CcUC03G042750 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAATACTTTAAGGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGACTTAATCAGAGTGGTTCATCTCAACGGCCATGTCCAAGAATTCTCACCGCCGCTCGCCGCCGCCGAGATCCTCCACGCCAATCCCGGCCACGTCCTCACCACTCCCTCCTCCGACGACCACCGCCTCGTCCGTCGTGTCACCATTCTCTCTCCCGAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATTCCGGCTGATTCCGACCATCGGAAGGCTGCTAAAAAGCCAACCTCCGCCATCTCCGGCGGCGGCGTTTTCCCGGAATCTGAAGATCTCAGTCAACGGTTCGAGGATGTCATTGTCTTGAAGGAGGCTAAACCCAGCCGCCGAGATCGCCGGAGAAGCCGCAGCTACGGCGGCCCGTGGCAGCCTCACTTACACAGCATTAGTGAAGATTAA ATGGGTAATACTTTAAGGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGACTTAATCAGAGTGGTTCATCTCAACGGCCATGTCCAAGAATTCTCACCGCCGCTCGCCGCCGCCGAGATCCTCCACGCCAATCCCGGCCACGTCCTCACCACTCCCTCCTCCGACGACCACCGCCTCGTCCGTCGTGTCACCATTCTCTCTCCCGAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATTCCGGCTGATTCCGACCATCGGAAGGCTGCTAAAAAGCCAACCTCCGCCATCTCCGGCGGCGGCGTTTTCCCGGAATCTGAAGATCTCAGTCAACGGTTCGAGGATGTCATTGTCTTGAAGGAGGCTAAACCCAGCCGCCGAGATCGCCGGAGAAGCCGCAGCTACGGCGGCCCGTGGCAGCCTCACTTACACAGCATTAGTGAAGATTAA ATGGGTAATACTTTAAGGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGACTTAATCAGAGTGGTTCATCTCAACGGCCATGTCCAAGAATTCTCACCGCCGCTCGCCGCCGCCGAGATCCTCCACGCCAATCCCGGCCACGTCCTCACCACTCCCTCCTCCGACGACCACCGCCTCGTCCGTCGTGTCACCATTCTCTCTCCCGAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATTCCGGCTGATTCCGACCATCGGAAGGCTGCTAAAAAGCCAACCTCCGCCATCTCCGGCGGCGGCGTTTTCCCGGAATCTGAAGATCTCAGTCAACGGTTCGAGGATGTCATTGTCTTGAAGGAGGCTAAACCCAGCCGCCGAGATCGCCGGAGAAGCCGCAGCTACGGCGGCCCGTGGCAGCCTCACTTACACAGCATTAGTGAAGATTAA MGNTLRHCLGCILPCGALDLIRVVHLNGHVQEFSPPLAAAEILHANPGHVLTTPSSDDHRLVRRVTILSPESHLRRGGIYFLIPADSDHRKAAKKPTSAISGGGVFPESEDLSQRFEDVIVLKEAKPSRRDRRRSRSYGGPWQPHLHSISED Homology
BLAST of CcUC03G042750 vs. NCBI nr
Match: XP_038895775.1 (uncharacterized protein LOC120083938 [Benincasa hispida]) HSP 1 Score: 282.0 bits (720), Expect = 3.1e-72 Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CcUC03G042750 vs. NCBI nr
Match: KAA0036509.1 (uncharacterized protein E6C27_scaffold6629G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69 Identity = 136/154 (88.31%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of CcUC03G042750 vs. NCBI nr
Match: XP_022964962.1 (uncharacterized protein LOC111464913 [Cucurbita moschata]) HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63 Identity = 121/152 (79.61%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of CcUC03G042750 vs. NCBI nr
Match: XP_022970467.1 (uncharacterized protein LOC111469438 [Cucurbita maxima]) HSP 1 Score: 252.7 bits (644), Expect = 2.0e-63 Identity = 121/152 (79.61%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of CcUC03G042750 vs. NCBI nr
Match: XP_011658739.1 (uncharacterized protein LOC105436080 [Cucumis sativus] >KGN65837.1 hypothetical protein Csa_023235 [Cucumis sativus]) HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61 Identity = 124/156 (79.49%), Postives = 133/156 (85.26%), Query Frame = 0
BLAST of CcUC03G042750 vs. ExPASy TrEMBL
Match: A0A5A7T586 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6629G00010 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 5.4e-70 Identity = 136/154 (88.31%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of CcUC03G042750 vs. ExPASy TrEMBL
Match: A0A6J1HJ26 (uncharacterized protein LOC111464913 OS=Cucurbita moschata OX=3662 GN=LOC111464913 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 5.8e-64 Identity = 121/152 (79.61%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of CcUC03G042750 vs. ExPASy TrEMBL
Match: A0A6J1HZ69 (uncharacterized protein LOC111469438 OS=Cucurbita maxima OX=3661 GN=LOC111469438 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 9.9e-64 Identity = 121/152 (79.61%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of CcUC03G042750 vs. ExPASy TrEMBL
Match: A0A0A0LYB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533440 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.1e-61 Identity = 124/156 (79.49%), Postives = 133/156 (85.26%), Query Frame = 0
BLAST of CcUC03G042750 vs. ExPASy TrEMBL
Match: A0A6J1GBI2 (uncharacterized protein LOC111452664 OS=Cucurbita moschata OX=3662 GN=LOC111452664 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.7e-53 Identity = 109/152 (71.71%), Postives = 120/152 (78.95%), Query Frame = 0
BLAST of CcUC03G042750 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 134.0 bits (336), Expect = 9.9e-32 Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 0
BLAST of CcUC03G042750 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30 Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = 0
BLAST of CcUC03G042750 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 4.4e-24 Identity = 71/194 (36.60%), Postives = 101/194 (52.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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