPKERM 300

Query: 301 RSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFF+ EVLKSRI+AFEEVG+EVTV GKLLLKYPWIT+NCI GNLKQIVSF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVFGKLLLKYPWITSNCIHGNLKQIVSF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQK 420
           FE EKVP+ASIINAISSWPLILGSSTSKL+LMV+R  GLGVRSKKLGQVIATSPQILL K
Sbjct: 361 FESEKVPSASIINAISSWPLILGSSTSKLELMVDRLDGLGVRSKKLGQVIATSPQILLLK 420

Query: 421 PQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRA 480
           PQEFLQV+SF EE+GFDKES+GRII RCPE+SATSVEKTLKRKLEFLI IG+SKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESIGRIIARCPEISATSVEKTLKRKLEFLIKIGVSKTHLPRA 480

Query: 481 IRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLV 540
           I+KYPELLVSDP KTL PRI+YLRQRGLSERDIA MV RFSPLLGY+IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLHPRIKYLRQRGLSERDIASMVVRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIM+KP KEVVDYPRYFSYSLE KIIPRFR LK MNVECSLKDMLGKNDEEF+V F+G K
Sbjct: 541 NIMKKPKKEVVDYPRYFSYSLENKIIPRFRALKGMNVECSLKDMLGKNDEEFSVAFLGNK 594

[Close]
BLAST of CcUC03G042830 vs. NCBI nr
Match: KAA0060027.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 964.5 bits (2492), Expect = 4.2e-277
Identity = 511/610 (83.77%), Postives = 535/610 (87.70%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD  PE+DPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGD GKVAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELF SGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFF+ EVL+SRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLRSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMV+RF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRA 480
           PQEFLQV+SF EE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIG+SKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLV 540
           I+KYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY+IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYP                         SLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYP-------------------------SLKDMLGKNDEEFSVAFLNYK 577

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 577

[Close]
BLAST of CcUC03G042830 vs. NCBI nr
Match: KAG6607327.1 (Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 943.7 bits (2438), Expect = 7.7e-271
Identity = 491/600 (81.83%), Postives = 526/600 (87.67%), Query Frame = 0 

Query: 4   MASFFFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHFVPFAS 63
           MAS FFPIPTI+   KSS  IP++RF L Q  S  PL+  PF SRFH    SS F+P AS
Sbjct: 1   MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSSTSSRFIPLAS 60

Query: 64  TSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLVDGV 123
           TSSD        P  D LHSL EARLAVSEYLQR GVSE+ESVSIASNSPRFLKMLVDGV
Sbjct: 61  TSSDV-------PPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGV 120

Query: 124 RELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLSSAMNV 183
           RELDETSMWISWS EG E+P+ D FGFKEKVALMA EKGD GKVAFLES GMNLSSAMNV
Sbjct: 121 RELDETSMWISWSSEG-ERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNV 180

Query: 184 ARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSFFE 243
           ARYLSGEMLPSLIYKVKYMKELF SGSGDGK +GK ARRMMTNLSIPPDDDVQQTLSFFE
Sbjct: 181 ARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFE 240

Query: 244 KIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERMRSIFL 303
           KIEARRGGLDMLSSNEESFRLLLESFPRMLLLS++SHVKPMVEFLE I IPKERMR IFL
Sbjct: 241 KIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFL 300

Query: 304 LFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEK 363
            FPP+IFF  EVLKSRI+ FE+VGI     GKLL KYPWIT+NCIQGNLKQIVSFFELEK
Sbjct: 301 SFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEK 360

Query: 364 VPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFL 423
           VPNASI +AI SWPLILGSS SKL+LMV+ F  LGVRSKKLGQVIATSPQ+LLQ+PQEFL
Sbjct: 361 VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLGQVIATSPQLLLQRPQEFL 420

Query: 424 QVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRAIRKYP 483
           QV+S+ EEIGFDKESVGRI+ RCPE+ ATSVEKTL+RKLEFLISIG+SKTHLPRAIRKYP
Sbjct: 421 QVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFLISIGVSKTHLPRAIRKYP 480

