CcUC03G042560 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC03G042560
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Structure-specific endonuclease subunit SLX1 homolog
Location	CicolChr03: 266066 .. 270019 (-)
RNA-Seq Expression	CcUC03G042560
Synteny	CcUC03G042560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGAGTGGTTGGTTGGGTTAGGTGAAAAAGCAATGAAGCTTGGTTGCATGGCATCCAAATGTTCCAAATTCCCCAATTTTGATAATTCCTTCAATTCACTCCCTTCATTTTACCCTAATCTCATTTCTTCCCCTTCCGATAATTCTCTCTCTTATTCACATCCGGAGGTCAGAGAGAACTGAGAAGAACGAAGGGCCTTCAAGAAAAAAAACAAAAAAACATGTGTCCGCTCAGATTTATTCTCATATTTCTCTCAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTACAGGCCGACGATAATTCCGATACTCACTCCAAAGATTTGGATTCCAATTCCTCCTCCTCCTCCTCCTCCTCCAAGGTTCTTCTAATTCTTTTTCATCGGAATCTTTCGTTTCCTTGTTGTTTCTTTGTTTGTGTCTGAACGGAATGATTGGTGTATGTTTGAACAGGTCTCATCGGTGTTCAGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGTCATTTGTTTTCCTCGTAGGAGAAGGCTTCCAATTGACGAGTTTTTCGGGCTAGGGTTTTTGTTTGGGTTAATTGTATTTCTTTTCCCCTCATTTTCTTCTCTTTTGTATATCTCGTGTGGATGGATAATATCTACTTTTCCCTTTCCCTTTCCCCTCTTCGAATTGATTTTGTAAAACCCTTCTTCTTCCTTCCTATCCAATATCTAAGTCTGCAATTCAGAAATGCTCAATCGCAAACGATTTTGATTTCAATTGGGATTTTCGAGAGATAGAGAAATTAAATCAATAAAATTGCAATAAAGACGATGAATCAACCATTGAATCGTCAATCCGTTTGCGTGAAAGCCGCTCGGCTTTCCAAATTAAATCGGGGTGGCCGGCGATGAAGGACTCAAGATAAACAACTTTAAATTAAAGTTAATTTAATTTGGTAAAGATTCGTTGCGTATTTTAATATAAAATATACGGCAACCCAAAGTTAAGAAAAGTCTTGCGGGGAAATCGAGGCTCGTGTATGCTTTTACTTTTAAACGTATTATATTCTGCACCTACAAAAAAATTAAAAGAATAAAAAAAATTGTTAAAAAAAGGGTTCTTATATTCTAATCTGCAAAAACTCGATGTCATACTCACGTGTCCATGTCGAAGGAAAATTGCTATTTCTAATGGGTCACACATGGTGAAATGACGTGAATACCCCCAAAAATCTTATTTTTCACAAGAGTCCATTTTTTTGTAGTACTCTCTAATGTCAGTCATTTGTTGTAAAATTCATCCTGTCTAACTTGACAAAAGACTAACATTAGAGAGTACTAAAAAAAATGGACTCTTGTGAAGAATAAGATCTTTGGAGGTATTCACGTCATTTCACCATGTGGGACTCATCTCTAAAATTCTGAAAAGTTGAAAATGAGTTAGAACGAGAACTAAAAAAAAAAATTAGTTTTGTCACGTCAAAAACTTTTTGGGTTAGAAATAGCAATTTCTACACGTGGGATCCATCTTTAAAATGAAAATTTTTTGGGTTAAAAATAACAATTTACCATGTTTAAGTCCTTTTAGGACAAAACGATAATTTCACGAACCGGTTTCAAAATCAAAATGGCCTTTCTCATGTTTTTCACTAACGGCCGAATTGTCTTTTTGAGTAAATTCTCCATCTTGCTAGAGAGGAGAGAGAGATGGGGAAGAGGAAAGAGAAATCGGAAATCTCTAAGACCATGACTGTAACAGAGGAGAAGGAAGATGATGAAGTTGAAGATGAAGAAGAAAGAGGCAATGAAGTGAATGGGTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGGTTTGAATCTTTCCCACTTCATTCGAGCATTTTTCTGTTCTTGGATCCCTAAATCGGATCTTCTAATTTTTCTTTGTAAATTCCCAATTTCCGGATTCAATTCTCTGCTTCCCAATACTGGAAATTTCTTTTCCTTCCTGCATCAAGAAATGTGGGAAATGCGTAAGTCGATCTGCATTGGATTGATTGGATGACTGTTTATATGGAATATTAGATTCACAGTGAACCCGAAACGCAGAATCAGACAGCACAATGGTGAAATTAGATGCGGCGCGTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTATGCGTTTATGGCTTCCCCACTAATGTCTCTGCCCTTCAGGTTACCTTTCTAGATTTTGAGCTCTAGAACTAGTTTGATTGTGCATCTTTTATACTCGATTGTCTTCTACTAGCTGAATAACACTTCGATGATTATGCACATGTTAAGATGTTAAGAGTACATATTATGGCTTTTCGGGCTTGAAGAATTTACTAAAATGTGTTGCTGGTTTTCCTCTTTAGCCATTTTCTTCTTGTGACTTTCCATCAGTTCCAGAATTTGATGTTCTAACTATGGATGCAGTTTGAATGGGCGTGGCAGCATCCTACTGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATACACAATGCTCACACTTCCTGCTTGGTGTAGGTATGACGTATGAGAAAATTTATACAATTCTATTGAATTTTTCTGTTAAATGTGTTAAATGTGTTGGAAATGTTAAGACAATATTCTTGTAACTGTGAGGTTTTTGGGGCGAAACCAAAGTTTAAGTCTGATAGGGGCAATATCTTACTATTGTGATTTATGAAGGAGCAAAAAACTGATATAATTTCAATGAAATTTGTCTGCCAAATTCTCTATTCATCTTTTTCTCCTGATCCTTGTAGTTTGAATATAACTGTAAACTACTTCTCAACAAAGTACATGAAGAATGCAGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCCCCCATCGATGAGCTTCCATGCTATTCCGAAGGAGATCAAAATGTGCTTGAAAATGAAGATGATTGGGAGTATAATAGAGAATGTGAAGAAATTTGTAGTTTTCGAGTATATGGATCAATCAAAGAAGTTTTAAATGAAGTTCCTAGTACAGATAGAAGATCTCATGAATTGCATGGATGCGATGAAGAACTCAAGGACAATGAACAAGTGCCACCTTCTTCATGTACTCCATCTTATATTGATGTGGGTATGTCTTATGACTTGCGTGGATGTGATGAAGAACTCGAGGCAGCTTCGTGTGCTCAGTCTTGTATTTTAGGTATATCCAGGACCGAAATTACCATTGACGATGGAGAGGAAGACCAATCAGAAGGGAGTGGTATGAACTTGCAGCAGCAAATTGGTATGAAGAATTTAACATCAGGAATAGCTTCTGAAATCAACAAAGTTTCGAGGTGTACTAATGGGCTTCCTCCTGTTGAGTATGAGGTTATAGATGTGTCTACCCCATCTCCCAACTGCAGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCGGGTACGTCTGAGATTATTGACTTGACTAAATCTCCTACGTTTATCCAATTGTAGAACGATGGATGGATTTGGATTCTGCATATAATTGAGTTTGCCTACGACTTCGAATGACTTTTGCATTTTTCCATGAGGAGATAGTATCTATGTACTGCTACAGATAGCATTTTCAACCCTTTCAGAGGCAACGTGGGCTCAAGTTTGGTTGACCAAATAGAGAGGGGAACAACAACATGATGTTGTCAAGTTTTATATAATAATAGCCTTTCCTTCAAAAGCCATTTTAAGGGAATCAAGTGTGAAAATGGAATTCTGATGCTTGTATTTTAGAAGAGAACGTGGTATCAATTAAATTGTTTCAAACGATTGGGCTTAAAGTTGAACTATTCAACTACAGCCCCATTACATATACTAATAAAATTTTGGCAGATTTCCC

