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CcUC02G041900 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTACAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGCGGCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGAGGATCGTGGAGAATCCCTTCCGTCGTCGTATTTGTCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAA ATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTACAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGCGGCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGAGGATCGTGGAGAATCCCTTCCGTCGTCGTATTTGTCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAA ATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTACAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGCGGCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGAGGATCGTGGAGAATCCCTTCCGTCGTCGTATTTGTCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAA MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKRGKRRHIAKKNAAAAGTAGASESKEWRNDNREKEDRGESLPSSYLSSEDMELEKEMWERFYGTGFWRTPSQRET Homology
BLAST of CcUC02G041900 vs. NCBI nr
Match: XP_038901895.1 (uncharacterized protein LOC120088573 [Benincasa hispida]) HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67 Identity = 136/152 (89.47%), Postives = 139/152 (91.45%), Query Frame = 0
BLAST of CcUC02G041900 vs. NCBI nr
Match: KAA0040078.1 (uncharacterized protein E6C27_scaffold366G00480 [Cucumis melo var. makuwa] >TYK21702.1 uncharacterized protein E5676_scaffold859G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65 Identity = 133/151 (88.08%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of CcUC02G041900 vs. NCBI nr
Match: XP_008449841.1 (PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo]) HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64 Identity = 132/151 (87.42%), Postives = 134/151 (88.74%), Query Frame = 0
BLAST of CcUC02G041900 vs. NCBI nr
Match: KAE8649474.1 (hypothetical protein Csa_018184 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 5.9e-63 Identity = 131/150 (87.33%), Postives = 134/150 (89.33%), Query Frame = 0
BLAST of CcUC02G041900 vs. NCBI nr
Match: KAG6570325.1 (hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010219.1 hypothetical protein SDJN02_27011, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 248.8 bits (634), Expect = 2.9e-62 Identity = 124/151 (82.12%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of CcUC02G041900 vs. ExPASy TrEMBL
Match: A0A5D3DDP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00690 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 6.2e-66 Identity = 133/151 (88.08%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of CcUC02G041900 vs. ExPASy TrEMBL
Match: A0A0A0L1Q3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279850 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 4.0e-65 Identity = 134/154 (87.01%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of CcUC02G041900 vs. ExPASy TrEMBL
Match: A0A1S3BMC5 (uncharacterized protein LOC103491601 OS=Cucumis melo OX=3656 GN=LOC103491601 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 5.2e-65 Identity = 132/151 (87.42%), Postives = 134/151 (88.74%), Query Frame = 0
BLAST of CcUC02G041900 vs. ExPASy TrEMBL
Match: A0A6J1FTZ9 (uncharacterized protein LOC111448127 OS=Cucurbita moschata OX=3662 GN=LOC111448127 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 9.2e-62 Identity = 125/151 (82.78%), Postives = 134/151 (88.74%), Query Frame = 0
BLAST of CcUC02G041900 vs. ExPASy TrEMBL
Match: A0A6J1JA30 (uncharacterized protein LOC111483938 OS=Cucurbita maxima OX=3661 GN=LOC111483938 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.6e-61 Identity = 124/153 (81.05%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of CcUC02G041900 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 4.4e-24 Identity = 65/160 (40.62%), Postives = 95/160 (59.38%), Query Frame = 0
BLAST of CcUC02G041900 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 91.3 bits (225), Expect = 7.3e-19 Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 0
BLAST of CcUC02G041900 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17 Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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