Query: 484 ELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEK 543
           ELLVSDPD+TL PRIRYLRQRGLS+RDIAFMVGRFSPLLGY+IEEVL+PKLDFLVN+MEK
Sbjct: 481 ELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNVMEK 540

Query: 544 PIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGTKHL 603
           PIKEVV+YPRYFSYSLEKKI PRFRVLK  N+EC+LKDMLGKNDEEFAV FMG KGT  +
Sbjct: 541 PIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGTSEV 592

[Close]
BLAST of CcUC03G042830 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-29
Identity = 76/230 (33.04%), Postives = 136/230 (59.13%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFFEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGISKTHLPRAIRKYPE 488
           SF   +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L  +++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF+++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of CcUC03G042830 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-25
Identity = 77/310 (24.84%), Postives = 161/310 (51.94%), Query Frame = 0 

Query: 284 MVEFLENIDIPKERMRSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWI 343
           +VE+LE+  + ++ M  +    P ++ F+ E +KSR+  F ++G+     G ++  YP I
Sbjct: 284 IVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKI 343

Query: 344 TANCIQGNLKQIVSFFELEKVPNASIINAISSWPLILGSS-TSKLQLMVERFGGLGVRSK 403
                   +++ +++ +   +    +   ++  P ++G S   + + +V+ F  LG+  +
Sbjct: 344 IGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKE 403

Query: 404 KLGQVIATSPQI-LLQKPQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRK 463
            + +++   P +  +   +     + F +E+G   E++G ++ + P +   S+ K ++  
Sbjct: 404 GMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPV 463

Query: 464 LEFLIS-IGISKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSP 523
           + FL++  G+++  + + I   P LL       L P +RY    G+    +  M+  F  
Sbjct: 464 VIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPM 523

Query: 524 LLGYTIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLK 583
           LL Y ++  LRPK  +L   M +P+++++++PR+FSYSLE++IIPR  ++    V   L+
Sbjct: 524 LLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLR 583

Query: 584 DMLGKNDEEF 591
            ML   DEEF
Sbjct: 584 YMLACTDEEF 592

[Close]
BLAST of CcUC03G042830 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 9.2e-25
Identity = 69/276 (25.00%), Postives = 134/276 (48.55%), Query Frame = 0 

Query: 316 LKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEKVPNASIINAISS 375
           L+ + L   ++G+ +  +  +  K+       + G +K +V F     +P + I   +  
Sbjct: 196 LRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCK 255

Query: 376 WPLILG-SSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVISFFEEIGF 435
            P I G S T  L+  +     LG+   +  ++I+  P IL    Q+    + F  + G 
Sbjct: 256 RPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGL 315

Query: 436 DKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRAIRKYPELLVSDPDKTL 495
            +E +GRI+TRCP + + SVE  L+  +E+  S+ +    L   + + P+      +  L
Sbjct: 316 TEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL---LHRCPQTFGLSIESNL 375

Query: 496 LPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEKPIKEVVDYPRY 555
            P   +  ++G    +I  M+ R+  L  ++++E + PK D+    M+ P  E+V +P++
Sbjct: 376 KPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQF 435

Query: 556 FSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEF 591
           F YSL+++I PR+ +++   V   L  +L  +  EF
Sbjct: 436 FGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467

[Close]
BLAST of CcUC03G042830 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 6.6e-23
Identity = 66/196 (33.67%), Postives = 112/196 (57.14%), Query Frame = 0 

Query: 398 GVRSKKLGQVIATSPQILLQKPQ-EFLQVISFF-EEIGFDKESVGRIITRCPEVSATSVE 457
           G+    +G+++   P +L   P+ E L V+ F   EI   ++ + + I+RCP +  +SV+
Sbjct: 76  GLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVD 135

Query: 458 KTLKRKLEFLISIGISKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQ-RGLSERDIAFM 517
             L+  L FL ++G           +   LLVS+ ++TL+P+I YL +  G +  ++A M
Sbjct: 136 YQLRPALTFLKTLGF--VGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKM 195