mRNA sequence

GAAAGGAGTGGTTGGTTGGGTTAGGTGAAAAAGCAATGAAGCTTGGTTGCATGGCATCCAAATGTTCCAAATTCCCCAATTTTGATAATTCCTTCAATTCACTCCCTTCATTTTACCCTAATCTCATTTCTTCCCCTTCCGATAATTCTCTCTCTTATTCACATCCGGAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTACAGGCCGACGATAATTCCGATACTCACTCCAAAGATTTGGATTCCAATTCCTCCTCCTCCTCCTCCTCCTCCAAGGTCTCATCGGTGTTCAGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGTCATTTGTTTTCCTCGTAGGAGAAGGCTTCCAATTGACGAGTTTTTCGGGCTAGGAGAGGAGAGAGAGATGGGGAAGAGGAAAGAGAAATCGGAAATCTCTAAGACCATGACTGTAACAGAGGAGAAGGAAGATGATGAAGTTGAAGATGAAGAAGAAAGAGGCAATGAAGTGAATGGGTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAACCCGAAACGCAGAATCAGACAGCACAATGGTGAAATTAGATGCGGCGCGTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTATGCGTTTATGGCTTCCCCACTAATGTCTCTGCCCTTCAGTTTGAATGGGCGTGGCAGCATCCTACTGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATACACAATGCTCACACTTCCTGCTTGGTGTAGTTTGAATATAACTGTAAACTACTTCTCAACAAAGTACATGAAGAATGCAGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCCCCCATCGATGAGCTTCCATGCTATTCCGAAGGAGATCAAAATGTGCTTGAAAATGAAGATGATTGGGAGTATAATAGAGAATGTGAAGAAATTTGTAGTTTTCGAGTATATGGATCAATCAAAGAAGTTTTAAATGAAGTTCCTAGTACAGATAGAAGATCTCATGAATTGCATGGATGCGATGAAGAACTCAAGGACAATGAACAAGTGCCACCTTCTTCATGTACTCCATCTTATATTGATGTGGGTATGTCTTATGACTTGCGTGGATGTGATGAAGAACTCGAGGCAGCTTCGTGTGCTCAGTCTTGTATTTTAGGTATATCCAGGACCGAAATTACCATTGACGATGGAGAGGAAGACCAATCAGAAGGGAGTGGTATGAACTTGCAGCAGCAAATTGGTATGAAGAATTTAACATCAGGAATAGCTTCTGAAATCAACAAAGTTTCGAGGTGTACTAATGGGCTTCCTCCTGTTGAGTATGAGGTTATAGATGTGTCTACCCCATCTCCCAACTGCAGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCGGGTACGTCTGAGATTATTGACTTGACTAAATCTCCTACGTTTATCCAATTGTAGAACGATGGATGGATTTGGATTCTGCATATAATTGAGTTTGCCTACGACTTCGAATGACTTTTGCATTTTTCCATGAGGAGATAGTATCTATGTACTGCTACAGATAGCATTTTCAACCCTTTCAGAGGCAACGTGGGCTCAAGTTTGGTTGACCAAATAGAGAGGGGAACAACAACATGATGTTGTCAAGTTTTATATAATAATAGCCTTTCCTTCAAAAGCCATTTTAAGGGAATCAAGTGTGAAAATGGAATTCTGATGCTTGTATTTTAGAAGAGAACGTGGTATCAATTAAATTGTTTCAAACGATTGGGCTTAAAGTTGAACTATTCAACTACAGCCCCATTACATATACTAATAAAATTTTGGCAGATTTCCC

Coding sequence (CDS)

