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CcUC02G041920 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTAAAATCTTTAGCCCTAAAATTTATCTTATTTATTTTATACCATTTCCCAATTACAAAGTGGACGCGGAAAATTGATACAATATGACGAGAGAACCCACCGTGGGCGAGGGAGGTTGTTCGGTCGTTTGAGAGTGATACGATTAATCTCTTTGGCGGCAAGATTTGGGAAGAGAGAGGGCGATGGCGTTGGAGCCACTTGTAAACGCATTCTCGGTGTTGGAGCTCGATGTTGAAGACAATCAAATTCCCTCTCTTTCTACTTCCTCCAAAGATGACGCTACTGCTTCTTCCCCTTCAAGAACAGGTTGGTTTATGACGTGATTTAAGGCGTTCTCCTTCTAAACTGTCATATTTTACAACTGCTAGGTTGCAGGTTCTGAGAACTTCAGGACTTCGATTGCCTTCCATTAGTCTCTTAGAGGCGCTAGGAATTAGGCCCAGATATTTTCTTCAGCTGTATTAGAAATTTGAAGTGATATAGTAAGAAACTATTCTTGTTTGTGTCTGCCTGGTTTTGATTTATGTAGCTTCGTGGATATTCTCAAAGCAGAAACCCCATGAATCTGAGTTGCCAGTTTGTACTTTTTTCAGTCTCAACTGAAAAATAATTGAAACAATATTGGTATATAAGATAGTTTCTTAATGTACTTTGGTCTTAGTTTTTTTCACTTAATATTTAGTTATTTTTCTTACTTGGGTTTTCTAATTGTTGGTTCTATGCCAAATTAATATTTCACAGAACTGTATATTATACTAATCCATCTTCTTAGCATGCATAACACCATTGACGTTTCACGCACAGTGAGTAGGATACAGTACTTCAAGTTTGGTTGATGGTTGTGAGCATTTCCTTTTCTATAGAAGTTCCTCTCCCATCTAATCCTTGAGAAAATGTATGATCAGGAAAAAGCAAGAAGGAAGTTAATATCTCTGGTGATATTCTGGCAGGAGAAAGACAGAAACAAGGTCAACCAGATATAGCTGCAGAAAACTACAAATTTCCTCTTGTTTGGATTGACCTGGAAATGACTGGTAACTAA GTAAAATCTTTAGCCCTAAAATTTATCTTATTTATTTTATACCATTTCCCAATTACAAAGTGGACGCGGAAAATTGATACAATATGACGAGAGAACCCACCGTGGGCGAGGGAGGTTGTTCGGTCGTTTGAGAGTGATACGATTAATCTCTTTGGCGGCAAGATTTGGGAAGAGAGAGGGCGATGGCGTTGGAGCCACTTGTAAACGCATTCTCGGTGTTGGAGCTCGATGTTGAAGACAATCAAATTCCCTCTCTTTCTACTTCCTCCAAAGATGACGCTACTGCTTCTTCCCCTTCAAGAACAGGAAAAAGCAAGAAGGAAGTTAATATCTCTGGTGATATTCTGGCAGGAGAAAGACAGAAACAAGGTCAACCAGATATAGCTGCAGAAAACTACAAATTTCCTCTTGTTTGGATTGACCTGGAAATGACTGGTAACTAA ATGGCGTTGGAGCCACTTGTAAACGCATTCTCGGTGTTGGAGCTCGATGTTGAAGACAATCAAATTCCCTCTCTTTCTACTTCCTCCAAAGATGACGCTACTGCTTCTTCCCCTTCAAGAACAGGAAAAAGCAAGAAGGAAGTTAATATCTCTGGTGATATTCTGGCAGGAGAAAGACAGAAACAAGGTCAACCAGATATAGCTGCAGAAAACTACAAATTTCCTCTTGTTTGGATTGACCTGGAAATGACTGGTAACTAA MALEPLVNAFSVLELDVEDNQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGN Homology
BLAST of CcUC02G041920 vs. NCBI nr
Match: XP_038902868.1 (oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclease isoform X1 [Benincasa hispida]) HSP 1 Score: 155.6 bits (392), Expect = 1.9e-34 Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0
BLAST of CcUC02G041920 vs. NCBI nr
Match: XP_004142177.1 (oligoribonuclease [Cucumis sativus] >KGN54054.1 hypothetical protein Csa_017987 [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 8.4e-30 Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of CcUC02G041920 vs. NCBI nr
Match: TYK21705.1 (oligoribonuclease [Cucumis melo var. makuwa]) HSP 1 Score: 136.7 bits (343), Expect = 9.2e-29 Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CcUC02G041920 vs. NCBI nr
Match: XP_008449845.1 (PREDICTED: oligoribonuclease [Cucumis melo] >XP_008449846.1 PREDICTED: oligoribonuclease [Cucumis melo] >XP_016900790.1 PREDICTED: oligoribonuclease [Cucumis melo]) HSP 1 Score: 136.7 bits (343), Expect = 9.2e-29 Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CcUC02G041920 vs. NCBI nr
Match: XP_022996309.1 (oligoribonuclease [Cucurbita maxima]) HSP 1 Score: 130.6 bits (327), Expect = 6.6e-27 Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of CcUC02G041920 vs. ExPASy TrEMBL
Match: A0A0A0KZ28 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.0e-30 Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of CcUC02G041920 vs. ExPASy TrEMBL
Match: A0A1S3BNX4 (oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.5e-29 Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CcUC02G041920 vs. ExPASy TrEMBL
Match: A0A5D3DDV3 (Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00720 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.5e-29 Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CcUC02G041920 vs. ExPASy TrEMBL
Match: A0A6J1K8C8 (oligoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111491575 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.2e-27 Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of CcUC02G041920 vs. ExPASy TrEMBL
Match: A0A6J1H2M6 (oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.5e-27 Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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