Query: 518 VGRFSPLLGYTIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMN 577
           V R   LL Y+++  L PK++F +  M   +KE+  +P+YFS+SLE+KI PR R+LK   
Sbjct: 196 VVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHG 255

Query: 578 VECSLKDMLGKNDEEF 591
           +   L +ML  +D +F
Sbjct: 256 ILMPLSEMLKVSDGQF 269

[Close]
BLAST of CcUC03G042830 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.6e-22
Identity = 86/373 (23.06%), Postives = 167/373 (44.77%), Query Frame = 0 

Query: 232 DDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLLLES-FPRML-LLSVESHVKPMVEFLE 291
           +DD+   +S     E ++    +    + S R  +E  +PR+   + ++    P++++L 
Sbjct: 133 EDDLDLGISPNATSEKKKESWRLDGRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLS 192

Query: 292 NIDIPKERMRSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQ 351
              + +     ++    P +  N    + R+     VG++   + ++LL+ P I    ++
Sbjct: 193 TFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVE 252

Query: 352 GNLKQIVSFFELEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIA 411
            NLK  +SF                              LM     GLG+ + K+GQ++A
Sbjct: 253 NNLKAHISF------------------------------LM-----GLGIPNSKIGQIVA 312

Query: 412 TSPQILLQKPQEFLQ--VISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLI- 471
            +P +     +  L+  +    EE+G  +  VG+++   P++    ++ T   +  FL  
Sbjct: 313 ATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSK 372

Query: 472 SIGISKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTI 531
            +G  +  + + ++K+P+LL    D   LPRI +LR  G+   DI  ++   + +L  ++
Sbjct: 373 ELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSL 432

Query: 532 EEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFRV---LKAMNVECSLKDML 591
           E+ L+PK  +LVN +   +  +  YP Y S SL+++I PR R    LK +         L
Sbjct: 433 EDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSSL 470

Query: 592 GKNDEEFAVEFMG 597
             NDE F  ++ G
Sbjct: 493 VPNDESFCQQWAG 470

[Close]
BLAST of CcUC03G042830 vs. ExPASy TrEMBL
Match: A0A1S3C6K3 (transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497057 PE=3 SV=1)

HSP 1 Score: 1021.5 bits (2640), Expect = 1.4e-294
Identity = 533/610 (87.38%), Postives = 557/610 (91.31%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD  PE+DPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGD G+VAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELF SGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFF+ EVLKSRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMV+RF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRA 480
           PQEFLQV+SF EE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIG+SKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLV 540
           I+KYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY+IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYPRYFSYSLE KIIPRF VLK MNVECSLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYPRYFSYSLENKIIPRFLVLKGMNVECSLKDMLGKNDEEFSVAFLNYK 600

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 602

[Close]
BLAST of CcUC03G042830 vs. ExPASy TrEMBL
Match: A0A0A0LV84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=3 SV=1)

HSP 1 Score: 977.6 bits (2526), Expect = 2.3e-281
Identity = 514/599 (85.81%), Postives = 539/599 (89.98%), Query Frame = 0 

Query: 4   MASF--FFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHFVPF 63
           MASF  FFP PTI G +KSSPLIPLH  ILPQS     LNF PF SRFHS L SSHF+P 
Sbjct: 1   MASFFLFFPTPTITGSSKSSPLIPLHPSILPQS-----LNFCPFPSRFHSLLTSSHFLPL 60

Query: 64  ASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLVD 123
           AS S DALPFSD PP++DPLHSLAEA+LAVSEYLQRFGV EDE+VSIASNSPRFLKMLVD
Sbjct: 61  ASISPDALPFSDDPPQEDPLHSLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKMLVD 120

Query: 124 GVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLSSAM 183
            VRELDETSMW SWSKE  E    D FGFKEKVA MAMEKGD GKVAFLESVGMNLSSAM
Sbjct: 121 AVRELDETSMWDSWSKERGE---LDGFGFKEKVASMAMEKGDCGKVAFLESVGMNLSSAM 180