ATGAAGCTTGGTTGCATGGCATCCAAATGTTCCAAATTCCCCAATTTTGATAATTCCTTCAATTCACTCCCTTCATTTTACCCTAATCTCATTTCTTCCCCTTCCGATAATTCTCTCTCTTATTCACATCCGGAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTACAGGCCGACGATAATTCCGATACTCACTCCAAAGATTTGGATTCCAATTCCTCCTCCTCCTCCTCCTCCTCCAAGGTCTCATCGGTGTTCAGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGTCATTTGTTTTCCTCGTAGGAGAAGGCTTCCAATTGACGAGTTTTTCGGGCTAGGAGAGGAGAGAGAGATGGGGAAGAGGAAAGAGAAATCGGAAATCTCTAAGACCATGACTGTAACAGAGGAGAAGGAAGATGATGAAGTTGAAGATGAAGAAGAAAGAGGCAATGAAGTGAATGGGTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAACCCGAAACGCAGAATCAGACAGCACAATGGTGAAATTAGATGCGGCGCGTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTATGCGTTTATGGCTTCCCCACTAATGTCTCTGCCCTTCAGTTTGAATGGGCGTGGCAGCATCCTACTGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATACACAATGCTCACACTTCCTGCTTGGTGTAGTTTGAATATAACTGTAAACTACTTCTCAACAAAGTACATGAAGAATGCAGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCCCCCATCGATGAGCTTCCATGCTATTCCGAAGGAGATCAAAATGTGCTTGAAAATGAAGATGATTGGGAGTATAATAGAGAATGTGAAGAAATTTGTAGTTTTCGAGTATATGGATCAATCAAAGAAGTTTTAAATGAAGTTCCTAGTACAGATAGAAGATCTCATGAATTGCATGGATGCGATGAAGAACTCAAGGACAATGAACAAGTGCCACCTTCTTCATGTACTCCATCTTATATTGATGTGGGTATGTCTTATGACTTGCGTGGATGTGATGAAGAACTCGAGGCAGCTTCGTGTGCTCAGTCTTGTATTTTAGGTATATCCAGGACCGAAATTACCATTGACGATGGAGAGGAAGACCAATCAGAAGGGAGTGGTATGAACTTGCAGCAGCAAATTGGTATGAAGAATTTAACATCAGGAATAGCTTCTGAAATCAACAAAGTTTCGAGGTGTACTAATGGGCTTCCTCCTGTTGAGTATGAGGTTATAGATGTGTCTACCCCATCTCCCAACTGCAGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCGGGTACGTCTGAGATTATTGACTTGACTAAATCTCCTACGTTTATCCAATTGTAG

Protein sequence

MKLGCMASKCSKFPNFDNSFNSLPSFYPNLISSPSDNSLSYSHPEPLSPASSFSGTSNLTLNIYRPTIIPILTPKIWIPIPPPPPPPPRSHRCSGWWSIWPAAATCGVICFPRRRRLPIDEFFGLGEEREMGKRKEKSEISKTMTVTEEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVPSTDRRSHELHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDEELEAASCAQSCILGISRTEITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGLPPVEYEVIDVSTPSPNCRTSSHRFKRRVTSGTSEIIDLTKSPTFIQL

Homology

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BLAST of CcUC03G042560 vs. NCBI nr
Match: XP_038894793.1 (structure-specific endonuclease subunit SLX1 [Benincasa hispida])

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-187
Identity = 335/399 (83.96%), Postives = 355/399 (88.97%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVT-EEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGF 190
           M KRKE+ EISKTM V  EEKEDDE E+EEE  NEVNGFFSCYLLASACPR+KGHTYIGF
Sbjct: 1   MRKRKERPEISKTMAVAEEEKEDDEDEEEEEGSNEVNGFFSCYLLASACPRYKGHTYIGF 60

Query: 191 TVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVR 250
           TVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLC+YGFPTNVSALQFEWAWQHP ESLAVR
Sbjct: 61  TVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVR 120

Query: 251 SAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQV 310
           SAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLP+HMKVQV
Sbjct: 121 SAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPKHMKVQV 180

Query: 311 SPIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STD 370
           SPI+ELPCYSEGDQ VLENEDDWEYNRECEEICSFRVYGS+KEV NEVP        STD
Sbjct: 181 SPINELPCYSEGDQCVLENEDDWEYNRECEEICSFRVYGSMKEVSNEVPQKLMDHQASTD 240

Query: 371 RRSHELHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDEEL-----EAASCAQSCIL 430
            R  ELHGCD+E ++NEQVPPSSC PSYID GMSYDL GCDEEL     E ASCA SCI+
Sbjct: 241 GRPRELHGCDKEFENNEQVPPSSCNPSYIDAGMSYDLHGCDEELEEDEREPASCAPSCIV 300

Query: 431 -GISRTEITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGLPPVEYEVI 490
             ISRTEI IDDG+EDQ EG+GMNL+QQ+  KNL+SGIASEI+KVSRC   LPPVEYEVI
Sbjct: 301 TDISRTEIIIDDGDEDQIEGTGMNLEQQLCRKNLSSGIASEISKVSRCNIELPPVEYEVI 360

Query: 491 DVSTPSPNCRTSSHRFKRRVTSGTSEIIDLTKSPTFIQL 515
           DVSTPSP+CRT+SHR KR+VTSG SEIIDLTKSPTFIQL
Sbjct: 361 DVSTPSPDCRTNSHRVKRKVTSGRSEIIDLTKSPTFIQL 399

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BLAST of CcUC03G042560 vs. NCBI nr
Match: XP_008457313.1 (PREDICTED: uncharacterized protein LOC103497035 [Cucumis melo])

HSP 1 Score: 649.8 bits (1675), Expect = 1.9e-182
Identity = 334/403 (82.88%), Postives = 351/403 (87.10%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVT---EEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYI 190
           M KRKEK EI KTM      EEKEDD  ++EEERGN VNGFFSCYLLASACPRFKGHTYI
Sbjct: 1   MRKRKEKPEICKTMAAVVQDEEKEDD--DEEEERGNGVNGFFSCYLLASACPRFKGHTYI 60

Query: 191 GFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLA 250
           GFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLC+YGFPTNVSALQFEWAWQHP ESLA
Sbjct: 61  GFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLA 120

Query: 251 VRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKV 310
           VRSAAATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+MKNAAGCPSLPEHMKV
Sbjct: 121 VRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKV 180

Query: 311 QVSPIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------S 370
           QVSPIDELPCYSEGDQ VLENEDDWEY+RE EEICSF+VYGS+KEV NEVP         
Sbjct: 181 QVSPIDELPCYSEGDQGVLENEDDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTG 240

Query: 371 TDRRSHE-LHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDE-----ELEAASCAQS 430
           TD R    L GCD+EL+ NEQVPPSSCTPSY+DVGMSYDL  CDE     E EAASC QS
Sbjct: 241 TDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQS 300

Query: 431 C-ILGISRTEITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGL-PPVE 490
           C + G SRTEI IDDGEE+Q EGSGMNLQ+Q G KNLTSGIASEI+KVSRC+NGL P VE
Sbjct: 301 CTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVE 360

Query: 491 YEVIDVSTPSPNCRTSSHRFKRRVTSGTSEIIDLTKSPTFIQL 515
           YEVIDVSTPSP+CRTSSHRFKRRVTSG SE+IDLTKSPTFIQL
Sbjct: 361 YEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL 401

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BLAST of CcUC03G042560 vs. NCBI nr
Match: KAA0060004.1 (Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa] >TYJ97262.1 Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa])

HSP 1 Score: 637.5 bits (1643), Expect = 1.0e-178
Identity = 323/383 (84.33%), Postives = 340/383 (88.77%), Query Frame = 0


Query: 148 EEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCG 207
           EEKEDD  ++EEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCG
Sbjct: 8   EEKEDD--DEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCG 67

Query: 208 AWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKL 267
           AWRTKRKRPWEMVLC+YGFPTNVSALQFEWAWQHP ESLAVRSAAATFKSLSGVANKVKL
Sbjct: 68  AWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKL 127

Query: 268 AYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQNVLE 327
           AYTMLTLPAWC LNITVNYFSTK+MKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQ VLE
Sbjct: 128 AYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLE 187

Query: 328 NEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STDRRSHE-LHGCDEELKDNE 387
           NEDDWEY+RE EEICSF+VYGS+KEV NEVP         TD R    L GCD+EL+ NE
Sbjct: 188 NEDDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNE 247

Query: 388 QVPPSSCTPSYIDVGMSYDLRGCDE-----ELEAASCAQSC-ILGISRTEITIDDGEEDQ 447
           QVPPSSCTPSY+DVGMSYDL  CDE     E EAASC QSC + G SRTEI IDDGEE+Q
Sbjct: 248 QVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQ 307

Query: 448 SEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGL-PPVEYEVIDVSTPSPNCRTSSHRF 507
            EGSGMNLQ+Q G KNLTSGIASEI+KVSRC+NGL P VEYEVIDVSTPSP+CRTSSHRF
Sbjct: 308 FEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRF 367

Query: 508 KRRVTSGTSEIIDLTKSPTFIQL 515
           KRRVTSG SE+IDLTKSPTFIQL
Sbjct: 368 KRRVTSGKSEMIDLTKSPTFIQL 388

[Close]

BLAST of CcUC03G042560 vs. NCBI nr
Match: XP_004153269.1 (structure-specific endonuclease subunit SLX1 homolog [Cucumis sativus])

HSP 1 Score: 634.4 bits (1635), Expect = 8.4e-178
Identity = 330/400 (82.50%), Postives = 346/400 (86.50%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVTEEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFT 190
           M KRKEK EI K  T  EEKEDDE   EEERGNEVNGFFSCYLLASACPRFKGHTYIGFT
Sbjct: 1   MRKRKEKPEICK--TTDEEKEDDE---EEERGNEVNGFFSCYLLASACPRFKGHTYIGFT 60

Query: 191 VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRS 250
           VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLC+YGFPTNVSALQFEWAWQHP ESLAVRS
Sbjct: 61  VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRS 120

Query: 251 AAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVS 310
           AAATFKSLSGVANKVKLAYTMLTLPAW  LNITVNYFSTK+MKNAAGCPSLPEHMKVQVS
Sbjct: 121 AAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVS 180

Query: 311 PIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STD- 370
           PI+ELPCYSEGDQ++LENE DWEYNRE EEIC FRVYGS+KEV NEVP         TD 
Sbjct: 181 PINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDG 240

Query: 371 RRSHELHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDE-----ELEAASCAQSCIL 430
           R  H L GCD+EL+ NEQVPPSSCTPSYIDVGMSYDL  CDE     E EAASC QSCI+
Sbjct: 241 RPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIV 300

Query: 431 -GISRTEITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNG-LPPVEYEV 490
            G SRTEI IDD EE+Q EGS MNLQ+Q G +NLTSGIASEI+KVSR  NG +P VEYEV
Sbjct: 301 AGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEV 360

Query: 491 IDVSTPSPNCRTSSHRFKRRVTSGTSEIIDLTKSPTFIQL 515
           IDVSTPSP+CRTSSHRFKRRVTSG SE+IDLTKSPTFIQL
Sbjct: 361 IDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL 395

[Close]

BLAST of CcUC03G042560 vs. NCBI nr
Match: KAG7019098.1 (Structure-specific endonuclease subunit SLX1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.0 bits (1543), Expect = 3.9e-167
Identity = 304/392 (77.55%), Postives = 335/392 (85.46%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVTEEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFT 190
           M +RKEK EI KTM V EEK++D  +++EERGNE NGFFSCYLLASACPR+KGHTYIGFT
Sbjct: 1   MRRRKEKPEIPKTMAVAEEKKED--DEDEERGNEENGFFSCYLLASACPRYKGHTYIGFT 60

Query: 191 VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRS 250
           VNPKRRIRQHNGEIRCGAWRTKRKRPWEMV C+YGFPTNVSALQFEWAWQHP ESLAVRS
Sbjct: 61  VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRS 120

Query: 251 AAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVS 310
           AAATFKSLSG+ANK+KLAYTMLTLPAWCSLNITVNYFSTKYM NAAGCPSLP HM+VQVS
Sbjct: 121 AAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQVS 180

Query: 311 PIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STDR 370
           PIDELPCYSEGD+ VLENEDDWEYNRE EE+C  +V+  + EV NE+P         TD 
Sbjct: 181 PIDELPCYSEGDRCVLENEDDWEYNREYEEVCDSQVHDLMTEVPNEIPQTLMDYQTGTDG 240

Query: 371 RSHELHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDEELEAASCAQSCILGISRTE 430
           R HEL G DEEL+DNEQ+P SSCTPSYIDV +SYDLRGCDE+ + A CAQ CI+   RTE
Sbjct: 241 RPHELRGSDEELEDNEQMPHSSCTPSYIDVSVSYDLRGCDEQ-KPALCAQPCIVE-GRTE 300

Query: 431 ITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGLPPVEYEVIDVSTPSP 490
           I IDDGEE+  EGSG  LQQQ G KNL SGIA+EI++VS    GLPPVE EVIDVSTPSP
Sbjct: 301 IIIDDGEENHLEGSGTKLQQQPGRKNL-SGIATEISEVS---YGLPPVENEVIDVSTPSP 360

Query: 491 NCRTSSHRFKRRVTSGTSEIIDLTKSPTFIQL 515
           +CRTSS++FKRRV +G SEIIDLTKSPTFIQL
Sbjct: 361 DCRTSSYKFKRRVITGRSEIIDLTKSPTFIQL 384

[Close]

BLAST of CcUC03G042560 vs. ExPASy Swiss-Prot
Match: Q8BX32 (Structure-specific endonuclease subunit SLX1 OS=Mus musculus OX=10090 GN=Slx1b PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.8e-29
Identity = 65/162 (40.12%), Postives = 91/162 (56.17%), Query Frame = 0