Query: 184 NVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSF 243
           NVARYLSGEMLPSLIYKVKYMK LF SGSGDG L+GK ARRMMTNLSIPPDDDVQQTLSF
Sbjct: 181 NVARYLSGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDDVQQTLSF 240

Query: 244 FEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERMRSI 303
           FEKIEARRGGLDMLSSNEESF LLLESFPRMLLLSVESHVKPMVEFLE I IPKERMRSI
Sbjct: 241 FEKIEARRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFLEKIGIPKERMRSI 300

Query: 304 FLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFEL 363
           FLLFPPVIFF+ EVLKSRI+AFEEVG+EVTV GKLLLKYPWIT+NCI GNLKQIVSFFE 
Sbjct: 301 FLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVFGKLLLKYPWITSNCIHGNLKQIVSFFES 360

Query: 364 EKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQE 423
           EKVP+ASIINAISSWPLILGSSTSKL+LMV+R  GLGVRSKKLGQVIATSPQILL KPQE
Sbjct: 361 EKVPSASIINAISSWPLILGSSTSKLELMVDRLDGLGVRSKKLGQVIATSPQILLLKPQE 420

Query: 424 FLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRAIRK 483
           FLQV+SF EE+GFDKES+GRII RCPE+SATSVEKTLKRKLEFLI IG+SKTHLPRAI+K
Sbjct: 421 FLQVVSFLEEVGFDKESIGRIIARCPEISATSVEKTLKRKLEFLIKIGVSKTHLPRAIKK 480

Query: 484 YPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIM 543
           YPELLVSDP KTL PRI+YLRQRGLSERDIA MV RFSPLLGY+IEEVLRPKLDFLVNIM
Sbjct: 481 YPELLVSDPHKTLHPRIKYLRQRGLSERDIASMVVRFSPLLGYSIEEVLRPKLDFLVNIM 540

Query: 544 EKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGT 601
           +KP KEVVDYPRYFSYSLE KIIPRFR LK MNVECSLKDMLGKNDEEF+V F+G K T
Sbjct: 541 KKPKKEVVDYPRYFSYSLENKIIPRFRALKGMNVECSLKDMLGKNDEEFSVAFLGNKRT 591

[Close]
BLAST of CcUC03G042830 vs. ExPASy TrEMBL
Match: A0A5A7UZF1 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00730 PE=3 SV=1)

HSP 1 Score: 964.5 bits (2492), Expect = 2.0e-277
Identity = 511/610 (83.77%), Postives = 535/610 (87.70%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD  PE+DPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGD GKVAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELF SGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFF+ EVL+SRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLRSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMV+RF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRA 480
           PQEFLQV+SF EE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIG+SKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLV 540
           I+KYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY+IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYP                         SLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYP-------------------------SLKDMLGKNDEEFSVAFLNYK 577

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 577

[Close]
BLAST of CcUC03G042830 vs. ExPASy TrEMBL
Match: A0A6J1GD59 (transcription termination factor MTERF2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452868 PE=3 SV=1)

HSP 1 Score: 935.3 bits (2416), Expect = 1.3e-268
Identity = 488/597 (81.74%), Postives = 523/597 (87.60%), Query Frame = 0 

Query: 4   MASFFFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHFVPFAS 63
           MAS FFPIPTI+   KSS  IP++RF L Q  S  PL+  PF SRFH    SS F+P AS
Sbjct: 1   MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSSTSSRFIPLAS 60

Query: 64  TSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLVDGV 123
           TSSD        P  D L+SL EARLAVSEYLQR GVSE+ESVSIASNSPRFLKMLVDGV
Sbjct: 61  TSSDV-------PPDDSLNSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGV 120

Query: 124 RELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLSSAMNV 183
           RELDETSMWISWS EG E+P+ D FGFKEKVALMA EKGD GKVAFLES GMNLSSAMNV
Sbjct: 121 RELDETSMWISWSSEG-ERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNV 180