Query: 168 FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCVYGF 227
           FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL ++GF
Sbjct: 10  FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLIIHGF 69

Query: 228 PTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNY 287
           P+ V+AL+FEWAWQHP  S  +       +S +  A  +++   ML +P W  L +T+ +
Sbjct: 70  PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRW 129

Query: 288 FSTKYMKNAAGCPSLPEHMKVQVSP------IDELPCYSEGD 323
               +      CP+ P HM +   P      + + P  SE D
Sbjct: 130 LRPDFRHEL--CPAPPAHMPIAFGPPPPQPLVPKRPAVSEAD 169

[Close]

BLAST of CcUC03G042560 vs. ExPASy Swiss-Prot
Match: Q5PQP5 (Structure-specific endonuclease subunit SLX1 OS=Rattus norvegicus OX=10116 GN=Slx1b PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.0e-28
Identity = 65/162 (40.12%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 168 FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCVYGF 227
           FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL ++GF
Sbjct: 10  FFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPWDMVLILHGF 69

Query: 228 PTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNY 287
           P+ V+AL+FEWAWQHP  S  +       +S +     +++   ML +P W  L +TV +
Sbjct: 70  PSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFTFHLRVLAHMLRVPPWVRLPLTVRW 129

Query: 288 FSTKYMKNAAGCPSLPEHMKVQVSP------IDELPCYSEGD 323
               +      CP+ P HM +   P      + + P  SE D
Sbjct: 130 LRPDFRHEL--CPAPPPHMPIAFGPPPPQPLVPKRPAASEAD 169

[Close]

BLAST of CcUC03G042560 vs. ExPASy Swiss-Prot
Match: Q32PI0 (Structure-specific endonuclease subunit SLX1 OS=Bos taurus OX=9913 GN=SLX1A PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.2e-27
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 168 FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCVYGF 227
           FF  YLL    PR +G  Y+GFTVNP RR++QHN G  + GAWRT  + PWEMVL V+GF
Sbjct: 6   FFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVLIVHGF 65

Query: 228 PTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNY 287
           P+ V+AL+FEWAWQHP  S  +       +  +  A  +++   ML  P W  L +T+ +
Sbjct: 66  PSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAFHLRVLAHMLRAPPWVRLPLTLRW 125

Query: 288 FSTKYMKNAAGCPSLPEHMKVQVSP 312
               + ++   CP  P HM +   P
Sbjct: 126 LRADFRQDL--CPPPPPHMPLAFGP 148

[Close]

BLAST of CcUC03G042560 vs. ExPASy Swiss-Prot
Match: A7STV9 (Structure-specific endonuclease subunit SLX1 homolog OS=Nematostella vectensis OX=45351 GN=v1g174298 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 8.3e-27
Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 166 NGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEI-RCGAWRTKRKRPWEMVLCVY 225
           +GF   YLL    P+FKGHTYIG+TVNP RRI+QHNG + + GA++T RK+PW M+L V+
Sbjct: 8   SGFHGVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPWNMILIVH 67

Query: 226 GFPTNVSALQFEWAWQHPTESLAVRSAAATFKSLS-GVANKVKLAYTMLTLPAWCSLNIT 285
           GFP ++ ALQFEWAWQ PT S  ++SAA   K     V    ++   +L +  W  L + 
Sbjct: 68  GFPNDIIALQFEWAWQKPTVSRRLKSAATKKKPRERPVQYCFRILSELLRVGPWNRLPLH 127

Query: 286 VNYFSTKYMKNAAGCPSLPEHMKVQVSPI 313
           + +   +Y          P HM V   P+
Sbjct: 128 IRWLMREYEMEFDPRCLPPFHMTVVYGPL 156

[Close]

BLAST of CcUC03G042560 vs. ExPASy Swiss-Prot
Match: Q0IH86 (Structure-specific endonuclease subunit slx1 OS=Xenopus laevis OX=8355 GN=slx1a PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.4e-26
Identity = 61/154 (39.61%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 164 EVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLC 223
           EV GF+  YLL    P++KG  YIGFTVNP+RRI+QHN G+ + GAW+T  + PW+MVL 
Sbjct: 4   EVEGFYGVYLLFCTNPKYKGRIYIGFTVNPERRIQQHNGGKHKGGAWKTSGRGPWDMVLI 63

Query: 224 VYGFPTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNI 283
           V+GFP +++AL+FEWAWQHP  S  +       K  S     + +   ML +  W  L +
Sbjct: 64  VHGFPNDIAALRFEWAWQHPHVSRRLTHVPRKTKKQSSFDFHLLVLCHMLRVAPWNRLPL 123

Query: 284 TVNYFSTKYMKNAAGCPSLPEHMKVQVSPIDELP 317
           T+ +   +Y +        P HM +    +   P
Sbjct: 124 TLRWLRQEYRRELPLLLQPPLHMPLAFGQVRARP 157

[Close]

BLAST of CcUC03G042560 vs. ExPASy TrEMBL
Match: A0A1S3C574 (Structure-specific endonuclease subunit SLX1 homolog OS=Cucumis melo OX=3656 GN=LOC103497035 PE=3 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 9.4e-183
Identity = 334/403 (82.88%), Postives = 351/403 (87.10%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVT---EEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYI 190
           M KRKEK EI KTM      EEKEDD  ++EEERGN VNGFFSCYLLASACPRFKGHTYI
Sbjct: 1   MRKRKEKPEICKTMAAVVQDEEKEDD--DEEEERGNGVNGFFSCYLLASACPRFKGHTYI 60

Query: 191 GFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLA 250
           GFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLC+YGFPTNVSALQFEWAWQHP ESLA
Sbjct: 61  GFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLA 120

Query: 251 VRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKV 310
           VRSAAATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+MKNAAGCPSLPEHMKV
Sbjct: 121 VRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKV 180

Query: 311 QVSPIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------S 370
           QVSPIDELPCYSEGDQ VLENEDDWEY+RE EEICSF+VYGS+KEV NEVP         
Sbjct: 181 QVSPIDELPCYSEGDQGVLENEDDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTG 240

Query: 371 TDRRSHE-LHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDE-----ELEAASCAQS 430
           TD R    L GCD+EL+ NEQVPPSSCTPSY+DVGMSYDL  CDE     E EAASC QS
Sbjct: 241 TDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQS 300

Query: 431 C-ILGISRTEITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGL-PPVE 490
           C + G SRTEI IDDGEE+Q EGSGMNLQ+Q G KNLTSGIASEI+KVSRC+NGL P VE
Sbjct: 301 CTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVE 360

Query: 491 YEVIDVSTPSPNCRTSSHRFKRRVTSGTSEIIDLTKSPTFIQL 515
           YEVIDVSTPSP+CRTSSHRFKRRVTSG SE+IDLTKSPTFIQL
Sbjct: 361 YEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL 401

[Close]

BLAST of CcUC03G042560 vs. ExPASy TrEMBL
Match: A0A5D3BBR0 (Structure-specific endonuclease subunit SLX1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00560 PE=3 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 4.8e-179
Identity = 323/383 (84.33%), Postives = 340/383 (88.77%), Query Frame = 0


Query: 148 EEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCG 207
           EEKEDD  ++EEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCG
Sbjct: 8   EEKEDD--DEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCG 67

Query: 208 AWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKL 267
           AWRTKRKRPWEMVLC+YGFPTNVSALQFEWAWQHP ESLAVRSAAATFKSLSGVANKVKL
Sbjct: 68  AWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKL 127

Query: 268 AYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQNVLE 327
           AYTMLTLPAWC LNITVNYFSTK+MKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQ VLE
Sbjct: 128 AYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLE 187

Query: 328 NEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STDRRSHE-LHGCDEELKDNE 387
           NEDDWEY+RE EEICSF+VYGS+KEV NEVP         TD R    L GCD+EL+ NE
Sbjct: 188 NEDDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNE 247

Query: 388 QVPPSSCTPSYIDVGMSYDLRGCDE-----ELEAASCAQSC-ILGISRTEITIDDGEEDQ 447
           QVPPSSCTPSY+DVGMSYDL  CDE     E EAASC QSC + G SRTEI IDDGEE+Q
Sbjct: 248 QVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQ 307

Query: 448 SEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGL-PPVEYEVIDVSTPSPNCRTSSHRF 507
            EGSGMNLQ+Q G KNLTSGIASEI+KVSRC+NGL P VEYEVIDVSTPSP+CRTSSHRF
Sbjct: 308 FEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRF 367

Query: 508 KRRVTSGTSEIIDLTKSPTFIQL 515
           KRRVTSG SE+IDLTKSPTFIQL
Sbjct: 368 KRRVTSGKSEMIDLTKSPTFIQL 388

[Close]

BLAST of CcUC03G042560 vs. ExPASy TrEMBL
Match: A0A0A0M0Y6 (Structure-specific endonuclease subunit SLX1 homolog OS=Cucumis sativus OX=3659 GN=Csa_1G533630 PE=3 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 4.1e-178
Identity = 330/400 (82.50%), Postives = 346/400 (86.50%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVTEEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFT 190
           M KRKEK EI K  T  EEKEDDE   EEERGNEVNGFFSCYLLASACPRFKGHTYIGFT
Sbjct: 1   MRKRKEKPEICK--TTDEEKEDDE---EEERGNEVNGFFSCYLLASACPRFKGHTYIGFT 60

Query: 191 VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRS 250
           VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLC+YGFPTNVSALQFEWAWQHP ESLAVRS
Sbjct: 61  VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRS 120

Query: 251 AAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVS 310
           AAATFKSLSGVANKVKLAYTMLTLPAW  LNITVNYFSTK+MKNAAGCPSLPEHMKVQVS
Sbjct: 121 AAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVS 180

Query: 311 PIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STD- 370
           PI+ELPCYSEGDQ++LENE DWEYNRE EEIC FRVYGS+KEV NEVP         TD 
Sbjct: 181 PINELPCYSEGDQDMLENEGDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDG 240

Query: 371 RRSHELHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDE-----ELEAASCAQSCIL 430
           R  H L GCD+EL+ NEQVPPSSCTPSYIDVGMSYDL  CDE     E EAASC QSCI+
Sbjct: 241 RPPHVLRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIV 300

Query: 431 -GISRTEITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNG-LPPVEYEV 490
            G SRTEI IDD EE+Q EGS MNLQ+Q G +NLTSGIASEI+KVSR  NG +P VEYEV
Sbjct: 301 AGTSRTEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEV 360

Query: 491 IDVSTPSPNCRTSSHRFKRRVTSGTSEIIDLTKSPTFIQL 515
           IDVSTPSP+CRTSSHRFKRRVTSG SE+IDLTKSPTFIQL
Sbjct: 361 IDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL 395

[Close]

BLAST of CcUC03G042560 vs. ExPASy TrEMBL
Match: A0A6J1I681 (Structure-specific endonuclease subunit SLX1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111469571 PE=3 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 5.9e-161
Identity = 290/373 (77.75%), Postives = 318/373 (85.25%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVTEEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFT 190
           M +RKEK EI KTM V EEK++D  +++EERGNE NGFFSCYLLASACPR+KGHTYIGFT
Sbjct: 1   MRRRKEKPEIPKTMAVAEEKKED--DEDEERGNEGNGFFSCYLLASACPRYKGHTYIGFT 60

Query: 191 VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRS 250
           VNPKRRIRQHNGEIRCGAWRTKRKRPWEMV C+YGFPTNVSALQFEWAWQHP ESLAVRS
Sbjct: 61  VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRS 120

Query: 251 AAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVS 310
           AAATFKSLSG+ANK+KLAYTMLTLPAWCSLNITVNYFSTKYM NAAGCPSLP HM+VQ+S
Sbjct: 121 AAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQIS 180

Query: 311 PIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STDR 370
           PIDELPCYSEGD+ VLENE+DWEYN+E EE+CS +V+G + EV NE+P         TD 
Sbjct: 181 PIDELPCYSEGDRCVLENENDWEYNKEYEEVCSSQVHGLMTEVPNEIPQTLMDYSTGTDG 240

Query: 371 RSHELHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDEELEAASCAQSCILGISRTE 430
           R HEL G DEEL DNEQVP SSCTPSYIDVG+SYDLRGCDE+ E A CAQ C +    TE
Sbjct: 241 RPHELRGSDEELDDNEQVPHSSCTPSYIDVGVSYDLRGCDEQ-EPALCAQPCTVE-GWTE 300

Query: 431 ITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGLPPVEYEVIDVSTPSP 490
           I IDDGEE+Q EGSGM LQQQ G K   SGIA+EI+KVS    GLPPVEYEVIDVSTPSP
Sbjct: 301 IIIDDGEENQLEGSGMKLQQQPGRKKNLSGIATEISKVS---YGLPPVEYEVIDVSTPSP 360