Query: 184 ARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSFFE 243
           ARYLSGEMLPSLIYKVKYMKELF SGSGDGK +GK ARRMMTN SIPPDDDVQQTLSFFE
Sbjct: 181 ARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNFSIPPDDDVQQTLSFFE 240

Query: 244 KIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERMRSIFL 303
           KIEARRGGLDMLSSNEESFRLLLESFPRMLLLS++SHVKPMVEFLE I IPKERMR IFL
Sbjct: 241 KIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFL 300

Query: 304 LFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEK 363
            FPP+IFF  EVLKSRI+ FE+VGI     GKLL KYPWIT+NCIQ NLKQIVSFFELEK
Sbjct: 301 SFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQCNLKQIVSFFELEK 360

Query: 364 VPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFL 423
           VPNASI +AI SWPLILGSS SKL+LMV+ F  LGVRSKKLGQVIATSPQ+LLQ+PQEFL
Sbjct: 361 VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLGQVIATSPQLLLQRPQEFL 420

Query: 424 QVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGISKTHLPRAIRKYP 483
           QV+S+ EEIGFDKESVGRI+ RCPE+ ATSVEKTL+RKLEFLISIG+SKTHLPRAIRKYP
Sbjct: 421 QVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFLISIGVSKTHLPRAIRKYP 480

Query: 484 ELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEK 543
           ELLVSDPD+TL PRIRYLRQRGLS+RDIAFMVGRFSPLLGY+IEEVL+PKLDFLVN+MEK
Sbjct: 481 ELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNVMEK 540

Query: 544 PIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGT 601
           PIKEVV+YPRYFSYSLEKKI PRFRVLK  N+EC+LKDMLGKNDEEFAV FMG KGT
Sbjct: 541 PIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 589

[Close]
BLAST of CcUC03G042830 vs. ExPASy TrEMBL
Match: A0A5D3BE49 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00780 PE=3 SV=1)

HSP 1 Score: 932.6 bits (2409), Expect = 8.6e-268
Identity = 511/681 (75.04%), Postives = 535/681 (78.56%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSPSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGPPEKDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD  PE+DPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDYGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGD G+VAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFSSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELF SGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLENIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFF+ EVLKSRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEK------------------------------------------------------- 420
           FELEK                                                       
Sbjct: 361 FELEKASIENLPFNGFVWEGAKVKGDNTRYLFSFLLPLWFKLPFIFVLSIHILFLFIPSS 420

Query: 421 ----------------VPNASIINAISSWPLILGSSTSKLQLMVERFGGLGVRSKKLGQV 480
                           VPNASIINAISSWPLILGSSTSKLQLMV+RF GLGVRSKKLGQV
Sbjct: 421 SHSVFLFAFPELNFYGVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQV 480

Query: 481 IATSPQILLQKPQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLIS 540
           IATSPQILL +PQEFLQV+SF EE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLIS
Sbjct: 481 IATSPQILLLEPQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLIS 540

Query: 541 IGISKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIE 600
           IG+SKTHLPRAI+KYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY+IE
Sbjct: 541 IGVSKTHLPRAIKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIE 600

Query: 601 EVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKND 609
           EVLRPKLDFLVNIMEKPIKEVVDYP                         SLKDMLGKND
Sbjct: 601 EVLRPKLDFLVNIMEKPIKEVVDYP-------------------------SLKDMLGKND 648

[Close]
BLAST of CcUC03G042830 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 582.8 bits (1501), Expect = 3.2e-166
Identity = 311/568 (54.75%), Postives = 409/568 (72.01%), Query Frame = 0 

Query: 34  SPSFFPLNFRPFSSRFHSFLASSHFVPFAS---TSSDALPFSDGPPEKDPLHSLAEARLA 93
           SP     NF   SS F S    + F  + S   T S +L   D     +   +  EA+ +
Sbjct: 17  SPPLKSCNFSS-SSLFFSPRRVTLFPAYHSGRVTVSASLQHGDSNFSSNSSQTNQEAQNS 76

Query: 94  VSEYLQR-FGVSEDESVSIASNSPRFLKMLVDGVRELDETSMWISWSKEGEEQPLADDFG 153
           ++ +L+R  G+SE +S  I+SN P++ +M+V+GVR+L+E   W SW   GE + + +  G
Sbjct: 77  IAGFLRRDTGLSEADSDFISSNCPKYTRMIVEGVRDLEE---WNSWKGSGESERVEEGLG 136

Query: 154 FKEKVALMAMEKGDYGKVAFLESVGMNLSSAMNVARYLSGEMLPSLIYKVKYMKELFSSG 213
           FKEKV  M  +KGD GKVAFLES+G++LSSAM +A Y+S E LP L+ KVKY+KE+F SG
Sbjct: 137 FKEKVIYMVKQKGDGGKVAFLESLGLSLSSAMYLAHYVSSESLPILLDKVKYLKEIFFSG 196

Query: 214 SGDGKLLGKCARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLLLESF 273
           S +  L+GK ARRMM  LSIP D+DVQQTLSFFEKIEARRGGLDML S + SFR LLESF
Sbjct: 197 SDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESF 256

Query: 274 PRMLLLSVESHVKPMVEFLENIDIPKERMRSIFLLFPPVIFFNAEVLKSRI-LAFEEVGI 333
           PR+LLLS E+ +KPMVEFLE+I IPK  +  + LL+PP++    E +K R+  A E+V +
Sbjct: 257 PRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAMEKVSV 316

Query: 334 EVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEKVPNASIINAISSWPLILGSSTSKLQ 393
                GKLLLKYPWI +  IQ N   I SFF  E V    I +AI  WPL+LG S S ++
Sbjct: 317 VNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGCSASNME 376

Query: 394 LMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVISFFEEIGFDKESVGRIITRCPE 453
           +MV+ F  LGVR K++G+VI   PQ+LL KPQEFL+V+ F E++GF KE VG+I+ RCPE
Sbjct: 377 MMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFLKVVCFLEDLGFQKEIVGQILCRCPE 436

Query: 454 VSATSVEKTLKRKLEFLISIGISKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQRGLSE 513
           +   S+EKTL++KL FL   G+S TH PR I+KYPE L+ D DKT+LPR++YL + G+SE
Sbjct: 437 IFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISE 496

Query: 514 RDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFR 573
           R+IAFM+ +FSP+LGY+I++VLRPK +FLVN MEKP++EV++YPRYFSYSLEK+I PRFR
Sbjct: 497 REIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFR 556

Query: 574 VLKAMNVECSLKDMLGKNDEEFAVEFMG 597
           VLK  N+EC+L++MLGKNDEEFA +F+G
Sbjct: 557 VLKGRNIECTLQEMLGKNDEEFAADFLG 580

[Close]
BLAST of CcUC03G042830 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.7 bits (330), Expect = 2.0e-30
Identity = 76/230 (33.04%), Postives = 136/230 (59.13%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFFEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGISKTHLPRAIRKYPE 488
           SF   +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L  +++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF+++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of CcUC03G042830 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.7 bits (330), Expect = 2.0e-30
Identity = 76/230 (33.04%), Postives = 136/230 (59.13%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFFEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGISKTHLPRAIRKYPE 488
           SF   +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L  +++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF+++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of CcUC03G042830 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.7 bits (330), Expect = 2.0e-30
Identity = 76/230 (33.04%), Postives = 136/230 (59.13%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVERFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFFEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGISKTHLPRAIRKYPE 488
           SF   +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYTIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L  +++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF+++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of CcUC03G042830 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 119.0 bits (297), Expect = 1.3e-26
Identity = 77/310 (24.84%), Postives = 161/310 (51.94%), Query Frame = 0 