Query: 491 NCRTSSHRFKRRV 496
            CRTSSH+FKRR+
Sbjct: 361 VCRTSSHKFKRRL 366

[Close]

BLAST of CcUC03G042560 vs. ExPASy TrEMBL
Match: A0A6J1HZQ2 (Structure-specific endonuclease subunit SLX1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111469571 PE=3 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 5.9e-161
Identity = 290/373 (77.75%), Postives = 318/373 (85.25%), Query Frame = 0


Query: 131 MGKRKEKSEISKTMTVTEEKEDDEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFT 190
           M +RKEK EI KTM V EEK++D  +++EERGNE NGFFSCYLLASACPR+KGHTYIGFT
Sbjct: 1   MRRRKEKPEIPKTMAVAEEKKED--DEDEERGNEGNGFFSCYLLASACPRYKGHTYIGFT 60

Query: 191 VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRS 250
           VNPKRRIRQHNGEIRCGAWRTKRKRPWEMV C+YGFPTNVSALQFEWAWQHP ESLAVRS
Sbjct: 61  VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVFCIYGFPTNVSALQFEWAWQHPNESLAVRS 120

Query: 251 AAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVS 310
           AAATFKSLSG+ANK+KLAYTMLTLPAWCSLNITVNYFSTKYM NAAGCPSLP HM+VQ+S
Sbjct: 121 AAATFKSLSGIANKIKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPGHMRVQIS 180

Query: 311 PIDELPCYSEGDQNVLENEDDWEYNRECEEICSFRVYGSIKEVLNEVP--------STDR 370
           PIDELPCYSEGD+ VLENE+DWEYN+E EE+CS +V+G + EV NE+P         TD 
Sbjct: 181 PIDELPCYSEGDRCVLENENDWEYNKEYEEVCSSQVHGLMTEVPNEIPQTLMDYSTGTDG 240

Query: 371 RSHELHGCDEELKDNEQVPPSSCTPSYIDVGMSYDLRGCDEELEAASCAQSCILGISRTE 430
           R HEL G DEEL DNEQVP SSCTPSYIDVG+SYDLRGCDE+ E A CAQ C +    TE
Sbjct: 241 RPHELRGSDEELDDNEQVPHSSCTPSYIDVGVSYDLRGCDEQ-EPALCAQPCTVE-GWTE 300

Query: 431 ITIDDGEEDQSEGSGMNLQQQIGMKNLTSGIASEINKVSRCTNGLPPVEYEVIDVSTPSP 490
           I IDDGEE+Q EGSGM LQQQ G K   SGIA+EI+KVS    GLPPVEYEVIDVSTPSP
Sbjct: 301 IIIDDGEENQLEGSGMKLQQQPGRKKNLSGIATEISKVS---YGLPPVEYEVIDVSTPSP 360

Query: 491 NCRTSSHRFKRRV 496
            CRTSSH+FKRR+
Sbjct: 361 VCRTSSHKFKRRL 366

[Close]

BLAST of CcUC03G042560 vs. TAIR 10
Match: AT2G30350.2 (Excinuclease ABC, C subunit, N-terminal )

HSP 1 Score: 277.3 bits (708), Expect = 2.4e-74
Identity = 175/381 (45.93%), Postives = 222/381 (58.27%), Query Frame = 0


Query: 153 DEVEDEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTK 212
           D V ++   G +  GFF+CYLL S  PR KG TYIGFTVNP+RRIRQHNGEI  GAWRTK
Sbjct: 12  DPVGEDGVTGKDGKGFFACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHNGEITSGAWRTK 71

Query: 213 RKRPWEMVLCVYGFPTNVSALQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKLAYTML 272
           +KRPWEMVLC+YGFPTNVSALQFEWAWQHP ES+AVR AAA FKS SGVA+K+KL YTML
Sbjct: 72  KKRPWEMVLCIYGFPTNVSALQFEWAWQHPRESVAVREAAAAFKSFSGVASKIKLVYTML 131

Query: 273 TLPAWCSLNITVNYFSTKYMKNAAGCPSLPEHMKVQVSPIDELPCYSE-GDQNVLENEDD 332
            LPAW SLN+TVNYFS+KY  +    PSLP HMKVQV  +++L  +++  D +  E+E+ 
Sbjct: 132 NLPAWNSLNLTVNYFSSKYAHHGGKSPSLPLHMKVQVCAMEDLQYFTKVDDSSQPEDEES 191

Query: 333 WEYNRECEEICSFRVYGSIKEVLNEVPSTDRRSHE-----LHGCDEE----------LKD 392
            E N E ++          +   +   S+D R  E     +   DEE          L D
Sbjct: 192 PEVNEEDDDDDDDDSSNLSQPGNSNTSSSDDRHFEKAKEPVTVFDEEDRLANFSGFGLLD 251

Query: 393 NEQVPPSSCTPSYIDVGMSYDLRGCDEELEAA---SCAQSCILGISRTEITIDDGEEDQS 452
            E+        S+I VG    +R  ++E E       A     G+      ++  E++ S
Sbjct: 252 EEETVEDEV--SHITVG---SIRATEKEPETVFNDRLASFTCFGL------VEIVEDEVS 311

Query: 453 EGSGMNLQQQIGMKNLTSGIASEINK-VSRCTNGLPPVEYEVIDVSTPSPNCRTSSHRFK 512
            G+       IG    T  +  E  K  +  T+    V+ EVID+ TPSP+CR  S   +
Sbjct: 312 HGT-------IGS---TEAMEKECRKRRNHITSTTTEVDVEVIDLMTPSPSCRAGSSMKR 367

Query: 513 RRVTSGTSEIIDLTKSPTFIQ 514
           RRV    SE IDLT SP FI+
Sbjct: 372 RRV----SEFIDLTMSPNFIE 367

[Close]

BLAST of CcUC03G042560 vs. TAIR 10
Match: AT2G30350.1 (Excinuclease ABC, C subunit, N-terminal )

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-36
Identity = 117/301 (38.87%), Postives = 157/301 (52.16%), Query Frame = 0


Query: 233 LQFEWAWQHPTESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYM 292
           LQFEWAWQHP ES+AVR AAA FKS SGVA+K+KL YTML LPAW SLN+TVNYFS+KY 
Sbjct: 58  LQFEWAWQHPRESVAVREAAAAFKSFSGVASKIKLVYTMLNLPAWNSLNLTVNYFSSKYA 117

Query: 293 KNAAGCPSLPEHMKVQVSPIDELPCYSE-GDQNVLENEDDWEYNRECEEICSFRVYGSIK 352
            +    PSLP HMKVQV  +++L  +++  D +  E+E+  E N E ++          +
Sbjct: 118 HHGGKSPSLPLHMKVQVCAMEDLQYFTKVDDSSQPEDEESPEVNEEDDDDDDDDSSNLSQ 177

Query: 353 EVLNEVPSTDRRSHE-----LHGCDEE----------LKDNEQVPPSSCTPSYIDVGMSY 412
              +   S+D R  E     +   DEE          L D E+        S+I VG   
Sbjct: 178 PGNSNTSSSDDRHFEKAKEPVTVFDEEDRLANFSGFGLLDEEETVEDEV--SHITVG--- 237

Query: 413 DLRGCDEELEAA---SCAQSCILGISRTEITIDDGEEDQSEGSGMNLQQQIGMKNLTSGI 472
            +R  ++E E       A     G+      ++  E++ S G+       IG    T  +
Sbjct: 238 SIRATEKEPETVFNDRLASFTCFGL------VEIVEDEVSHGT-------IGS---TEAM 297

Query: 473 ASEINK-VSRCTNGLPPVEYEVIDVSTPSPNCRTSSHRFKRRVTSGTSEIIDLTKSPTFI 514
             E  K  +  T+    V+ EVID+ TPSP+CR  S   +RRV    SE IDLT SP FI
Sbjct: 298 EKECRKRRNHITSTTTEVDVEVIDLMTPSPSCRAGSSMKRRRV----SEFIDLTMSPNFI 333

[Close]

BLAST of CcUC03G042560 vs. TAIR 10
Match: AT5G43210.1 (Excinuclease ABC, C subunit, N-terminal )

HSP 1 Score: 57.4 bits (137), Expect = 4.0e-08
Identity = 32/81 (39.51%), Postives = 41/81 (50.62%), Query Frame = 0


Query: 169 FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCVYGFPT 228
           +S YL+ S     K  TY+G T +  RR++QHNGEIR GA  +   RPW     + GF  
Sbjct: 54  WSVYLILSTTEPIK--TYVGITTDFSRRLKQHNGEIRGGAKASSAGRPWLCACIITGFTC 113

Query: 229 NVSALQFEWAWQHPTESLAVR 250
              A  FE  W+  T  L  R
Sbjct: 114 LSQASSFESKWKIFTRKLPRR 132

The following BLAST results are available for this feature:

BLAST of CcUC03G042560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894793.1	1.2e-187	83.96	structure-specific endonuclease subunit SLX1 [Benincasa hispida]	[more]
XP_008457313.1	1.9e-182	82.88	PREDICTED: uncharacterized protein LOC103497035 [Cucumis melo]	[more]
KAA0060004.1	1.0e-178	84.33	Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa] >TYJ9726...	[more]
XP_004153269.1	8.4e-178	82.50	structure-specific endonuclease subunit SLX1 homolog [Cucumis sativus]	[more]
KAG7019098.1	3.9e-167	77.55	Structure-specific endonuclease subunit SLX1, partial [Cucurbita argyrosperma su...	[more]

BLAST of CcUC03G042560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BX32	6.8e-29	40.12	Structure-specific endonuclease subunit SLX1 OS=Mus musculus OX=10090 GN=Slx1b P...	[more]
Q5PQP5	2.0e-28	40.12	Structure-specific endonuclease subunit SLX1 OS=Rattus norvegicus OX=10116 GN=Sl...	[more]
Q32PI0	2.2e-27	42.07	Structure-specific endonuclease subunit SLX1 OS=Bos taurus OX=9913 GN=SLX1A PE=2...	[more]
A7STV9	8.3e-27	42.95	Structure-specific endonuclease subunit SLX1 homolog OS=Nematostella vectensis O...	[more]
Q0IH86	2.4e-26	39.61	Structure-specific endonuclease subunit slx1 OS=Xenopus laevis OX=8355 GN=slx1a ...	[more]

BLAST of CcUC03G042560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C574	9.4e-183	82.88	Structure-specific endonuclease subunit SLX1 homolog OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3BBR0	4.8e-179	84.33	Structure-specific endonuclease subunit SLX1 homolog OS=Cucumis melo var. makuwa...	[more]
A0A0A0M0Y6	4.1e-178	82.50	Structure-specific endonuclease subunit SLX1 homolog OS=Cucumis sativus OX=3659 ...	[more]
A0A6J1I681	5.9e-161	77.75	Structure-specific endonuclease subunit SLX1 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HZQ2	5.9e-161	77.75	Structure-specific endonuclease subunit SLX1 homolog OS=Cucurbita maxima OX=3661...	[more]

BLAST of CcUC03G042560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30350.2	2.4e-74	45.93	Excinuclease ABC, C subunit, N-terminal	[more]
AT2G30350.1	1.5e-36	38.87	Excinuclease ABC, C subunit, N-terminal	[more]
AT5G43210.1	4.0e-08	39.51	Excinuclease ABC, C subunit, N-terminal	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000305	GIY-YIG endonuclease	PFAM	PF01541	GIY-YIG	coord: 172..245 e-value: 2.3E-12 score: 47.0
IPR000305	GIY-YIG endonuclease	PROSITE	PS50164	GIY_YIG	coord: 167..249 score: 17.19891
IPR035901	GIY-YIG endonuclease superfamily	GENE3D	3.40.1440.10		coord: 167..267 e-value: 5.4E-24 score: 86.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..149
None	No IPR available	PANTHER	PTHR20208	STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1	coord: 150..398
None	No IPR available	PANTHER	PTHR20208:SF10	STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1	coord: 150..398
None	No IPR available	CDD	cd10455	GIY-YIG_SLX1	coord: 168..243 e-value: 2.37376E-52 score: 170.106
IPR027520	Structure-specific endonuclease subunit Slx1	HAMAP	MF_03100	Endonuc_su_Slx1	coord: 164..501 score: 24.121811

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC03G042560.1	CcUC03G042560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0051569	regulation of histone H3-K4 methylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006281	DNA repair
cellular_component	GO:0016593	Cdc73/Paf1 complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033557	Slx1-Slx4 complex
molecular_function	GO:0017108	5'-flap endonuclease activity
molecular_function	GO:0008821	crossover junction endodeoxyribonuclease activity
molecular_function	GO:0000993	RNA polymerase II complex binding