Query: 284 MVEFLENIDIPKERMRSIFLLFPPVIFFNAEVLKSRILAFEEVGIEVTVVGKLLLKYPWI 343
           +VE+LE+  + ++ M  +    P ++ F+ E +KSR+  F ++G+     G ++  YP I
Sbjct: 284 IVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKI 343

Query: 344 TANCIQGNLKQIVSFFELEKVPNASIINAISSWPLILGSS-TSKLQLMVERFGGLGVRSK 403
                   +++ +++ +   +    +   ++  P ++G S   + + +V+ F  LG+  +
Sbjct: 344 IGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKE 403

Query: 404 KLGQVIATSPQI-LLQKPQEFLQVISFFEEIGFDKESVGRIITRCPEVSATSVEKTLKRK 463
            + +++   P +  +   +     + F +E+G   E++G ++ + P +   S+ K ++  
Sbjct: 404 GMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPV 463

Query: 464 LEFLIS-IGISKTHLPRAIRKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSP 523
           + FL++  G+++  + + I   P LL       L P +RY    G+    +  M+  F  
Sbjct: 464 VIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPM 523

Query: 524 LLGYTIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFRVLKAMNVECSLK 583
           LL Y ++  LRPK  +L   M +P+++++++PR+FSYSLE++IIPR  ++    V   L+
Sbjct: 524 LLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLR 583

Query: 584 DMLGKNDEEF 591
            ML   DEEF
Sbjct: 584 YMLACTDEEF 592

The following BLAST results are available for this feature:
BLAST of CcUC03G042830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895303.10.0e+0090.70transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_0... [more]
XP_008457343.12.9e-29487.38PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo][more]
XP_004145310.21.7e-28185.55transcription termination factor MTERF2, chloroplastic [Cucumis sativus] >KAE865... [more]
KAA0060027.14.2e-27783.77transcription termination factor MTERF2 [Cucumis melo var. makuwa][more]
KAG6607327.17.7e-27181.83Transcription termination factor MTERF6, chloroplastic/mitochondrial, partial [C... [more]
BLAST of CcUC03G042830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL62.8e-2933.04Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
F4IHL31.8e-2524.84Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
F4JVI39.2e-2525.00Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
Q84X536.6e-2333.67Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
Q9FM805.6e-2223.06Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of CcUC03G042830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C6K31.4e-29487.38transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 G... [more]
A0A0A0LV842.3e-28185.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=3 SV=1[more]
A0A5A7UZF12.0e-27783.77Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A6J1GD591.3e-26881.74transcription termination factor MTERF2, chloroplastic OS=Cucurbita moschata OX=... [more]
A0A5D3BE498.6e-26875.04Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of CcUC03G042830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G78930.13.2e-16654.75Mitochondrial transcription termination factor family protein [more]
AT4G38160.12.0e-3033.04Mitochondrial transcription termination factor family protein [more]
AT4G38160.22.0e-3033.04Mitochondrial transcription termination factor family protein [more]
AT4G38160.32.0e-3033.04Mitochondrial transcription termination factor family protein [more]
AT2G21710.11.3e-2624.84Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 370..400
e-value: 67.0
score: 12.4
coord: 545..576
e-value: 2.1E-5
score: 33.9
coord: 405..435
e-value: 2.4
score: 17.2
coord: 512..544
e-value: 1.4
score: 18.0
coord: 440..471
e-value: 1.6E-6
score: 37.7
coord: 299..329
e-value: 87.0
score: 12.0
coord: 263..294
e-value: 0.0077
score: 25.4
coord: 476..507
e-value: 4.1E-4
score: 29.7
coord: 334..365
e-value: 2400.0
score: 0.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 243..320
e-value: 3.8E-7
score: 29.3
coord: 286..591
e-value: 1.2E-88
score: 297.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 88..598
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 386..599
e-value: 5.4E-48
score: 165.4
NoneNo IPR availablePANTHERPTHR13068:SF3TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIALcoord: 88..598

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC03G042830.1CcUC03G042830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032502 developmental process
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
molecular_function GO:0003690 double-stranded DNA binding